BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030834
(170 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IIR|A Chain A, Crystal Structure Of Miraculin Like Protein From Seeds Of
Mu Koenigii
pdb|3IIR|B Chain B, Crystal Structure Of Miraculin Like Protein From Seeds Of
Mu Koenigii
Length = 190
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 80/156 (51%), Gaps = 38/156 (24%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ---EQH------- 79
DP+LDI G + A YY++ V G GGG R N+ CPLDV+Q + H
Sbjct: 1 DPLLDINGNVVEASRDYYLVSVIGGAGGGGLTLYRGRNELCPLDVIQLSPDLHKGTRLRF 60
Query: 80 -SFRN------------------------VWKLDNFDAILGQWFVKTGGIEGNLGPQTTI 114
++ N VW++DN+D G+WF+ TGG+EGN G QT
Sbjct: 61 AAYNNTSIIHEAVDLNVKFSTETSCNEPTVWRVDNYDPSRGKWFITTGGVEGNPGAQTLK 120
Query: 115 NWFRIEKF---YGDYKLVFCPLVCKFCKVLCIDVGI 147
NWF++E+ G Y++V CP VCK C LC DVG+
Sbjct: 121 NWFKLERVGTDQGTYEIVHCPSVCKSCVFLCNDVGV 156
>pdb|1AVA|C Chain C, Amy2BASI PROTEIN-Protein Complex From Barley Seed
pdb|1AVA|D Chain D, Amy2BASI PROTEIN-Protein Complex From Barley Seed
pdb|3BX1|D Chain D, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|3BX1|C Chain C, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
Length = 181
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 54/185 (29%)
Query: 27 ASPDPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQE---QH---- 79
A P PV D G +LRA + YY+L + GGGLT+A + + CPL V Q+ QH
Sbjct: 1 ADPPPVHDTDGHELRADANYYVLSANRAHGGGLTMA-PGHGRHCPLFVSQDPNGQHDGFP 59
Query: 80 -----------------------SFR--------NVWKLDNFDAILGQWFVKTGGIEGNL 108
SFR W +D+ + G+ V TG ++ +
Sbjct: 60 VRITPYGVAPSDKIIRLSTDVRISFRAYTTCLQSTEWHIDS-ELAAGRRHVITGPVK-DP 117
Query: 109 GPQTTINWFRIEKFYG----DYKLVFCPLVCKFCKVLCIDVGIF--VNGGVWHLALSDVT 162
P N FRIEK+ G +YKL+ C C D+G+F + GG W L ++
Sbjct: 118 SPSGRENAFRIEKYSGAEVHEYKLM-------SCGDWCQDLGVFRDLKGGAWFLGATEPY 170
Query: 163 FNVTF 167
V F
Sbjct: 171 HVVVF 175
>pdb|3S8J|A Chain A, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 2.6a Resolution
pdb|3S8J|B Chain B, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 2.6a Resolution
pdb|3S8K|A Chain A, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 1.7a Resolution
pdb|3S8K|B Chain B, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 1.7a Resolution
Length = 184
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 39/161 (24%)
Query: 28 SPDPVLDIAGKQLRAGSKYYILPVTKGRGGG-LTLAGRSNNKTCPLDVVQEQ-------- 78
+P P++DI GK + G Y+++ G GGG LT+ G N K CPL VVQ+
Sbjct: 2 APKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFDNGEPII 61
Query: 79 -HSFRNV--------------------------WKLDNFDAILGQWFVKTGGIEGNLGPQ 111
+ +NV WK+D F ++G W V GG +G G +
Sbjct: 62 FSAIKNVKDNIVRESVDLNVKFNITINCNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFE 120
Query: 112 TTINWFRIEK--FYGDYKLVFCPLVCKFCKVLCIDVGIFVN 150
+T + F+I+K YK FCP + + C +V IF +
Sbjct: 121 STHSMFKIKKAGLPFSYKFHFCPSYPRTRLIPCNNVDIFFD 161
>pdb|2QN4|A Chain A, Structure And Function Study Of Rice Bifunctional Alpha-
AmylaseSUBTILISIN INHIBITOR FROM ORYZA SATIVA
pdb|2QN4|B Chain B, Structure And Function Study Of Rice Bifunctional Alpha-
AmylaseSUBTILISIN INHIBITOR FROM ORYZA SATIVA
Length = 200
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 72/180 (40%), Gaps = 47/180 (26%)
