BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030838
(170 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297733766|emb|CBI15013.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/159 (59%), Positives = 108/159 (67%), Gaps = 21/159 (13%)
Query: 19 RRRRCLSYNNSLDLEYGRRR-------------RVGRGCKDLTRTYGIVACVGGGGGGSG 65
R LS+ DL GR R + G C+D R I AC SG
Sbjct: 97 REMHALSFKGFPDLNVGRERSWPGRLYHCTGTRKDGWNCRDFRRNCRIFAC------SSG 150
Query: 66 GGGERLSSSARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRR 125
GE S S SFLSRSQ YALLKQQ++VAAK+EDYKEAAR+RDSLR FEEEEP+ RLRR
Sbjct: 151 ANGENQSPS--SFLSRSQTYALLKQQLQVAAKSEDYKEAARLRDSLRLFEEEEPVLRLRR 208
Query: 126 LMKEAVAEERFEDAARYRDKLKEIAPNSLLKCLSDATTL 164
L+KEAVA+ERFEDAARYRD+LKEIAP+SLLKC SDATT+
Sbjct: 209 LIKEAVADERFEDAARYRDELKEIAPHSLLKCSSDATTV 247
>gi|225457005|ref|XP_002282383.1| PREDICTED: uncharacterized protein LOC100267315 [Vitis vinifera]
Length = 277
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/154 (61%), Positives = 107/154 (69%), Gaps = 21/154 (13%)
Query: 24 LSYNNSLDLEYGRRR-------------RVGRGCKDLTRTYGIVACVGGGGGGSGGGGER 70
LS+ DL GR R + G C+D R I AC SG GE
Sbjct: 4 LSFKGFPDLNVGRERSWPGRLYHCTGTRKDGWNCRDFRRNCRIFAC------SSGANGEN 57
Query: 71 LSSSARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEA 130
S S SFLSRSQ YALLKQQ++VAAK+EDYKEAAR+RDSLR FEEEEP+ RLRRL+KEA
Sbjct: 58 QSPS--SFLSRSQTYALLKQQLQVAAKSEDYKEAARLRDSLRLFEEEEPVLRLRRLIKEA 115
Query: 131 VAEERFEDAARYRDKLKEIAPNSLLKCLSDATTL 164
VA+ERFEDAARYRD+LKEIAP+SLLKC SDATT+
Sbjct: 116 VADERFEDAARYRDELKEIAPHSLLKCSSDATTV 149
>gi|224133570|ref|XP_002321607.1| predicted protein [Populus trichocarpa]
gi|222868603|gb|EEF05734.1| predicted protein [Populus trichocarpa]
Length = 285
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 99/135 (73%), Gaps = 4/135 (2%)
Query: 34 YGRRRRVGRGCKDLTRTYGIVACV----GGGGGGSGGGGERLSSSARSFLSRSQAYALLK 89
+G R ++ +R IVAC GGG G S S SFLSRSQ YA+LK
Sbjct: 25 FGTEWRQCLNLRNYSRNCRIVACSVERDGGGEGASSSSSSSSDPSPSSFLSRSQTYAMLK 84
Query: 90 QQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEI 149
QQMEVAA++EDY+EAAR+RDSLRSFEE EP+ RLRRL+KEAVA+ERFEDA RYRD+LKEI
Sbjct: 85 QQMEVAAQSEDYEEAARLRDSLRSFEEVEPVLRLRRLLKEAVADERFEDATRYRDELKEI 144
Query: 150 APNSLLKCLSDATTL 164
AP SLLKC SDATTL
Sbjct: 145 APLSLLKCSSDATTL 159
>gi|147841526|emb|CAN75322.1| hypothetical protein VITISV_003764 [Vitis vinifera]
Length = 223
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 85/91 (93%)
Query: 74 SARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAE 133
S SFLSRSQ YALLKQQ++VAAK+EDYKEAAR+RDSLR FEEEEP+ RLRRL+KEAVA+
Sbjct: 5 SPSSFLSRSQTYALLKQQLQVAAKSEDYKEAARLRDSLRLFEEEEPVLRLRRLIKEAVAD 64
Query: 134 ERFEDAARYRDKLKEIAPNSLLKCLSDATTL 164
ERFEDAARYRD+LKEIAP+SLLKC SDATT+
Sbjct: 65 ERFEDAARYRDELKEIAPHSLLKCSSDATTV 95
>gi|224119374|ref|XP_002318056.1| predicted protein [Populus trichocarpa]
gi|222858729|gb|EEE96276.1| predicted protein [Populus trichocarpa]
Length = 283
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 85/93 (91%)
Query: 78 FLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFE 137
FLSRSQ YA+LKQQMEVAA++EDY+EAARIRDSL+SFEEEEP+ RL RL+KEAVA+E+FE
Sbjct: 71 FLSRSQTYAMLKQQMEVAAQSEDYEEAARIRDSLKSFEEEEPVLRLHRLLKEAVADEQFE 130
Query: 138 DAARYRDKLKEIAPNSLLKCLSDATTLVRRDPI 170
DAARYRD+LKEI P+SLLKC SDATTL R+ +
Sbjct: 131 DAARYRDELKEIVPHSLLKCSSDATTLGIRNQV 163
>gi|388490690|gb|AFK33411.1| unknown [Medicago truncatula]
Length = 266
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 83/93 (89%)
Query: 72 SSSARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAV 131
+ S+ SFLSR+Q YALLKQQMEVAAK+EDYKEAARIRDSL+ FEEEEP+ RLRRL+KEA
Sbjct: 47 APSSTSFLSRTQTYALLKQQMEVAAKSEDYKEAARIRDSLKLFEEEEPVLRLRRLIKEAT 106
Query: 132 AEERFEDAARYRDKLKEIAPNSLLKCLSDATTL 164
A+ERF+DAA YRD+LK IAP+S LKC SDATTL
Sbjct: 107 ADERFQDAASYRDELKRIAPHSFLKCSSDATTL 139
>gi|449469699|ref|XP_004152556.1| PREDICTED: F-box protein SKIP16-like [Cucumis sativus]
gi|449487861|ref|XP_004157837.1| PREDICTED: F-box protein SKIP16-like [Cucumis sativus]
Length = 261
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 96/134 (71%), Gaps = 10/134 (7%)
Query: 34 YGRRRRVGRGCKDLTRTYGIVACVGGGGGGSGGGGERLSSSARSFLSRS---QAYALLKQ 90
+G RR GR C+ IVAC G GG G+ S+S S + YALLKQ
Sbjct: 9 FGGRRAFGRSCR-------IVACASERNIGDGGEGQSQSASTSRSRSFLSRSETYALLKQ 61
Query: 91 QMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
Q+EVAAK+EDY+EAARIRDSL+ FEEEEP+ RLRRLMKEA++ ERFEDAA+YRD+L EIA
Sbjct: 62 QLEVAAKSEDYEEAARIRDSLKLFEEEEPVLRLRRLMKEAISSERFEDAAKYRDELNEIA 121
Query: 151 PNSLLKCLSDATTL 164
P+ LLKC SDATTL
Sbjct: 122 PHCLLKCASDATTL 135
>gi|356513515|ref|XP_003525459.1| PREDICTED: uncharacterized protein LOC100784413 [Glycine max]
Length = 265
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 77/84 (91%)
Query: 81 RSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAA 140
R+Q YALLKQQ++VAAK+EDYKEAARIRDSL+ FE+EEP+ RLRRL+KEA+AEERF+DAA
Sbjct: 55 RTQTYALLKQQLQVAAKSEDYKEAARIRDSLKQFEDEEPVLRLRRLLKEAIAEERFQDAA 114
Query: 141 RYRDKLKEIAPNSLLKCLSDATTL 164
YRD+L IAP+SLLKC SDATTL
Sbjct: 115 SYRDELNNIAPHSLLKCCSDATTL 138
>gi|356562724|ref|XP_003549619.1| PREDICTED: uncharacterized protein LOC100782176 [Glycine max]
Length = 264
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 78/84 (92%)
Query: 81 RSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAA 140
R+Q YALLKQQ++VAAK+EDYKEAARIRDSL+ FE+EEP+ RLRRL+KEAVAEERF+DAA
Sbjct: 54 RTQTYALLKQQLQVAAKSEDYKEAARIRDSLKLFEDEEPVLRLRRLLKEAVAEERFQDAA 113
Query: 141 RYRDKLKEIAPNSLLKCLSDATTL 164
YRD+L +IAP+SLLKC SDATTL
Sbjct: 114 SYRDELNKIAPHSLLKCCSDATTL 137
>gi|255636969|gb|ACU18817.1| unknown [Glycine max]
Length = 184
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 78/84 (92%)
Query: 81 RSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAA 140
R+Q YALLKQQ++VAAK+EDYKEAARIRDSL+ FE+EEP+ RLRRL+KEAVAEERF+DAA
Sbjct: 54 RTQTYALLKQQLQVAAKSEDYKEAARIRDSLKLFEDEEPVLRLRRLLKEAVAEERFQDAA 113
Query: 141 RYRDKLKEIAPNSLLKCLSDATTL 164
YRD+L +IAP+SLLKC SDATTL
Sbjct: 114 SYRDELNKIAPHSLLKCCSDATTL 137
>gi|242089717|ref|XP_002440691.1| hypothetical protein SORBIDRAFT_09g005200 [Sorghum bicolor]
gi|241945976|gb|EES19121.1| hypothetical protein SORBIDRAFT_09g005200 [Sorghum bicolor]
Length = 290
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 78/88 (88%)
Query: 77 SFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERF 136
S L RSQ YA+LKQQ+ VAA+ EDYKEAAR+RDSLRSFEEEEP+ RLRRLMK+A+ EERF
Sbjct: 76 SLLMRSQKYAMLKQQLAVAAQFEDYKEAARLRDSLRSFEEEEPVLRLRRLMKKAIDEERF 135
Query: 137 EDAARYRDKLKEIAPNSLLKCLSDATTL 164
EDAA+YRD+L +AP+SLLKC SDATTL
Sbjct: 136 EDAAKYRDELMILAPHSLLKCSSDATTL 163
>gi|356507256|ref|XP_003522385.1| PREDICTED: uncharacterized protein LOC100799029 [Glycine max]
Length = 286
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 89/112 (79%), Gaps = 5/112 (4%)
Query: 53 IVACVGGGGGGSGGGGERLSSSARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLR 112
+V+C G G E + S++ SF+S S YA+LK +ME AAK+E Y+EA+RIRDSL+
Sbjct: 53 MVSC-----GSERNGNEGIGSNSGSFMSPSHNYAILKHRMEKAAKSEYYEEASRIRDSLK 107
Query: 113 SFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIAPNSLLKCLSDATTL 164
FE+E P+ RLRRL+KEAVA+ERF+DAARYRD+LKEIAP+SLLKC SDATTL
Sbjct: 108 CFEDEIPVLRLRRLLKEAVADERFQDAARYRDELKEIAPHSLLKCSSDATTL 159
>gi|222630358|gb|EEE62490.1| hypothetical protein OsJ_17287 [Oryza sativa Japonica Group]
Length = 300
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 80/90 (88%)
Query: 75 ARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEE 134
A +FL RSQ YA+LKQQ+ VAA+ EDYKEAAR+RDSL+SFEEEEP+ RLRR +K+AV EE
Sbjct: 83 AAAFLMRSQKYAMLKQQLAVAAQFEDYKEAARLRDSLKSFEEEEPVLRLRRSLKKAVEEE 142
Query: 135 RFEDAARYRDKLKEIAPNSLLKCLSDATTL 164
RFEDAA+YRD+LK +AP++LLKC SDATTL
Sbjct: 143 RFEDAAKYRDELKILAPHALLKCSSDATTL 172
>gi|115462343|ref|NP_001054771.1| Os05g0170800 [Oryza sativa Japonica Group]
gi|52353765|gb|AAU44331.1| unknown protein [Oryza sativa Japonica Group]
gi|113578322|dbj|BAF16685.1| Os05g0170800 [Oryza sativa Japonica Group]
gi|125550999|gb|EAY96708.1| hypothetical protein OsI_18629 [Oryza sativa Indica Group]
Length = 300
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 80/90 (88%)
Query: 75 ARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEE 134
A +FL RSQ YA+LKQQ+ VAA+ EDYKEAAR+RDSL+SFEEEEP+ RLRR +K+AV EE
Sbjct: 83 AAAFLMRSQKYAMLKQQLAVAAQFEDYKEAARLRDSLKSFEEEEPVLRLRRSLKKAVEEE 142
Query: 135 RFEDAARYRDKLKEIAPNSLLKCLSDATTL 164
RFEDAA+YRD+LK +AP++LLKC SDATTL
Sbjct: 143 RFEDAAKYRDELKILAPHALLKCSSDATTL 172
>gi|169730490|gb|ACA64811.1| SKIP interacting protein 10 [Oryza sativa]
Length = 300
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 80/90 (88%)
Query: 75 ARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEE 134
A +FL RSQ YA+LKQQ+ VAA+ EDYKEAAR+RDSL+SFEEEEP+ RLRR +K+AV EE
Sbjct: 83 AAAFLMRSQKYAMLKQQLAVAAQFEDYKEAARLRDSLKSFEEEEPVLRLRRSLKKAVEEE 142
Query: 135 RFEDAARYRDKLKEIAPNSLLKCLSDATTL 164
RFEDAA+YRD+LK +AP++LLKC SDATTL
Sbjct: 143 RFEDAAKYRDELKILAPHALLKCSSDATTL 172
>gi|226504764|ref|NP_001151326.1| uvrB/uvrC motif family protein [Zea mays]
gi|224029799|gb|ACN33975.1| unknown [Zea mays]
gi|413948745|gb|AFW81394.1| uvrB/uvrC motif family protein [Zea mays]
Length = 290
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/88 (75%), Positives = 78/88 (88%)
Query: 77 SFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERF 136
S L RSQ YA+LKQQ+ VAA+ EDYKEAAR+RDSLRSFEE+EP+ LRRLMK+A+ EERF
Sbjct: 76 SLLMRSQKYAMLKQQLAVAAQFEDYKEAARLRDSLRSFEEKEPVLCLRRLMKKAIEEERF 135
Query: 137 EDAARYRDKLKEIAPNSLLKCLSDATTL 164
EDAA+YRD+LK +AP+SLLKC SDATTL
Sbjct: 136 EDAAKYRDELKILAPHSLLKCSSDATTL 163
>gi|195645834|gb|ACG42385.1| uvrB/uvrC motif family protein [Zea mays]
Length = 290
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 78/88 (88%)
Query: 77 SFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERF 136
S L RSQ YA+LKQQ+ VAA+ EDYKEAAR+RDSLRSFEE+EP+ LRRLMK+A+ EERF
Sbjct: 76 SLLMRSQKYAMLKQQLAVAAQFEDYKEAARLRDSLRSFEEKEPVLCLRRLMKKAIEEERF 135
Query: 137 EDAARYRDKLKEIAPNSLLKCLSDATTL 164
EDAA+YRD+LK +AP+SLLKC SDAT+L
Sbjct: 136 EDAAKYRDELKILAPHSLLKCSSDATSL 163
>gi|357129692|ref|XP_003566495.1| PREDICTED: uncharacterized protein LOC100832438 [Brachypodium
distachyon]
Length = 297
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 79/91 (86%)
Query: 74 SARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAE 133
+A +FL RSQ YA+LKQQ+ VAA+ EDYKEAAR+RDSLRSFEEEEP+ RLRR +K+AV E
Sbjct: 80 AAAAFLLRSQKYAMLKQQLAVAAQLEDYKEAARLRDSLRSFEEEEPVLRLRRSLKKAVEE 139
Query: 134 ERFEDAARYRDKLKEIAPNSLLKCLSDATTL 164
ERF DAA+YRD+L +AP+SLLKC SDATT+
Sbjct: 140 ERFADAAKYRDELMILAPHSLLKCSSDATTV 170
>gi|356518967|ref|XP_003528146.1| PREDICTED: uncharacterized protein LOC100780493 [Glycine max]
