Query 030845
Match_columns 170
No_of_seqs 119 out of 1490
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 08:15:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030845.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030845hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p5q_A Glutathione peroxidase 100.0 1E-36 3.4E-41 210.5 18.0 169 1-169 1-169 (170)
2 2v1m_A Glutathione peroxidase; 100.0 3.1E-36 1.1E-40 207.8 19.1 165 5-169 4-168 (169)
3 2i3y_A Epididymal secretory gl 100.0 3.6E-36 1.2E-40 215.4 19.8 162 6-169 29-212 (215)
4 2f8a_A Glutathione peroxidase 100.0 4.3E-36 1.5E-40 214.4 18.6 163 7-169 21-208 (208)
5 3dwv_A Glutathione peroxidase- 100.0 1.2E-36 4E-41 214.0 13.6 162 5-168 19-183 (187)
6 2gs3_A PHGPX, GPX-4, phospholi 100.0 5.9E-36 2E-40 210.0 16.5 161 6-167 23-185 (185)
7 3kij_A Probable glutathione pe 100.0 1E-35 3.4E-40 207.9 17.5 160 5-169 11-171 (180)
8 2r37_A Glutathione peroxidase 100.0 1.4E-35 4.9E-40 211.4 18.6 161 7-169 12-194 (207)
9 2obi_A PHGPX, GPX-4, phospholi 100.0 1.1E-35 3.8E-40 208.2 16.2 161 6-167 21-183 (183)
10 2p31_A CL683, glutathione pero 100.0 7.4E-35 2.5E-39 203.8 15.8 152 5-168 22-181 (181)
11 2vup_A Glutathione peroxidase- 100.0 3.3E-34 1.1E-38 201.9 17.1 165 5-169 21-186 (190)
12 3cmi_A Peroxiredoxin HYR1; thi 100.0 1.2E-34 4E-39 200.9 14.4 163 1-169 1-169 (171)
13 3eyt_A Uncharacterized protein 100.0 2.6E-32 8.9E-37 186.3 14.9 150 7-169 1-153 (158)
14 3lor_A Thiol-disulfide isomera 100.0 2.5E-32 8.4E-37 186.7 14.7 151 7-169 4-156 (160)
15 4hde_A SCO1/SENC family lipopr 100.0 5.3E-32 1.8E-36 187.6 16.1 159 3-168 3-170 (170)
16 3fw2_A Thiol-disulfide oxidore 100.0 2.9E-31 1E-35 179.9 15.5 142 4-169 3-149 (150)
17 4g2e_A Peroxiredoxin; redox pr 100.0 5.4E-32 1.8E-36 185.3 8.8 146 5-166 3-156 (157)
18 4fo5_A Thioredoxin-like protei 100.0 2E-31 6.7E-36 179.4 10.9 137 3-164 4-141 (143)
19 1xzo_A BSSCO, hypothetical pro 100.0 4.4E-31 1.5E-35 182.9 12.5 158 4-169 5-173 (174)
20 3lwa_A Secreted thiol-disulfid 100.0 7.4E-31 2.5E-35 183.4 13.0 144 6-169 31-182 (183)
21 3u5r_E Uncharacterized protein 100.0 1.9E-30 6.4E-35 186.4 14.9 147 5-168 31-187 (218)
22 3ewl_A Uncharacterized conserv 100.0 5.3E-31 1.8E-35 176.8 10.9 137 7-168 2-141 (142)
23 3fkf_A Thiol-disulfide oxidore 100.0 4.6E-30 1.6E-34 172.9 14.9 142 4-169 3-147 (148)
24 4gqc_A Thiol peroxidase, perox 100.0 1E-31 3.6E-36 185.1 6.8 149 6-169 5-161 (164)
25 2lrn_A Thiol:disulfide interch 100.0 3.4E-30 1.2E-34 175.0 13.9 140 6-169 3-142 (152)