Query: 26 NASPDPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQEQHSFRNVW 85
+A+P PV D G +L A YY+LP + G GGGLT+A R CPL V QE R +
Sbjct: 21 SAAPPPVYDTEGHELSADGSYYVLPASPGHGGGLTMAPRV--LPCPLLVAQETDERRKGF 78
Query: 86 KLD-----------------------NFDAIL-----GQWFVKTGGIEGN--------LG 109
+ F+A +W V + G +G
Sbjct: 79 PVRFTPWGGAAAPEDRTIRVSTDVRIRFNAATICVQSTEWHVGDEPLTGARRVVTGPLIG 138
Query: 110 PQTT--INWFRIEKFYGDYKLVFCPLVCKFCKVLCIDVGIFVNGGVWHLALSDVTFNVTF 167
P + N FR+EK+ G YKLV C+ C D+G+ +G L S V F
Sbjct: 139 PSPSGRENAFRVEKYGGGYKLV-------SCRDSCQDLGVSRDGARAWLGASQPPHVVVF 191
>pdb|2IWT|B Chain B, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 189
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 78/185 (42%), Gaps = 54/185 (29%)
Query: 27 ASPDPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQE---QH---- 79
A P PV D G +LRA + YY+L + GGGLT+A + + CPL V Q+ QH
Sbjct: 9 ADPPPVHDTDGHELRADANYYVLSANRAHGGGLTMA-PGHGRHCPLFVSQDPNGQHDGFP 67
Query: 80 -----------------------SFR--------NVWKLDNFDAILGQWFVKTGGIEGNL 108
SFR W +D+ + G+ V TG ++ +
Sbjct: 68 VRITPYGVAPSDKIIRLSTDVRISFRAYTTCLQSTEWHIDS-ELAAGRRHVITGPVK-DP 125
Query: 109 GPQTTINWFRIEKFYG----DYKLVFCPLVCKFCKVLCIDVGIF--VNGGVWHLALSDVT 162
P N FRIEK+ G +YKL+ C D+G+F + GG W L ++
Sbjct: 126 SPSGRENAFRIEKYSGAEVHEYKLM-------SSGDWCQDLGVFRDLKGGAWFLGATEPY 178
Query: 163 FNVTF 167
V F
Sbjct: 179 HVVVF 183
>pdb|3TC2|A Chain A, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|B Chain B, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|C Chain C, Crystal Structure Of Potato Serine Protease Inhibitor
Length = 187
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 67/181 (37%), Gaps = 48/181 (26%)
Query: 31 PVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPL---------DVVQEQHSF 81
PVLD+ GK+L Y I+ G GG G+S N P DV
Sbjct: 7 PVLDVTGKELDPRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGVFRYNSDVGPSGTPV 66
Query: 82 R---------------------------------NVWKLDNFDAILGQWFVKTGGIEGNL 108
R +WK+ ++DA LG ++TGG G
Sbjct: 67 RFIGSSSHFGQGIFEDELLNIQFAISTSKMCVSYTIWKVGDYDASLGTMLLETGGTIG-- 124
Query: 109 GPQTTINWFRIEKFYG-DYKLVFCPLVCKFCKVLCIDVGIFVNGGVWHLAL-SDVTFNVT 166
Q +WF+I K Y L++CP+ C+ VG+ G LAL D +V+
Sbjct: 125 --QADSSWFKIVKSSQFGYNLLYCPVTTSSDDQFCLKVGVVHQNGKRRLALVKDNPLDVS 182
Query: 167 F 167
F
Sbjct: 183 F 183
>pdb|1R8O|A Chain A, Crystal Structure Of An Unusual Kunitz-Type Trypsin
Inhibitor From Copaifera Langsdorffii Seeds
Length = 96
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 32 VLDIAGKQLR-AGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQEQHSFRN 83
++D GK + G++YYILP +G+GGGL LA +S + CPL VVQ N
Sbjct: 2 LVDTDGKPIENDGAEYYILPSVRGKGGGLVLA-KSGGEKCPLSVVQSPSELSN 53
>pdb|1BA7|A Chain A, Soybean Trypsin Inhibitor
pdb|1BA7|B Chain B, Soybean Trypsin Inhibitor
pdb|1AVU|A Chain A, Trypsin Inhibitor From Soybean (Sti)
Length = 181
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 61/157 (38%), Gaps = 40/157 (25%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQEQHSFRN------ 83
D VLD G L G YYIL GG A + N+ CPL VVQ ++
Sbjct: 1 DFVLDNEGNPLENGGTYYILSDITAFGG--IRAAPTGNERCPLTVVQSRNELDKGIGTII 58
Query: 84 ---------------VWKLDNFDAIL------GQWFVKTGGIEG---NLGPQTTI--NWF 117
K D+F I+ +W V EG +G WF