Length = 271
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 100/156 (64%), Gaps = 25/156 (16%)
Query: 9 INVSTEFNATRRRRCLSYNNSLDLEYGRRRRVGRGCKDLTRTYGIVACVGGGGGGSGGGG 68
+ V T A+ R++ ++Y N RR GR IV+C G G
Sbjct: 16 LPVLTNSEASTRKQRVNYPN---------RRYGRNV--------IVSC-----GLERNGN 53
Query: 69 ERLSSSARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMK 128
E + S+ SF S YA+LK +ME AK+E Y+EAARIRDSL+ FE+E P+ RLRRL+K
Sbjct: 54 EGMGSNEGSF---SHNYAILKHRMEKVAKSEYYEEAARIRDSLKCFEDEVPVLRLRRLLK 110
Query: 129 EAVAEERFEDAARYRDKLKEIAPNSLLKCLSDATTL 164
EAVA+ERF+DAARYRD+LK IAP+SLLKC SDATTL
Sbjct: 111 EAVADERFQDAARYRDELKAIAPHSLLKCSSDATTL 146
>gi|148907224|gb|ABR16753.1| unknown [Picea sitchensis]
Length = 301
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 77 SFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERF 136
SFLSRSQ + LLKQQM VAA EDYKEAARIRD+L+ E++EP RL L+K+A++EERF
Sbjct: 102 SFLSRSQTHTLLKQQMRVAALNEDYKEAARIRDALKVMEDQEPALRLLSLLKKAISEERF 161
Query: 137 EDAARYRDKLKEIAPNSLLKCLSDATTL 164
EDAA+YR++L+ IAP++LLKC SD TTL
Sbjct: 162 EDAAKYRNELELIAPDALLKCFSDTTTL 189
>gi|255540639|ref|XP_002511384.1| conserved hypothetical protein [Ricinus communis]
gi|223550499|gb|EEF51986.1| conserved hypothetical protein [Ricinus communis]
Length = 290
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 100/189 (52%), Gaps = 50/189 (26%)
Query: 1 MHAFNLSSINVSTEFNATRRRRCLSYNNSLDLEYGRRRRVGRGCKDLTRTYG-------- 52
MH+ SSI V T+FN T RR C +S G RR+ + + L G
Sbjct: 1 MHSLASSSIKVFTDFN-TGRRTCFPVRSS-----GFDRRIQQH-QQLVINLGVSPSYFRN 53
Query: 53 ----------IVAC-------VGGGGGGSGGGGERLSSSARSFLSRSQAYALLKQQMEVA 95
IVAC G G S G ++ SF SR+Q YA LKQQMEVA
Sbjct: 54 FSNNNSNSCRIVACSVERNGNGGSGASSSSSSGSGSDYNSSSFASRTQTYAFLKQQMEVA 113
Query: 96 AKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIAPNSLL 155
A++EDY+EAARIRDSLRSFEEEEP DA RYRD+LKEIAP+SLL
Sbjct: 114 AQSEDYEEAARIRDSLRSFEEEEP------------------DAVRYRDELKEIAPHSLL 155
Query: 156 KCLSDATTL 164
KC SDATTL
Sbjct: 156 KCSSDATTL 164
>gi|168045897|ref|XP_001775412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673215|gb|EDQ59741.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 206
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
Query: 98 TEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIAPNSL--- 154
++DY EAAR+RD ++S + E+P+ RL+ LM++A+AEE++ +AA +RD+L +I+P +
Sbjct: 10 SQDYAEAARLRDMVKSLQGEDPVVRLKTLMEKAIAEEQYAEAAMHRDELNKISPPKVDLG 69
Query: 155 LKCLSDATT 163
L+C SD TT
Sbjct: 70 LQCYSDTTT 78
>gi|414876375|tpg|DAA53506.1| TPA: hypothetical protein ZEAMMB73_212616 [Zea mays]
Length = 223
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 18/96 (18%)
Query: 87 LLKQQMEVAAKTEDYKEAARIRD--------SLRSFEEEEPIFRL----------RRLMK 128
+LKQQ+ VAA+ E ++ D L+ E E + + RRLMK
Sbjct: 1 MLKQQLAVAAQFEHSPKSGLFVDLYLGIGLAGLQGSSEVEGLAEVLRGEGAHVVPRRLMK 60
Query: 129 EAVAEERFEDAARYRDKLKEIAPNSLLKCLSDATTL 164
+A+ EERFEDAA+YRD+LK +AP+SLLKC SDATTL
Sbjct: 61 KAIEEERFEDAAKYRDELKILAPHSLLKCSSDATTL 96
>gi|307110013|gb|EFN58250.1| hypothetical protein CHLNCDRAFT_57083 [Chlorella variabilis]
Length = 272
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLK 147
L+ ++ A K EDY AARIRD + E+E+P+ R +++AVAEERFEDAA+ RD+LK
Sbjct: 62 LRAGLQEAIKAEDYGTAARIRDRIAQVEQEDPVVTAERELEQAVAEERFEDAAKLRDRLK 121
Query: 148 EI 149
E+
Sbjct: 122 EL 123
>gi|302841432|ref|XP_002952261.1| hypothetical protein VOLCADRAFT_105396 [Volvox carteri f.
nagariensis]
gi|300262526|gb|EFJ46732.1| hypothetical protein VOLCADRAFT_105396 [Volvox carteri f.
nagariensis]
Length = 279
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLK 147
++ ++++A K ED+K AAR+++ L + ++P+ ++ +++A+ EER+EDAAR + ++K
Sbjct: 66 IELEIKLAVKGEDFKAAARLKEELEALNRKDPVMVAKKALEQAIKEERYEDAARIKAQIK 125
Query: 148 ----EIAPNSLLKC 157
E+ P +L++
Sbjct: 126 QLEDELGPAALMEA 139
>gi|303289551|ref|XP_003064063.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454379|gb|EEH51685.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 390
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKL 146
++++M+ A ED++ A+++RD L + +P+F M A+ EER+EDAA++RD++
Sbjct: 109 VRERMDAAVAAEDFETASKLRDELTELQNADPLFVATLKMNAAIEEERYEDAAKHRDEI 167
>gi|255077322|ref|XP_002502304.1| predicted protein [Micromonas sp. RCC299]
gi|226517569|gb|ACO63562.1| predicted protein [Micromonas sp. RCC299]
Length = 360
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLK 147
L+ ME AA+ ED++ AAR+RD L E + +R + A+ EERFEDAAR RD +
Sbjct: 96 LRTSMEAAARAEDFQLAARLRDELNEALERDEHHVAKRQLATAIDEERFEDAARLRDLVA 155
Query: 148 EIAPNSL-----LKCLSDATT 163
+ P + C SD TT
Sbjct: 156 SLEPPPPPPAVKVPCHSDVTT 176
>gi|357476211|ref|XP_003608391.1| Protein EXECUTER [Medicago truncatula]
gi|355509446|gb|AES90588.1| Protein EXECUTER [Medicago truncatula]
Length = 772
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 87 LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDK 145
+LK Q+ A EDY+EAA+++ ++ + + + +++ L+K A+ EER+ DAA RDK
Sbjct: 128 ILKSQLRHAVYVEDYEEAAKLKVAIAAAANNDSVGKVKTLLKRAIKEERYNDAAFLRDK 186
>gi|449019489|dbj|BAM82891.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 438
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 81 RSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAA 140
++ A L+++++ EDY EAARIRD LR P+ +R +++A+ E+RF+DAA
Sbjct: 312 KTDAVHKLERELKECIAREDYMEAARIRDELRRLF---PLDAMRDAIRKAIEEQRFDDAA 368
Query: 141 RYRDKL 146
R RD++
Sbjct: 369 RIRDQI 374
>gi|225464089|ref|XP_002271011.1| PREDICTED: protein EXECUTER 1, chloroplastic [Vitis vinifera]
gi|296088775|emb|CBI38225.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRD 144
++LK Q+ A K EDY++AAR++ ++ + + + R+ L+ A+AEER++DAA RD
Sbjct: 152 SILKSQLGHAVKKEDYEDAARLKVAIAAAATNDTVGRVMSLLNRAIAEERYDDAAFIRD 210
>gi|299470699|emb|CBN79745.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 705
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 66 GGGERLSSSARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRR 125
GGGE L +K+ M A + EDYK A +R+ + + ++P++ +
Sbjct: 197 GGGEGLEMDLEGLRDMRSNVNKIKRSMRRAVEEEDYKTAGDLRNEMAAIRAKDPLYVVSD 256
Query: 126 LMKEAVAEERFEDAARYRDKLKEIAPNS--------LLKCLSD-ATTLVRRDP 169
L+ AV++E+F+ AAR RD I S L CL D A+ ++ DP
Sbjct: 257 LLGVAVSKEKFKRAARLRDAKDWILRESRGSVFEVDRLVCLGDKASNIITTDP 309
>gi|302768575|ref|XP_002967707.1| hypothetical protein SELMODRAFT_227764 [Selaginella moellendorffii]
gi|300164445|gb|EFJ31054.1| hypothetical protein SELMODRAFT_227764 [Selaginella moellendorffii]
Length = 693
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 41/58 (70%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDK 145
LK Q+E A K E+++EAA+++ ++ + + + I + + ++ A+ EER++DAAR RD+
Sbjct: 143 LKFQLEEAVKLENFQEAAKLKRAIEAAKANDVISEVNKELQRALQEERYKDAARLRDE 200
>gi|255636580|gb|ACU18628.1| unknown [Glycine max]
Length = 155
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 23/27 (85%)
Query: 138 DAARYRDKLKEIAPNSLLKCLSDATTL 164
DAA YRD+L IAP+SLLKC SDATTL
Sbjct: 2 DAASYRDELNNIAPHSLLKCCSDATTL 28
>gi|302761810|ref|XP_002964327.1| hypothetical protein SELMODRAFT_166436 [Selaginella moellendorffii]
gi|300168056|gb|EFJ34660.1| hypothetical protein SELMODRAFT_166436 [Selaginella moellendorffii]
Length = 684
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 40/58 (68%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDK 145
LK Q+E A K E ++EAA+++ ++ + + + I + + ++ A+ EER++DAAR RD+
Sbjct: 143 LKFQLEEAVKLEHFQEAAKLKRAIEAAKANDVISEVNKELQRALQEERYKDAARLRDE 200
>gi|302797517|ref|XP_002980519.1| hypothetical protein SELMODRAFT_178249 [Selaginella moellendorffii]
gi|300151525|gb|EFJ18170.1| hypothetical protein SELMODRAFT_178249 [Selaginella moellendorffii]
Length = 590
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDK 145
++LK +E A + EDY EA RIR+ + + + +L +K A+ EER+EDAAR RD+
Sbjct: 55 SVLKFDLEEAVEEEDYSEATRIRNEMLDIRRRDTLGQLMGDLKTALEEERYEDAARIRDE 114
>gi|302790051|ref|XP_002976793.1| hypothetical protein SELMODRAFT_175826 [Selaginella moellendorffii]
gi|300155271|gb|EFJ21903.1| hypothetical protein SELMODRAFT_175826 [Selaginella moellendorffii]
Length = 590
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDK 145
++LK +E A + EDY EA RIR+ + + + +L +K A+ EER+EDAAR RD+
Sbjct: 55 SVLKFDLEEAVEEEDYSEATRIRNEMLDIRRRDTLGQLMGDLKTALEEERYEDAARIRDE 114
>gi|428174557|gb|EKX43452.1| hypothetical protein GUITHDRAFT_73078 [Guillardia theta CCMP2712]
Length = 207
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLK 147
L +M VA E+Y AA +RD + + +P + AVA ER+E+AA R K+K
Sbjct: 18 LDSEMNVAVSEENYSRAAELRDEIARLKSTDPYSNAEAELSIAVANERYEEAAALRKKMK 77
Query: 148 EIA 150
E+A
Sbjct: 78 ELA 80
>gi|297851182|ref|XP_002893472.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339314|gb|EFH69731.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 647
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 38/56 (67%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAAR 141
+LLK Q+E A + ED++EA +++ ++ ++ + + R ++ A++EER+ DA+R
Sbjct: 104 SLLKSQLEDAVEKEDFEEAVKLKQAIAEATVDDAVAEIMRQLQTAISEERYHDASR 159
>gi|5668762|gb|AAD45989.1|AC005916_1 EST gb|N65787 comes from this gene [Arabidopsis thaliana]
Length = 568
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAAR 141
+LLK Q+E A + ED++EA +++ ++ ++ + + R ++ AV EER+ DA+R
Sbjct: 107 SLLKSQLEDAVEKEDFEEAVKLKQAISEATVDDAVAEIMRQLQTAVNEERYHDASR 162
>gi|255584041|ref|XP_002532765.1| EXECUTER1 protein, chloroplast precursor, putative [Ricinus
communis]
gi|223527494|gb|EEF29622.1| EXECUTER1 protein, chloroplast precursor, putative [Ricinus
communis]
Length = 675
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 87 LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRD 144
+LK Q+ A EDY++AAR++ ++ + + + R+ + AVAEER++DAA RD
Sbjct: 126 VLKSQLGHAVNREDYEDAARLKVAIAAAATNDVVGRVMSQLNRAVAEERYQDAALLRD 183
>gi|18396370|ref|NP_564287.1| uncharacterized protein [Arabidopsis thaliana]
gi|15027911|gb|AAK76486.1| unknown protein [Arabidopsis thaliana]
gi|21281187|gb|AAM45133.1| unknown protein [Arabidopsis thaliana]
gi|332192719|gb|AEE30840.1| uncharacterized protein [Arabidopsis thaliana]
Length = 651
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAAR 141
+LLK Q+E A + ED++EA +++ ++ ++ + + R ++ AV EER+ DA+R
Sbjct: 107 SLLKSQLEDAVEKEDFEEAVKLKQAISEATVDDAVAEIMRQLQTAVNEERYHDASR 162
>gi|168023726|ref|XP_001764388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684252|gb|EDQ70655.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 638
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 87 LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDK 145
+LK QME A + ED++ AA+ + +L + E++ + + +++A+A+ER++DA RDK
Sbjct: 74 MLKIQMEKAVEQEDFQSAAKCKAALDAVTEKDIVADVMNGLEQALADERYDDATLLRDK 132
>gi|297802636|ref|XP_002869202.1| hypothetical protein ARALYDRAFT_913050 [Arabidopsis lyrata subsp.
