BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030843
(170 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M4T8|PSA5_SOYBN Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1
Length = 237
Score = 348 bits (892), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 165/170 (97%), Positives = 168/170 (98%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
EESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCN KAIGSGSEGADSSLQEQ+NKDL
Sbjct: 128 EESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFNKDL 187
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 170
TLQEAETIALSILKQVMEEKVTPNNVDIA+VAPTYHLYTPSEVEAVI+RL
Sbjct: 188 TLQEAETIALSILKQVMEEKVTPNNVDIAKVAPTYHLYTPSEVEAVISRL 237
>sp|Q9LSU1|PSA5_ORYSJ Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica
GN=PAE1 PE=2 SV=1
Length = 237
Score = 343 bits (879), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 162/170 (95%), Positives = 167/170 (98%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA+CDLALRFGEGD
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGD 127
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
EESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNK+L
Sbjct: 128 EESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKEL 187
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 170
TLQEAETIALSILKQVMEEKVTPNNVDIA+V+P YHLYTP+EVEAVI RL
Sbjct: 188 TLQEAETIALSILKQVMEEKVTPNNVDIAKVSPNYHLYTPAEVEAVIARL 237
>sp|Q42134|PSA5B_ARATH Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2
PE=1 SV=2
Length = 237
Score = 341 bits (874), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 160/170 (94%), Positives = 167/170 (98%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
MEID+HIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEG+
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
EESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQ+NKD+
Sbjct: 128 EESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDI 187
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 170
TLQEAETIA+SILKQVMEEKVTPNNVDIA+VAP YHLYTP EVEAVI+RL
Sbjct: 188 TLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVISRL 237
>sp|O81149|PSA5A_ARATH Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1
PE=1 SV=1
Length = 237
Score = 340 bits (871), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 160/170 (94%), Positives = 166/170 (97%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
MEID+HIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEG+
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
EESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQ+NKDL
Sbjct: 128 EESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDL 187
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 170
+LQEAETIA+SILKQVMEEKVTPNNVDIA+VAP YHLYTP EVEAVI RL
Sbjct: 188 SLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVIARL 237
>sp|Q55G04|PSA5_DICDI Proteasome subunit alpha type-5 OS=Dictyostelium discoideum
GN=psmA5 PE=3 SV=1
Length = 241
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 136/176 (77%), Gaps = 6/176 (3%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+EID H+ CA+SGL+ADART+++HAR+ETQNHRF+Y EPM VES Q++CDLALRFGE
Sbjct: 65 VEIDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRFGENR 124
Query: 61 ---EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 117
EE MSRPFGV+LLIAG DE GPSLYY+DPSGTF Q +AKAIG+GSEGA ++LQE+Y+
Sbjct: 125 NSGEERMSRPFGVALLIAGIDEKGPSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQEKYS 184
Query: 118 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT---YHLYTPSEVEAVINRL 170
K LT+ E + +AL+ LKQVMEE +T NV++A + + +Y E+ VI L
Sbjct: 185 KTLTIAECQKLALTTLKQVMEEAITTTNVELAVITKADQKFKIYNKEELATVIQTL 240
>sp|Q9UT97|PSA5_SCHPO Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pup2 PE=1 SV=1
Length = 247
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/174 (59%), Positives = 136/174 (78%), Gaps = 5/174 (2%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
EID HIGCA+SGL ADART++EHARV+TQNHRF+Y EP +ESTTQ++CDLALRFGEG+
Sbjct: 68 FEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGE 127
Query: 61 ---EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 117
E MSRPFGV+LLIAG DE+GP LY+++PSGT+++ AKAIGSGSE A S L ++++
Sbjct: 128 DGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFH 187
Query: 118 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT--YHLYTPSEVEAVINR 169
KD+TL+EAE + L +L+QVMEEK+ NV +A+V +H+Y E+ + R
Sbjct: 188 KDMTLEEAEVLILKVLRQVMEEKLDSKNVQLAKVTAEGGFHIYNDEEMADAVAR 241
>sp|Q9Z2U1|PSA5_MOUSE Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1
