BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030836
(170 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1SJC8|RUVX_NOCSJ Putative Holliday junction resolvase OS=Nocardioides sp. (strain
BAA-499 / JS614) GN=Noca_2408 PE=3 SV=1
Length = 156
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 60 WRGGFSLGVDLGLSRTGLALS--KGFCVRPL-TVLKLRGEKLELQLLEIAQREETD---E 113
R G +G+D G +R G+A S GF P+ TV + +G+ + + A+ +E E
Sbjct: 1 MRAGVRIGIDPGDARIGVARSDPSGFLATPVETVRRGKGDLARIGRILAAEEDEGATVLE 60
Query: 114 FIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT--SAEAVDR 166
++GLP+S G E P + KVR AGRLA R A V L+DE T SAEA+ R
Sbjct: 61 VVVGLPRSLSGREGPAAAKVREFAGRLAARVAP--VPVRLVDERMTTVSAEAMLR 113
>sp|Q2IQC1|RUVX_ANADE Putative Holliday junction resolvase OS=Anaeromyxobacter
dehalogenans (strain 2CP-C) GN=Adeh_1232 PE=3 SV=1
Length = 137
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 65 SLGVDLGLSRTGLALSKGF--CVRPLTVLKLRGEKLELQLL-EIAQREETDEFIIGLPKS 121
+LGVDLG R GLA++ R +T + RGE +L + E+A+ E ++GLP +
Sbjct: 3 TLGVDLGRVRIGLAVADEILRTARAVTTVVRRGEAEDLAAIAEVARDYEVTRAVVGLPLN 62
Query: 122 WDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167
DG+E P + R A RL A G V L DE +S EA R+
Sbjct: 63 MDGTEGPSARLARGFAPRL---EAALGVPVELFDERLSSFEAESRL 105
>sp|Q2RHZ7|RUVX_MOOTA Putative Holliday junction resolvase OS=Moorella thermoacetica
(strain ATCC 39073) GN=Moth_1640 PE=3 SV=1
Length = 140
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLELQLL-EIAQREETDEFIIGLPKSW 122
+G+D+G G+ALS G+ + LT ++ R +L L E+ +R +E ++GLP++
Sbjct: 4 MGLDVGTKTIGVALSDPLGWTAQGLTTIRRRNLAADLAALKELVRRYGVEELVVGLPRNM 63
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+GS PQ+ VR+ A L AE G V+ DE T+ A
Sbjct: 64 NGSLGPQAEAVRAFARHL---QAEVGLPVHFFDERLTTVAA 101
>sp|A5CCV6|RUVX_ORITB Putative Holliday junction resolvase OS=Orientia tsutsugamushi
(strain Boryong) GN=OTBS_0498 PE=3 SV=1
Length = 157
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 41 LSSVEEFLPNATRRKKDSLWRGGFSLGVDLGLSRTGLALS--KGFCVRPL-TVLKLRGEK 97
++S+ EFL A +K+ LG+D G + G+A+S + PL T+L ++
Sbjct: 3 INSISEFLQAADIKKQ--------ILGIDFGEKKVGVAISNIEHTVAMPLQTILATNQDR 54
Query: 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEH 157
+ ++ EIA +IGLP DG+ET Q+++V+ A +LA + ++L DE
Sbjct: 55 VN-KIQEIAVAYNIGAIVIGLPFKLDGTETSQTHRVKDFANKLANKLL---LPIFLCDER 110
Query: 158 RTSAEA 163
TS A
Sbjct: 111 LTSKAA 116
>sp|B4UH04|RUVX_ANASK Putative Holliday junction resolvase OS=Anaeromyxobacter sp.