lyrata]
gi|297315038|gb|EFH45461.1| hypothetical protein ARALYDRAFT_913050 [Arabidopsis lyrata subsp.
lyrata]
Length = 680
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDK 145
++LK Q+ A K EDY++AAR++ ++ + + + ++ AV EER++DA RDK
Sbjct: 128 SVLKSQLNRAIKREDYEDAARLKVAIAATATNDAVGKVMSTFYRAVLEERYKDAVYLRDK 187
>gi|20466272|gb|AAM20453.1| unknown protein [Arabidopsis thaliana]
Length = 352
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%)
Query: 84 AYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAAR 141
+LLK Q+E A + ED++EA +++ ++ ++ + + R ++ AV EER+ DA+R
Sbjct: 105 VVSLLKSQLEDAVEKEDFEEAVKLKQAISEATVDDAVAEIMRQLQTAVNEERYHDASR 162
>gi|168012308|ref|XP_001758844.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689981|gb|EDQ76350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 588
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 40/58 (68%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDK 145
LK Q+E A + E+++ AA+ + +L + +++ + + +K+A+AEER+++A +RDK
Sbjct: 32 LKSQLEKAVEQENFQAAAKCKVALDAVTQKDVVAEVMNGLKKALAEERYDNATLFRDK 89
>gi|224133514|ref|XP_002321589.1| predicted protein [Populus trichocarpa]
gi|222868585|gb|EEF05716.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 77 SFLSRSQAYA-LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEER 135
S + +++++A LLK Q+E A + ED++EAA+++ ++ ++ + ++ +K AV EER
Sbjct: 12 SEIEQAESFASLLKFQLEDAIENEDFQEAAKLKIAIAEATSKDNVAQIMSQLKNAVDEER 71
Query: 136 FEDAAR 141
+ DA+R
Sbjct: 72 YHDASR 77
>gi|449516665|ref|XP_004165367.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Cucumis sativus]
Length = 685
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRD 144
+ LK ++ A EDY++AAR++ ++ + + + R + A+ EER+ DAA RD
Sbjct: 121 SFLKSRISHAVYAEDYQDAARLKVAIAALATNDTVGRAMSYLHRAIEEERYHDAAFIRD 179
>gi|449438572|ref|XP_004137062.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Cucumis sativus]
Length = 700
Score = 42.0 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRD 144
+ LK ++ A EDY++AAR++ ++ + + + R + A+ EER+ DAA RD
Sbjct: 136 SFLKSRISHAVYAEDYQDAARLKVAIAALATNDTVGRAMSYLHRAIEEERYHDAAFIRD 194
>gi|220927783|ref|YP_002504692.1| UvrB/UvrC protein [Clostridium cellulolyticum H10]
gi|219998111|gb|ACL74712.1| UvrB/UvrC protein [Clostridium cellulolyticum H10]
Length = 162
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 32 LEYGRRRRVGR-GCKDLTRTYG-----IVACVGGGGGGSGGGGERLSSSARSFLSRSQAY 85
+EY + R GC + + IV + G G G R+SS+ +S +
Sbjct: 74 MEYNEFLKTSRLGCSQCYKVFADKLDPIVKRLHGNGEHHGKVPSRVSSN----VSITNEM 129
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEE 118
LKQ + A K E Y+EAA+IRD ++S E EE
Sbjct: 130 DKLKQLLNEAIKNEKYEEAAKIRDRIKSLEVEE 162
>gi|147771704|emb|CAN67006.1| hypothetical protein VITISV_020408 [Vitis vinifera]
Length = 830
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 96 AKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRD 144
K EDY++AAR++ ++ + + + R+ L+ A+AEER++DAA RD
Sbjct: 164 VKKEDYEDAARLKVAIAAAATNDTVGRVMSLLNRAIAEERYDDAAFIRD 212
>gi|224119310|ref|XP_002318039.1| predicted protein [Populus trichocarpa]
gi|222858712|gb|EEE96259.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 79 LSRSQAYA-LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFE 137
+ +++++A +LK Q+E A + ED++EAA+++ ++ ++ + + +K AV EER+
Sbjct: 95 IEQAESFASVLKFQLEDAIENEDFQEAAKLKIAIAEATSKDNVAHIMSELKNAVEEERYH 154
Query: 138 DAAR 141
DA++
Sbjct: 155 DASK 158
>gi|203288263|ref|YP_002223278.1| excinuclease ABC, subunit B [Borrelia recurrentis A1]
gi|201085483|gb|ACH95057.1| excinuclease ABC, subunit B [Borrelia recurrentis A1]
Length = 654
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 91 QMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEI 149
+ E KT DY I D+ + E+ I +L+ + EAV +ERFEDA RDK+KE+
Sbjct: 595 EKEFKNKTLDYNVEKIISDN--NLSREDLIIKLKFELNEAVEDERFEDAIFLRDKIKEL 651
>gi|224141143|ref|XP_002323934.1| predicted protein [Populus trichocarpa]
gi|222866936|gb|EEF04067.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 37/59 (62%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRD 144
+LLK Q+ A EDY++AAR++ ++ + + + R+ + A+A+ER+ +AA RD
Sbjct: 128 SLLKSQLGNAVNREDYEDAARLKVAIAAAASNDTVGRVMSQLNRALAQERYLEAAFLRD 186
>gi|452822556|gb|EME29574.1| ApaG protein [Galdieria sulphuraria]
Length = 433
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%)
Query: 87 LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKL 146
LL+Q+ ++AAK ++EA+++++ L ++P L +++AV EER+ DAA Y D +
Sbjct: 99 LLRQERDLAAKEYRFEEASKLKERLLELTMQDPYACLELELRKAVEEERYRDAAIYSDAM 158
Query: 147 KEI 149
+ I
Sbjct: 159 RVI 161
>gi|52076198|dbj|BAD44852.1| unknown protein [Oryza sativa Japonica Group]
gi|52076237|dbj|BAD44891.1| unknown protein [Oryza sativa Japonica Group]
gi|125568720|gb|EAZ10235.1| hypothetical protein OsJ_00066 [Oryza sativa Japonica Group]
gi|215687318|dbj|BAG91905.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 627
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 79 LSRSQAYA-LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFE 137
+ ++++YA LLK Q+E A ED+ EA++++ ++ + + ++ +K A+ E+R++
Sbjct: 71 VDQAESYASLLKFQLEEAVDNEDFAEASKLKKAILEATGNDAVAQVMSELKTAIEEQRYQ 130
Query: 138 DAAR 141
DA+R
Sbjct: 131 DASR 134
>gi|125524107|gb|EAY72221.1| hypothetical protein OsI_00074 [Oryza sativa Indica Group]
Length = 625
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 79 LSRSQAYA-LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFE 137
+ ++++YA LLK Q+E A ED+ EA++++ ++ + + ++ +K A+ E+R++
Sbjct: 69 VDQAESYASLLKFQLEEAVDNEDFAEASKLKKAILEATGNDAVAQVMSELKTAIEEQRYQ 128
Query: 138 DAAR 141
DA+R
Sbjct: 129 DASR 132
>gi|255074109|ref|XP_002500729.1| hypothetical protein MICPUN_57395 [Micromonas sp. RCC299]
gi|226515992|gb|ACO61987.1| hypothetical protein MICPUN_57395 [Micromonas sp. RCC299]
Length = 1030
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRD 144
L+ Q+E A ED+ AA I+ ++ S +E+PI + R + AV E + AA +RD
Sbjct: 155 LQAQLEDAVAKEDFTAAASIKKTIASMRDEDPITAVERGYRAAVENEDYAAAATFRD 211
>gi|114777054|ref|ZP_01452074.1| excinuclease ABC subunit B [Mariprofundus ferrooxydans PV-1]
gi|114552575|gb|EAU55035.1| excinuclease ABC subunit B [Mariprofundus ferrooxydans PV-1]
Length = 659
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 100 DYKEAARI--RDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRD---KLKEIA 150
DY + + + S ++++ + L RLM EA A+ RFEDAARYRD +LKEIA
Sbjct: 602 DYAHIPEVAEPEPMTSAQKQQRMSELERLMAEAAADLRFEDAARYRDERIQLKEIA 657
>gi|125974295|ref|YP_001038205.1| UvrB/UvrC protein [Clostridium thermocellum ATCC 27405]
gi|256003487|ref|ZP_05428477.1| UvrB/UvrC protein [Clostridium thermocellum DSM 2360]
gi|281418349|ref|ZP_06249369.1| UvrB/UvrC protein [Clostridium thermocellum JW20]
gi|385779764|ref|YP_005688929.1| UvrB/UvrC protein [Clostridium thermocellum DSM 1313]
gi|419722356|ref|ZP_14249500.1| UvrB/UvrC protein [Clostridium thermocellum AD2]
gi|419725940|ref|ZP_14252974.1| UvrB/UvrC protein [Clostridium thermocellum YS]
gi|125714520|gb|ABN53012.1| UvrB/UvrC protein [Clostridium thermocellum ATCC 27405]
gi|255992511|gb|EEU02603.1| UvrB/UvrC protein [Clostridium thermocellum DSM 2360]
gi|281409751|gb|EFB40009.1| UvrB/UvrC protein [Clostridium thermocellum JW20]
gi|316941444|gb|ADU75478.1| UvrB/UvrC protein [Clostridium thermocellum DSM 1313]
gi|380770716|gb|EIC04602.1| UvrB/UvrC protein [Clostridium thermocellum YS]
gi|380781541|gb|EIC11195.1| UvrB/UvrC protein [Clostridium thermocellum AD2]
Length = 168
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 32 LEYGRRRRVGR-GCKDLTRTYG--IVACVGGGGGGSGGGGERLSSSARSFLSRSQAYALL 88
+ Y ++VG+ GC + +TYG +V + G G + S A + S+ L
Sbjct: 77 MSYEEFKKVGKLGCSNCYKTYGDRLVPLLRRLHGNIQYNG-KFPSRAFGSIKISREIEKL 135
Query: 89 KQQMEVAAKTEDYKEAARIRDSLRSFEEEE 118
K+Q+ +A K E+Y++AA +RD +R+ E +
Sbjct: 136 KEQLNIAIKNEEYEKAAILRDQIRNLESNQ 165
>gi|312144277|ref|YP_003995723.1| UvrB/UvrC protein [Halanaerobium hydrogeniformans]
gi|311904928|gb|ADQ15369.1| UvrB/UvrC protein [Halanaerobium hydrogeniformans]
Length = 181
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 115 EEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEI 149
E +E I RL+ M+ AV EERFEDAA RDK+ EI
Sbjct: 133 EYQEEINRLKAEMESAVEEERFEDAAEIRDKIHEI 167
>gi|356519469|ref|XP_003528395.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Glycine max]
Length = 699
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDK 145
LK Q+ A EDY++AAR++ + + + + R+ + A+ EER+ DAA RDK
Sbjct: 119 LKSQLSRAVYLEDYEDAARLKVAFAAAANNDSVGRVMSYLNRAIKEERYGDAAFLRDK 176
>gi|449518939|ref|XP_004166493.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Cucumis sativus]
Length = 657
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 36/55 (65%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAA 140