Length = 241
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 135/174 (77%), Gaps = 4/174 (2%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LAL+FGE D
Sbjct: 68 VEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEED 127
Query: 61 EE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNK 118
+ +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS SEGA SSLQE Y+K
Sbjct: 128 ADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHK 187
Query: 119 DLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVINRL 170
+TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI +
Sbjct: 188 SMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI 241
>sp|P28066|PSA5_HUMAN Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3
Length = 241
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 135/174 (77%), Gaps = 4/174 (2%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LAL+FGE D
Sbjct: 68 VEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEED 127
Query: 61 EE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNK 118
+ +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS SEGA SSLQE Y+K
Sbjct: 128 ADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHK 187
Query: 119 DLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVINRL 170
+TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI +
Sbjct: 188 SMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI 241
>sp|Q5E987|PSA5_BOVIN Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1
Length = 241
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 135/174 (77%), Gaps = 4/174 (2%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LAL+FGE D
Sbjct: 68 VEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEED 127
Query: 61 EE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNK 118
+ +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS SEGA SSLQE Y+K
Sbjct: 128 ADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHK 187
Query: 119 DLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVINRL 170
+TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI +
Sbjct: 188 SMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI 241
>sp|P34064|PSA5_RAT Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2
SV=1
Length = 241
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 134/174 (77%), Gaps = 4/174 (2%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LAL+FGE D
Sbjct: 68 VEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEED 127
Query: 61 EE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNK 118
+ +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS SEGA SSLQE Y+K
Sbjct: 128 ADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHK 187
Query: 119 DLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVINRL 170
TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI +
Sbjct: 188 STTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI 241
>sp|Q94561|PSA5_ENTHI Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2
Length = 247
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/153 (62%), Positives = 118/153 (77%), Gaps = 2/153 (1%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+EID+HIG A+SGL ADARTL+++AR+E QNHRF Y EP+ VE QA+ DL+LRFGEG
Sbjct: 68 IEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGS 127
Query: 61 EES--MSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNK 118
+ MSRPFGV+LLIAG DE GP L+ TDPSG F + AKA G+G+E A S L E+YNK
Sbjct: 128 RKKKVMSRPFGVALLIAGVDETGPRLFQTDPSGMFIEFYAKATGAGTEAAQSILHEKYNK 187
Query: 119 DLTLQEAETIALSILKQVMEEKVTPNNVDIARV 151
+TL+EAE +ALS LKQVMEEK+ NV++A V
Sbjct: 188 SMTLREAEILALSTLKQVMEEKLNSKNVEVALV 220
>sp|Q9XZG5|PSA5_TRYBB Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3
SV=1
Length = 246
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 132/174 (75%), Gaps = 5/174 (2%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGE-- 58
+EID HIG +SG++ADAR LV+HARVE QNHRF+Y EPM+VES A CDL+++FGE
Sbjct: 68 LEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCALATCDLSVQFGESG 127
Query: 59 GDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNK 118
G ++ MSRPFGVSLLIAG DENGP L+ TDPSGT+ + +A+AIG G+E A + E+Y++
Sbjct: 128 GRKKLMSRPFGVSLLIAGVDENGPQLWQTDPSGTYTRYDAQAIGGGAEAAQTVFSERYHR 187
Query: 119 DLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT---YHLYTPSEVEAVINR 169
++T++EAE + + IL+QVMEEK+T +V+IA V + +Y +++ +I+R
Sbjct: 188 NMTVEEAENLTVQILRQVMEEKLTKTSVEIAIVPVSTGRLQIYDQEQIQRIIDR 241
>sp|P32379|PSA5_YEAST Proteasome subunit alpha type-5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PUP2 PE=1 SV=2
