Your job contains 1 sequence.
>030836
MCSLQSQHFLNSPLLIFPKFNDNRKFHLNRTRNFGQRIGALSSVEEFLPNATRRKKDSLW
RGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQREETDEFIIGLPK
SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030836
(170 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1009023117 - symbol:AT1G12244 species:3702 "Ar... 491 6.9e-47 1
UNIPROTKB|P0A8I1 - symbol:yqgF species:83333 "Escherichia... 112 1.0e-06 1
UNIPROTKB|Q8EBZ8 - symbol:SO_3347 "Putative Holliday junc... 103 9.0e-06 1
TIGR_CMR|SO_3347 - symbol:SO_3347 "conserved hypothetical... 103 9.0e-06 1
UNIPROTKB|Q0BZU8 - symbol:HNE_2300 "Putative Holliday jun... 102 0.00013 1
UNIPROTKB|Q81LK2 - symbol:BAS4282 "Putative Holliday junc... 97 0.00022 1
TIGR_CMR|BA_4614 - symbol:BA_4614 "conserved hypothetical... 97 0.00022 1
UNIPROTKB|Q5LQY2 - symbol:SPO2350 "Putative Holliday junc... 99 0.00048 1
TIGR_CMR|SPO_2350 - symbol:SPO_2350 "conserved hypothetic... 99 0.00048 1
>TAIR|locus:1009023117 [details] [associations]
symbol:AT1G12244 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016788 "hydrolase
activity, acting on ester bonds" evidence=IEA] InterPro:IPR005227
InterPro:IPR006641 InterPro:IPR012337 Pfam:PF03652 SMART:SM00732
EMBL:CP002684 GO:GO:0005737 GO:GO:0006281 GO:GO:0003676
GO:GO:0006310 GO:GO:0016788 SUPFAM:SSF53098 KO:K07447
Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
IPI:IPI00657456 RefSeq:NP_001031028.1 UniGene:At.47869
ProteinModelPortal:F4IC62 SMR:F4IC62 EnsemblPlants:AT1G12244.1
GeneID:3766708 KEGG:ath:AT1G12244 OMA:SKSERQN PhylomeDB:F4IC62
Uniprot:F4IC62
Length = 254
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 107/176 (60%), Positives = 129/176 (73%)
Query: 1 MCSLQSQHFLNSPLLIF--PKFNDNRKFHLNRTRNFGQRI----GALSSVEEFLPNATRR 54
MCSL H +S + F K+ + H R G R A++S++E PNA RR
Sbjct: 18 MCSL---HSFSSVAISFRTQKYVNTSLVH--RLSPIGYRNYPLPWAVTSIDEIPPNAVRR 72
Query: 55 KKDSLWRGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQREETDEF 114
K D WRGGFSLGVDLGLSRTG+A+SKG+ V+PLTVLK RG+KLE +LLEIA+ EE DEF
Sbjct: 73 KIDRNWRGGFSLGVDLGLSRTGIAISKGYTVKPLTVLKSRGQKLETRLLEIAEEEEADEF 132
Query: 115 IIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINM 170
IIGLP+S DG ET QSNK+RSVAGRLA++AAERGWRVY+ DEH T++EA DRMI M
Sbjct: 133 IIGLPRSSDGKETIQSNKIRSVAGRLAIQAAERGWRVYVFDEHGTTSEASDRMIVM 188
>UNIPROTKB|P0A8I1 [details] [associations]
symbol:yqgF species:83333 "Escherichia coli K-12"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016788 "hydrolase activity,
acting on ester bonds" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0090305 "nucleic acid phosphodiester
bond hydrolysis" evidence=IEA] [GO:0031564 "transcription
antitermination" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA;ISS] [GO:0006310 "DNA recombination"
evidence=IEA] InterPro:IPR005227 InterPro:IPR006641
InterPro:IPR012337 Pfam:PF03652 SMART:SM00732 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006281 GO:GO:0003676 EMBL:U28377
GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518
GO:GO:0031564 eggNOG:COG0816 KO:K07447 Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 OMA:KNMNGTV ProtClustDB:PRK00109
HOGENOM:HOG000016954 PIR:D65080 RefSeq:NP_417424.1
RefSeq:YP_491148.1 PDB:1NMN PDB:1NU0 PDB:1OVQ PDBsum:1NMN
PDBsum:1NU0 PDBsum:1OVQ ProteinModelPortal:P0A8I1 SMR:P0A8I1
IntAct:P0A8I1 MINT:MINT-1317755 PRIDE:P0A8I1
EnsemblBacteria:EBESCT00000002163 EnsemblBacteria:EBESCT00000015039
GeneID:12930247 GeneID:947439 KEGG:ecj:Y75_p2879 KEGG:eco:b2949
PATRIC:32121308 EchoBASE:EB3075 EcoGene:EG13290
BioCyc:EcoCyc:G7525-MONOMER BioCyc:ECOL316407:JW2916-MONOMER