++LK Q+E A + ED++EAA+++ + ++ + + +K A+ EER++DA+
Sbjct: 109 SVLKFQLEEAVEKEDFEEAAKLKLVIAETARKDSVTEIMHQLKSAIEEERYQDAS 163
>gi|449441021|ref|XP_004138282.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Cucumis sativus]
Length = 609
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 36/55 (65%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAA 140
++LK Q+E A + ED++EAA+++ + ++ + + +K A+ EER++DA+
Sbjct: 61 SVLKFQLEEAVEKEDFEEAAKLKLVIAETARKDSVTEIMHQLKSAIEEERYQDAS 115
>gi|296125079|ref|YP_003632331.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296016895|gb|ADG70132.1| protein of unknown function DUF151 [Brachyspira murdochii DSM
12563]
Length = 216
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
E+Y +D ++ EE L+RL+ +AV EER+EDAA+YRD+L ++
Sbjct: 170 EEYNNNTNTKDYKKNKEE------LQRLLDQAVKEERYEDAAKYRDELDNLS 215
>gi|156742924|ref|YP_001433053.1| excinuclease ABC subunit C [Roseiflexus castenholzii DSM 13941]
gi|156234252|gb|ABU59035.1| excinuclease ABC, C subunit [Roseiflexus castenholzii DSM 13941]
Length = 665
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 31 DLEYGRRRRVGRGCKDLTRTYGIVACVGGGGGGSGGGGE---RLSSSARSFLSRSQAYA- 86
D ++ R RR+G+ C Y I C+G G + + S R +S A
Sbjct: 170 DDKFNRHRRLGKPCL----YYDIKRCLGPCVPGLVNQNDYRATVESVCRFLEGKSDLVAK 225
Query: 87 LLKQQMEVAAKTEDYKEAARIRDSLRSFE 115
+L++QME AA+ D++ AAR+RDS+R E
Sbjct: 226 ILRRQMEEAAERLDFERAARLRDSIRDIE 254
>gi|203284737|ref|YP_002222477.1| excinuclease ABC, subunit B [Borrelia duttonii Ly]
gi|201084180|gb|ACH93771.1| excinuclease ABC, subunit B [Borrelia duttonii Ly]
Length = 654
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 91 QMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEI 149
+ E +T DY I D+ + E+ I +L+ + EAV +ERFEDA RDK+KE+
Sbjct: 595 EKEFKNETLDYNVEKIISDN--NLSREDLIIKLKFELNEAVEDERFEDAIFLRDKIKEL 651
>gi|255540691|ref|XP_002511410.1| EXECUTER1 protein, chloroplast precursor, putative [Ricinus
communis]
gi|223550525|gb|EEF52012.1| EXECUTER1 protein, chloroplast precursor, putative [Ricinus
communis]
Length = 658
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 37/56 (66%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAAR 141
++LK Q+E A + ED++EAA+++ ++ ++ + + ++ A+ EER+ DA+R
Sbjct: 113 SVLKFQLEDAIEKEDFQEAAKLKLAIAEATSKDSVAEIMSELQNAIDEERYHDASR 168
>gi|18418256|ref|NP_567929.1| protein EXECUTER 1 [Arabidopsis thaliana]
gi|30689758|ref|NP_849488.1| protein EXECUTER 1 [Arabidopsis thaliana]
gi|56404652|sp|Q93YW0.1|EXEC1_ARATH RecName: Full=Protein EXECUTER 1, chloroplastic; Flags: Precursor
gi|16604595|gb|AAL24154.1| unknown protein [Arabidopsis thaliana]
gi|21436095|gb|AAM51248.1| unknown protein [Arabidopsis thaliana]
gi|332660857|gb|AEE86257.1| protein EXECUTER 1 [Arabidopsis thaliana]
gi|332660858|gb|AEE86258.1| protein EXECUTER 1 [Arabidopsis thaliana]
Length = 684
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDK 145
++LK Q+ A K EDY++AAR++ ++ + + + ++ A+ EER++DA RDK
Sbjct: 131 SVLKSQLNRAIKREDYEDAARLKVAIAATATNDAVGKVMSTFYRALLEERYKDAVYLRDK 190
>gi|428173810|gb|EKX42710.1| hypothetical protein GUITHDRAFT_111382 [Guillardia theta CCMP2712]
Length = 367
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 39/61 (63%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLK 147
L+ ++++A K EDY +AA++RD L+ E + + +L + E+V ++ F+ A+ + KL
Sbjct: 20 LESELKLAVKLEDYGKAAKVRDELKKAREGDEVAKLLLELGESVNKQDFDKASAIKQKLS 79
Query: 148 E 148
+
Sbjct: 80 D 80
>gi|147839111|emb|CAN68092.1| hypothetical protein VITISV_012749 [Vitis vinifera]
Length = 943
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 77 SFLSRSQAYA-LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEER 135
S + +++++A +LK Q+E A + ED++EAA+++ ++ + + + +K A+ EER
Sbjct: 855 SEIEQAESFASVLKFQLEDAIEREDFEEAAKLKMAIAEAMSMDSVTEIMSQLKNAIDEER 914
Query: 136 FEDAAR 141
+ DA++
Sbjct: 915 YHDASK 920
>gi|226497950|ref|NP_001146198.1| uncharacterized protein LOC100279768 [Zea mays]
gi|219886155|gb|ACL53452.1| unknown [Zea mays]
gi|413947128|gb|AFW79777.1| hypothetical protein ZEAMMB73_469165 [Zea mays]
Length = 627
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 79 LSRSQAYA-LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFE 137
+ ++++YA LL+ Q+E A + ED+ EAA+++ + + + + +K A+ E+R++
Sbjct: 72 VDQAESYASLLQFQLEEAVENEDFAEAAKLKRDIIEATGNDAVAHVMAELKNAIEEQRYQ 131
Query: 138 DAARYRDKLKEIAPNSLL 155
DA+R L +A SL+
Sbjct: 132 DASR----LTRLAGTSLV 145
>gi|187918690|ref|YP_001884257.1| excinuclease ABC subunit B [Borrelia hermsii DAH]
gi|119861538|gb|AAX17333.1| excinuclease ABC subunit B [Borrelia hermsii DAH]
Length = 654
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 91 QMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEI 149
+ E+ +T DY I D +++ I +L+ ++EAV++ERFEDA RDK+KE+
Sbjct: 595 EKELKNETVDYNIKRIISDD--KLSKKDLIIKLKFKLEEAVSDERFEDAIFLRDKIKEL 651
>gi|308080280|ref|NP_001182951.1| hypothetical protein [Zea mays]
gi|238008424|gb|ACR35247.1| unknown [Zea mays]
gi|414876681|tpg|DAA53812.1| TPA: hypothetical protein ZEAMMB73_854553 [Zea mays]
gi|414876682|tpg|DAA53813.1| TPA: hypothetical protein ZEAMMB73_854553 [Zea mays]
Length = 622
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 79 LSRSQAYA-LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFE 137
+ ++++YA LL+ Q+E A + ED+ EAA+++ + + + + + +K A+ E+R++
Sbjct: 69 VDQAESYASLLQFQLEEAVENEDFAEAAKLKRDIIAATGNDAVAHVMAELKSAIEEQRYQ 128
Query: 138 DAAR 141
DA+R
Sbjct: 129 DASR 132
>gi|414876680|tpg|DAA53811.1| TPA: hypothetical protein ZEAMMB73_854553 [Zea mays]
Length = 486
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 79 LSRSQAYA-LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFE 137
+ ++++YA LL+ Q+E A + ED+ EAA+++ + + + + + +K A+ E+R++
Sbjct: 69 VDQAESYASLLQFQLEEAVENEDFAEAAKLKRDIIAATGNDAVAHVMAELKSAIEEQRYQ 128
Query: 138 DAAR 141
DA+R
Sbjct: 129 DASR 132
>gi|414876683|tpg|DAA53814.1| TPA: hypothetical protein ZEAMMB73_854553 [Zea mays]
Length = 496
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 79 LSRSQAYA-LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFE 137
+ ++++YA LL+ Q+E A + ED+ EAA+++ + + + + + +K A+ E+R++
Sbjct: 69 VDQAESYASLLQFQLEEAVENEDFAEAAKLKRDIIAATGNDAVAHVMAELKSAIEEQRYQ 128
Query: 138 DAAR 141
DA+R
Sbjct: 129 DASR 132
>gi|297733793|emb|CBI15040.3| unnamed protein product [Vitis vinifera]
Length = 656
Score = 38.9 bits (89), Expect = 0.83, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 77 SFLSRSQAYA-LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEER 135
S + +++++A +LK Q+E A + ED++EAA+++ ++ + + + +K A+ EER
Sbjct: 98 SEIEQAESFASVLKFQLEDAIEREDFEEAAKLKMAIAEAMSMDSVTEIMSQLKNAIDEER 157
Query: 136 FEDAAR 141
+ DA++
Sbjct: 158 YHDASK 163
>gi|145355808|ref|XP_001422141.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582381|gb|ABP00458.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 590
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRD 144
L+ Q+E A ++EDY AA ++ + + + ++ +A+AE+RFEDA R RD
Sbjct: 4 LEAQLEDAIESEDYASAASLKRAADALRASDDTGQMCEAYAKAIAEDRFEDAVRLRD 60
>gi|359491590|ref|XP_002279734.2| PREDICTED: protein EXECUTER 1, chloroplastic [Vitis vinifera]
Length = 648
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 77 SFLSRSQAYA-LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEER 135
S + +++++A +LK Q+E A + ED++EAA+++ ++ + + + +K A+ EER
Sbjct: 90 SEIEQAESFASVLKFQLEDAIEREDFEEAAKLKMAIAEAMSMDSVTEIMSQLKNAIDEER 149
Query: 136 FEDAAR 141
+ DA++
Sbjct: 150 YHDASK 155
>gi|356528017|ref|XP_003532602.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Glycine max]
Length = 674
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDK 145
++ K Q+ A E+Y++AAR++ + + + + R+ + A+ EER+ DAA RDK
Sbjct: 118 SIFKSQLSRAVYLENYEDAARLKVAFAATANNDSVGRVMSYLNRAIKEERYGDAAFLRDK 177
>gi|307111774|gb|EFN60008.1| hypothetical protein CHLNCDRAFT_133176 [Chlorella variabilis]
Length = 308
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%)
Query: 60 GGGGSGGGGERLSSSARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEP 119
GGG + + + S ++ + + K QM++A E +++A +RD + +
Sbjct: 205 GGGTTEQHSDVVRSCREEIMAYNDPTIMYKLQMQLAIADERFEDAKSLRDQIDKILASDR 264
Query: 120 IFRLRRLMKEAVAEERFEDAARYRDKLKEI 149
L M+ A+ + R+E+AAR RD+ K +
Sbjct: 265 ALSLVVAMETAMEDGRYEEAARLRDEFKAL 294
>gi|119953614|ref|YP_945824.1| excinuclease ABC subunit B [Borrelia turicatae 91E135]
gi|119862385|gb|AAX18153.1| excinuclease ABC subunit B [Borrelia turicatae 91E135]
Length = 653
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 91 QMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEI 149
+ E+ +T DY I D +++ I +L+ ++EAV +ERFEDA RDK++E+
Sbjct: 595 EKELKNETVDYDIGKIISDD--KLSKKDLIIKLKFKLEEAVCDERFEDAIFLRDKIREL 651
>gi|386860081|ref|YP_006272787.1| hypothetical protein Q7M_856, partial [Borrelia crocidurae str.