26 3eur_A Uncharacterized protein 100.0 3.6E-30 1.2E-34 172.9 13.5 136 4-164 3-141 (142)
27 3drn_A Peroxiredoxin, bacterio 100.0 4E-30 1.4E-34 176.4 13.9 127 6-157 2-134 (161)
28 3or5_A Thiol:disulfide interch 100.0 6.3E-30 2.1E-34 175.4 14.8 147 4-169 6-152 (165)
29 3raz_A Thioredoxin-related pro 100.0 2.5E-30 8.6E-35 175.4 12.1 137 12-168 3-140 (151)
30 2f9s_A Thiol-disulfide oxidore 100.0 5.3E-30 1.8E-34 173.7 13.5 138 8-169 2-139 (151)
31 2ggt_A SCO1 protein homolog, m 100.0 3.3E-30 1.1E-34 176.7 12.1 151 11-169 2-162 (164)
32 3hcz_A Possible thiol-disulfid 100.0 7.2E-30 2.5E-34 172.0 13.5 144 3-168 2-146 (148)
33 2cvb_A Probable thiol-disulfid 100.0 6.1E-30 2.1E-34 179.5 12.3 148 4-169 5-160 (188)
34 3gkn_A Bacterioferritin comigr 100.0 4.2E-30 1.4E-34 176.4 11.1 148 5-167 6-161 (163)
35 2rli_A SCO2 protein homolog, m 100.0 7.9E-30 2.7E-34 176.1 12.3 149 13-169 7-165 (171)
36 2ywi_A Hypothetical conserved 100.0 8.7E-30 3E-34 179.6 12.3 148 5-169 17-175 (196)
37 2lrt_A Uncharacterized protein 100.0 1.9E-29 6.6E-34 171.5 13.2 139 4-168 7-145 (152)
38 3me7_A Putative uncharacterize 100.0 3.7E-29 1.3E-33 173.2 14.5 155 7-168 2-162 (170)
39 2l5o_A Putative thioredoxin; s 100.0 3.3E-29 1.1E-33 169.9 13.9 140 7-169 3-142 (153)
40 2yzh_A Probable thiol peroxida 100.0 5.3E-29 1.8E-33 172.4 13.5 145 5-167 20-171 (171)
41 1xvw_A Hypothetical protein RV 100.0 4.1E-29 1.4E-33 170.9 12.5 129 6-157 9-145 (160)
42 3ixr_A Bacterioferritin comigr 100.0 1.2E-29 4.1E-34 177.0 10.0 148 5-167 20-177 (179)
43 3gl3_A Putative thiol:disulfid 100.0 4E-28 1.4E-32 164.4 17.2 138 6-168 3-142 (152)
44 1jfu_A Thiol:disulfide interch 100.0 3.6E-29 1.2E-33 175.2 12.1 145 6-169 34-181 (186)
45 1we0_A Alkyl hydroperoxide red 100.0 2E-28 6.8E-33 171.8 15.4 137 7-168 2-157 (187)
46 2c0d_A Thioredoxin peroxidase 100.0 7.1E-29 2.4E-33 178.4 12.9 137 6-167 25-183 (221)
47 3kcm_A Thioredoxin family prot 100.0 2E-28 6.9E-33 166.2 14.4 139 7-168 3-143 (154)
48 2lja_A Putative thiol-disulfid 100.0 8E-28 2.7E-32 162.9 17.1 141 5-168 2-143 (152)
49 1uul_A Tryparedoxin peroxidase 100.0 1.2E-28 4.1E-33 175.0 13.5 142 1-167 1-164 (202)
50 2k6v_A Putative cytochrome C o 100.0 2.6E-30 9E-35 178.5 4.6 150 8-167 12-172 (172)
51 1n8j_A AHPC, alkyl hydroperoxi 100.0 6E-29 2.1E-33 174.5 11.2 136 7-167 2-155 (186)
52 2bmx_A Alkyl hydroperoxidase C 100.0 2.5E-28 8.7E-33 172.4 14.1 139 5-168 3-170 (195)
53 3kh7_A Thiol:disulfide interch 100.0 1.8E-28 6.1E-33 170.6 13.0 137 5-169 29-168 (176)
54 2b7k_A SCO1 protein; metalloch 100.0 1E-28 3.4E-33 175.2 11.8 155 7-169 14-180 (200)
