Query 030840
Match_columns 170
No_of_seqs 102 out of 151
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 08:08:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030840.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030840hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1l5ja1 a.118.15.1 (A:1-160) A 37.5 14 0.001 26.8 3.7 17 102-118 7-23 (160)
2 d2f6ma1 a.2.17.1 (A:322-385) V 32.2 39 0.0029 20.7 4.7 43 58-100 17-59 (64)
3 d1uptb_ a.193.1.1 (B:) Golgi a 22.4 32 0.0024 20.8 2.8 31 63-98 25-55 (58)
4 d1eexb_ c.51.3.1 (B:) Diol deh 13.0 41 0.003 24.6 1.8 15 103-117 125-139 (178)
5 d1iwpb_ c.51.3.1 (B:) Diol deh 11.5 49 0.0036 24.3 1.8 15 103-117 127-141 (184)
6 d1bh9b_ a.22.1.3 (B:) TAF(II)2 10.6 1.1E+02 0.008 19.6 3.3 34 133-166 8-53 (89)
7 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 9.2 2.1E+02 0.015 17.3 4.2 41 49-89 22-66 (67)
8 d1ezfa_ a.128.1.2 (A:) Squalen 7.7 1.6E+02 0.011 22.5 3.7 26 141-166 129-154 (333)
9 d1fxkc_ a.2.5.1 (C:) Prefoldin 7.4 2.8E+02 0.021 17.5 6.4 25 49-73 73-101 (133)
10 d3e46a1 a.5.2.1 (A:157-198) Ub 6.8 1.1E+02 0.0079 16.8 1.6 23 145-167 5-27 (42)
No 1
>d1l5ja1 a.118.15.1 (A:1-160) Aconitase B, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=37.54 E-value=14 Score=26.81 Aligned_cols=17 Identities=29% Similarity=0.431 Sum_probs=13.7
Q ss_pred HhhHHHHHcCCCCCCCC
Q 030840 102 DENKARKAAGEEPLPEE 118 (170)
Q Consensus 102 ~EN~~R~~~Ge~pLPee 118 (170)
.|=+.|++.|-||+|-+
T Consensus 7 ~~i~eR~~~GlpPlPLd 23 (160)
T d1l5ja1 7 KHVAERAAEGIAPKPLD 23 (160)
T ss_dssp HHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHCCCCCCCCC
Confidence 45567889999999994
No 2
>d2f6ma1 a.2.17.1 (A:322-385) Vacuolar protein sorting-associated protein 23, VPS23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.16 E-value=39 Score=20.71 Aligned_cols=43 Identities=23% Similarity=0.199 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030840 58 LERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKR 100 (170)
Q Consensus 58 Lek~le~L~~~vD~l~~Eq~k~~~yqR~~~rqq~~~~q~~~kR 100 (170)
+|..+..|-+.+..=.-+-.-|-+.-|.++|+|--.-..++|=
T Consensus 17 ieDaiy~L~~aL~~G~I~~d~ylK~vR~LaReQF~~RAl~~KI 59 (64)
T d2f6ma1 17 LTDTIEALSRMLHRGTIPLDTFVKQGRELARQQFLVRWHIQRI 59 (64)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555566789999999999988766665553
No 3
>d1uptb_ a.193.1.1 (B:) Golgi autoantigen, golgin-245 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.44 E-value=32 Score=20.79 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=21.3
Q ss_pred HHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030840 63 EFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQ 98 (170)
Q Consensus 63 e~L~~~vD~l~~Eq~k~~~yqR~~~rqq~~~~q~~~ 98 (170)
--.+-.|=-+..+| -|+-+.|++++..+|++
T Consensus 25 aKVi~av~kF~~~Q-----~q~iL~kE~~r~~swl~ 55 (58)
T d1uptb_ 25 AKVITTVLKFPDDQ-----TQKILEREDARLMSWLR 55 (58)
T ss_dssp HHHHHHHTTCCHHH-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHH-----HHHHHHHHhcchhhHHh
Confidence 33344444455554 47889999999999986
No 4
>d1eexb_ c.51.3.1 (B:) Diol dehydratase, beta subunit {Klebsiella oxytoca [TaxId: 571]}
Probab=12.99 E-value=41 Score=24.63 Aligned_cols=15 Identities=47% Similarity=0.581 Sum_probs=12.7
Q ss_pred hhHHHHHcCCCCCCC
Q 030840 103 ENKARKAAGEEPLPE 117 (170)
Q Consensus 103 EN~~R~~~Ge~pLPe 117 (170)
-||+|-++||.|.|-
T Consensus 125 ~NAARlvKG~~p~Pv 139 (178)
T d1eexb_ 125 KNAARYAKRESPQPV 139 (178)
T ss_dssp HHHHHHHTTCCCCCC
T ss_pred HHHHHHhccCCCCCc
Confidence 389999999988765
No 5