Length = 260
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 123/176 (69%), Gaps = 6/176 (3%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGE-- 58
+EID HIGCAMSGL ADAR+++EHAR H Y E + VES TQ++CDLALRFGE
Sbjct: 68 VEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGA 127
Query: 59 -GDEESMSRPFGVSLLIAGSD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQY 116
G+E MSRPFGV+LLIAG D ++G L++ +PSGTF++ NAKAIGSGSEGA + L ++
Sbjct: 128 SGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEW 187
Query: 117 NKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT--YHLYTPSEVEAVINRL 170
+ LTL+EAE + L ILKQVMEEK+ NN ++ + + +Y + +I L
Sbjct: 188 HSSLTLKEAELLVLKILKQVMEEKLDENNAQLSCITKQDGFKIYDNEKTAELIKEL 243
>sp|Q95083|PSA5_DROME Proteasome subunit alpha type-5 OS=Drosophila melanogaster
GN=Prosalpha5 PE=2 SV=2
Length = 244
Score = 179 bits (455), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 125/176 (71%), Gaps = 6/176 (3%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGE-G 59
+E+D+HIGCA SGL+ADARTL+E ARVE QNH F Y E M++ES QA+ LA++FG+ G
Sbjct: 68 VEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSG 127
Query: 60 DEE---SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQY 116
D + +MSRPFGV++L AG + P L++ DPSGTF + AKAIGSGSEGA +LQ+ +
Sbjct: 128 DSDGAAAMSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLF 187
Query: 117 NKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVINRL 170
DLTL EA I+L+ LKQVMEEK+ NV++ + ++++T EVE I +
Sbjct: 188 RPDLTLDEAIDISLNTLKQVMEEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKNI 243
>sp|Q95008|PSA5_CAEEL Proteasome subunit alpha type-5 OS=Caenorhabditis elegans GN=pas-5
PE=1 SV=1
Length = 248
Score = 176 bits (447), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 115/154 (74%), Gaps = 1/154 (0%)
Query: 2 EIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD- 60
++D+HIG +GLIAD+RTLVE A++E QN F+Y + VE TQ++ +LAL+FG+ D
Sbjct: 69 KVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDV 128
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
+ SMSRPFGV++L AG D+ G L++ DPSGTF C AK+IG+ S+GA+ +L+EQY+ L
Sbjct: 129 KASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDAL 188
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPT 154
T++E +AL+ILKQVMEEK+ NV++ + PT
Sbjct: 189 TIKEGLKMALAILKQVMEEKLNSANVEVVVIKPT 222
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 96/150 (64%), Gaps = 3/150 (2%)
Query: 2 EIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDE 61
+ID HIG A +GL+ADAR LVE AR+E Q +R++YGEP+ V+ +A+CDL + +
Sbjct: 71 QIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVY---TQ 127
Query: 62 ESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLT 121
RPFG +LLIAG D G L+ TDPSG + A AIG G + A +E+Y +D+T
Sbjct: 128 HGGVRPFGTALLIAGVDTKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYREDMT 187
Query: 122 LQEAETIALSILKQVMEEKVTPNNVDIARV 151
LQEA +A+ L + E+ T +N++IA V
Sbjct: 188 LQEAIELAVRALYEASREETTADNLEIAVV 217
>sp|A5UJS2|PSA_METS3 Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1
Length = 250
Score = 129 bits (324), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+IDEHIG A SGL+ADAR LVE ARVE Q ++ +Y EP+ V+S ++ LCD+ +
Sbjct: 69 FKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMY---T 125
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
+ RPFG +L+I G + L+ TDPSG + A AIGSG A ++QY D+
Sbjct: 126 QNGGVRPFGSALIIGGVYDGICKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKDDM 185
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAV 166
L EA +AL+ + + E + T NNV+IA + +YT E V
Sbjct: 186 NLNEAINLALTAINEATEHETTANNVEIAVIKCGEEVYTKLSQEEV 231
>sp|A6URN9|PSA_METVS Proteasome subunit alpha OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1
Length = 259
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 105/173 (60%), Gaps = 7/173 (4%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+ID+HI A SGL+ADAR L++ ARVE Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAY---T 126
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
+RPFG++LLI G D + L+ TDPSG + A AIGSG A L+E+Y++++
Sbjct: 127 HHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENM 186
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVINRL 170
++ E +A+ L + EE + P N+D+A V T L T E+E ++ ++
Sbjct: 187 SVSEGMELAIYALSKTTEE-LKPENIDMAIVKDTGKLVEKITVFEIEKIVKKV 238
>sp|A4FZT6|PSA_METM5 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=psmA PE=3 SV=1
Length = 259
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 103/171 (60%), Gaps = 7/171 (4%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY---T 126