55 1psq_A Probable thiol peroxida 100.0 2.2E-28 7.7E-33 168.1 13.1 141 5-165 15-162 (163)
56 3erw_A Sporulation thiol-disul 100.0 5.2E-28 1.8E-32 162.2 14.6 137 5-163 8-144 (145)
57 2b5x_A YKUV protein, TRXY; thi 100.0 4.4E-28 1.5E-32 163.0 14.0 143 7-169 2-146 (148)
58 2hyx_A Protein DIPZ; thioredox 100.0 2E-28 7E-33 186.6 12.7 146 5-169 50-200 (352)
59 3p7x_A Probable thiol peroxida 100.0 3E-28 1E-32 167.9 12.2 122 4-152 18-147 (166)
60 3ia1_A THIO-disulfide isomeras 100.0 1.9E-28 6.5E-33 166.4 10.9 142 4-168 3-144 (154)
61 2pn8_A Peroxiredoxin-4; thiore 100.0 8E-29 2.7E-33 177.1 9.4 138 5-167 18-176 (211)
62 1zzo_A RV1677; thioredoxin fol 100.0 1.7E-27 5.8E-32 157.9 15.1 135 8-169 1-136 (136)
63 3ztl_A Thioredoxin peroxidase; 100.0 2.2E-28 7.6E-33 176.1 11.6 127 5-156 39-182 (222)
64 1zof_A Alkyl hydroperoxide-red 100.0 1.2E-28 4E-33 174.5 9.7 136 7-167 2-160 (198)
65 2i81_A 2-Cys peroxiredoxin; st 100.0 5.1E-28 1.7E-32 173.2 13.1 137 6-167 21-179 (213)
66 3ha9_A Uncharacterized thiored 100.0 4E-28 1.4E-32 166.8 11.8 140 7-168 12-164 (165)
67 2a4v_A Peroxiredoxin DOT5; yea 100.0 3.1E-28 1.1E-32 166.6 10.9 138 4-168 5-154 (159)
68 1q98_A Thiol peroxidase, TPX; 100.0 4.1E-28 1.4E-32 167.1 11.6 131 5-152 16-148 (165)
69 1zye_A Thioredoxin-dependent p 100.0 4.5E-28 1.5E-32 174.3 11.5 139 4-167 25-184 (220)
70 1lu4_A Soluble secreted antige 100.0 3.3E-27 1.1E-31 156.7 14.7 132 10-168 2-136 (136)
71 3qpm_A Peroxiredoxin; oxidored 100.0 6.6E-28 2.3E-32 175.4 12.0 137 5-166 47-204 (240)
72 3zrd_A Thiol peroxidase; oxido 100.0 7.5E-28 2.6E-32 170.7 11.8 144 5-165 51-198 (200)
73 2jsy_A Probable thiol peroxida 100.0 3.2E-28 1.1E-32 167.7 9.0 139 4-168 16-167 (167)
74 2h01_A 2-Cys peroxiredoxin; th 100.0 2.8E-27 9.7E-32 166.6 13.9 135 8-167 2-158 (192)
75 1xvq_A Thiol peroxidase; thior 99.9 1.5E-27 5.3E-32 165.7 11.9 145 5-168 17-165 (175)
76 1qmv_A Human thioredoxin perox 99.9 7.7E-28 2.6E-32 170.2 10.4 138 5-167 4-162 (197)
77 4evm_A Thioredoxin family prot 99.9 1.8E-26 6E-31 153.0 15.8 136 11-166 1-137 (138)
78 3tjj_A Peroxiredoxin-4; thiore 99.9 1.8E-27 6.2E-32 174.3 11.1 143 5-166 61-218 (254)
79 1tp9_A Peroxiredoxin, PRX D (t 99.9 1.9E-28 6.5E-33 168.4 5.5 133 5-153 3-146 (162)
80 2h30_A Thioredoxin, peptide me 99.9 2.9E-27 9.9E-32 162.0 11.3 136 15-169 21-157 (164)
81 3hdc_A Thioredoxin family prot 99.9 8.5E-27 2.9E-31 159.2 12.8 133 5-164 14-148 (158)
82 3mng_A Peroxiredoxin-5, mitoch 99.9 5.2E-28 1.8E-32 167.8 6.7 147 4-164 13-171 (173)