Sbjct: 59 SSPYRIRFIAEGHPLSLKFDSFAVIMLCVGIPTEWSVVEDLPEGPAVKIGENKDAMDGWF 118
Query: 118 RIEKFYGD----YKLVFCPLVCKFCKVLCIDVGIFVN 150
R+E+ D YKLVFCP + K C D+GI ++
Sbjct: 119 RLERVSDDEFNNYKLVFCPQQAEDDK--CGDIGISID 153
>pdb|1AVW|B Chain B, Complex Porcine Pancreatic TrypsinSOYBEAN TRYPSIN
Inhibitor, Orthorhombic Crystal Form
pdb|1AVX|B Chain B, Complex Porcine Pancreatic TrypsinSOYBEAN TRYPSIN
Inhibitor, Tetragonal Crystal Form
Length = 177
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 61/157 (38%), Gaps = 40/157 (25%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQEQHSFRN------ 83
D VLD G L G YYIL GG A + N+ CPL VVQ ++
Sbjct: 1 DFVLDNEGNPLENGGTYYILSDITAFGG--IRAAPTGNERCPLTVVQSRNELDKGIGTII 58
Query: 84 ---------------VWKLDNFDAIL------GQWFVKTGGIEG---NLGPQTTI--NWF 117
K D+F I+ +W V EG +G WF
Sbjct: 59 SSPYRIRFIAEGHPLSLKFDSFAVIMLCVGIPTEWSVVEDLPEGPAVKIGENKDAMDGWF 118
Query: 118 RIEKFYGD----YKLVFCPLVCKFCKVLCIDVGIFVN 150
R+E+ D YKLVFCP + K C D+GI ++
Sbjct: 119 RLERVSDDEFNNYKLVFCPQQAEDDK--CGDIGISID 153
>pdb|1TIE|A Chain A, Crystal Structure Of A Kunitz-Type Trypsin Inhibitor
From Erythrina Caffra Seeds
Length = 172
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 32 VLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQEQHSFRN 83
+LD G+ ++ G YY+LP +GGG+ LA ++ +TCPL VVQ + +
Sbjct: 2 LLDGNGEVVQNGGTYYLLPQVWAQGGGVQLA-KTGEETCPLTVVQSPNELSD 52
>pdb|2ET2|A Chain A, Crystal Structure Of An Asn To Ala Mutant Of Winged Bean
Chymotrypsin Inhibitor Protein
Length = 186
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
D ++D G + AG YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 5 DDLVDAEGNLVEAGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 50
>pdb|1R8N|A Chain A, The Crystal Structure Of The Kunitz (Sti) Type Inhibitor
From Seeds Of Delonix Regia
Length = 185
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQEQHSFRN------ 83
+ V DI G + GS+YYI+ G GGG GR+ CP+ ++QEQ +
Sbjct: 4 EKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRF 63
Query: 84 --------------------VWKLDNFDAI-------LGQWFVKTGGIEGNLGPQTTINW 116
V K D ++ G+ V GG E + + +
Sbjct: 64 SSPEEKQGKIYTDTELEIEFVEKPDCAESSKWVIVKDSGEARVAIGGSEDHPQGELVRGF 123
Query: 117 FRIEKFYG-DYKLVFCPLVCKFCKVLCIDVGIFVNG--GVWHLALSDVTFNVTFLN 169
F+IEK YKLVFCP K C D+GI G + + DV F V F+
Sbjct: 124 FKIEKLGSLAYKLVFCP---KSDSGSCSDIGINYEGRRSLVLKSSDDVPFRVVFVK 176
>pdb|2DRE|A Chain A, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|B Chain B, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|C Chain C, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|D Chain D, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
Length = 180
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQEQHSFR 82
+PV D G L+ ++Y+I P + GGGL A + CPL +V+ ++
Sbjct: 5 EPVKDTNGNPLKIETRYFIQPASDNNGGGLVPANVDLSHLCPLGIVRTSLPYQ 57
>pdb|2BEA|A Chain A, Crystal Structure Of Asn14 To Gly Mutant Of Wci
pdb|2BEA|B Chain B, Crystal Structure Of Asn14 To Gly Mutant Of Wci
Length = 186
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
D ++D G + G YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 5 DDLVDAEGNLVEGGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 50
>pdb|2BEB|A Chain A, X-Ray Structure Of Asn To Thr Mutant Of Winged Bean