>d1iwpb_ c.51.3.1 (B:) Diol dehydratase, beta subunit {Klebsiella pneumoniae [TaxId: 573]}
Probab=11.46 E-value=49 Score=24.32 Aligned_cols=15 Identities=47% Similarity=0.563 Sum_probs=12.7
Q ss_pred hhHHHHHcCCCCCCC
Q 030840 103 ENKARKAAGEEPLPE 117 (170)
Q Consensus 103 EN~~R~~~Ge~pLPe 117 (170)
-||+|-++|+.|.|-
T Consensus 127 ~NAARlvKG~~p~Pv 141 (184)
T d1iwpb_ 127 KNAARYARKESPSPV 141 (184)
T ss_dssp HHHHHHHTTCCCCCC
T ss_pred HHHHHHhcCCCCCCc
Confidence 389999999988665
No 6
>d1bh9b_ a.22.1.3 (B:) TAF(II)28 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.64 E-value=1.1e+02 Score=19.58 Aligned_cols=34 Identities=18% Similarity=0.398 Sum_probs=21.2
Q ss_pred chHHH----HHHHHHHHHHHHHHh--------hHHHHHHHHHHHHh
Q 030840 133 RLESF----LIANRIANYCNQING--------VTGQSFSRLYLTKA 166 (170)
Q Consensus 133 RL~sl----L~s~Qi~~yc~qi~~--------~~~~~l~Klfl~~~ 166 (170)
|+|++ +--..|..++.++.+ .+-.+++|+|+.+-
T Consensus 8 RyE~fRRs~~~K~~vkrl~~~~~g~sv~~~v~i~v~giaKvFvGEi 53 (89)
T d1bh9b_ 8 RYEMYRRSAFPKAAIKRLIQSITGTSVSQNVVIAMSGISKVFVGEV 53 (89)
T ss_dssp HHHHHHHCCCCHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHHHHH
Confidence 45555 445566666666543 34578999998753
No 7
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.19 E-value=2.1e+02 Score=17.34 Aligned_cols=41 Identities=20% Similarity=0.304 Sum_probs=26.1
Q ss_pred ccCCCCChhHHHHHHHHHHhHHHh----HHHHHHHHHHHHHHHHH
Q 030840 49 RLQLSSSPFLERNMEFLIECMDDL----SVEQQKFQFYYRSLTRQ 89 (170)
Q Consensus 49 ~L~ls~~~~Lek~le~L~~~vD~l----~~Eq~k~~~yqR~~~rq 89 (170)
...|.+-.-+|.-|+..=.+|..| +.|.-+..|.|--++|+
T Consensus 22 ~m~l~sV~diE~eLerCk~~irrLeqel~~ErF~~iYLQt~LA~e 66 (67)
T d1k1fa_ 22 RMELRSVGDIEQELERAKASIRRLEQEVNQERFRMIYLQTLLAKE 66 (67)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cchhccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 445555556777777666666554 55556677777777664
No 8
>d1ezfa_ a.128.1.2 (A:) Squalene synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.67 E-value=1.6e+02 Score=22.50 Aligned_cols=26 Identities=27% Similarity=0.661 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHh
Q 030840 141 NRIANYCNQINGVTGQSFSRLYLTKA 166 (170)
Q Consensus 141 ~Qi~~yc~qi~~~~~~~l~Klfl~~~ 166 (170)
.+.+.||..+.+..|.-++++|....
T Consensus 129 ~dL~~Ycy~VAG~VG~~l~~l~~~~~ 154 (333)
T d1ezfa_ 129 QEWDKYCHYVAGLVGIGLSRLFSASE 154 (333)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCC
Confidence 46789999999999999999997643
No 9
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=7.40 E-value=2.8e+02 Score=17.53 Aligned_cols=25 Identities=16% Similarity=0.232 Sum_probs=11.3
Q ss_pred ccCCCCChhH----HHHHHHHHHhHHHhH
Q 030840 49 RLQLSSSPFL----ERNMEFLIECMDDLS 73 (170)
Q Consensus 49 ~L~ls~~~~L----ek~le~L~~~vD~l~ 73 (170)
..++|++-|+ ++-++.+-..++.+.
T Consensus 73 lV~lG~g~~vE~~~~eA~~~l~~ri~~l~ 101 (133)
T d1fxkc_ 73 IMSVGAGVAIKKNFEDAMESIKSQKNELE 101 (133)
T ss_dssp EEEEETTEEEEEEHHHHHHHHHHHHHHHH
T ss_pred EEEecCCeeeeecHHHHHHHHHHHHHHHH
Confidence 3466665442 233444444444443
No 10
>d3e46a1 a.5.2.1 (A:157-198) Ubiquitin-conjugating enzyme E2-25 kDa, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.82 E-value=1.1e+02 Score=16.79 Aligned_cols=23 Identities=26% Similarity=0.446 Sum_probs=17.0
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhh
Q 030840 145 NYCNQINGVTGQSFSRLYLTKAL 167 (170)
Q Consensus 145 ~yc~qi~~~~~~~l~Klfl~~~l 167 (170)
.|...|...|+.+|-|--+.-||
T Consensus 5 eyt~kidklca~gf~knavi~al 27 (42)
T d3e46a1 5 EYTKKIENLCAAGFDRNAVIVAL 27 (42)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHccccccceeeee
Confidence 58888999999888875554444
Done!