EvolutionaryTrace:P0A8I1 Genevestigator:P0A8I1 Uniprot:P0A8I1
Length = 138
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 33/104 (31%), Positives = 51/104 (49%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>UNIPROTKB|Q8EBZ8 [details] [associations]
symbol:SO_3347 "Putative Holliday junction resolvase"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
ProtClustDB:PRK00109 HOGENOM:HOG000016954 OMA:ESYFENQ
RefSeq:NP_718901.1 ProteinModelPortal:Q8EBZ8 SMR:Q8EBZ8
GeneID:1171029 KEGG:son:SO_3347 PATRIC:23526368 Uniprot:Q8EBZ8
Length = 141
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/108 (26%), Positives = 54/108 (50%)
Query: 66 LGVDLGLSRTGLALSKGFCVR--PLTVLK-LRGEKLELQLLEIAQREETDEFIIGLPKSW 122
LG D G G+A+ + PL +K + G ++ ++ Q + D ++GLP +
Sbjct: 7 LGFDFGTKSIGVAVGQQITASATPLLSIKAVDGIPNWEEIAKLIQEWQPDLVVVGLPLNM 66
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINM 170
DG+E +++ R A RL A+ G +++ DE T+ +A R+ +
Sbjct: 67 DGTEQEMTHRARKFANRLN---AKFGVKIFTQDERLTTTDAKARLFEL 111
>TIGR_CMR|SO_3347 [details] [associations]
symbol:SO_3347 "conserved hypothetical protein TIGR00250"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
ProtClustDB:PRK00109 HOGENOM:HOG000016954 OMA:ESYFENQ
RefSeq:NP_718901.1 ProteinModelPortal:Q8EBZ8 SMR:Q8EBZ8
GeneID:1171029 KEGG:son:SO_3347 PATRIC:23526368 Uniprot:Q8EBZ8
Length = 141
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/108 (26%), Positives = 54/108 (50%)
Query: 66 LGVDLGLSRTGLALSKGFCVR--PLTVLK-LRGEKLELQLLEIAQREETDEFIIGLPKSW 122
LG D G G+A+ + PL +K + G ++ ++ Q + D ++GLP +
Sbjct: 7 LGFDFGTKSIGVAVGQQITASATPLLSIKAVDGIPNWEEIAKLIQEWQPDLVVVGLPLNM 66
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINM 170
DG+E +++ R A RL A+ G +++ DE T+ +A R+ +
Sbjct: 67 DGTEQEMTHRARKFANRLN---AKFGVKIFTQDERLTTTDAKARLFEL 111
>UNIPROTKB|Q0BZU8 [details] [associations]
symbol:HNE_2300 "Putative Holliday junction resolvase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0004518 EMBL:CP000158 GenomeReviews:CP000158_GR
eggNOG:COG0816 HOGENOM:HOG000016953 KO:K07447 OMA:ERSIAMP
Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
RefSeq:YP_760995.1 ProteinModelPortal:Q0BZU8 STRING:Q0BZU8
GeneID:4289548 KEGG:hne:HNE_2300 PATRIC:32217441
BioCyc:HNEP228405:GI69-2322-MONOMER Uniprot:Q0BZU8
Length = 151
Score = 102 (41.0 bits), Expect = 0.00013, P = 0.00013
Identities = 38/111 (34%), Positives = 53/111 (47%)
Query: 61 RGGFSLGVDLGLSRTGLALSKGF--CVRPL-TVLKLR-GEKLELQLLEIAQREETDEFII 116
R G LG+D G + G+A + P+ T+LK + LE +LL I I+
Sbjct: 11 REGVLLGIDPGTATIGVAATDRIRMMASPVETILKKKLAPSLE-RLLHIYDERAAVGLIV 69
Query: 117 GLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167
GLP + DGS P++ VR++ L R V DE +SAEA D M
Sbjct: 70 GLPLNVDGSMGPRAQSVRTLVSSLL---KVRDLPVTFQDERYSSAEAGDIM 117
>UNIPROTKB|Q81LK2 [details] [associations]
symbol:BAS4282 "Putative Holliday junction resolvase"
species:1392 "Bacillus anthracis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR005227
InterPro:IPR006641 InterPro:IPR012337 Pfam:PF03652 SMART:SM00732
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006281 GO:GO:0003676 GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651
TIGRFAMs:TIGR00250 RefSeq:NP_846833.1 RefSeq:YP_021261.1
RefSeq:YP_030530.1 ProteinModelPortal:Q81LK2 SMR:Q81LK2
DNASU:1088650 EnsemblBacteria:EBBACT00000010456
EnsemblBacteria:EBBACT00000016012 EnsemblBacteria:EBBACT00000020110
GeneID:1088650 GeneID:2816247 GeneID:2853167 KEGG:ban:BA_4614
KEGG:bar:GBAA_4614 KEGG:bat:BAS4282 OMA:KNMNGTV
ProtClustDB:PRK00109 BioCyc:BANT260799:GJAJ-4338-MONOMER
BioCyc:BANT261594:GJ7F-4486-MONOMER Uniprot:Q81LK2
Length = 137
Score = 97 (39.2 bits), Expect = 0.00022, P = 0.00022