Chymotrypsin Inhibitor
pdb|2BEB|B Chain B, X-Ray Structure Of Asn To Thr Mutant Of Winged Bean
Chymotrypsin Inhibitor
Length = 186
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
D ++D G + G YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 5 DDLVDAEGNLVETGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 50
>pdb|2ESU|A Chain A, Crystal Structure Of Asn To Gln Mutant Of Winged Bean
Chymotrypsin Inhibitor Protein
Length = 186
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
D ++D G + G YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 5 DDLVDAEGNLVEQGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 50
>pdb|1XG6|A Chain A, The Crystal Structure Of The P1 Mutant (Leu To Arg)of A
Winged Bean Chymotrypsin Inhibitor(Kunitz)solved At
2.15a Resolution
Length = 187
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 25 GNASPDPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
G+ D ++D G + G YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 1 GSHMDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 51
>pdb|1FMZ|A Chain A, Crystal Structure Of A Mutant Winged Bean Chymotrypsin
Inhibitor Protein, N14k
Length = 186
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
D ++D G + G YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 5 DDLVDAEGNLVEKGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 50
>pdb|3I29|B Chain B, Crystal Structure Of A Binary Complex Between An Mutant
Tryp Inhibitor With Bovine Trypsin
Length = 187
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 25 GNASPDPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
G+ D ++D G + G YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 1 GSHMDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 51
>pdb|3QYD|A Chain A, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
pdb|3QYD|C Chain C, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
pdb|3QYD|B Chain B, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
Length = 181
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 25 GNASPDPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
G+ D ++D G + G YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 1 GSHMDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 51
>pdb|3I2X|A Chain A, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
Rea Loop Of Eti On The Scaffold Of Wci
pdb|3I2X|B Chain B, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
Rea Loop Of Eti On The Scaffold Of Wci
Length = 187
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 25 GNASPDPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
G+ D ++D G + G YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 1 GSHMDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 51
>pdb|3I2A|A Chain A, Crystal Structure Of A Chimeric Trypsin Inhibitor
Protein St Wci(S)
pdb|3I2A|B Chain B, Crystal Structure Of A Chimeric Trypsin Inhibitor
Protein St Wci(S)
Length = 187
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 25 GNASPDPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
G+ D ++D G + G YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 1 GSHMDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 51
>pdb|1FN0|A Chain A, Structure Of A Mutant Winged Bean Chymotrypsin Inhibitor
