Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>030821
MLSLQSLSFLHNKPILSLERLNHYVNNPSPSVVARAVENNNSQNSKFEIDPEEARQALQR
LDQQLKSLSNKQISSPKIKAADVKITRGPGPAEQETLEISGSFLTNTTVALLIFTILYNV
LFYTVIKPSIDGPDDIPASAPDTTMATNKSPEAALVKELSPPPFLEDSVQR

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030821
        (171 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2059738 - symbol:AT2G01870 "AT2G01870" species...   162  5.0e-12   1


>TAIR|locus:2059738 [details] [associations]
            symbol:AT2G01870 "AT2G01870" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009535 "chloroplast thylakoid membrane"
            evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0000023
            "maltose metabolic process" evidence=RCA] [GO:0019252 "starch
            biosynthetic process" evidence=RCA] EMBL:CP002685 EMBL:AC007069
            GO:GO:0009535 UniGene:At.42461 UniGene:At.71241 EMBL:BT025731
            EMBL:AK175254 IPI:IPI00535900 PIR:B84430 RefSeq:NP_565278.1
            STRING:Q9SIS7 PRIDE:Q9SIS7 EnsemblPlants:AT2G01870.1 GeneID:814718
            KEGG:ath:AT2G01870 TAIR:At2g01870 PhylomeDB:Q9SIS7
            ArrayExpress:Q9SIS7 Genevestigator:Q9SIS7 Uniprot:Q9SIS7
        Length = 157

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 43/137 (31%), Positives = 71/137 (51%)

Query:     1 MLSLQSLSFLHNKPILSLERLNHYVNNPSPSVVARAVENNNSQNSKFEIDPEEXXXXXXX 60
             +L LQSL +  +  I+  ++  H +       + +A E  +S    F+ID ++       
Sbjct:     4 VLGLQSLKWYTHGRIMETKKKRHLMR------IVQATEREDS----FQIDRDKAREALKQ 53

Query:    61 XXXXXKSLSNKQISSPKIKAADVKITRGPGPAEQETLEISGSFLTNTTVALLIFTILYNV 120
                  +S ++++       ++DV  T       +E  EISGSFLT++   LL  T+ YN+
Sbjct:    54 LDQQIESQADEKPRIINKTSSDVVRTNNDPIMFEEPPEISGSFLTSSAFVLLALTLFYNI 113

Query:   121 LFYTVIKPSIDGPDDIP 137
             LF TVIKPS+DGP+ +P
Sbjct:   114 LFITVIKPSMDGPESVP 130


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.128   0.350    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      171       159   0.00091  106 3  11 23  0.45    32
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  498 (53 KB)
  Total size of DFA:  111 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.12u 0.19s 17.31t   Elapsed:  00:00:01
  Total cpu time:  17.12u 0.19s 17.31t   Elapsed:  00:00:01
  Start:  Thu May  9 23:11:41 2013   End:  Thu May  9 23:11:42 2013

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