BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030819
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LIS2|RBG4_ARATH Glycine-rich RNA-binding protein 4, mitochondrial OS=Arabidopsis
thaliana GN=RBG4 PE=2 SV=1
Length = 136
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQG + + P+ + S +S+ +LFV GLS+ T + SL+ AF FG++ E
Sbjct: 11 LRQGVSQSSNGPVTSMLGSLRYMSS-----KLFVGGLSWGTDDSSLKQAFTSFGEVTEAT 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
++ D+ R RGF F+ ++ E+ + AI+ M GK L+GR I V +A R+
Sbjct: 66 VIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERS 115
>sp|Q43472|GRP_HORVU Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare
GN=blt801 PE=1 SV=1
Length = 161
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL + T + SL+NAF +G +++ ++ D+ R RGF F+ +A++E R+AIE
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+G+ LDGR I V A+SR
Sbjct: 67 MNGQDLDGRNITVNEAQSR 85
>sp|Q9FNR1|RBG3_ARATH Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis
thaliana GN=RBG3 PE=2 SV=1
Length = 309
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ G+++ EDSLR AF +G++V+ +++D+ R RGF F+ + + E +
Sbjct: 36 CMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAAS 95
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
AI+ + G+ L GRV+ V A R
Sbjct: 96 SAIQALDGRDLHGRVVKVNYANDR 119
>sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea
mays GN=RAB15 PE=1 SV=1
Length = 157
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
AIE M+GK LDGR I V A+S
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2
SV=1
Length = 168
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T+ ++L AF FGQ+++ ++ D+ R RGF F+ +++E+
Sbjct: 1 MAAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
AIE M+GK LDGR I V A+S
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1
Length = 169
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T E SL AF FG+LV+ ++ D+ R RGF F+ + E+ + AIEG
Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G+ LDGR I V A+
Sbjct: 69 MNGQDLDGRSITVNEAQ 85
>sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1
Length = 157
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T+++SL AF FG + + ++ D+ R RGF F+ + E+ R
Sbjct: 2 AEVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMR 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKS 156
AIEGM+G+ LDGR I V A+S
Sbjct: 62 DAIEGMNGQELDGRNITVNEAQS 84
>sp|Q28IQ9|CIRBP_XENTR Cold-inducible RNA-binding protein OS=Xenopus tropicalis GN=cirbp
PE=2 SV=1
Length = 166
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+C + +LFV GL+F T+E+SL F +GQ+ EV +V D+ + R RGF F+ + E++
Sbjct: 2 SC-DEGKLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDA 60
Query: 133 RRAIEGMHGKFLDGRVIFVEIA 154
+ A+ M+GK +DGR I V+ A
Sbjct: 61 KDAMMAMNGKSVDGRQIRVDQA 82
>sp|Q9PTX2|CIRBP_LITCT Cold-inducible RNA-binding protein OS=Lithobates catesbeiana
GN=cirbp PE=2 SV=1
Length = 164
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T E L F +GQ+ EV +V D+ R RGF F+ + E+++ A
Sbjct: 4 DEGKLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDA 63
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ GM+GK +DGR I V+ A
Sbjct: 64 MAGMNGKTVDGRQIRVDQA 82
>sp|Q42404|RU17_ARATH U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana
GN=RNU1 PE=1 SV=1
Length = 427
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRG-RGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFR 88
P P ++R+ + LR +G A L P+ +T P LFVS L++
Sbjct: 91 PKPEVELPSQKRE--RIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYE 148
Query: 89 TSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRV 148
+SE ++ F+ +G + V+LV D++ N+P+G+AF+ Y + + A + G+ +DGR
Sbjct: 149 SSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRR 208
Query: 149 IFVEIAKSRA 158
+ V++ + R
Sbjct: 209 VLVDVERGRT 218
>sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pongo abelii GN=CIRBP PE=2
SV=1
Length = 172
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo sapiens GN=CIRBP PE=1
SV=1
Length = 172
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>sp|Q9SVM8|RBG2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis
thaliana GN=RBG2 PE=1 SV=1
Length = 158
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ P+ + S +ST +LF+ GLS+ T + SLR+AF FG +V+
Sbjct: 11 LRQNISSNGNVPVTSMLGSLRLMST-----KLFIGGLSWGTDDASLRDAFAHFGDVVDAK 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+++D+ R RGF F+ + E + AI M GK L+GR I V A R
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114
>sp|Q03251|RBG8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=RBG8
PE=1 SV=1
Length = 169
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R FV GL++ T+++ L+ F FG +++ ++ D+ + R RGF F+ + E+ R
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AIE M+GK LDGRVI V A+
Sbjct: 63 AIEEMNGKELDGRVITVNEAQ 83
>sp|Q99069|GRP1_SORBI Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor
GN=GRP1 PE=2 SV=1
Length = 142
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 DSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFV 151
+SL +AF +G+++E +++D+ R RGF F+ ++TEE R AIEGM+GK LDGR I V
Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITV 60
Query: 152 EIAKS 156
A+S
Sbjct: 61 NEAQS 65
>sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus norvegicus GN=Cirbp
PE=2 SV=1
Length = 172
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus musculus GN=Cirbp PE=1
SV=1
Length = 172
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cricetulus griseus GN=CIRBP
PE=2 SV=1
Length = 172
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>sp|Q96E39|RMXL1_HUMAN RNA binding motif protein, X-linked-like-1 OS=Homo sapiens
GN=RBMXL1 PE=1 SV=1
Length = 390
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>sp|Q9DED4|CIRBB_XENLA Cold-inducible RNA-binding protein B OS=Xenopus laevis GN=cirbp-b
PE=1 SV=1
Length = 166
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GL+F T+E+SL F +GQ+ EV +V D+ R RGF F+ + ++++ A
Sbjct: 3 DEGKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ M+GK +DGR I V+ A
Sbjct: 63 MMAMNGKAVDGRQIRVDQA 81
>sp|O93235|CIRBA_XENLA Cold-inducible RNA-binding protein A OS=Xenopus laevis GN=cirbp-a
PE=1 SV=2
Length = 166
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GL+F T+ED L AF +G++ EV +V D+ R RGF F+ + ++++ A
Sbjct: 3 DEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ M+GK +DGR I V+ A
Sbjct: 63 MMAMNGKSVDGRQIRVDQA 81
>sp|Q03250|RBG7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=RBG7
PE=1 SV=1
Length = 176
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +++ ++ D+ R RGF F+ + E+
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
+ AIEGM+G+ LDGR I V A+
Sbjct: 61 AMKDAIEGMNGQDLDGRSITVNEAQ 85
>sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1
Length = 166
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + +L AF +G++++ ++ D+ R RGF F+ + E+ + AIEG
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G+ LDGR I V A+
Sbjct: 69 MNGQDLDGRSITVNEAQ 85
>sp|P0C8Z4|RMXL3_PANTR RNA-binding motif protein, X-linked-like-3 OS=Pan troglodytes
GN=RBMXL3 PE=4 SV=1
Length = 992
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 49/73 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL+ +T E +L+ F +G +++V L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFVGGLNLKTDEKALKAEFGKYGHIIKVFLIKDRKTNKSRGFAFVTFESPADAKAAARD 68
Query: 139 MHGKFLDGRVIFV 151
M+GK+LDG+ I V
Sbjct: 69 MNGKYLDGKAIMV 81
>sp|Q9C909|RBG5_ARATH Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis
thaliana GN=RBG5 PE=2 SV=1
Length = 289
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C +++FV G+S+ T E LR AF +G++V+ +++D+ R RGFAF+ + + EE+