(strain K) GN=AnaeK_2633 PE=3 SV=1
Length = 137
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 65 SLGVDLGLSRTGLALSKGF--CVRPLTVLKLRGEKLELQLL-EIAQREETDEFIIGLPKS 121
+LGVDLG R GLA++ R +T + R E +L + E+A+ E ++GLP +
Sbjct: 3 TLGVDLGRVRIGLAVADEILRTARAVTTVVRRTEAEDLSAIAEVARDYEVTRAVVGLPLN 62
Query: 122 WDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167
DG+E P + R A RL A G V L DE +S EA R+
Sbjct: 63 MDGTEGPSARLARGFAPRL---EAALGVPVELFDERLSSFEAESRL 105
>sp|B3CU37|RUVX_ORITI Putative Holliday junction resolvase OS=Orientia tsutsugamushi
(strain Ikeda) GN=OTT_1426 PE=3 SV=1
Length = 157
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Query: 41 LSSVEEFLPNATRRKKDSLWRGGFSLGVDLGLSRTGLALS--KGFCVRPL-TVLKLRGEK 97
++S+ EFL A +K+ LG+D G + G+A+S + PL T+ ++
Sbjct: 3 INSIIEFLQAADIKKQ--------ILGIDFGEKKVGVAISNIEHTVAMPLQTIFATNQDR 54
Query: 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEH 157
+ ++ EIA +IGLP DG+ET Q+++V+ A +LA + ++L DE
Sbjct: 55 IN-KIQEIAVAYNIGAIVIGLPFKLDGTETSQTHRVKDFANKLANKLL---LPIFLCDER 110
Query: 158 RTSAEA 163
TS A
Sbjct: 111 LTSKAA 116
>sp|B8JDZ9|RUVX_ANAD2 Putative Holliday junction resolvase OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=A2cp1_2727
PE=3 SV=1
Length = 137
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 65 SLGVDLGLSRTGLALSKGF--CVRPLTVLKLRGEKLELQLL-EIAQREETDEFIIGLPKS 121
+LGVDLG R GLA++ R +T + R E +L + E+A+ E ++GLP +
Sbjct: 3 TLGVDLGRVRIGLAVADEILRTARAVTTVVRRTEAEDLAAIAEVARDYEVTRAVVGLPLN 62
Query: 122 WDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167
DG+E P + R A RL A G V L DE +S EA R+
Sbjct: 63 MDGTEGPSARLARGFAPRL---EAALGVPVELFDERLSSFEAESRL 105
>sp|A7HDE0|RUVX_ANADF Putative Holliday junction resolvase OS=Anaeromyxobacter sp.
(strain Fw109-5) GN=Anae109_2535 PE=3 SV=1
Length = 137
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 66 LGVDLGLSRTGLALSKGF--CVRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
LG+DLG +R GLAL+ RPL+V++ R + +L + RE E ++GLP +
Sbjct: 4 LGLDLGRARIGLALADDVLRTARPLSVVRHRTREADLASIAATLREWEVGTAVVGLPLNM 63
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167
DGSE + R+ A LA RA G V L DE ++ EA R+
Sbjct: 64 DGSEGASARYARAFAEELA-RAT--GVPVELFDERLSTFEAESRL 105
>sp|A7MJR8|RUVX_CROS8 Putative Holliday junction resolvase OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=ESA_00393 PE=3 SV=1
Length = 138
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPLT +K + + L+E +E + D+ I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAIGQRVTATARPLTAIKAQNGNPDWTLIEKLLKEWQPDDVIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R+ A RL R G +V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARTFANRLHGRF---GIKVTLHDERLSTVEA 103
>sp|Q3SFS3|RUVX_THIDA Putative Holliday junction resolvase OS=Thiobacillus denitrificans
(strain ATCC 25259) GN=Tbd_2580 PE=3 SV=1
Length = 145
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 63 GFSLGVDLGLSRTGLA---LSKGFCVRPLTVLKLRGEKLELQLLE-IAQREETDEFIIGL 118
G L DLGL RTG+A L+ G PLTV++ + +E +A + F++GL
Sbjct: 8 GTVLAFDLGLKRTGVASGELAIGIA-HPLTVIQAESTDARMAAIEKLAAEWQPALFVLGL 66
Query: 119 PKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
P DGSE + R+ A RL R ER V+L+DE TSA A
Sbjct: 67 PTRADGSENEMTRVARNFARRLESR-FERP--VFLIDERLTSATA 108
>sp|A1AZC8|RUVX_PARDP Putative Holliday junction resolvase OS=Paracoccus denitrificans
(strain Pd 1222) GN=Pden_0510 PE=3 SV=1
Length = 158
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 57 DSLWRGGFSLGVDLGLSRTGLALSKGF--CVRPLTVLKLRGEKLELQ-LLEIAQREETDE 113
++L R G G+DLG G+A+S G PLTV++ + Q LL+I Q