Protein, N14d
Length = 186
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
D ++D G + G YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 5 DDLVDAEGNLVEDGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 50
>pdb|1EYL|A Chain A, Structure Of A Recombinant Winged Bean Chymotrypsin
Inhibitor
Length = 186
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
D ++D G + G YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 5 DDLVDAEGNLVENGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 50
>pdb|4WBC|A Chain A, 2.13 A Structure Of A Kunitz-Type Winged Bean
Chymotrypsin Inhibitor Protein
pdb|1WBC|A Chain A, Crystallization And Preliminary X-Ray Studies Of
Psophocarpin B1, A Chymotrypsin Inhibitor From Winged
Bean Seeds
pdb|2WBC|A Chain A, Refined Crystal Structure (2.3 Angstrom) Of A Winged
Bean Chymotrypsin Inhibitor And Location Of Its Second
Reactive Site
Length = 183
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
D ++D G + G YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 2 DDLVDAEGNLVENGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 47
>pdb|2QYI|B Chain B, Crystal Structure Of A Binary Complex Between An
Engineered Trypsin Inhibitor And Bovine Trypsin
pdb|2QYI|D Chain D, Crystal Structure Of A Binary Complex Between An
Engineered Trypsin Inhibitor And Bovine Trypsin
pdb|3VEQ|A Chain A, A Binary Complex Betwwen Bovine Pancreatic Trypsin And A
Engineered Mutant Trypsin Inhibitor
Length = 183
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQ 76
D ++D G + G YY+LP GGG+ A ++ N+ CPL VV+
Sbjct: 2 DDLVDAEGNLVENGGTYYLLPHIWAHGGGIETA-KTGNEPCPLTVVR 47
>pdb|3E8L|C Chain C, The Crystal Structure Of The Double-Headed Arrowhead
Protease Inhibitor A In Complex With Two Trypsins
Length = 185
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 114 INWF--RIEKFYGDYKLVFCPLVCKFCKVLCIDVGIFVNGGVWHLALSDVTFNVTF 167
+WF R + G YKL C C+FCK+ C +VG F G L + F V F
Sbjct: 128 FSWFEARSTEETGVYKLAACS--CEFCKIACPEVGSFNVNGRTLLGIGGEHFTVQF 181
>pdb|4AN7|B Chain B, Kunitz Type Trypsin Inhibitor Complex With Porcine Trypsin
Length = 185
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 117 FRIEKFYGDYKLVFCPLVCKFCKVLCIDVGIFVNG 151
F+I+KF DYKLV+C + + C+D+GI ++
Sbjct: 120 FQIKKFEEDYKLVYCSK-SESGERKCVDLGIKIDN 153
>pdb|4AN6|A Chain A, Kuntiz Type Trypsin Inhibitor With Factor Xa Inhibitory
Activity
pdb|4AN6|B Chain B, Kuntiz Type Trypsin Inhibitor With Factor Xa Inhibitory
Activity
Length = 185
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 117 FRIEKFYGDYKLVFCPLVCKFCKVLCIDVGIFVN 150
F+I+KF DYKLV+C + + C+D+GI ++
Sbjct: 120 FQIKKFEEDYKLVYCSK-SESGERKCVDLGIKID 152
>pdb|2GZB|A Chain A, Bauhinia Bauhinioides Cruzipain Inhibitor (Bbci)
pdb|2GZB|B Chain B, Bauhinia Bauhinioides Cruzipain Inhibitor (Bbci)
Length = 166
Score = 30.4 bits (67), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 32 VLDIAGKQLR-AGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQEQH 79
+LD G+ + A YY++PV+ G GG L LA + N+ P VV + H
Sbjct: 5 ILDTKGEPVSNAADAYYLVPVSHGEGG-LALA-KVGNEAEPKAVVLDPH 51
>pdb|3GG2|A Chain A, Crystal Structure Of Udp-Glucose 6-Dehydrogenase From
Porphyromonas Gingivalis Bound To Product
Udp-Glucuronate