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
+ +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y++D+
Sbjct: 127 QHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDM 186
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVIN 168
T+ E +AL L + EE + P N+D+A V + L + E+E ++
Sbjct: 187 TVNEGMELALYALSKTTEE-LKPENIDMAIVKDSGKLVEKISVDEIEKIVK 236
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 98/171 (57%), Gaps = 7/171 (4%)
Query: 2 EIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDE 61
+IDEHI A SGL+ADAR L++ AR+E Q +R +Y EP+TV+ + +CD ++ +
Sbjct: 69 KIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQY---TQ 125
Query: 62 ESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLT 121
RPFGVSLLIAG DE P LY TDPSG + A AIG G +++Y DL+
Sbjct: 126 YGGVRPFGVSLLIAGVDEV-PKLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDDLS 184
Query: 122 LQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINR 169
+A + L + +E ++ P N+++ V T+ +P E++ + R
Sbjct: 185 FDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVER 235
>sp|O26782|PSA_METTH Proteasome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=psmA PE=3 SV=1
Length = 248
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 91/149 (61%), Gaps = 3/149 (2%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+IDEHIG A SGL+ADAR ++E AR+E Q +R +Y EP+ VES + +CD+ +
Sbjct: 69 FQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMY---T 125
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
+ RPFG +L+I G + G L+ TDPSG + A AIG+G A +++Y+ D+
Sbjct: 126 QHGGVRPFGTALIIGGVNGRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDDM 185
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIA 149
L +A +AL + + E K TP +V+IA
Sbjct: 186 NLNQAIELALDAVYEATEGKTTPESVEIA 214
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 7/171 (4%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY---T 126
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
+ +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y++++
Sbjct: 127 QHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENM 186
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVIN 168
T+ E +AL L + EE + P N+D+A V + L + E+E ++
Sbjct: 187 TVNEGMELALYALSKTTEE-LKPENIDMAIVKDSGKLVEKISVDEIEKIVK 236
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 105/169 (62%), Gaps = 14/169 (8%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA---LRFG 57
+ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL ++G
Sbjct: 70 FQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYG 129
Query: 58 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 117
RPFG +LL+AG +E P L+ TDPSG +++ A AIGSG A + +E+Y
Sbjct: 130 G------VRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYR 182
Query: 118 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEV 163
++TL+EA +A+ L ++MEE +P ++++A ++ + TP EV
Sbjct: 183 DEMTLEEAIKLAVLALSKIMEEP-SPESIEVAVISVKEKKFKKITPEEV 230
>sp|Q6M0L9|PSA_METMP Proteasome subunit alpha OS=Methanococcus maripaludis (strain S2 /
LL) GN=psmA PE=3 SV=1
Length = 259
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 103/171 (60%), Gaps = 7/171 (4%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAY---T 126
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
+ +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y++++
Sbjct: 127 QHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENM 186
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVIN 168
T+ E +AL L + EE + P N+D+A + + L + E+E ++
Sbjct: 187 TVSEGMELALYALSKTTEE-LKPENIDMAIIKDSGKLVEKISVDEIEKIVK 236
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 92/148 (62%), Gaps = 4/148 (2%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+ID+H+ A SGL+ADAR L++ AR+E Q +R +YGE +++E + +CD+ + +
Sbjct: 69 FQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQ-- 126
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
RPFGVSLLIAG D+N L+ TDPSG + A AIGSG L+++Y D+
Sbjct: 127 -HGGVRPFGVSLLIAGIDKNEARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDI 185
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDI 148
TL E +A++ L + E+ + P NVD+
Sbjct: 186 TLDEGLELAITALTKANED-IKPENVDV 212
>sp|A9A846|PSA_METM6 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=psmA PE=3 SV=1
Length = 259
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 102/171 (59%), Gaps = 7/171 (4%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY---T 126
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
+ +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y++++