Sbjct: 11 EALPRTGAVAGLDLGTKTIGVAVSDGLRGVASPLTVIRRTKFTADAQALLKIVQDRALVG 70
Query: 114 FIIGLPKSWDGSETPQSNKVRSVA 137
++GLP++ DGSE P++ R+ A
Sbjct: 71 LVLGLPRNMDGSEGPRAQSTRAFA 94
>sp|Q1JEI0|RUVX_STRPD Putative Holliday junction resolvase OS=Streptococcus pyogenes
serotype M2 (strain MGAS10270) GN=MGAS10270_Spy1864 PE=3
SV=1
Length = 139
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 9/108 (8%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
+G+D+G G+A+S GF + L ++K+ EK E +L E+ ++ + ++F+IGLPK
Sbjct: 4 MGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQYQVEQFVIGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
+ + + +P+ + + + G V+ DE T+ EA +RM+
Sbjct: 64 NMNNTNSPRVDASITYGNHI---EHLFGLPVHYQDERLTTVEA-ERML 107
>sp|C6C125|RUVX_DESAD Putative Holliday junction resolvase OS=Desulfovibrio salexigens
(strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763)
GN=Desal_1125 PE=3 SV=1
Length = 135
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVL-KLRGEKLELQLLEIAQREETDEFIIGLPKSW 122
L +D G R GLA+S P V+ + + + +LLEI + E+ + +IGLP S
Sbjct: 4 LSIDFGTKRVGLAISDPDQIFAFPYKVMERTTRDAMFSELLEIIENEKVGDIVIGLPLSL 63
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167
DG +T + +VR+ A L R ++L+DE +S A D +
Sbjct: 64 DGEDTLTTRQVRNFAASLERRV---DLPIHLVDERLSSIAAEDEL 105
>sp|Q5NPF1|RUVX_ZYMMO Putative Holliday junction resolvase OS=Zymomonas mobilis subsp.
mobilis (strain ATCC 31821 / ZM4 / CP4) GN=ZMO0785 PE=3
SV=2
Length = 163
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 56 KDSLWRGGFSLGVDLGLSRTGLAL--SKGFCVRPLTVLKLRGEKLELQLL-EIAQREETD 112
+++L R G G+D+G GLAL S+ P ++ + L+L+LL + ++++
Sbjct: 20 QEALPRKGRLAGLDVGTKTIGLALCDSQWIIASPAETIRRKKFTLDLELLRQFVEKQQVK 79
Query: 113 EFIIGLPKSWDGSETPQSNKVRSVAGRLA 141
+IGLP + DGS++P++ VR+ A +A
Sbjct: 80 GLVIGLPLNLDGSDSPRTQSVRAFAKNVA 108
>sp|P0DF53|RUVX_STRPQ Putative Holliday junction resolvase OS=Streptococcus pyogenes
serotype M3 (strain SSI-1) GN=SPs1795 PE=3 SV=1
Length = 139
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
+G+D+G G+A+S GF + L ++K+ EK E +L E+ ++ + ++F+IGLPK
Sbjct: 4 MGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQYQVEQFVIGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
+ + + P+ + + + G V+ DE T+ EA +RM+
Sbjct: 64 NMNNTNGPRVDASITYGNHI---EHLFGLPVHYQDERLTTVEA-ERML 107
>sp|Q48QX0|RUVX_STRPM Putative Holliday junction resolvase OS=Streptococcus pyogenes
serotype M28 (strain MGAS6180) GN=M28_Spy1780 PE=3 SV=1
Length = 139
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
+G+D+G G+A+S GF + L ++K+ EK E +L E+ ++ + ++F+IGLPK
Sbjct: 4 MGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQYQVEQFVIGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
+ + + P+ + + + G V+ DE T+ EA +RM+
Sbjct: 64 NMNNTNGPRVDASITYGNHI---EHLFGLPVHYQDERLTTVEA-ERML 107
>sp|A2RGU5|RUVX_STRPG Putative Holliday junction resolvase OS=Streptococcus pyogenes
serotype M5 (strain Manfredo) GN=SpyM51755 PE=3 SV=1
Length = 139
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
+G+D+G G+A+S GF + L ++K+ EK E +L E+ ++ + ++F+IGLPK
Sbjct: 4 MGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQYQVEQFVIGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
+ + + P+ + + + G V+ DE T+ EA +RM+
Sbjct: 64 NMNNTNGPRVDASITYGNHI---EHLFGLPVHYQDERLTTVEA-ERML 107
>sp|Q1J498|RUVX_STRPF Putative Holliday junction resolvase OS=Streptococcus pyogenes
serotype M4 (strain MGAS10750) GN=MGAS10750_Spy1888 PE=3
SV=1
Length = 139
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