83 2ls5_A Uncharacterized protein 99.9 2.5E-29 8.4E-34 171.8 0.0 140 5-167 6-147 (159)
84 2b1k_A Thiol:disulfide interch 99.9 1.1E-26 3.7E-31 160.0 12.4 137 6-169 22-161 (168)
85 1kng_A Thiol:disulfide interch 99.9 1.2E-26 4E-31 157.7 11.4 138 5-169 7-153 (156)
86 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 9.9E-28 3.4E-32 165.6 6.0 131 6-153 3-142 (167)
87 3uma_A Hypothetical peroxiredo 99.9 6.2E-28 2.1E-32 168.9 5.0 134 5-153 25-167 (184)
88 1prx_A HORF6; peroxiredoxin, h 99.9 4.6E-27 1.6E-31 169.3 9.6 149 5-167 4-168 (224)
89 2v2g_A Peroxiredoxin 6; oxidor 99.9 3.6E-27 1.2E-31 170.6 8.5 149 6-167 3-164 (233)
90 3keb_A Probable thiol peroxida 99.9 1.5E-25 5.2E-30 160.3 14.8 145 4-168 20-176 (224)
91 1xcc_A 1-Cys peroxiredoxin; un 99.9 8.3E-27 2.8E-31 167.6 7.9 149 6-167 3-165 (220)
92 3tue_A Tryparedoxin peroxidase 99.9 2.6E-26 8.9E-31 163.5 9.4 147 2-166 22-183 (219)
93 3sbc_A Peroxiredoxin TSA1; alp 99.9 4.9E-26 1.7E-30 161.8 8.3 142 6-166 23-179 (216)
94 3a2v_A Probable peroxiredoxin; 99.9 1.1E-25 3.6E-30 164.0 9.8 145 5-167 4-161 (249)
95 1nm3_A Protein HI0572; hybrid, 99.9 6.1E-26 2.1E-30 165.1 8.1 133 6-154 3-144 (241)
96 2pwj_A Mitochondrial peroxired 99.9 2.2E-26 7.5E-31 159.4 4.6 133 7-154 8-155 (171)
97 4eo3_A Bacterioferritin comigr 99.9 2.8E-25 9.6E-30 167.7 10.0 133 10-167 2-138 (322)
98 2lus_A Thioredoxion; CR-Trp16, 99.9 1.2E-26 4.1E-31 155.5 0.0 121 10-151 2-126 (143)
99 1i5g_A Tryparedoxin II; electr 99.9 6E-25 2E-29 147.6 8.3 120 8-150 3-126 (144)
100 3s9f_A Tryparedoxin; thioredox 99.9 6.2E-25 2.1E-29 151.2 5.9 120 7-150 23-146 (165)
101 1o8x_A Tryparedoxin, TRYX, TXN 99.9 2.4E-24 8.1E-29 145.1 8.0 119 8-150 4-126 (146)
102 1o73_A Tryparedoxin; electron 99.9 3.4E-24 1.2E-28 143.8 6.9 120 7-150 3-126 (144)
103 2xhf_A Peroxiredoxin 5; oxidor 99.9 3.5E-22 1.2E-26 137.6 9.2 135 3-153 11-152 (171)
104 4f82_A Thioredoxin reductase; 99.9 1.5E-22 5.3E-27 139.7 6.1 133 6-153 10-158 (176)
105 1xiy_A Peroxiredoxin, pfaop; a 99.8 6.2E-22 2.1E-26 137.9 4.8 131 7-152 2-153 (182)
106 2l57_A Uncharacterized protein 99.8 1.9E-19 6.5E-24 118.1 8.2 114 10-168 4-117 (126)
107 2fwh_A Thiol:disulfide interch 99.8 3E-20 1E-24 123.4 4.1 117 6-166 4-126 (134)
108 3hxs_A Thioredoxin, TRXP; elec 99.8 1.3E-18 4.3E-23 116.2 10.9 105 17-169 36-140 (141)
109 2ju5_A Thioredoxin disulfide i 99.8 2.5E-19 8.5E-24 121.8 6.8 120 12-169 28-153 (154)
110 3ul3_B Thioredoxin, thioredoxi 99.7 9.7E-18 3.3E-22 110.3 9.1 106 10-165 22-127 (128)
111 3p2a_A Thioredoxin 2, putative 99.7 5.8E-17 2E-21 109.1 9.6 114 8-169 31-144 (148)