Achema]
gi|384934962|gb|AFI31635.1| hypothetical protein Q7M_856 [Borrelia crocidurae str. Achema]
Length = 387
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 93 EVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEI 149
E +T DY I D+ + E+ I +L+ + EAV +ERFEDA RDK+KE+
Sbjct: 330 EFKNETLDYNVEKIISDN--NLSREDLIIKLKFELNEAVEDERFEDAIFLRDKIKEL 384
>gi|148657260|ref|YP_001277465.1| excinuclease ABC subunit C [Roseiflexus sp. RS-1]
gi|148569370|gb|ABQ91515.1| Excinuclease ABC subunit C [Roseiflexus sp. RS-1]
Length = 669
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 31 DLEYGRRRRVGRGCKDLTRTYGIVACVGGGGGGSGGGGE---RLSSSARSFLSRSQ-AYA 86
D ++ R RR+G+ C Y I C+G G E + S R +S
Sbjct: 170 DDKFNRHRRMGKPCL----YYDIKRCLGPCVPGLVNQEEYRATIESVCRFLEGKSDLVVK 225
Query: 87 LLKQQMEVAAKTEDYKEAARIRDSLRSFE 115
L++QME AA+ D++ AAR+RDS+R E
Sbjct: 226 TLRRQMEEAAERLDFERAARLRDSIRDIE 254
>gi|413942926|gb|AFW75575.1| hypothetical protein ZEAMMB73_041211 [Zea mays]
Length = 716
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 19/90 (21%)
Query: 79 LSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEE---- 134
L R QAY L M + E KEA S+ + EEE+P L R++KEA + E
Sbjct: 565 LCRKQAYEALAIVMPMEVVEEVLKEA-----SILNIEEEQPFDDLSRMLKEATSWEEKAR 619
Query: 135 ----------RFEDAARYRDKLKEIAPNSL 154
FED R + ++ I P+ L
Sbjct: 620 LILERSASLYEFEDHMRCSEGIRVILPSKL 649
>gi|357462003|ref|XP_003601283.1| Protein EXECUTER [Medicago truncatula]
gi|355490331|gb|AES71534.1| Protein EXECUTER [Medicago truncatula]
Length = 630
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 79 LSRSQAYA-LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFE 137
+ +++++A LLK Q+E A + E+++EAA+++ ++ ++ + + +K A+ +ER+
Sbjct: 82 IEQAESFASLLKFQLEDAIEKEEFQEAAKLKRAIVEATSKDSVAEIMSQLKNAIDDERYH 141
Query: 138 DAAR 141
DA++
Sbjct: 142 DASK 145
>gi|138893755|ref|YP_001124208.1| ClpC ATPase [Geobacillus thermodenitrificans NG80-2]
gi|196251135|ref|ZP_03149814.1| UvrB/UvrC protein [Geobacillus sp. G11MC16]
gi|134265268|gb|ABO65463.1| ClpC ATPase [Geobacillus thermodenitrificans NG80-2]
gi|196209376|gb|EDY04156.1| UvrB/UvrC protein [Geobacillus sp. G11MC16]
Length = 182
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 29 SLDLEYGRRRRVGR-GCKDLTRTYG-----IVACVGGGGGGSGGGGERLSSSARSFLSRS 82
+ + Y + ++GR GC D RT+ I+ + G G ++ L
Sbjct: 82 TCKMTYHQFTQIGRFGCADCYRTFARYLPPILKRLHSGNNAHSG---KIPKRKGGVLHLR 138
Query: 83 QAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEE 117
+ A+LKQ+++ E+++ AA +RD +RS E+E
Sbjct: 139 KQLAVLKQKLQELVAREEFERAAEVRDQIRSLEDE 173
>gi|261417577|ref|YP_003251259.1| UvrB/UvrC protein [Geobacillus sp. Y412MC61]
gi|319765235|ref|YP_004130736.1| UvrB/UvrC protein [Geobacillus sp. Y412MC52]
gi|261374034|gb|ACX76777.1| UvrB/UvrC protein [Geobacillus sp. Y412MC61]
gi|317110101|gb|ADU92593.1| UvrB/UvrC protein [Geobacillus sp. Y412MC52]
Length = 182
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 29 SLDLEYGRRRRVGR-GCKDLTRTYG-----IVACVGGGGGGSGGGGERLSSSARSFLSRS 82
+ + Y + ++GR GC D RT+ I+ + G G ++ L
Sbjct: 82 TCQMTYHQFTQIGRFGCVDCYRTFARYLPPILKRLHSGNTAHSG---KIPKRKGGVLHLR 138
Query: 83 QAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEE 117
+ A+LKQ+++ E+++ AA +RD +RS E+E
Sbjct: 139 KQLAILKQKLQELVAREEFERAAEVRDQIRSLEDE 173
>gi|445063360|ref|ZP_21375572.1| hypothetical protein H263_08010 [Brachyspira hampsonii 30599]
gi|444505267|gb|ELV05817.1| hypothetical protein H263_08010 [Brachyspira hampsonii 30599]
Length = 220
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 22/24 (91%)
Query: 123 LRRLMKEAVAEERFEDAARYRDKL 146
L++L+ +AV EER+EDAA+YRD+L
Sbjct: 192 LQKLLDQAVKEERYEDAAKYRDEL 215
>gi|225619681|ref|YP_002720938.1| hypothetical protein BHWA1_00740 [Brachyspira hyodysenteriae WA1]
gi|225214500|gb|ACN83234.1| hypothetical protein BHWA1_00740 [Brachyspira hyodysenteriae WA1]
Length = 222
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 22/25 (88%)
Query: 122 RLRRLMKEAVAEERFEDAARYRDKL 146
L++L+ +AV EER+EDAA+YRD+L
Sbjct: 193 ELQKLLDQAVKEERYEDAAKYRDEL 217
>gi|429125091|ref|ZP_19185623.1| hypothetical protein A966_12506 [Brachyspira hampsonii 30446]
gi|426279153|gb|EKV56180.1| hypothetical protein A966_12506 [Brachyspira hampsonii 30446]
Length = 220
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 22/24 (91%)
Query: 123 LRRLMKEAVAEERFEDAARYRDKL 146
L++L+ +AV EER+EDAA+YRD+L
Sbjct: 192 LQKLLDQAVKEERYEDAAKYRDEL 215
>gi|421863318|ref|ZP_16295017.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379255|emb|CBX22212.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 617
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + S + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 191 EDYRDSVRQAATFLSGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 242
>gi|384209270|ref|YP_005594990.1| hypothetical protein Bint_1794 [Brachyspira intermedia PWS/A]
gi|343386920|gb|AEM22410.1| hypothetical protein Bint_1794 [Brachyspira intermedia PWS/A]
Length = 222
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 22/24 (91%)
Query: 123 LRRLMKEAVAEERFEDAARYRDKL 146
L++L+ +AV EER+EDAA+YRD+L
Sbjct: 194 LQKLLDQAVKEERYEDAAKYRDEL 217
>gi|356518979|ref|XP_003528152.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Glycine max]
Length = 634
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 36/56 (64%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAAR 141
++LK Q++ A + ED++EA +++ +L ++ + + +K A+ +ER+ DA+R
Sbjct: 90 SVLKFQLDDAIEKEDFEEAVKLKRALVEATSKDTVAEVMDQLKSAIDDERYHDASR 145
>gi|78043178|ref|YP_361155.1| UvrB/UvrC motif-containing protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995293|gb|ABB14192.1| uvrB/uvrC motif domain protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 172
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 78 FLSRSQAYALLKQQME-----VAAKTEDY-KEAARIRDSLRSFEEEEPIFRLRRLMKEAV 131
FL SQ Y K ++E + TE K A+ ++ E E L++ + EAV
Sbjct: 92 FLGCSQCYETFKDRVEQALRKIHGSTEHRGKFPAKTGGKIKILREIE---NLKKALNEAV 148
Query: 132 AEERFEDAARYRDKLKEI 149
++E FE AA RDK+KE+
Sbjct: 149 SKEEFEKAAELRDKIKEL 166
>gi|319638199|ref|ZP_07992962.1| UvrABC system protein C [Neisseria mucosa C102]
gi|317400472|gb|EFV81130.1| UvrABC system protein C [Neisseria mucosa C102]
Length = 613
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 187 EDYRDSVREAATFLNGKTDELTHTLQHKMQTAAANLQFEEAARYRDQIQALG 238
>gi|404476344|ref|YP_006707775.1| hypothetical protein B2904_orf1695 [Brachyspira pilosicoli B2904]
gi|434381802|ref|YP_006703585.1| hypothetical protein WESB_1028 [Brachyspira pilosicoli WesB]
gi|404430451|emb|CCG56497.1| hypothetical protein WESB_1028 [Brachyspira pilosicoli WesB]
gi|404437833|gb|AFR71027.1| hypothetical protein B2904_orf1695 [Brachyspira pilosicoli B2904]
Length = 201
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 22/24 (91%)
Query: 123 LRRLMKEAVAEERFEDAARYRDKL 146
++RL+ +A+ EER+EDAA+YRD+L
Sbjct: 174 IQRLLDQAIKEERYEDAAKYRDEL 197
>gi|431807526|ref|YP_007234424.1| hypothetical protein BPP43_04475 [Brachyspira pilosicoli P43/6/78]
gi|430780885|gb|AGA66169.1| hypothetical protein BPP43_04475 [Brachyspira pilosicoli P43/6/78]
Length = 201
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 22/24 (91%)
Query: 123 LRRLMKEAVAEERFEDAARYRDKL 146
++RL+ +A+ EER+EDAA+YRD+L
Sbjct: 174 IQRLLDQAIKEERYEDAAKYRDEL 197
>gi|300871732|ref|YP_003786605.1| hypothetical protein BP951000_2128 [Brachyspira pilosicoli 95/1000]
gi|300689433|gb|ADK32104.1| conserved hypothetical protein [Brachyspira pilosicoli 95/1000]
Length = 200
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 22/24 (91%)
Query: 123 LRRLMKEAVAEERFEDAARYRDKL 146
++RL+ +A+ EER+EDAA+YRD+L
Sbjct: 173 IQRLLDQAIKEERYEDAAKYRDEL 196
>gi|356507232|ref|XP_003522373.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Glycine max]
Length = 632
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 35/56 (62%)
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAAR 141
++LK Q++ A + ED++EA ++ +L ++ + + +K A+ +ER+ DA+R
Sbjct: 88 SVLKFQLDDAIEKEDFEEAVKLNRALSEATSKDTVAEIMDQLKSAIDDERYHDASR 143
>gi|408790463|ref|ZP_11202082.1| Excinuclease ABC subunit C [Lactobacillus florum 2F]
gi|408520187|gb|EKK20275.1| Excinuclease ABC subunit C [Lactobacillus florum 2F]
Length = 602
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 76 RSFLSRS--QAYALLKQQMEVAAKTEDYKEAARIRDSLRSFE 115
+SFL+ + QA LL+Q+ME AA ++Y+ AA +RD LR +
Sbjct: 190 KSFLNGNVIQAKQLLQQRMETAAAQQEYERAAELRDQLRYIQ 231
>gi|357127102|ref|XP_003565224.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Brachypodium
distachyon]
Length = 632
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 79 LSRSQAYA-LLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFE 137
+ ++++YA +L ++E A + ED+ EAA ++ ++R + + + +K A+ E+R++
Sbjct: 75 VDQAESYASVLAFRLEEAVEGEDFAEAAALKRAIRDATAHDAVAHVMAQLKSAIEEQRYQ 134
Query: 138 DAARYRDKLKEIAPNSLL 155
DA+R L ++A SL+
Sbjct: 135 DASR----LTKLAGTSLV 148
>gi|374294993|ref|YP_005045184.1| hypothetical protein [Clostridium clariflavum DSM 19732]
gi|359824487|gb|AEV67260.1| uncharacterized protein with conserved CXXC pairs [Clostridium
clariflavum DSM 19732]
Length = 165
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 32 LEYGRRRRVGR-GCKDLTRTYG-----IVACVGGGGGGSGGGGERLSSSARSFLSRSQAY 85
+ Y ++VG+ GC++ + YG ++ + G G +++S + +SR Y
Sbjct: 75 MSYEEFKKVGKFGCENCYKVYGEKLTPLLKRLHGNLQYHGKLPKKVSEDVK--VSREIEY 132
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFE 115
LK+Q+ A K E+Y++AA IRD ++ E
Sbjct: 133 --LKEQLNNAVKNEEYEKAAEIRDRIKELE 160
>gi|261377538|ref|ZP_05982111.1| excinuclease ABC subunit C [Neisseria cinerea ATCC 14685]
gi|269146276|gb|EEZ72694.1| excinuclease ABC subunit C [Neisseria cinerea ATCC 14685]
Length = 628
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|161870201|ref|YP_001599371.1| excinuclease ABC subunit C [Neisseria meningitidis 053442]
gi|161595754|gb|ABX73414.1| excinuclease ABC subunit C [Neisseria meningitidis 053442]
Length = 628
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|419798326|ref|ZP_14323740.1| excinuclease ABC, C subunit [Neisseria sicca VK64]
gi|385694975|gb|EIG25551.1| excinuclease ABC, C subunit [Neisseria sicca VK64]
Length = 611
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 185 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 236
>gi|340362667|ref|ZP_08685039.1| excinuclease ABC subunit C [Neisseria macacae ATCC 33926]
gi|339887189|gb|EGQ76775.1| excinuclease ABC subunit C [Neisseria macacae ATCC 33926]
Length = 611
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 185 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 236
>gi|349609690|ref|ZP_08889067.1| UvrABC system protein C [Neisseria sp. GT4A_CT1]
gi|348611258|gb|EGY60919.1| UvrABC system protein C [Neisseria sp. GT4A_CT1]
Length = 611
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 185 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 236
>gi|421538274|ref|ZP_15984451.1| excinuclease ABC subunit C [Neisseria meningitidis 93003]
gi|402317093|gb|EJU52632.1| excinuclease ABC subunit C [Neisseria meningitidis 93003]
Length = 628
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|385855384|ref|YP_005901897.1| excinuclease ABC subunit C [Neisseria meningitidis M01-240355]
gi|325204325|gb|ADY99778.1| excinuclease ABC, C subunit [Neisseria meningitidis M01-240355]
Length = 628
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|298368881|ref|ZP_06980199.1| excinuclease ABC subunit C [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282884|gb|EFI24371.1| excinuclease ABC subunit C [Neisseria sp. oral taxon 014 str.