+G+D+G G+A+S GF + L ++K+ EK E +L E+ ++ + ++F+IGLPK
Sbjct: 4 MGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQYQVEQFVIGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
+ + + P+ + + + G V+ DE T+ EA +RM+
Sbjct: 64 NMNNTNGPRVDASITYGNHI---EHLFGLPVHYQDERLTTVEA-ERML 107
>sp|Q1JJH9|RUVX_STRPC Putative Holliday junction resolvase OS=Streptococcus pyogenes
serotype M12 (strain MGAS9429) GN=MGAS9429_Spy1807 PE=3
SV=1
Length = 139
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
+G+D+G G+A+S GF + L ++K+ EK E +L E+ ++ + ++F+IGLPK
Sbjct: 4 MGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQYQVEQFVIGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
+ + + P+ + + + G V+ DE T+ EA +RM+
Sbjct: 64 NMNNTNGPRVDASITYGNHI---EHLFGLPVHYQDERLTTVEA-ERML 107
>sp|Q1J9D0|RUVX_STRPB Putative Holliday junction resolvase OS=Streptococcus pyogenes
serotype M12 (strain MGAS2096) GN=MGAS2096_Spy1829 PE=3
SV=1
Length = 139
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
+G+D+G G+A+S GF + L ++K+ EK E +L E+ ++ + ++F+IGLPK
Sbjct: 4 MGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQYQVEQFVIGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
+ + + P+ + + + G V+ DE T+ EA +RM+
Sbjct: 64 NMNNTNGPRVDASITYGNHI---EHLFGLPVHYQDERLTTVEA-ERML 107
>sp|P67495|RUVX_STRP8 Putative Holliday junction resolvase OS=Streptococcus pyogenes
serotype M18 (strain MGAS8232) GN=spyM18_2171 PE=3 SV=1
Length = 139
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
+G+D+G G+A+S GF + L ++K+ EK E +L E+ ++ + ++F+IGLPK
Sbjct: 4 MGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQYQVEQFVIGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
+ + + P+ + + + G V+ DE T+ EA +RM+
Sbjct: 64 NMNNTNGPRVDASITYGNHI---EHLFGLPVHYQDERLTTVEA-ERML 107
>sp|Q5X9I3|RUVX_STRP6 Putative Holliday junction resolvase OS=Streptococcus pyogenes
serotype M6 (strain ATCC BAA-946 / MGAS10394)
GN=M6_Spy1795 PE=3 SV=1
Length = 139
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
+G+D+G G+A+S GF + L ++K+ EK E +L E+ ++ + ++F+IGLPK
Sbjct: 4 MGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQYQVEQFVIGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
+ + + P+ + + + G V+ DE T+ EA +RM+
Sbjct: 64 NMNNTNGPRVDASITYGNHI---EHLFGLPVHYQDERLTTVEA-ERML 107
>sp|P0DF52|RUVX_STRP3 Putative Holliday junction resolvase OS=Streptococcus pyogenes
serotype M3 (strain ATCC BAA-595 / MGAS315)
GN=SpyM3_1797 PE=3 SV=1
Length = 139
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
+G+D+G G+A+S GF + L ++K+ EK E +L E+ ++ + ++F+IGLPK
Sbjct: 4 MGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQYQVEQFVIGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
+ + + P+ + + + G V+ DE T+ EA +RM+
Sbjct: 64 NMNNTNGPRVDASITYGNHI---EHLFGLPVHYQDERLTTVEA-ERML 107
>sp|B5XJ01|RUVX_STRPZ Putative Holliday junction resolvase OS=Streptococcus pyogenes
serotype M49 (strain NZ131) GN=Spy49_1750c PE=3 SV=1
Length = 139
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
+G+D+G G+A+S GF + L ++K+ EK E +L E+ ++ + ++F+IGLPK
Sbjct: 4 MGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQYQVEQFVIGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168
+ + + P+ + + + G V+ DE T+ EA +RM+
Sbjct: 64 NMNNTNGPRVDASITYGSHI---EHLFGLPVHYQDERLTTVEA-ERML 107
>sp|B1KXB5|RUVX_CLOBM Putative Holliday junction resolvase OS=Clostridium botulinum
(strain Loch Maree / Type A3) GN=CLK_1947 PE=3 SV=1
Length = 137
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLELQ-LLEIAQREETDEFIIGLPKSW 122
LG+D+G G+A+S GF + +T ++ + E +L+ + +I + E D + GLPK+
