Query 030827
Match_columns 171
No_of_seqs 134 out of 758
Neff 6.2
Searched_HMMs 13730
Date Mon Mar 25 07:48:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030827.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030827hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tqga_ a.24.10.3 (A:) Chemota 73.0 8.3 0.00061 24.6 7.4 66 23-88 6-71 (105)
2 d1ab4a_ e.11.1.1 (A:) DNA Gyra 67.7 28 0.002 28.6 11.3 50 71-125 436-485 (493)
3 d1i5na_ a.24.10.3 (A:) Chemota 64.9 7.5 0.00055 25.7 5.9 67 23-89 5-71 (128)
4 d1dkza1 a.8.4.1 (A:507-603) Dn 47.2 30 0.0022 21.8 9.4 61 28-89 30-90 (97)
5 d1wrda1 a.7.8.1 (A:215-307) Ta 44.4 16 0.0012 23.3 4.5 73 37-123 2-76 (93)
6 d1b3qa1 a.30.2.1 (A:293-354) H 42.0 24 0.0017 20.8 4.7 43 72-121 6-48 (62)
7 d1gqea_ e.38.1.1 (A:) Polypept 38.4 40 0.0029 26.6 7.0 15 111-125 94-108 (362)
8 d256ba_ a.24.3.1 (A:) Cytochro 37.6 37 0.0027 22.0 5.7 38 54-91 3-40 (106)
9 d1vp7a_ a.7.13.1 (A:) Exonucle 31.7 41 0.003 20.2 4.7 42 31-72 8-50 (68)
10 d1fxka_ a.2.5.1 (A:) Prefoldin 30.6 24 0.0018 22.7 3.7 43 75-125 61-103 (107)
11 d1x75a1 e.11.1.1 (A:363-494) D 29.2 76 0.0055 21.2 9.8 46 13-58 3-48 (132)
12 d1dgsa3 d.142.2.2 (A:1-314) Ad 27.8 1.1E+02 0.008 23.0 7.8 51 72-124 1-51 (314)
13 d1ez3a_ a.47.2.1 (A:) Syntaxin 26.4 43 0.0031 21.7 4.5 26 33-58 7-32 (124)
14 d1h7ca_ a.7.5.1 (A:) Tubulin c 23.6 77 0.0056 20.4 5.3 28 12-39 11-38 (103)
15 d1fpoa2 a.23.1.1 (A:77-171) HS 22.8 43 0.0031 21.0 3.7 30 6-35 60-89 (95)
16 d1u00a1 a.8.4.1 (A:504-615) Ch 21.4 96 0.007 19.7 9.0 61 28-89 30-90 (112)
No 1
>d1tqga_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Thermotoga maritima [TaxId: 2336]}
Probab=73.04 E-value=8.3 Score=24.64 Aligned_cols=66 Identities=17% Similarity=0.148 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHH
Q 030827 23 MYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLM 88 (171)
Q Consensus 23 ~~Ek~L~k~~~~l~nLe~~~~~IE~a~~n~~v~~alk~g~~aLK~~~~~~~id~Ve~lmdei~E~~ 88 (171)
+++--++.....+..++..+..++..-.+.+.++.+......||-.-.-++++.|.++.-.+++..
T Consensus 6 ~l~~Fl~Ea~e~l~~l~~~l~~le~~~~~~~~~~~l~R~~HTLKG~a~~~gl~~i~~lah~lE~~l 71 (105)
T d1tqga_ 6 YLGVFVDETKEYLQNLNDTLLELEKNPEDMELINEAFRALHTLKGMAGTMGFSSMAKLCHTLENIL 71 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCchhhcCHHHHHHHHHHHHHHH
Confidence 456667888888999999999998877788889999999999998888888888888887775543
No 2
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Probab=67.72 E-value=28 Score=28.58 Aligned_cols=50 Identities=22% Similarity=0.305 Sum_probs=37.1
Q ss_pred cCChhHHHHHHHHHHHHHHhHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhhc
Q 030827 71 TVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMG 125 (171)
Q Consensus 71 ~~~id~Ve~lmdei~E~~e~~~EI~eaLs~~~~~~~~~DedELe~EL~~Le~E~~ 125 (171)
.++-.+++++..+..+.....++...+|+..- .--+-+.+||.++.....