F0314]
Length = 613
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 187 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 238
>gi|294669354|ref|ZP_06734433.1| excinuclease ABC subunit C [Neisseria elongata subsp. glycolytica
ATCC 29315]
gi|291308764|gb|EFE50007.1| excinuclease ABC subunit C [Neisseria elongata subsp. glycolytica
ATCC 29315]
Length = 659
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 233 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 284
>gi|254805125|ref|YP_003083346.1| excinuclease ABC subunit C [Neisseria meningitidis alpha14]
gi|254668667|emb|CBA06357.1| putative excinuclease ABC subunit C [Neisseria meningitidis
alpha14]
Length = 628
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|421554927|ref|ZP_16000866.1| excinuclease ABC subunit C [Neisseria meningitidis 98008]
gi|402332080|gb|EJU67411.1| excinuclease ABC subunit C [Neisseria meningitidis 98008]
Length = 628
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|416161408|ref|ZP_11606373.1| excinuclease ABC, C subunit [Neisseria meningitidis N1568]
gi|433473720|ref|ZP_20431081.1| excinuclease ABC subunit C [Neisseria meningitidis 97021]
gi|433482284|ref|ZP_20439544.1| excinuclease ABC subunit C [Neisseria meningitidis 2006087]
gi|433484267|ref|ZP_20441493.1| excinuclease ABC subunit C [Neisseria meningitidis 2002038]
gi|433486534|ref|ZP_20443729.1| excinuclease ABC subunit C [Neisseria meningitidis 97014]
gi|325128377|gb|EGC51260.1| excinuclease ABC, C subunit [Neisseria meningitidis N1568]
gi|432210018|gb|ELK65984.1| excinuclease ABC subunit C [Neisseria meningitidis 97021]
gi|432216077|gb|ELK71960.1| excinuclease ABC subunit C [Neisseria meningitidis 2006087]
gi|432220953|gb|ELK76770.1| excinuclease ABC subunit C [Neisseria meningitidis 2002038]
gi|432221819|gb|ELK77623.1| excinuclease ABC subunit C [Neisseria meningitidis 97014]
Length = 628
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|421561408|ref|ZP_16007255.1| excinuclease ABC subunit C [Neisseria meningitidis NM2657]
gi|254669948|emb|CBA04566.1| putative excinuclease ABC subunit C [Neisseria meningitidis
alpha153]
gi|402338339|gb|EJU73574.1| excinuclease ABC subunit C [Neisseria meningitidis NM2657]
Length = 628
Score = 37.0 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVREAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|433469520|ref|ZP_20426941.1| excinuclease ABC subunit C [Neisseria meningitidis 98080]
gi|432203790|gb|ELK59840.1| excinuclease ABC subunit C [Neisseria meningitidis 98080]
Length = 628
Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|121635037|ref|YP_975282.1| excinuclease ABC subunit C [Neisseria meningitidis FAM18]
gi|416177904|ref|ZP_11610273.1| excinuclease ABC, C subunit [Neisseria meningitidis M6190]
gi|416191932|ref|ZP_11616313.1| excinuclease ABC, C subunit [Neisseria meningitidis ES14902]
gi|433492723|ref|ZP_20449816.1| excinuclease ABC subunit C [Neisseria meningitidis NM586]
gi|433494857|ref|ZP_20451925.1| excinuclease ABC subunit C [Neisseria meningitidis NM762]
gi|433497024|ref|ZP_20454062.1| excinuclease ABC subunit C [Neisseria meningitidis M7089]
gi|433499086|ref|ZP_20456095.1| excinuclease ABC subunit C [Neisseria meningitidis M7124]
gi|433501062|ref|ZP_20458048.1| excinuclease ABC subunit C [Neisseria meningitidis NM174]
gi|433503156|ref|ZP_20460117.1| excinuclease ABC subunit C [Neisseria meningitidis NM126]
gi|120866743|emb|CAM10496.1| excinuclease ABC subunit C [Neisseria meningitidis FAM18]
gi|325132474|gb|EGC55167.1| excinuclease ABC, C subunit [Neisseria meningitidis M6190]
gi|325138248|gb|EGC60817.1| excinuclease ABC, C subunit [Neisseria meningitidis ES14902]
gi|432228509|gb|ELK84209.1| excinuclease ABC subunit C [Neisseria meningitidis NM586]
gi|432230060|gb|ELK85739.1| excinuclease ABC subunit C [Neisseria meningitidis NM762]
gi|432233517|gb|ELK89144.1| excinuclease ABC subunit C [Neisseria meningitidis M7089]
gi|432234920|gb|ELK90540.1| excinuclease ABC subunit C [Neisseria meningitidis M7124]
gi|432236353|gb|ELK91962.1| excinuclease ABC subunit C [Neisseria meningitidis NM174]
gi|432239921|gb|ELK95465.1| excinuclease ABC subunit C [Neisseria meningitidis NM126]
Length = 628
Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|385324007|ref|YP_005878446.1| UvrABC system protein C (UvrC protein; excinuclease ABC subunit C)
[Neisseria meningitidis 8013]
gi|261392394|emb|CAX49936.1| UvrABC system protein C (UvrC protein; excinuclease ABC subunit C)
[Neisseria meningitidis 8013]
Length = 617
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 191 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 242
>gi|157825946|ref|YP_001493666.1| excinuclease ABC subunit C [Rickettsia akari str. Hartford]
gi|189038079|sp|A8GP33.1|UVRC_RICAH RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName:
Full=Excinuclease ABC subunit C
gi|157799904|gb|ABV75158.1| excinuclease ABC subunit C [Rickettsia akari str. Hartford]
Length = 651
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 10/67 (14%)
Query: 99 EDYKE-AARIRDSL----RSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIAPNS 153
EDY++ A+++D L ++ +E L + M+E ++ RFE+AA RD++K ++
Sbjct: 189 EDYRDLVAQVKDFLQGRTKALQEN-----LSKKMEELSSQMRFEEAAEIRDRIKALSYVQ 243
Query: 154 LLKCLSD 160
L C+SD
Sbjct: 244 LKSCVSD 250
>gi|433522037|ref|ZP_20478728.1| excinuclease ABC subunit C [Neisseria meningitidis 61103]
gi|432259854|gb|ELL15124.1| excinuclease ABC subunit C [Neisseria meningitidis 61103]
Length = 628
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|421550820|ref|ZP_15996821.1| excinuclease ABC subunit C [Neisseria meningitidis 69166]
gi|433471595|ref|ZP_20428981.1| excinuclease ABC subunit C [Neisseria meningitidis 68094]
gi|433477770|ref|ZP_20435090.1| excinuclease ABC subunit C [Neisseria meningitidis 70012]
gi|433526332|ref|ZP_20482962.1| excinuclease ABC subunit C [Neisseria meningitidis 69096]
gi|433539105|ref|ZP_20495581.1| excinuclease ABC subunit C [Neisseria meningitidis 70030]
gi|402329357|gb|EJU64718.1| excinuclease ABC subunit C [Neisseria meningitidis 69166]
gi|432208447|gb|ELK64425.1| excinuclease ABC subunit C [Neisseria meningitidis 68094]
gi|432215435|gb|ELK71324.1| excinuclease ABC subunit C [Neisseria meningitidis 70012]
gi|432261096|gb|ELL16353.1| excinuclease ABC subunit C [Neisseria meningitidis 69096]
gi|432273467|gb|ELL28565.1| excinuclease ABC subunit C [Neisseria meningitidis 70030]
Length = 628
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|416203860|ref|ZP_11620146.1| excinuclease ABC, C subunit [Neisseria meningitidis 961-5945]
gi|421542627|ref|ZP_15988734.1| excinuclease ABC subunit C [Neisseria meningitidis NM255]
gi|325142559|gb|EGC64959.1| excinuclease ABC, C subunit [Neisseria meningitidis 961-5945]
gi|402317457|gb|EJU52995.1| excinuclease ABC subunit C [Neisseria meningitidis NM255]
Length = 628
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|385338178|ref|YP_005892051.1| UvrABC system protein C [Neisseria meningitidis WUE 2594]
gi|433475141|ref|ZP_20432482.1| excinuclease ABC subunit C [Neisseria meningitidis 88050]
gi|433513647|ref|ZP_20470437.1| excinuclease ABC subunit C [Neisseria meningitidis 63049]
gi|433515860|ref|ZP_20472628.1| excinuclease ABC subunit C [Neisseria meningitidis 2004090]
gi|433517720|ref|ZP_20474466.1| excinuclease ABC subunit C [Neisseria meningitidis 96023]
gi|433524232|ref|ZP_20480893.1| excinuclease ABC subunit C [Neisseria meningitidis 97020]
gi|433528395|ref|ZP_20485004.1| excinuclease ABC subunit C [Neisseria meningitidis NM3652]
gi|433530596|ref|ZP_20487185.1| excinuclease ABC subunit C [Neisseria meningitidis NM3642]
gi|433532865|ref|ZP_20489428.1| excinuclease ABC subunit C [Neisseria meningitidis 2007056]
gi|433534658|ref|ZP_20491198.1| excinuclease ABC subunit C [Neisseria meningitidis 2001212]
gi|319410592|emb|CBY90961.1| UvrABC system protein C (UvrC protein; excinuclease ABC subunit C)
[Neisseria meningitidis WUE 2594]
gi|432210959|gb|ELK66914.1| excinuclease ABC subunit C [Neisseria meningitidis 88050]
gi|432247179|gb|ELL02618.1| excinuclease ABC subunit C [Neisseria meningitidis 63049]
gi|432252786|gb|ELL08136.1| excinuclease ABC subunit C [Neisseria meningitidis 2004090]
gi|432253456|gb|ELL08800.1| excinuclease ABC subunit C [Neisseria meningitidis 96023]
gi|432259476|gb|ELL14747.1| excinuclease ABC subunit C [Neisseria meningitidis 97020]
gi|432265196|gb|ELL20392.1| excinuclease ABC subunit C [Neisseria meningitidis NM3652]
gi|432266688|gb|ELL21870.1| excinuclease ABC subunit C [Neisseria meningitidis 2007056]
gi|432267103|gb|ELL22284.1| excinuclease ABC subunit C [Neisseria meningitidis NM3642]
gi|432271400|gb|ELL26525.1| excinuclease ABC subunit C [Neisseria meningitidis 2001212]
Length = 628
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|322434828|ref|YP_004217040.1| Tex-like protein [Granulicella tundricola MP5ACTX9]
gi|321162555|gb|ADW68260.1| Tex-like protein protein [Granulicella tundricola MP5ACTX9]
Length = 765
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 63 GSGGGGERLSSSARSFLSRSQAYALLKQQMEVA--AKTEDYKEAARIRDSLRSFEEEEPI 120
G G L A SF+ ++ A + + +E A E E A +R +LR+ +E +
Sbjct: 137 GQAAGALSLMDLAGSFIDEAKGVASIVEALEGARHIVAERIAETAELRKALRTLLHDEGV 196
Query: 121 FRLRRLMKEAVAEERFEDAARYRDKLKEIAPNSLL 155
R+ M A+E+F+ YR+ +K I + +L
Sbjct: 197 IVSRKAMDAVDAQEKFKMYYEYREPVKTIPSHRML 231
>gi|218768346|ref|YP_002342858.1| excinuclease ABC subunit C [Neisseria meningitidis Z2491]
gi|433479909|ref|ZP_20437199.1| excinuclease ABC subunit C [Neisseria meningitidis 63041]
gi|433520102|ref|ZP_20476822.1| excinuclease ABC subunit C [Neisseria meningitidis 65014]
gi|433541180|ref|ZP_20497632.1| excinuclease ABC subunit C [Neisseria meningitidis 63006]
gi|11278017|pir||G81845 excinuclease ABC subunit C NMA1540 [imported] - Neisseria
meningitidis (strain Z2491 serogroup A)
gi|121052354|emb|CAM08686.1| excinuclease ABC subunit C [Neisseria meningitidis Z2491]
gi|432216248|gb|ELK72130.1| excinuclease ABC subunit C [Neisseria meningitidis 63041]
gi|432254824|gb|ELL10158.1| excinuclease ABC subunit C [Neisseria meningitidis 65014]
gi|432277193|gb|ELL32242.1| excinuclease ABC subunit C [Neisseria meningitidis 63006]
Length = 628
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|24212618|sp|Q9JU21.2|UVRC_NEIMA RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName:
Full=Excinuclease ABC subunit C
Length = 617
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 191 EDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 242
>gi|326203325|ref|ZP_08193190.1| UvrB/UvrC protein [Clostridium papyrosolvens DSM 2782]