pdb|3GG2|B Chain B, Crystal Structure Of Udp-Glucose 6-Dehydrogenase From
Porphyromonas Gingivalis Bound To Product
Udp-Glucuronate
pdb|3GG2|C Chain C, Crystal Structure Of Udp-Glucose 6-Dehydrogenase From
Porphyromonas Gingivalis Bound To Product
Udp-Glucuronate
pdb|3GG2|D Chain D, Crystal Structure Of Udp-Glucose 6-Dehydrogenase From
Porphyromonas Gingivalis Bound To Product
Udp-Glucuronate
Length = 450
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 12 LLFAFIATPLPVRGNASPDPVLDIAGKQLRAGSKYYILPVTKGR--GGGLTLAGRSNNKT 69
++F + TP G+A VLD A RA S+ YIL VTK G L ++
Sbjct: 81 IIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSR-YILIVTKSTVPVGSYRLIRKA---- 135
Query: 70 CPLDVVQEQHSFRNVWKLDNFDAILGQWFVKTG-GIEGNLGPQTTINWFRIEKFYGDYKL 128
+QE+ R V L +FD F+K G I+ + P + ++
Sbjct: 136 -----IQEELDKREV--LIDFDIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELITS 188
Query: 129 VFCPLVCKFCKVLCIDVG 146
++ P++ +VL +D+
Sbjct: 189 LYKPMLLNNFRVLFMDIA 206
>pdb|1WBA|A Chain A, Winged Bean Albumin 1
Length = 175
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 30 DPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSNNKTCPLDVVQEQHSFRNV 84
DPV D G +L KY I+ + G G + G N + PL +V+ S RN+
Sbjct: 3 DPVYDAEGNKLVNRGKYTIVSFSDGAGIDVVATGNENPED-PLSIVK---STRNI 53
>pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb)from Salmonella Enterica Serovar Typhimurium
pdb|1G1A|B Chain B, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb)from Salmonella Enterica Serovar Typhimurium
pdb|1G1A|C Chain C, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb)from Salmonella Enterica Serovar Typhimurium
pdb|1G1A|D Chain D, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb)from Salmonella Enterica Serovar Typhimurium
pdb|1KEU|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb) From Salmonella Enterica Serovar Typhimurium With
Dtdp-D-Glucose Bound
pdb|1KEU|B Chain B, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb) From Salmonella Enterica Serovar Typhimurium With
Dtdp-D-Glucose Bound
pdb|1KEW|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb) From Salmonella Enterica Serovar Typhimurium With
Thymidine Diphosphate Bound
pdb|1KEW|B Chain B, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb) From Salmonella Enterica Serovar Typhimurium With
Thymidine Diphosphate Bound
Length = 361
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 7 LTPLILLFAFIATPLPVRGNASPDPVLDIAGKQLRAGSKYYILPVTKGRGGGLTLAGRSN 66
L PL++L A PLP+ G D + D + A + + + VT+G+ G G N
Sbjct: 207 LIPLVILNALEGKPLPIYGKG--DQIRDWLYVEDHARALHMV--VTEGKAGETYNIGGHN 262
Query: 67 NKTCPLDVV 75
K LDVV
Sbjct: 263 EKKN-LDVV 270
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.145 0.470
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,513,937
Number of Sequences: 62578
Number of extensions: 238109
Number of successful extensions: 608
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 561
Number of HSP's gapped (non-prelim): 45
length of query: 170
length of database: 14,973,337
effective HSP length: 92
effective length of query: 78
effective length of database: 9,216,161
effective search space: 718860558
effective search space used: 718860558
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 48 (23.1 bits)