Sbjct: 30 CMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEAS 89
Query: 134 RAIEGMHGKFLDGRVIFVEIA 154
A++ + G+ L GR I V A
Sbjct: 90 NAMQ-LDGQDLHGRRIRVNYA 109
>sp|Q5R1W5|SRSF2_PANTR Serine/arginine-rich splicing factor 2 OS=Pan troglodytes GN=SRSF2
PE=2 SV=3
Length = 221
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>sp|Q4R7F0|RBMX_MACFA RNA-binding motif protein, X chromosome OS=Macaca fascicularis
GN=RBMX PE=2 SV=1
Length = 391
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>sp|A5A6M3|RBMX_PANTR RNA-binding motif protein, X chromosome OS=Pan troglodytes GN=RBMX
PE=2 SV=1
Length = 391
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>sp|P38159|RBMX_HUMAN RNA-binding motif protein, X chromosome OS=Homo sapiens GN=RBMX
PE=1 SV=3
Length = 391
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>sp|Q4V898|RBMX_RAT RNA-binding motif protein, X chromosome OS=Rattus norvegicus
GN=Rbmx PE=1 SV=1
Length = 390
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>sp|Q9WV02|RBMX_MOUSE RNA-binding motif protein, X chromosome OS=Mus musculus GN=Rbmx
PE=1 SV=1
Length = 391
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>sp|P30352|SRSF2_CHICK Serine/arginine-rich splicing factor 2 OS=Gallus gallus GN=SRSF2
PE=2 SV=1
Length = 221
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>sp|Q91VM5|RMXL1_MOUSE RNA binding motif protein, X-linked-like-1 OS=Mus musculus
GN=Rbmxl1 PE=1 SV=1
Length = 388
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VE+ L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>sp|P39697|RT19_ARATH 40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana
GN=RPS19 PE=1 SV=2
Length = 212
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 55 RGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKI 114
+G P++ + S +ST +L++ GLS T E SL++AF F + E ++ +K+
Sbjct: 13 QGVNVPVSSMLGSLRYMST-----KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKV 67
Query: 115 ANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAEL 160
R RG+ F+ + +E+ + AI M+G+ L+G I V +AK L
Sbjct: 68 TGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWPSL 113
>sp|Q06A98|SRSF2_PIG Serine/arginine-rich splicing factor 2 OS=Sus scrofa GN=SRSF2 PE=2
SV=1
Length = 221
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>sp|Q6PDU1|SRSF2_RAT Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus
GN=Srsf2 PE=1 SV=3
Length = 221
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>sp|Q62093|SRSF2_MOUSE Serine/arginine-rich splicing factor 2 OS=Mus musculus GN=Srsf2
PE=1 SV=4
Length = 221
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>sp|Q01130|SRSF2_HUMAN Serine/arginine-rich splicing factor 2 OS=Homo sapiens GN=SRSF2
PE=1 SV=4
Length = 221
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>sp|Q3MHR5|SRSF2_BOVIN Serine/arginine-rich splicing factor 2 OS=Bos taurus GN=SRSF2 PE=2
SV=3
Length = 221
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>sp|Q8N7X1|RMXL3_HUMAN RNA-binding motif protein, X-linked-like-3 OS=Homo sapiens
GN=RBMXL3 PE=2 SV=2
Length = 1067
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 49/73 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ +T E +L+ F +G +++V L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPADAKAAARD 68
Query: 139 MHGKFLDGRVIFV 151
M+GK+LDG+ I V
Sbjct: 69 MNGKYLDGKAIMV 81
>sp|Q29RT0|RBMX_BOVIN RNA-binding motif protein, X chromosome OS=Bos taurus GN=RBMX PE=2
SV=1
Length = 396
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T E SL F +G++ EV L+ D+ N+ RGFAF+ + + +++ A+
Sbjct: 9 KLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I V A
Sbjct: 69 MNGKSLDGKAIKVAQA 84
>sp|O89086|RBM3_MOUSE Putative RNA-binding protein 3 OS=Mus musculus GN=Rbm3 PE=1 SV=1
Length = 153