T Consensus 436 ~LT~le~~kL~~E~~~l~~ei~eL~~iL~s~~-----~l~~~i~~EL~~lk~kfg 485 (493)
T d1ab4a_ 436 KLTGLEHEKLLDEYKELLDQIAELLRILGSAD-----RLMEVIREELELVREQFG 485 (493)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHHHHHCHH-----HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH-----HHHHHHHHHHHHHHHHhC
Confidence 45557889999999999999999999887531 122455688888887764
No 3
>d1i5na_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Salmonella typhimurium [TaxId: 90371]}
Probab=64.93 E-value=7.5 Score=25.71 Aligned_cols=67 Identities=16% Similarity=0.154 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHH
Q 030827 23 MYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMD 89 (171)
Q Consensus 23 ~~Ek~L~k~~~~l~nLe~~~~~IE~a~~n~~v~~alk~g~~aLK~~~~~~~id~Ve~lmdei~E~~e 89 (171)
+++--++.....+.+++..+..++....+.+.++.+-.+...||-.-.-+++..|.++--.+.+...
T Consensus 5 ~~~~F~~Ea~e~l~~l~~~l~~le~~~~~~~~~~~l~R~~HTLKG~a~~~gl~~i~~lah~lE~~l~ 71 (128)
T d1i5na_ 5 FYQTFFDEADELLADMEQHLLDLVPESPDAEQLNAIFRAAHSIKGGAGTFGFTILQETTHLMENLLD 71 (128)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHCCTTSCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhhHHhhcChHHHHHHHHHHHHHHH
Confidence 5677778888888899998888887767788888888888888887777777777777666655443
No 4
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}
Probab=47.21 E-value=30 Score=21.80 Aligned_cols=61 Identities=16% Similarity=0.083 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHH
Q 030827 28 RDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMD 89 (171)
Q Consensus 28 L~k~~~~l~nLe~~~~~IE~a~~n~~v~~alk~g~~aLK~~~~~~~id~Ve~lmdei~E~~e 89 (171)
..+..+.++.++..+.... ..........++..-..|+.....-+.+.|...+++++....
T Consensus 30 rn~ae~~i~~~e~~l~e~~-~~l~~~~k~~i~~~i~~l~~~l~~~d~~~i~~~~~~L~~~~~ 90 (97)
T d1dkza1 30 RNQGDHLLHSTRKQVEEAG-DKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQ 90 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 3444444444444443321 223344445566666666666655666666666666654443
No 5
>d1wrda1 a.7.8.1 (A:215-307) Target of Myb protein 1, TOM1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.36 E-value=16 Score=23.29 Aligned_cols=73 Identities=14% Similarity=0.249 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChhHHHHHHHHHHHH-HHhHHHHHHHhccCCCCCCCCCHHHHH
Q 030827 37 NLDQVAFASEGIKDAQQTMTALKSANKELKGMMK-TVKIQDIDNLQDEMMDL-MDVSHEIQETLGRSYNVPDDIDEDELM 114 (171)
Q Consensus 37 nLe~~~~~IE~a~~n~~v~~alk~g~~aLK~~~~-~~~id~Ve~lmdei~E~-~e~~~EI~eaLs~~~~~~~~~DedELe 114 (171)
++..+...|+.++.|..++.-| |..+.. .-+..+- +++.++-+. ...+.-|...++.. +|+++.
T Consensus 2 ~~~kl~~eLe~v~~n~~lL~eM------L~~~~p~~~~~~d~-eli~eL~~~C~~~q~~i~~li~~~-------~dee~l 67 (93)
T d1wrda1 2 QIGKLRSELEMVSGNVRVMSEM------LTELVPTQAEPADL-ELLQELNRTCRAMQQRVLELIPQI-------ANEQLT 67 (93)
T ss_dssp THHHHHHHHHHHHHHHHHHHHH------HHHSCTTTCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHC-------CCHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHH------HHhcCCCCCCcchH-HHHHHHHHHHHHHHHHHHHHHhhc-------CCHHHH
Confidence 3556677777777777777654 334433 2344443 555554444 44455566666551 234566
Q ss_pred HHHHHHHHh
Q 030827 115 GELDALEAD 123 (171)
Q Consensus 115 ~EL~~Le~E 123 (171)
.+|=.+-.+
T Consensus 68 ~~lL~~ND~ 76 (93)
T d1wrda1 68 EELLIVNDN 76 (93)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555444333
No 6
>d1b3qa1 a.30.2.1 (A:293-354) Histidine kinase CheA {Thermotoga maritima [TaxId: 2336]}
Probab=41.95 E-value=24 Score=20.77 Aligned_cols=43 Identities=37% Similarity=0.443 Sum_probs=32.3
Q ss_pred CChhHHHHHHHHHHHHHHhHHHHHHHhccCCCCCCCCCHHHHHHHHHHHH
Q 030827 72 VKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALE 121 (171)
Q Consensus 72 ~~id~Ve~lmdei~E~~e~~~EI~eaLs~~~~~~~~~DedELe~EL~~Le 121 (171)
++++++|.+|+=+.|..=....+...... .++.+|.+.+..|.