Sbjct: 127 QHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENM 186
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVIN 168
+ E +AL L + EE + P N+D+A V + L + E+E ++
Sbjct: 187 IVSEGMELALYALSKTTEE-LKPENIDMAIVKDSGKLVEKISVDEIEKIVK 236
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 101/174 (58%), Gaps = 14/174 (8%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA---LRFG 57
+ID+HI A SG+IADAR LV AR+E Q HR +YGEP + + +CDL ++G
Sbjct: 70 FQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYG 129
Query: 58 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 117
RPFG +LL+AG +E P LY TDPSG ++ A AIGSG A + +E+Y
Sbjct: 130 G------VRPFGAALLMAGVNEK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYK 182
Query: 118 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVIN 168
D++L+EA +A+ L + M EK + N+++A + + + E+E +N
Sbjct: 183 DDMSLEEAIKLAIFALAKTM-EKPSAENIEVAIITVKDKKFRKLSREEIEKYLN 235
>sp|Q8TPX5|PSA_METAC Proteasome subunit alpha OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=psmA PE=3 SV=1
Length = 247
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 6/173 (3%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+IDEHIG A SGL+ADAR+LV+ ARVE Q +R SY EP+ VE ++ +CD +
Sbjct: 67 FQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTY---T 123
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
+ RP+G +LLIAG D+N P L+ TDPSG + A AIG+G + Y +D+
Sbjct: 124 QYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDM 183
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINRL 170
+ A + + L + E K +++ V+ + P EVE + ++
Sbjct: 184 NMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVQQI 236
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 93/154 (60%), Gaps = 11/154 (7%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA---LRFG 57
+ID+HI A SG+IADAR LV AR+E Q HR +YGEP + + +CDL ++G
Sbjct: 70 FQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYG 129
Query: 58 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 117
RPFG +LL+AG ++ P LY TDPSG ++ A AIGSG A + +++Y
Sbjct: 130 G------VRPFGAALLMAGVNDK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYR 182
Query: 118 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 151
D+TL EA +A+ L + M EK + N+++A +
Sbjct: 183 DDMTLDEAIKLAIFALAKTM-EKPSAENIEVAVI 215
>sp|Q469M6|PSA_METBF Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=psmA PE=3 SV=1
Length = 249
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 97/173 (56%), Gaps = 6/173 (3%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+ID+HIG A SGL+ADAR+LV+ ARVE Q +R SY EP+ VE ++ +CD +
Sbjct: 69 FQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTY---T 125
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
+ RP+G +LLIAG D+N P L+ TDPSG + A AIG+G + +Y +D+
Sbjct: 126 QYGGVRPYGTALLIAGVDDNLPRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQDM 185
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINRL 170
+ A + + L + E K + +++ V+ + P EVE + ++
Sbjct: 186 NMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENYVQQI 238
>sp|Q9U793|PSA2_TRYBB Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2
SV=1
Length = 231
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
Query: 3 IDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE 62
+D+H+GC SG+ D R LV+ AR Q +R +Y EPM + +Q + ++ F E +
Sbjct: 66 LDDHVGCTYSGIGPDCRVLVDAARRACQRYRLTYHEPMPI---SQLVRQISFLFQEFTQS 122
Query: 63 SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTL 122
RPFG SLL+AG+D G LY DPSGTFW A +IG GS A + L+++Y ++ +
Sbjct: 123 GGVRPFGCSLLVAGADSRGNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEI 182
Query: 123 QEAETIALSILKQVMEEKVTPNNVDIARV 151
++A AL LK+ + ++T N + RV
Sbjct: 183 EDAVHTALLTLKEGFDGRMTAENTQVGRV 211
>sp|P52427|PSA4_SPIOL Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2
SV=1
Length = 250
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 105/180 (58%), Gaps = 21/180 (11%)
Query: 2 EIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA---LRFGE 58
+ID+H+ CA++G+++DA L+ ARV+ Q + FSY EPM VE Q+LCD +FG
Sbjct: 67 KIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQFGG 126
Query: 59 GDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 117
RPFGVS L AG D+N G LY +DPSG + A AIG+ ++ A S L++ Y
Sbjct: 127 ------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYK 180
Query: 118 KDLTLQEAETIALSILKQVMEE-KVTPNNVDIARV--APT----YHLYTPSEVEAVINRL 170
D+T ++A +AL L + M+ +T +++A V P+ Y +++P +NRL
Sbjct: 181 DDVTREDAVKLALKALSKTMDSTSLTSEKLELAEVYLLPSGKVKYQVHSPES----LNRL 236
>sp|O81148|PSA4_ARATH Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1