gi|325986583|gb|EGD47414.1| UvrB/UvrC protein [Clostridium papyrosolvens DSM 2782]
Length = 162
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 32 LEYGRRRRVGR-GCKDLTRTYG-----IVACVGGGGGGSGGGGERLSSSARSFLSRSQAY 85
+EY + R GC + + IV + G G G R+SS+ ++ +
Sbjct: 74 MEYDEFLKTSRLGCTQCYKAFADKLDPIVKRLHGNGEHHGKVPARVSSN----VNINNEI 129
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFE 115
LKQ + A K E Y+EAA+IRD ++S E
Sbjct: 130 DKLKQLLNEAVKAEKYEEAAKIRDRIKSLE 159
>gi|241760546|ref|ZP_04758639.1| excinuclease ABC subunit C [Neisseria flavescens SK114]
gi|241319050|gb|EER55552.1| excinuclease ABC subunit C [Neisseria flavescens SK114]
Length = 613
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 187 EDYRDSVREAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 238
>gi|225075863|ref|ZP_03719062.1| hypothetical protein NEIFLAOT_00886 [Neisseria flavescens
NRL30031/H210]
gi|224952809|gb|EEG34018.1| hypothetical protein NEIFLAOT_00886 [Neisseria flavescens
NRL30031/H210]
Length = 613
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 187 EDYRDSVREAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 238
>gi|385851079|ref|YP_005897594.1| excinuclease ABC subunit C [Neisseria meningitidis M04-240196]
gi|385853045|ref|YP_005899559.1| excinuclease ABC subunit C [Neisseria meningitidis H44/76]
gi|416182784|ref|ZP_11612220.1| excinuclease ABC, C subunit [Neisseria meningitidis M13399]
gi|416196356|ref|ZP_11618126.1| excinuclease ABC, C subunit [Neisseria meningitidis CU385]
gi|427828003|ref|ZP_18995022.1| excinuclease ABC, C subunit [Neisseria meningitidis H44/76]
gi|433465271|ref|ZP_20422753.1| excinuclease ABC subunit C [Neisseria meningitidis NM422]
gi|433488609|ref|ZP_20445771.1| excinuclease ABC subunit C [Neisseria meningitidis M13255]
gi|433490651|ref|ZP_20447777.1| excinuclease ABC subunit C [Neisseria meningitidis NM418]
gi|433505133|ref|ZP_20462072.1| excinuclease ABC subunit C [Neisseria meningitidis 9506]
gi|433507334|ref|ZP_20464242.1| excinuclease ABC subunit C [Neisseria meningitidis 9757]
gi|433509309|ref|ZP_20466178.1| excinuclease ABC subunit C [Neisseria meningitidis 12888]
gi|433511540|ref|ZP_20468367.1| excinuclease ABC subunit C [Neisseria meningitidis 4119]
gi|316984129|gb|EFV63107.1| excinuclease ABC, C subunit [Neisseria meningitidis H44/76]
gi|325134434|gb|EGC57079.1| excinuclease ABC, C subunit [Neisseria meningitidis M13399]
gi|325140450|gb|EGC62971.1| excinuclease ABC, C subunit [Neisseria meningitidis CU385]
gi|325200049|gb|ADY95504.1| excinuclease ABC, C subunit [Neisseria meningitidis H44/76]
gi|325205902|gb|ADZ01355.1| excinuclease ABC, C subunit [Neisseria meningitidis M04-240196]
gi|389605553|emb|CCA44470.1| UvrABC system protein C Protein uvrC; Excinuclease ABC subunit C
[Neisseria meningitidis alpha522]
gi|432203215|gb|ELK59269.1| excinuclease ABC subunit C [Neisseria meningitidis NM422]
gi|432223442|gb|ELK79223.1| excinuclease ABC subunit C [Neisseria meningitidis M13255]
gi|432227642|gb|ELK83351.1| excinuclease ABC subunit C [Neisseria meningitidis NM418]
gi|432241258|gb|ELK96788.1| excinuclease ABC subunit C [Neisseria meningitidis 9506]
gi|432241699|gb|ELK97228.1| excinuclease ABC subunit C [Neisseria meningitidis 9757]
gi|432246697|gb|ELL02143.1| excinuclease ABC subunit C [Neisseria meningitidis 12888]
gi|432247588|gb|ELL03025.1| excinuclease ABC subunit C [Neisseria meningitidis 4119]
Length = 628
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVREAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|366163203|ref|ZP_09462958.1| UvrB/UvrC protein [Acetivibrio cellulolyticus CD2]
Length = 164
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 32 LEYGRRRRVGR-GCKDLTRTYG-----IVACVGGGGGGSGGGGERLSSSARSFLSRSQAY 85
+ Y +++G+ GC++ + YG I+ + G G +++ + + S+
Sbjct: 75 MSYEEFKKIGKLGCENCYQVYGDKLMPILKRLHGNLQYHGKVPKKVYETVKV----SKEI 130
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFE 115
LK+Q++ A K+E+Y++AA IRD +R+ E
Sbjct: 131 DSLKEQLDKAVKSEEYEKAAEIRDKIRALE 160
>gi|416213176|ref|ZP_11622160.1| excinuclease ABC, C subunit [Neisseria meningitidis M01-240013]
gi|325144534|gb|EGC66833.1| excinuclease ABC, C subunit [Neisseria meningitidis M01-240013]
Length = 628
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVREAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|304387362|ref|ZP_07369554.1| excision endonuclease subunit UvrC [Neisseria meningitidis ATCC
13091]
gi|304338613|gb|EFM04731.1| excision endonuclease subunit UvrC [Neisseria meningitidis ATCC
13091]
Length = 628
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVREAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|18398438|ref|NP_566347.1| nuclear transport factor 2 (NTF2)-like protein [Arabidopsis
thaliana]
gi|6478918|gb|AAF14023.1|AC011436_7 unknown protein [Arabidopsis thaliana]
gi|17380786|gb|AAL36223.1| unknown protein [Arabidopsis thaliana]
gi|20259607|gb|AAM14160.1| unknown protein [Arabidopsis thaliana]
gi|21592811|gb|AAM64760.1| unknown [Arabidopsis thaliana]
gi|332641221|gb|AEE74742.1| nuclear transport factor 2 (NTF2)-like protein [Arabidopsis
thaliana]
Length = 244
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEE 117
LKQ +E A + E+Y EAA+IRD L+ +E+
Sbjct: 90 LKQDLETAVQEENYVEAAKIRDKLKELQED 119
>gi|56418611|ref|YP_145929.1| hypothetical protein GK0076 [Geobacillus kaustophilus HTA426]
gi|297528452|ref|YP_003669727.1| UvrB/UvrC protein [Geobacillus sp. C56-T3]
gi|448236386|ref|YP_007400444.1| activator of McsB [Geobacillus sp. GHH01]
gi|56378453|dbj|BAD74361.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|297251704|gb|ADI25150.1| UvrB/UvrC protein [Geobacillus sp. C56-T3]
gi|445205228|gb|AGE20693.1| activator of McsB [Geobacillus sp. GHH01]
Length = 182
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 29 SLDLEYGRRRRVGR-GCKDLTRTYG-----IVACVGGGGGGSGGGGERLSSSARSFLSRS 82
+ + Y + ++GR GC + RT+ I+ + G G ++ L
Sbjct: 82 TCQMTYHQFTQIGRFGCANCYRTFARYLPPILKRLHSGNTAHSG---KIPKRKGGVLHLR 138
Query: 83 QAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEE 117
+ A+LKQ+++ E+++ AA +RD +RS E+E
Sbjct: 139 KQLAMLKQKLQELVAREEFERAAEVRDQIRSLEDE 173
>gi|15677192|ref|NP_274345.1| excinuclease ABC subunit C [Neisseria meningitidis MC58]
gi|24212619|sp|Q9JZ26.1|UVRC_NEIMB RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName:
Full=Excinuclease ABC subunit C
gi|7226569|gb|AAF41701.1| excinuclease ABC, subunit C [Neisseria meningitidis MC58]
Length = 617
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 191 EDYRDSVREAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 242
>gi|421565529|ref|ZP_16011302.1| excinuclease ABC subunit C [Neisseria meningitidis NM3081]
gi|433536945|ref|ZP_20493450.1| excinuclease ABC subunit C [Neisseria meningitidis 77221]
gi|402343964|gb|EJU79106.1| excinuclease ABC subunit C [Neisseria meningitidis NM3081]
gi|432273881|gb|ELL28978.1| excinuclease ABC subunit C [Neisseria meningitidis 77221]
Length = 628
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVREAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|302844992|ref|XP_002954035.1| hypothetical protein VOLCADRAFT_106212 [Volvox carteri f.
nagariensis]
gi|300260534|gb|EFJ44752.1| hypothetical protein VOLCADRAFT_106212 [Volvox carteri f.
nagariensis]
Length = 1401
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 33/55 (60%)
Query: 91 QMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDK 145
++ A + E Y +AAR + L+ + + + ++R ++EA+A E++ AA RD+
Sbjct: 334 ELNTAVRQEQYGDAARFKRKLQEIQSSDTVASVQRQLQEALATEQYGAAADLRDR 388
>gi|334185186|ref|NP_001189845.1| nuclear transport factor 2 (NTF2)-like protein [Arabidopsis
thaliana]
gi|332641222|gb|AEE74743.1| nuclear transport factor 2 (NTF2)-like protein [Arabidopsis
thaliana]
Length = 246
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEE 117
LKQ +E A + E+Y EAA+IRD L+ +E+
Sbjct: 76 LKQDLETAVQEENYVEAAKIRDKLKELQED 105
>gi|259490458|ref|NP_001159303.1| uncharacterized protein LOC100304395 [Zea mays]
gi|223943289|gb|ACN25728.1| unknown [Zea mays]
gi|413933986|gb|AFW68537.1| hypothetical protein ZEAMMB73_115279 [Zea mays]
gi|413933987|gb|AFW68538.1| hypothetical protein ZEAMMB73_115279 [Zea mays]
Length = 699
Score = 36.6 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 34/57 (59%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRD 144
L+ Q++ + EDY+ A ++R ++ + + + + R + A+ EER++DAA RD
Sbjct: 163 LQLQLQASVYREDYRSAHKLRLAIATIVKNDTVGRAVSDLNMAIDEERYKDAAYIRD 219
>gi|375006888|ref|YP_004980518.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359285734|gb|AEV17418.1| hypothetical protein GTCCBUS3UF5_890 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 170
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 29 SLDLEYGRRRRVGR-GCKDLTRTYG-----IVACVGGGGGGSGGGGERLSSSARSFLSRS 82
+ + Y + ++GR GC + RT+ I+ + G G ++ L
Sbjct: 70 TCQMTYHQFTQIGRFGCANCYRTFARYLPPILKRLHSGNTAHSG---KIPKRKGGVLHLR 126
Query: 83 QAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEE 117
+ A+LKQ+++ E+++ AA +RD +RS E+E
Sbjct: 127 KQLAMLKQKLQELVAREEFERAAEVRDQIRSLEDE 161
>gi|385328592|ref|YP_005882895.1| excinuclease ABC subunit C [Neisseria meningitidis alpha710]
gi|385341758|ref|YP_005895629.1| excinuclease ABC subunit C [Neisseria meningitidis M01-240149]
gi|385857396|ref|YP_005903908.1| excinuclease ABC subunit C [Neisseria meningitidis NZ-05/33]
gi|416170502|ref|ZP_11608350.1| excinuclease ABC, C subunit [Neisseria meningitidis OX99.30304]
gi|416187662|ref|ZP_11614274.1| excinuclease ABC, C subunit [Neisseria meningitidis M0579]
gi|308389444|gb|ADO31764.1| excinuclease ABC subunit C [Neisseria meningitidis alpha710]
gi|325130436|gb|EGC53200.1| excinuclease ABC, C subunit [Neisseria meningitidis OX99.30304]
gi|325136171|gb|EGC58779.1| excinuclease ABC, C subunit [Neisseria meningitidis M0579]
gi|325201964|gb|ADY97418.1| excinuclease ABC, C subunit [Neisseria meningitidis M01-240149]
gi|325208285|gb|ADZ03737.1| excinuclease ABC, C subunit [Neisseria meningitidis NZ-05/33]
Length = 628
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY ++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYHDSVREASTFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|430747497|ref|YP_007206626.1| hypothetical protein Sinac_6871 [Singulisphaera acidiphila DSM
18658]
gi|430019217|gb|AGA30931.1| uncharacterized protein with conserved CXXC pairs [Singulisphaera
acidiphila DSM 18658]
Length = 253
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSL 111
L+QQ+E+A EDY+EAARIRD L
Sbjct: 214 LEQQLELAVALEDYEEAARIRDQL 237
>gi|376259727|ref|YP_005146447.1| hypothetical protein [Clostridium sp. BNL1100]
gi|373943721|gb|AEY64642.1| putative protein with conserved CXXC pairs [Clostridium sp.