T Consensus 6 Vd~~kLD~LmnlvGELvi~r~~L~~~~~~-------~~~~~l~~~~~~l~ 48 (62)
T d1b3qa1 6 VDIEKLDNLMDLMGELVIARSRILETLKK-------YNIKELDESLSHLS 48 (62)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHHHHTTSS-------CCCHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCcHHHHHHHHHHH
Confidence 58899999999999999998888776543 23456666665554
No 7
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=38.41 E-value=40 Score=26.61 Aligned_cols=15 Identities=47% Similarity=0.729 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHhhc
Q 030827 111 DELMGELDALEADMG 125 (171)
Q Consensus 111 dELe~EL~~Le~E~~ 125 (171)
+|++.+|+.|...+.
T Consensus 94 ~e~~~~l~~l~~~l~ 108 (362)
T d1gqea_ 94 NEAVAELDALEEKLA 108 (362)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhh
Confidence 456666666765543
No 8
>d256ba_ a.24.3.1 (A:) Cytochrome b562 {Escherichia coli [TaxId: 562]}
Probab=37.59 E-value=37 Score=21.97 Aligned_cols=38 Identities=13% Similarity=0.096 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHhH
Q 030827 54 TMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVS 91 (171)
Q Consensus 54 v~~alk~g~~aLK~~~~~~~id~Ve~lmdei~E~~e~~ 91 (171)
|-.+|+.=+.+++.+.+.-+++.|...|+++++...+.
T Consensus 3 l~~~M~~m~~a~k~~~~A~s~~Ei~~~m~~lr~a~~d~ 40 (106)
T d256ba_ 3 LEDNMETLNDNLKVIEKADNAAQVKDALTKMRAAALDA 40 (106)
T ss_dssp HHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 34566666677777777778888888888887776653
No 9
>d1vp7a_ a.7.13.1 (A:) Exonuclease VII small subunit XseB {Bordetella pertussis [TaxId: 520]}
Probab=31.68 E-value=41 Score=20.24 Aligned_cols=42 Identities=12% Similarity=0.056 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhccC
Q 030827 31 LYNQTFNLDQVAFASEGIKDAQ-QTMTALKSANKELKGMMKTV 72 (171)
Q Consensus 31 ~~~~l~nLe~~~~~IE~a~~n~-~v~~alk~g~~aLK~~~~~~ 72 (171)
+...+..|+.++.++|+-.... +.+..|+.|.+..+..++.+
T Consensus 8 fEe~l~~LE~IV~~LE~g~l~Leesl~~ye~G~~L~~~C~~~L 50 (68)
T d1vp7a_ 8 FETALAELESLVSAMENGTLPLEQSLSAYRRGVELARVCQDRL 50 (68)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456777888888888765554 46788999999999887665
No 10
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=30.65 E-value=24 Score=22.69 Aligned_cols=43 Identities=19% Similarity=0.411 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhhc
Q 030827 75 QDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMG 125 (171)
Q Consensus 75 d~Ve~lmdei~E~~e~~~EI~eaLs~~~~~~~~~DedELe~EL~~Le~E~~ 125 (171)
-++++++.++.+.++..+.--+.|.. -...++.+|+.+...+.