Sbjct: 4 LGLDIGDRTIGIAISDPLGFTAQGITTIRRKSEAYDLEEIKKICDKYEVDTIVSGLPKNM 63
Query: 123 DGSETPQSNKV 133
+G+ PQS KV
Sbjct: 64 NGTLGPQSEKV 74
>sp|A7GGE9|RUVX_CLOBL Putative Holliday junction resolvase OS=Clostridium botulinum
(strain Langeland / NCTC 10281 / Type F) GN=CLI_2625
PE=3 SV=1
Length = 137
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLELQ-LLEIAQREETDEFIIGLPKSW 122
LG+D+G G+A+S GF + +T ++ + E +L+ + +I + E D + GLPK+
Sbjct: 4 LGLDIGDRTIGIAISDPLGFTAQGITTIRRKSEAYDLEEIKKICDKYEVDTIVSGLPKNM 63
Query: 123 DGSETPQSNKV 133
+G+ PQS KV
Sbjct: 64 NGTLGPQSEKV 74
>sp|B1IJG5|RUVX_CLOBK Putative Holliday junction resolvase OS=Clostridium botulinum
(strain Okra / Type B1) GN=CLD_2003 PE=3 SV=1
Length = 137
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLELQ-LLEIAQREETDEFIIGLPKSW 122
LG+D+G G+A+S GF + +T ++ + E +L+ + +I + E D + GLPK+
Sbjct: 4 LGLDIGDRTIGIAISDPLGFTAQGITTIRRKSEAYDLEEIKKICDKYEVDTIVSGLPKNM 63
Query: 123 DGSETPQSNKV 133
+G+ PQS KV
Sbjct: 64 NGTLGPQSEKV 74
>sp|C1FTB8|RUVX_CLOBJ Putative Holliday junction resolvase OS=Clostridium botulinum
(strain Kyoto / Type A2) GN=CLM_2869 PE=3 SV=1
Length = 137
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLELQ-LLEIAQREETDEFIIGLPKSW 122
LG+D+G G+A+S GF + +T ++ + E +L+ + +I + E D + GLPK+
Sbjct: 4 LGLDIGDRTIGIAISDPLGFTAQGITTIRRKSEAYDLEEIKKICDKYEVDTIVSGLPKNM 63
Query: 123 DGSETPQSNKV 133
+G+ PQS KV
Sbjct: 64 NGTLGPQSEKV 74
>sp|A5I4Z3|RUVX_CLOBH Putative Holliday junction resolvase OS=Clostridium botulinum
(strain Hall / ATCC 3502 / NCTC 13319 / Type A)
GN=CBO2562 PE=3 SV=1
Length = 137
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLELQ-LLEIAQREETDEFIIGLPKSW 122
LG+D+G G+A+S GF + +T ++ + E +L+ + +I + E D + GLPK+
Sbjct: 4 LGLDIGDRTIGIAISDPLGFTAQGITTIRRKSEAYDLEEIKKICDKYEVDTIVSGLPKNM 63
Query: 123 DGSETPQSNKV 133
+G+ PQS KV
Sbjct: 64 NGTLGPQSEKV 74
>sp|C3L148|RUVX_CLOB6 Putative Holliday junction resolvase OS=Clostridium botulinum
(strain 657 / Type Ba4) GN=CLJ_B2792 PE=3 SV=1
Length = 137
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLELQ-LLEIAQREETDEFIIGLPKSW 122
LG+D+G G+A+S GF + +T ++ + E +L+ + +I + E D + GLPK+
Sbjct: 4 LGLDIGDRTIGIAISDPLGFTAQGITTIRRKSEAYDLEEIKKICDKYEVDTIVSGLPKNM 63
Query: 123 DGSETPQSNKV 133
+G+ PQS KV
Sbjct: 64 NGTLGPQSEKV 74
>sp|A7FWJ3|RUVX_CLOB1 Putative Holliday junction resolvase OS=Clostridium botulinum
(strain ATCC 19397 / Type A) GN=CLB_2503 PE=3 SV=1
Length = 137
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLELQ-LLEIAQREETDEFIIGLPKSW 122
LG+D+G G+A+S GF + +T ++ + E +L+ + +I + E D + GLPK+
Sbjct: 4 LGLDIGDRTIGIAISDPLGFTAQGITTIRRKSEAYDLEEIKKICDKYEVDTIVSGLPKNM 63
Query: 123 DGSETPQSNKV 133
+G+ PQS KV
Sbjct: 64 NGTLGPQSEKV 74
>sp|Q99XP4|RUVX_STRP1 Putative Holliday junction resolvase OS=Streptococcus pyogenes
serotype M1 GN=SPy_2113 PE=3 SV=1
Length = 139
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
+G+D+G G+A+S GF + L ++K+ EK E +L E+ ++ + ++F+IGLPK
Sbjct: 4 MGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVKQYQVEQFVIGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ + + P+ + + + G V+ DE T+ EA
Sbjct: 64 NMNNTNGPRVDASITYGNHI---EHLFGLPVHYQDERLTTVEA 103
>sp|B7NI12|RUVX_ECO7I Putative Holliday junction resolvase OS=Escherichia coli O7:K1
(strain IAI39 / ExPEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GIEVKLHDERLSTVEA 103
>sp|B5YQE7|RUVX_ECO5E Putative Holliday junction resolvase OS=Escherichia coli O157:H7
(strain EC4115 / EHEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>sp|Q8XCV0|RUVX_ECO57 Putative Holliday junction resolvase OS=Escherichia coli O157:H7
GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>sp|Q3YXS2|RUVX_SHISS Putative Holliday junction resolvase OS=Shigella sonnei (strain
Ss046) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>sp|Q83JS4|RUVX_SHIFL Putative Holliday junction resolvase OS=Shigella flexneri GN=yqgF
PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>sp|Q0T0U3|RUVX_SHIF8 Putative Holliday junction resolvase OS=Shigella flexneri serotype
5b (strain 8401) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>sp|Q31WL1|RUVX_SHIBS Putative Holliday junction resolvase OS=Shigella boydii serotype 4
(strain Sb227) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>sp|B2U0W9|RUVX_SHIB3 Putative Holliday junction resolvase OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>sp|B7LPR6|RUVX_ESCF3 Putative Holliday junction resolvase OS=Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=yqgF
PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>sp|B1LDF8|RUVX_ECOSM Putative Holliday junction resolvase OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>sp|B7N7K2|RUVX_ECOLU Putative Holliday junction resolvase OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>sp|B7LYX9|RUVX_ECO8A Putative Holliday junction resolvase OS=Escherichia coli O8 (strain
IAI1) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>sp|B7UHZ6|RUVX_ECO27 Putative Holliday junction resolvase OS=Escherichia coli O127:H6
(strain E2348/69 / EPEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>sp|A7ZR72|RUVX_ECO24 Putative Holliday junction resolvase OS=Escherichia coli O139:H28
(strain E24377A / ETEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEA 103
>sp|Q8ZM50|RUVX_SALTY Putative Holliday junction resolvase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEA 103
>sp|B4T5K4|RUVX_SALNS Putative Holliday junction resolvase OS=Salmonella newport (strain
SL254) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
+ DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEA 103
>sp|B5RE57|RUVX_SALG2 Putative Holliday junction resolvase OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
L D G G+A+ + RPL +K + + L+E +E + DE I+GLP +
Sbjct: 6 LAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWMLIERLLKEWQPDEIIVGLPLNM 65
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 66 DGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEA 103
>sp|B5QY73|RUVX_SALEP Putative Holliday junction resolvase OS=Salmonella enteritidis PT4
(strain P125109) GN=yqgF PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
L D G G+A+ + RPL +K + + L+E +E + DE I+GLP +
Sbjct: 6 LAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWMLIERLLKEWQPDEIIVGLPLNM 65
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163
DG+E P + + R A R+ R G V L DE ++ EA
Sbjct: 66 DGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEA 103
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,078,118
Number of Sequences: 539616
Number of extensions: 2349246
Number of successful extensions: 5416
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 314
Number of HSP's that attempted gapping in prelim test: 5201
Number of HSP's gapped (non-prelim): 448
length of query: 170
length of database: 191,569,459
effective HSP length: 109
effective length of query: 61
effective length of database: 132,751,315
effective search space: 8097830215
effective search space used: 8097830215
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)