BNL1100]
Length = 162
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 32 LEYGRRRRVGR-GCKDLTRTYG-----IVACVGGGGGGSGGGGERLSSSARSFLSRSQAY 85
+EY + R GC + + IV + G G G R+SS+ ++ +
Sbjct: 74 MEYDEFLKTSRLGCTQCYKAFADKLDPIVKRLHGNGEHHGKVPARVSSN----VNINNEI 129
Query: 86 ALLKQQMEVAAKTEDYKEAARIRDSLRSFE 115
LKQ + A K E Y+EAA+IRD ++S E
Sbjct: 130 DKLKQLLNEAIKAEKYEEAAKIRDRIKSLE 159
>gi|406666959|ref|ZP_11074722.1| hypothetical protein B857_02547 [Bacillus isronensis B3W22]
gi|405385242|gb|EKB44678.1| hypothetical protein B857_02547 [Bacillus isronensis B3W22]
Length = 180
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 117 EEPIFRLRRLMKEAVAEERFEDAARYRDKLKEI 149
E+ I LR +++A+ EERFEDAA RD+++E+
Sbjct: 136 EQQIQELRSSLQQAIEEERFEDAASIRDEVREL 168
>gi|393198910|ref|YP_006460752.1| hypothetical protein SSIL_0183 [Solibacillus silvestris StLB046]
gi|327438241|dbj|BAK14606.1| uncharacterized protein with conserved CXXC pairs [Solibacillus
silvestris StLB046]
Length = 180
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 117 EEPIFRLRRLMKEAVAEERFEDAARYRDKLKEI 149
E+ I LR +++A+ EERFEDAA RD+++E+
Sbjct: 136 EQQIQELRSSLQQAIEEERFEDAASIRDEVREL 168
>gi|296314486|ref|ZP_06864427.1| excinuclease ABC subunit C [Neisseria polysaccharea ATCC 43768]
gi|296838789|gb|EFH22727.1| excinuclease ABC subunit C [Neisseria polysaccharea ATCC 43768]
Length = 628
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY+++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYRDSVREAVTFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|297829456|ref|XP_002882610.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297328450|gb|EFH58869.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 244
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEE 117
LKQ +E A + E+Y EAA+IRD L+ +E+
Sbjct: 90 LKQDLETAIQEENYVEAAKIRDKLKELQED 119
>gi|121602199|ref|YP_989264.1| excinuclease ABC subunit B [Bartonella bacilliformis KC583]
gi|421761068|ref|ZP_16197873.1| excinuclease ABC subunit B [Bartonella bacilliformis INS]
gi|120614376|gb|ABM44977.1| excinuclease ABC, B subunit [Bartonella bacilliformis KC583]
gi|411173478|gb|EKS43522.1| excinuclease ABC subunit B [Bartonella bacilliformis INS]
Length = 780
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 120 IFRLRRLMKEAVAEERFEDAARYRDKLKEI 149
I RL +LM+EA A+ FE+AAR RD +K++
Sbjct: 726 IKRLEKLMREAAADLNFEEAARLRDNIKQL 755
>gi|50556530|ref|XP_505673.1| YALI0F20658p [Yarrowia lipolytica]
gi|49651543|emb|CAG78482.1| YALI0F20658p [Yarrowia lipolytica CLIB122]
Length = 1143
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 98 TEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAV----AEERFEDAARYRDKLKEIAPNS 153
T +YKEA I +SL +EE ++ +EA+ A E FED R RD E+AP
Sbjct: 825 TREYKEAGIIYESLEKWEEALEAYKAGVYWEEALCLCHAVEGFED--RVRDVADELAPQL 882
Query: 154 L-LKCLSDATTL 164
+ C +A+TL
Sbjct: 883 VSAHCYKEASTL 894
>gi|421544617|ref|ZP_15990693.1| excinuclease ABC subunit C [Neisseria meningitidis NM140]
gi|421546732|ref|ZP_15992777.1| excinuclease ABC subunit C [Neisseria meningitidis NM183]
gi|421548984|ref|ZP_15995008.1| excinuclease ABC subunit C [Neisseria meningitidis NM2781]
gi|421552935|ref|ZP_15998907.1| excinuclease ABC subunit C [Neisseria meningitidis NM576]
gi|402322977|gb|EJU58427.1| excinuclease ABC subunit C [Neisseria meningitidis NM183]
gi|402323808|gb|EJU59250.1| excinuclease ABC subunit C [Neisseria meningitidis NM140]
gi|402325663|gb|EJU61072.1| excinuclease ABC subunit C [Neisseria meningitidis NM2781]
gi|402330114|gb|EJU65463.1| excinuclease ABC subunit C [Neisseria meningitidis NM576]
Length = 628
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY ++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYHDSVREASTFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|385340233|ref|YP_005894105.1| excinuclease ABC subunit C [Neisseria meningitidis G2136]
gi|433467472|ref|ZP_20424926.1| excinuclease ABC subunit C [Neisseria meningitidis 87255]
gi|325198477|gb|ADY93933.1| excinuclease ABC, C subunit [Neisseria meningitidis G2136]
gi|432202306|gb|ELK58370.1| excinuclease ABC subunit C [Neisseria meningitidis 87255]
Length = 628
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 99 EDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEIA 150
EDY ++ R + + + +E L+ M+ A A +FE+AARYRD+++ +
Sbjct: 202 EDYHDSVREASTFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALG 253
>gi|29840717|ref|NP_829823.1| excinuclease ABC subunit B [Chlamydophila caviae GPIC]
gi|33301869|sp|Q821H8.1|UVRB_CHLCV RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName:
Full=Excinuclease ABC subunit B
gi|29835067|gb|AAP05701.1| excinuclease ABC, subunit B [Chlamydophila caviae GPIC]
Length = 656
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 102 KEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLK 147
+E A+ S++ E E+ I + LM+EA E RF++AA+YRDK+K
Sbjct: 603 QEPAKTPLSIK--ELEKLIKKFENLMQEAAHEFRFDEAAKYRDKMK 646
>gi|419670463|ref|ZP_14200153.1| excinuclease ABC subunit C [Campylobacter jejuni subsp. jejuni
1997-14]
gi|380650605|gb|EIB67227.1| excinuclease ABC subunit C [Campylobacter jejuni subsp. jejuni
1997-14]
Length = 600
Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 69 ERLSSSARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEE 118
E L + R+ L+ S L++QM + A+ E+Y+EAA++RD + + ++ E
Sbjct: 190 EILDEAMRALLNPSILLKNLEKQMLILAQNENYEEAAKVRDQIATIKDLE 239
>gi|373252815|ref|ZP_09540933.1| excinuclease ABC subunit C [Nesterenkonia sp. F]
Length = 688
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 122 RLRRLMKEAVAEERFEDAARYRDKLKEI 149
R+ MKEAVAE R+EDAAR+RD L+ +
Sbjct: 213 RIEAQMKEAVAELRYEDAARHRDDLEAL 240
>gi|354603872|ref|ZP_09021865.1| excinuclease ABC, C subunit [Alistipes indistinctus YIT 12060]
gi|353348304|gb|EHB92576.1| excinuclease ABC, C subunit [Alistipes indistinctus YIT 12060]
Length = 629
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 123 LRRLMKEAVAEERFEDAARYRDKLKEIA 150
L+RLM EA AE RFEDA RY+ +L +A
Sbjct: 218 LQRLMNEAAAEMRFEDAGRYKKRLDLLA 245
>gi|154413052|ref|XP_001579557.1| UvrB/uvrC motif family protein [Trichomonas vaginalis G3]
gi|121913765|gb|EAY18571.1| UvrB/uvrC motif family protein [Trichomonas vaginalis G3]
Length = 686
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 52 GIVACVGGGGGGSGGGGERLSSSARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSL 111
GIV+ G GG +R ++ L Q L++Q A ED+ EA I+ L
Sbjct: 137 GIVSLKILGNGGRPASSQRPTTPE---LDLEQEINKLERQKADAVAREDFSEANNIKIRL 193
Query: 112 RSFE-EEEPIFRLRRLMKEAVAEERFEDAARYRDKLK 147
+ ++E + L++ EA+A E FE A D+LK
Sbjct: 194 NELKSQKETLENLKKRKAEAIAAEDFEMARIVNDQLK 230
>gi|307718922|ref|YP_003874454.1| hypothetical protein STHERM_c12400 [Spirochaeta thermophila DSM
6192]
gi|386347011|ref|YP_006045260.1| UvrB/UvrC protein [Spirochaeta thermophila DSM 6578]
gi|306532647|gb|ADN02181.1| hypothetical protein STHERM_c12400 [Spirochaeta thermophila DSM
6192]
gi|339411978|gb|AEJ61543.1| UvrB/UvrC protein [Spirochaeta thermophila DSM 6578]
Length = 172
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 65 GGGGERLSSSARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEE 117
G R ++ R + R + LK+ +E A + EDY+ AARIRD LR EE+
Sbjct: 118 GSVPRRFNTVKRILMDRMR----LKRSLEHAIRNEDYERAARIRDRLRELEED 166
>gi|253681453|ref|ZP_04862250.1| UVR domain protein [Clostridium botulinum D str. 1873]
gi|416353733|ref|ZP_11681573.1| hypothetical protein CBCST_09641 [Clostridium botulinum C str.
Stockholm]
gi|253561165|gb|EES90617.1| UVR domain protein [Clostridium botulinum D str. 1873]
gi|338195507|gb|EGO87779.1| hypothetical protein CBCST_09641 [Clostridium botulinum C str.
Stockholm]
Length = 172
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 43 GCKDLTRTYG--IVACVGGGGGGSGGGGERLSSSARSFLSRSQAYALLKQQMEVAAKTED 100
GC + + + I++ V G G + G+ S + +++++ L K++++ A E+
Sbjct: 95 GCSECYKYFSPDILSVVKGVQGNTEHIGKIPKKSGKDLVNKNKILKL-KEELQKAIALEE 153
Query: 101 YKEAARIRDSLRSFEEE 117
Y++AA IRD++R ++E
Sbjct: 154 YEKAAEIRDAIRDIDKE 170
>gi|78185264|ref|YP_377699.1| hypothetical protein Syncc9902_1697 [Synechococcus sp. CC9902]
gi|78169558|gb|ABB26655.1| conserved hypothetical protein [Synechococcus sp. CC9902]
Length = 269
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 71 LSSSARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEA 130
LS SFL S A +L Q + +T+D +A ++ D L + E P R R L++
Sbjct: 12 LSLVGASFLGWSLAASLSSQTSAITNRTDDDLQAEQLLDRLEAQGELAPNTR-RTLLERL 70
Query: 131 VAEERFEDAARYRDKLKEIAPNSL 154
+A+ RFEDA R + P SL
Sbjct: 71 LAQGRFEDALRVLQPWRAEQPRSL 94
>gi|168019800|ref|XP_001762432.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686510|gb|EDQ72899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 91 QMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDK 145
Q+E A ED+++A RI+ L + + E+ + K A+ EER+ DAA RD+
Sbjct: 16 QIEEAINLEDFEKAGRIKKKLAAVKSEDLVAGAMSDYKNALEEERYRDAAYLRDE 70
>gi|424513019|emb|CCO66603.1| predicted protein [Bathycoccus prasinos]
Length = 1088
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 83 QAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARY 142
+A L Q+ A EDY A+ IRD++ + +P ++RR A+ E + AA++
Sbjct: 278 EALVALNGQLAEAIDVEDYGRASTIRDAIEAALTVDPAMKIRRGFLRALETEDYGAAAKF 337
Query: 143 RD 144
RD
Sbjct: 338 RD 339
>gi|299541897|ref|ZP_07052220.1| hypothetical protein BFZC1_23144 [Lysinibacillus fusiformis ZC1]
gi|424739337|ref|ZP_18167756.1| hypothetical protein C518_3871 [Lysinibacillus fusiformis ZB2]
gi|298725635|gb|EFI66276.1| hypothetical protein BFZC1_23144 [Lysinibacillus fusiformis ZC1]
gi|422946734|gb|EKU41140.1| hypothetical protein C518_3871 [Lysinibacillus fusiformis ZB2]
Length = 180
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 23/27 (85%)
Query: 123 LRRLMKEAVAEERFEDAARYRDKLKEI 149
+R+ MK AV EE+FE+AA+ RD++KE+
Sbjct: 142 IRKRMKSAVDEEQFEEAAKLRDEVKEL 168
>gi|311742833|ref|ZP_07716641.1| DNA polymerase III epsilon subunit [Aeromicrobium marinum DSM
15272]
gi|311313513|gb|EFQ83422.1| DNA polymerase III epsilon subunit [Aeromicrobium marinum DSM
15272]
Length = 569
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 103 EAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEI 149
E R+R +L + + E + R+ M++ A+ERFEDAA +RD+L+ +
Sbjct: 407 EVGRVRSALTA-DPVEVVDRIGDRMRDLAADERFEDAALWRDRLQAL 452
>gi|406933517|gb|EKD68150.1| hypothetical protein ACD_48C00059G0002 [uncultured bacterium]
Length = 490
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 110 SLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLKEI 149
S+ S +++ I +L+ LMK+A+ FE AA YRD+++E+
Sbjct: 449 SMTSMDKQREIKKLQLLMKKAIKNLYFEQAAEYRDRIEEL 488
>gi|392402924|ref|YP_006439536.1| protein of unknown function DUF151 [Turneriella parva DSM 21527]
gi|390610878|gb|AFM12030.1| protein of unknown function DUF151 [Turneriella parva DSM 21527]
Length = 229
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Query: 78 FLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRS 113
FLSRS+ +L+Q ++ A E+Y+EAAR+RD LR+
Sbjct: 193 FLSRSE---VLQQMLKTALGRENYEEAARLRDELRT 225
>gi|317471948|ref|ZP_07931281.1| excinuclease ABC [Anaerostipes sp. 3_2_56FAA]
gi|316900585|gb|EFV22566.1| excinuclease ABC [Anaerostipes sp. 3_2_56FAA]
Length = 661
Score = 35.0 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 88 LKQQMEVAAKTEDYKEAARIRDSLRSFEEEEPIFRLRRLMKEAVAEERFEDAARYRDKLK 147
++ ++++ + E + + +S+ E +E I RL + M A AE FE+AA RD+LK
Sbjct: 591 IRDLIKISDEEEAEQSNEKDIESMNKKELKENIERLTKKMNRAAAELNFEEAAALRDELK 650
Query: 148 E 148
E
Sbjct: 651 E 651
>gi|183221685|ref|YP_001839681.1| hypothetical protein LEPBI_I2310 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911759|ref|YP_001963314.1| hypothetical protein LBF_2240 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776435|gb|ABZ94736.1| conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780107|gb|ABZ98405.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 191
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 68 GERLSSSARSFLSRSQAYALLKQQMEVAAKTEDYKEAARIRDSLRSFEE 116
GE +SS + +L++ +E A KTEDY+ AA+IRD ++ E
Sbjct: 141 GENISSEKKIQALPKSNLQILEETLENALKTEDYETAAKIRDQIKKLIE 189
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,456,114,016
Number of Sequences: 23463169
Number of extensions: 100294947
Number of successful extensions: 1360990
Number of sequences better than 100.0: 614
Number of HSP's better than 100.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 309
Number of HSP's that attempted gapping in prelim test: 1356723
Number of HSP's gapped (non-prelim): 2893
length of query: 170
length of database: 8,064,228,071
effective HSP length: 130
effective length of query: 40
effective length of database: 9,308,983,397
effective search space: 372359335880
effective search space used: 372359335880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)