PE=1 SV=1
Length = 250
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 2 EIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA---LRFGE 58
+ID+H+ CA++G+++DA L+ ARV+ Q + F Y EPM VE Q+LCD +FG
Sbjct: 67 KIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGG 126
Query: 59 GDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 117
RPFGVS L AG D+ +G LY +DPSG + A A+G+ ++ A S L++ Y
Sbjct: 127 ------LRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYK 180
Query: 118 KDLTLQEAETIALSILKQVMEE-KVTPNNVDIARVAPT------YHLYTPSEVEAVINR 169
D T +EA +AL +L + M+ +T +++A V T YH+++P + ++ +
Sbjct: 181 DDATREEAVELALKVLTKTMDSTSLTSEKLELAEVYLTPSKTVKYHVHSPESLTKLLVK 239
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 93/154 (60%), Gaps = 11/154 (7%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA---LRFG 57
+ID+HI A SG+IADAR LV AR+E Q +R +YGEP V + +CDL ++G
Sbjct: 70 FQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYG 129
Query: 58 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 117
RPFG +LL+AG ++ P LY TDPSG ++ A AIGSG A + +E+Y
Sbjct: 130 G------VRPFGAALLMAGINDR-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYR 182
Query: 118 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 151
D+ L++A +AL L + ME + +N+++A +
Sbjct: 183 DDMNLEDAIKLALMALAKTMENP-SADNIEVAVI 215
>sp|C3NEC6|PSA_SULIY Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14
/ Yellowstone #1) GN=psmA PE=3 SV=1
Length = 241
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 5/148 (3%)
Query: 3 IDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE 62
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + +
Sbjct: 72 IDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQH 128
Query: 63 SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTL 122
RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DLT+
Sbjct: 129 GGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTI 188
Query: 123 QEAETIALSILKQVME--EKVTPNNVDI 148
++ +AL L ++ EK+TPN V+I
Sbjct: 189 EDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C3NHC6|PSA_SULIN Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51
/ Yellowstone #2) GN=psmA PE=3 SV=1
Length = 241
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 5/148 (3%)
Query: 3 IDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE 62
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + +
Sbjct: 72 IDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQH 128
Query: 63 SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTL 122
RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DLT+
Sbjct: 129 GGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTI 188
Query: 123 QEAETIALSILKQVME--EKVTPNNVDI 148
++ +AL L ++ EK+TPN V+I
Sbjct: 189 EDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C3MVG1|PSA_SULIM Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=psmA PE=3 SV=1
Length = 241
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 5/148 (3%)
Query: 3 IDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE 62
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + +
Sbjct: 72 IDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQH 128
Query: 63 SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTL 122
RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DLT+
Sbjct: 129 GGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTI 188
Query: 123 QEAETIALSILKQVME--EKVTPNNVDI 148
++ +AL L ++ EK+TPN V+I
Sbjct: 189 EDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C3MQ43|PSA_SULIL Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmA PE=3 SV=1
Length = 241
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 5/148 (3%)
Query: 3 IDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE 62
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + +
Sbjct: 72 IDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQH 128
Query: 63 SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTL 122
RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DLT+
Sbjct: 129 GGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTI 188
Query: 123 QEAETIALSILKQVME--EKVTPNNVDI 148
++ +AL L ++ EK+TPN V+I
Sbjct: 189 EDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C4KHD9|PSA_SULIK Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmA PE=3 SV=1
Length = 241
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 5/148 (3%)
Query: 3 IDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE 62
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + +
Sbjct: 72 IDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQH 128