Identities = 29/108 (26%), Positives = 58/108 (53%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
LG+D+G G+A+S G+ + L +K+ E+ + ++ E+ ++ + D+ ++GLPK
Sbjct: 4 LGLDVGTKTVGVAISDEMGWTAQGLETIKINEERGQFGFDRISELVKQYDVDKIVVGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
+ +G+ P+ + A L R + V + DE R S A +R++
Sbjct: 64 NMNGTIGPRGEACQQFAENL--RELLQ-LDVVMWDE-RLSTMAAERLL 107
>TIGR_CMR|BA_4614 [details] [associations]
symbol:BA_4614 "conserved hypothetical protein TIGR00250"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0004518 eggNOG:COG0816 HOGENOM:HOG000016953 KO:K07447
Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
RefSeq:NP_846833.1 RefSeq:YP_021261.1 RefSeq:YP_030530.1
ProteinModelPortal:Q81LK2 SMR:Q81LK2 DNASU:1088650
EnsemblBacteria:EBBACT00000010456 EnsemblBacteria:EBBACT00000016012
EnsemblBacteria:EBBACT00000020110 GeneID:1088650 GeneID:2816247
GeneID:2853167 KEGG:ban:BA_4614 KEGG:bar:GBAA_4614 KEGG:bat:BAS4282
OMA:KNMNGTV ProtClustDB:PRK00109
BioCyc:BANT260799:GJAJ-4338-MONOMER
BioCyc:BANT261594:GJ7F-4486-MONOMER Uniprot:Q81LK2
Length = 137
Score = 97 (39.2 bits), Expect = 0.00022, P = 0.00022
Identities = 29/108 (26%), Positives = 58/108 (53%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
LG+D+G G+A+S G+ + L +K+ E+ + ++ E+ ++ + D+ ++GLPK
Sbjct: 4 LGLDVGTKTVGVAISDEMGWTAQGLETIKINEERGQFGFDRISELVKQYDVDKIVVGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
+ +G+ P+ + A L R + V + DE R S A +R++
Sbjct: 64 NMNGTIGPRGEACQQFAENL--RELLQ-LDVVMWDE-RLSTMAAERLL 107
>UNIPROTKB|Q5LQY2 [details] [associations]
symbol:SPO2350 "Putative Holliday junction resolvase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0003676 GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651
TIGRFAMs:TIGR00250 OMA:KNMNGTV ProtClustDB:PRK00109
RefSeq:YP_167573.1 ProteinModelPortal:Q5LQY2 GeneID:3194839
KEGG:sil:SPO2350 PATRIC:23378069 Uniprot:Q5LQY2
Length = 154
Score = 99 (39.9 bits), Expect = 0.00048, P = 0.00048
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 67 GVDLGLSRTGLALS---KGFCVRPLTVLKLRGEKLELQ-LLEIAQREETDEFIIGLPKSW 122
G+DLG G+A+S +G PL ++ + L+ LL I ++ E ++GLP++
Sbjct: 21 GLDLGDKTIGVAVSDRMRGVAT-PLETIRRKKFGLDASALLAIVEQREIAGIVLGLPRNM 79
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
DGSE P+ R+ A L+ R E + DE R S A ++ +
Sbjct: 80 DGSEGPRCQSTRAFARNLS-RLTEVA--ITFWDE-RLSTVAAEKAL 121
>TIGR_CMR|SPO_2350 [details] [associations]
symbol:SPO_2350 "conserved hypothetical protein TIGR00250"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0003676 GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651
TIGRFAMs:TIGR00250 OMA:KNMNGTV ProtClustDB:PRK00109
RefSeq:YP_167573.1 ProteinModelPortal:Q5LQY2 GeneID:3194839
KEGG:sil:SPO2350 PATRIC:23378069 Uniprot:Q5LQY2
Length = 154
Score = 99 (39.9 bits), Expect = 0.00048, P = 0.00048
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 67 GVDLGLSRTGLALS---KGFCVRPLTVLKLRGEKLELQ-LLEIAQREETDEFIIGLPKSW 122
G+DLG G+A+S +G PL ++ + L+ LL I ++ E ++GLP++
Sbjct: 21 GLDLGDKTIGVAVSDRMRGVAT-PLETIRRKKFGLDASALLAIVEQREIAGIVLGLPRNM 79
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
DGSE P+ R+ A L+ R E + DE R S A ++ +
Sbjct: 80 DGSEGPRCQSTRAFARNLS-RLTEVA--ITFWDE-RLSTVAAEKAL 121
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 170 170 0.00086 108 3 11 22 0.38 32
31 0.47 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 586 (62 KB)
Total size of DFA: 146 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.33u 0.10s 15.43t Elapsed: 00:00:01
Total cpu time: 15.33u 0.10s 15.43t Elapsed: 00:00:01
Start: Thu May 9 23:42:03 2013 End: Thu May 9 23:42:04 2013