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GL+F T E +L + F FG + EV +V D+ R RGF F+ + E +
Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRA 158
A+ M+G+ LDGR I V+ A A
Sbjct: 62 DAMRAMNGESLDGRQIRVDHAGKSA 86
>sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2
SV=1
Length = 169
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R FV GL++ T + L F FG++++ ++ D+ R RGF F+ + E+ +
Sbjct: 3 EVEYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKD 62
Query: 135 AIEGMHGKFLDGRVIFVEIAKS 156
AI+ M+GK LDGR I V A+S
Sbjct: 63 AIDEMNGKELDGRTITVNEAQS 84
>sp|Q66II8|RU17_XENTR U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus tropicalis
GN=snrnp70 PE=2 SV=1
Length = 471
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 67 SPHSLSTCQPKT--RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
PH+ Q LFV+ +++ T+E LR F+ +G + +++V +K + +PRG+AF+
Sbjct: 90 DPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFI 149
Query: 125 RYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
Y E + A + GK +DGR + V++ + R
Sbjct: 150 EYEHERDMHSAYKHADGKKIDGRRVLVDVERGRT 183
>sp|Q7ZWA3|RBMX_DANRE RNA-binding motif protein, X chromosome OS=Danio rerio GN=rbmx PE=2
SV=1
Length = 379
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ TSE L F FG++ EV L+ D+ N+ RGFAF+ Y +++ A
Sbjct: 9 KLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAARE 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKPLDGKPIKVEQA 84
>sp|P98179|RBM3_HUMAN Putative RNA-binding protein 3 OS=Homo sapiens GN=RBM3 PE=1 SV=1
Length = 157
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GL+F T E +L + F FG + EV +V D+ R RGF F+ + E +
Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRA 158
A+ M+G+ LDGR I V+ A A
Sbjct: 62 VAMRAMNGESLDGRQIRVDHAGKSA 86
>sp|D4AE41|RMXL1_RAT RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus
GN=Rbmxl1 PE=3 SV=1
Length = 388
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VE+ L+ D+ N+ RGFAF+ + + +++
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>sp|P84586|RMXRL_RAT RNA-binding motif protein, X chromosome retrogene-like OS=Rattus
norvegicus GN=Rbmxrtl PE=3 SV=1
Length = 388
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VE+ L+ D+ N+ RGFAF+ + + +++
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>sp|Q1RMR2|RU17_BOVIN U1 small nuclear ribonucleoprotein 70 kDa OS=Bos taurus GN=SNRNP70
PE=2 SV=1
Length = 439
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 67 SPHSLSTCQPKT--RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
PH+ Q LFV+ +++ T+E LR F+ +G + +++V K + +PRG+AF+
Sbjct: 90 DPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFI 149
Query: 125 RYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
Y E + A + GK +DGR + V++ + R
Sbjct: 150 EYEHERDMHSAYKHADGKKIDGRRVLVDVERGR 182
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris
PE=2 SV=1
Length = 273
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V L++ +D+L F G++V+ +V D+ + R RGF F+ Y++ EE AIE
Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 248
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQ 162
+ G L+GR I V A++R RQ
Sbjct: 249 LDGVDLNGRAIRVSPAEARPPRRQ 272
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P ++FV L F +L F+ G + V ++ DK+ R RGF F+ +++EE A
Sbjct: 85 PDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAA 144
Query: 136 IEGMHGKFLDGRVIFV 151
+ +G LDGR + V
Sbjct: 145 CQQFNGYELDGRALRV 160
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,576,683
Number of Sequences: 539616
Number of extensions: 2465280
Number of successful extensions: 8068
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 220
Number of HSP's that attempted gapping in prelim test: 6637
Number of HSP's gapped (non-prelim): 1453
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)