Query: 63 SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTL 122
RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DLT+
Sbjct: 129 GGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTI 188
Query: 123 QEAETIALSILKQVME--EKVTPNNVDI 148
++ +AL L ++ EK+TPN V+I
Sbjct: 189 EDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C3N5R0|PSA_SULIA Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27)
GN=psmA PE=3 SV=1
Length = 241
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 5/148 (3%)
Query: 3 IDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE 62
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + +
Sbjct: 72 IDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQH 128
Query: 63 SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTL 122
RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DLT+
Sbjct: 129 GGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTI 188
Query: 123 QEAETIALSILKQVME--EKVTPNNVDI 148
++ +AL L ++ EK+TPN V+I
Sbjct: 189 EDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C5A2C2|PSA_THEGJ Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1
Length = 260
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 96/154 (62%), Gaps = 11/154 (7%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA---LRFG 57
+ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL ++G
Sbjct: 70 FQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYG 129
Query: 58 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 117
RPFG +LL+AG +E P LY TDPSG +++ A AIGSG A + +E Y+
Sbjct: 130 G------VRPFGAALLMAGVNEK-PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYS 182
Query: 118 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 151
D+ ++ A +A+ L + +EE +P ++++A +
Sbjct: 183 DDIDMEGAIKLAILALAKTLEEP-SPESIEVAYI 215
>sp|O82530|PSA4_PETHY Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2
SV=1
Length = 249
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 93/152 (61%), Gaps = 5/152 (3%)
Query: 2 EIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDE 61
+ID+H+ CA++G+++DA L+ ARV+ Q + FSY EPM VE Q+LCD + +
Sbjct: 67 KIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGY---TQ 123
Query: 62 ESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
PFGVS L AG D+N G L+ +DPSG + A AIG+ ++ A S L++ Y D+
Sbjct: 124 YGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKDDI 183
Query: 121 TLQEAETIALSILKQVMEE-KVTPNNVDIARV 151
T +EA +AL +L + M+ +T +++A V
Sbjct: 184 TREEAVQLALKVLSKTMDSTSLTSEKLELAEV 215
>sp|Q8PTU1|PSA_METMA Proteasome subunit alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmA PE=3 SV=1
Length = 249
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 6/173 (3%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 60
+ID+HIG A SGL+ADAR+LV+ ARVE Q +R SY E + VE ++ +CD +
Sbjct: 69 FQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTY---T 125
Query: 61 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
+ RP+G +LLIAG D+N P L+ TDPSG + A AIG+G + Y +D+
Sbjct: 126 QYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDM 185
Query: 121 TLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINRL 170
+ A + + L + E K +++ V+ + P EVE ++++
Sbjct: 186 NIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQI 238
>sp|B6YSH9|PSA_THEON Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1)
GN=psmA PE=3 SV=1
Length = 260
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 96/154 (62%), Gaps = 11/154 (7%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA---LRFG 57
+ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL ++G
Sbjct: 70 FQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYG 129
Query: 58 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 117
RPFG +LL+AG ++ P LY TDPSG +++ A AIGSG A + ++ Y+
Sbjct: 130 G------VRPFGAALLMAGVNDK-PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYS 182
Query: 118 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 151
DL ++ A +A+ L + +EE +P ++++A +
Sbjct: 183 DDLDMEGAIKLAILALAKTLEEP-SPESIEVAYI 215
>sp|Q9UXC6|PSA_SULSO Proteasome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=psmA PE=3 SV=1
Length = 241
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 91/148 (61%), Gaps = 5/148 (3%)
Query: 3 IDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE 62
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + +
Sbjct: 72 IDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQH 128
Query: 63 SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTL 122
RPFGV+L+IAG D++ P L+ T+PSG + A AIG G A L++ Y +DL +
Sbjct: 129 GGVRPFGVALVIAGIDKSVPKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNV 188