T Consensus 61 ~~~~e~~~~l~~~~e~l~~~i~~l~~--------q~~~l~~~l~~~~~~l~ 103 (107)
T d1fxka_ 61 VAKDELTEELQEKLETLQLREKTIER--------QEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHH
Confidence 46889999998888887766666655 24688899988887654
No 11
>d1x75a1 e.11.1.1 (A:363-494) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Probab=29.20 E-value=76 Score=21.23 Aligned_cols=46 Identities=20% Similarity=0.123 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030827 13 RAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTAL 58 (171)
Q Consensus 13 ~Al~~LkrKK~~Ek~L~k~~~~l~nLe~~~~~IE~a~~n~~v~~al 58 (171)
+..+-|++-+.--.-|+=+.-.+.|+..++.-|.++.+..+.-..+
T Consensus 3 Rt~f~L~Ka~~R~HILeGL~iAl~nID~VI~iIR~S~~~~eAk~~L 48 (132)
T d1x75a1 3 RTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTAL 48 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHTTSSSHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHcCCCcHHHHHHH
Confidence 4556666666655666667777777777777777766665544443
No 12
>d1dgsa3 d.142.2.2 (A:1-314) Adenylation domain of NAD+-dependent DNA ligase {Thermus filiformis [TaxId: 276]}
Probab=27.76 E-value=1.1e+02 Score=22.96 Aligned_cols=51 Identities=22% Similarity=0.253 Sum_probs=33.8
Q ss_pred CChhHHHHHHHHHHHHHHhHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 030827 72 VKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADM 124 (171)
Q Consensus 72 ~~id~Ve~lmdei~E~~e~~~EI~eaLs~~~~~~~~~DedELe~EL~~Le~E~ 124 (171)
|+-+++..-++++.+.+...++.==..+.+.- .|..-|.|.+||.+|+.+.
T Consensus 1 m~~~~~~~~i~~L~~~i~~~~~~YY~~~~p~I--sD~~YD~L~~eL~~le~~~ 51 (314)
T d1dgsa3 1 MTREEARRRINELRDLIRYHNYRYYVLADPEI--SDAEYDRLLRELKELEERF 51 (314)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCS--CSSSSHHHHHHHHHHTTSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CHHHHHHHHHHHHHHHHhC
Confidence 45566777777777777777644333344432 3567788999999998753
No 13
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=26.43 E-value=43 Score=21.66 Aligned_cols=26 Identities=4% Similarity=-0.010 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030827 33 NQTFNLDQVAFASEGIKDAQQTMTAL 58 (171)
Q Consensus 33 ~~l~nLe~~~~~IE~a~~n~~v~~al 58 (171)
.++..++.+...|.....+..-+..+
T Consensus 7 ~Ff~eV~~Ir~~I~~i~~~v~~i~~~ 32 (124)
T d1ez3a_ 7 EFFEQVEEIRGFIDKIAENVEEVKRK 32 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555444444444433
No 14
>d1h7ca_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.61 E-value=77 Score=20.45 Aligned_cols=28 Identities=18% Similarity=0.274 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030827 12 ARAMRVLKQKRMYEGQRDMLYNQTFNLD 39 (171)
Q Consensus 12 ~~Al~~LkrKK~~Ek~L~k~~~~l~nLe 39 (171)
...++++|-+.+|++.+..-...+.++.
T Consensus 11 gvvkRL~KE~~~Y~kE~~~q~~k~ek~k 38 (103)
T d1h7ca_ 11 GVVRRLVKERVMYEKEAKQQEEKIEKMR 38 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557899999999999887766655554
No 15
>d1fpoa2 a.23.1.1 (A:77-171) HSC20 (HSCB), C-terminal oligomerisation domain {Escherichia coli [TaxId: 562]}
Probab=22.81 E-value=43 Score=20.98 Aligned_cols=30 Identities=10% Similarity=0.034 Sum_probs=20.3
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030827 6 AQEAIKARAMRVLKQKRMYEGQRDMLYNQT 35 (171)
Q Consensus 6 ~~~g~K~~Al~~LkrKK~~Ek~L~k~~~~l 35 (171)
..+++-..|..++++-|++.+.+..+....
T Consensus 60 ~~~~d~~~A~~~~~kLkF~~kl~~ei~~~e 89 (95)
T d1fpoa2 60 LDNETWDAAADTCRKLRFLDKLRSSAEQLE 89 (95)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhccHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 345667778888888888777666655443
No 16
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]}
Probab=21.39 E-value=96 Score=19.69 Aligned_cols=61 Identities=8% Similarity=-0.002 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHH
Q 030827 28 RDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMD 89 (171)
Q Consensus 28 L~k~~~~l~nLe~~~~~IE~a~~n~~v~~alk~g~~aLK~~~~~~~id~Ve~lmdei~E~~e 89 (171)
.......+..++..+.... ......-...++.....|+.....=+.+.|+..++.+.....
T Consensus 30 ~n~ae~~i~~~e~~L~e~~-~~L~~~e~~~i~~~i~~l~~~l~~~d~~~I~~~~~~L~~~~~ 90 (112)
T d1u00a1 30 KVEAARVLESLHGALAADA-ALLSAAERQVIDDAAAHLSEVAQGDDVDAIEQAIKNVDKQTQ 90 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhH-hhCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 4444445555555544322 223445555666666666666666677888888877765443
Done!