Query: 123 QEAETIALSILKQVME--EKVTPNNVDI 148
+E +AL L ++ EK+TPN V+I
Sbjct: 189 EETILLALKALSATLKPNEKLTPNTVEI 216
>sp|Q9V2V6|PSA1_HALVD Proteasome subunit alpha 1 OS=Haloferax volcanii (strain ATCC 29605
/ DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM
B-1768 / DS2) GN=psmA1 PE=1 SV=2
Length = 252
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 89/149 (59%), Gaps = 3/149 (2%)
Query: 4 DEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEES 63
D+HIG A +G +ADAR L++ AR ++Q +R YGEP+ +E+ T+ + D ++ +
Sbjct: 73 DDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPIGIETLTKEVTDHIQQY---TQVG 129
Query: 64 MSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQ 123
+RPFGV+LLI G + P LY TDPSGT ++ A +IG+ L+E + DLTL
Sbjct: 130 GARPFGVALLIGGVENGTPRLYETDPSGTPYEWKAVSIGADRGDHQEHLEENFRDDLTLD 189
Query: 124 EAETIALSILKQVMEEKVTPNNVDIARVA 152
E +AL + +E P+ VD+A V+
Sbjct: 190 EGIELALEAIASTSDEGTAPDGVDVATVS 218
>sp|Q9YC01|PSA_AERPE Proteasome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=psmA PE=3
SV=1
Length = 258
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 13/175 (7%)
Query: 2 EIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDE 61
+ID+HIG A +G+ D R L+++ARV T HR YGEP VE + + D+ + +
Sbjct: 73 KIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAY---TQ 129
Query: 62 ESMSRPFGVSLLIAGSDENGPS-LYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 120
RPFGV+L+ AG + +G + +Y TDP G ++ A AIGSG + A+ ++ Y D+
Sbjct: 130 HGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSDM 189
Query: 121 TLQEAETIALSILKQVMEEKV---------TPNNVDIARVAPTYHLYTPSEVEAV 166
+L+EA +AL IL ++ + V P+ V++A + ++T E V
Sbjct: 190 SLEEATKLALKILYAIIRKTVEDKEKAIATLPDQVELAYITVKERMFTKMTKEQV 244
>sp|A4YCU9|PSA_METS5 Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=psmA PE=3 SV=1
Length = 240
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 89/149 (59%), Gaps = 5/149 (3%)
Query: 3 IDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE 62
+D+H+GC+ +GL +D R L+++AR + HR Y EP++++ T+ + D+ + +
Sbjct: 72 LDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMY---TQH 128
Query: 63 SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTL 122
RPFGV+L++ G D L+ T+PSG F A AIG G A L++ Y +DL++
Sbjct: 129 GGVRPFGVALIVGGVDRGVTKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKEDLSV 188
Query: 123 QEAETIALSILKQVME--EKVTPNNVDIA 149
+E +AL+ LK ++ EK+ P NV+I
Sbjct: 189 EETILLALNALKVTLKPGEKLGPGNVEIG 217
>sp|Q5V1D4|PSA2_HALMA Proteasome subunit alpha 2 OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=psmA2 PE=3
SV=1
Length = 244
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 91/150 (60%), Gaps = 3/150 (2%)
Query: 2 EIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDE 61
EID H+G A +G +ADAR L++ AR ++Q +R Y EP +VES T+ + D ++ +
Sbjct: 70 EIDSHVGVASAGHVADARQLIDVARRQSQVNRLRYDEPASVESLTKEITDYIQQY---TQ 126
Query: 62 ESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLT 121
+RPFGV+LL+AG ++ P L+ TDPSGT ++ A AIG E + L+E+Y + +
Sbjct: 127 TGGARPFGVALLVAGIEDGEPRLFETDPSGTPYEWQAVAIGGSREDIQTFLEEEYAEGMD 186
Query: 122 LQEAETIALSILKQVMEEKVTPNNVDIARV 151
L+ +AL L V E+ + VDIA +
Sbjct: 187 LEGGIELALRALASVNEDGLDATGVDIATI 216
>sp|B8GEZ3|PSA_METPE Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1
Length = 241
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 95/176 (53%), Gaps = 12/176 (6%)
Query: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCD---LALRFG 57
+ID HIG A SGL+ DAR+LV+ ARVE+Q +R SY E + VE ++ LCD +FG
Sbjct: 69 FKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQFG 128
Query: 58 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 117
+RP+G +LLIAG + L+ TDPSGT + A IG G +E+YN
Sbjct: 129 G------ARPYGTALLIAGISDGQFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEYN 182
Query: 118 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARV---APTYHLYTPSEVEAVINRL 170
+ ++++A + L L E K N V+I V P + + EV + + ++
Sbjct: 183 PEASIRDAILLGLKALHAATEGKFDVNTVEIGVVNNDTPAFRKMSRQEVASFVEQI 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,595,347
Number of Sequences: 539616
Number of extensions: 2424447
Number of successful extensions: 5569
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 4888
Number of HSP's gapped (non-prelim): 436
length of query: 170
length of database: 191,569,459
effective HSP length: 109
effective length of query: 61
effective length of database: 132,751,315
effective search space: 8097830215
effective search space used: 8097830215
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)