112 3f9u_A Putative exported cytoc 99.7 1.8E-18 6.3E-23 119.3 1.0 121 28-169 43-167 (172)
113 3fk8_A Disulphide isomerase; A 99.7 9.4E-17 3.2E-21 106.1 6.8 94 30-167 27-132 (133)
114 3zzx_A Thioredoxin; oxidoreduc 99.7 2.8E-16 9.7E-21 100.0 8.6 87 29-165 17-103 (105)
115 3qfa_C Thioredoxin; protein-pr 99.7 1.4E-16 4.8E-21 103.1 7.3 88 30-167 29-116 (116)
116 2vlu_A Thioredoxin, thioredoxi 99.7 8.2E-17 2.8E-21 104.7 5.3 119 1-169 1-121 (122)
117 2o8v_B Thioredoxin 1; disulfid 99.7 3.2E-16 1.1E-20 103.1 7.8 90 31-168 39-128 (128)
118 3tco_A Thioredoxin (TRXA-1); d 99.7 3.5E-16 1.2E-20 99.4 7.6 90 31-168 20-109 (109)
119 2voc_A Thioredoxin; electron t 99.7 3.3E-16 1.1E-20 100.5 7.4 90 31-168 16-105 (112)
120 2l5l_A Thioredoxin; structural 99.6 1.1E-15 3.6E-20 101.5 9.8 91 31-169 37-127 (136)
121 2dml_A Protein disulfide-isome 99.6 3E-15 1E-19 98.3 11.9 91 31-168 34-124 (130)
122 3cxg_A Putative thioredoxin; m 99.6 1.2E-16 4.2E-21 105.8 5.2 104 16-169 24-130 (133)
123 1dby_A Chloroplast thioredoxin 99.6 1.6E-15 5.5E-20 96.2 10.1 90 31-168 18-107 (107)
124 2trx_A Thioredoxin; electron t 99.6 1.1E-15 3.7E-20 97.1 9.3 90 31-168 19-108 (108)
125 1nsw_A Thioredoxin, TRX; therm 99.6 2.2E-16 7.5E-21 99.9 5.9 89 31-167 16-104 (105)
126 1z6n_A Hypothetical protein PA 99.6 7.1E-16 2.4E-20 106.0 8.7 93 26-165 48-140 (167)
127 2pu9_C TRX-F, thioredoxin F-ty 99.6 1.3E-15 4.4E-20 97.4 9.4 90 29-167 21-110 (111)
128 2kuc_A Putative disulphide-iso 99.6 3.3E-16 1.1E-20 103.0 6.6 100 24-168 19-121 (130)
129 3gix_A Thioredoxin-like protei 99.6 4.6E-16 1.6E-20 105.0 7.4 90 31-168 22-121 (149)
130 1thx_A Thioredoxin, thioredoxi 99.6 2.6E-15 8.8E-20 96.3 10.5 90 31-168 24-113 (115)
131 3die_A Thioredoxin, TRX; elect 99.6 1E-15 3.4E-20 96.9 8.5 89 31-167 18-106 (106)
132 3d6i_A Monothiol glutaredoxin- 99.6 1.6E-15 5.6E-20 97.0 9.5 91 31-169 20-110 (112)
133 1t00_A Thioredoxin, TRX; redox 99.6 1.2E-15 4.2E-20 97.6 8.8 90 31-168 22-111 (112)
134 2ppt_A Thioredoxin-2; thiredox 99.6 5.3E-16 1.8E-20 105.4 7.3 91 31-169 63-153 (155)
135 3f3q_A Thioredoxin-1; His TAG, 99.6 1.2E-15 3.9E-20 97.6 8.3 87 31-167 23-109 (109)
136 2dj1_A Protein disulfide-isome 99.6 1.3E-15 4.5E-20 101.3 8.8 104 17-168 19-124 (140)
137 4euy_A Uncharacterized protein 99.6 8.9E-16 3E-20 97.3 7.6 88 31-167 17-104 (105)
138 1w4v_A Thioredoxin, mitochondr 99.6 2E-15 6.9E-20 97.9 9.2 89 31-167 30-118 (119)
139 2e0q_A Thioredoxin; electron t 99.6 1.1E-15 3.9E-20 96.0 7.8 90 31-169 15-104 (104)
140 1xfl_A Thioredoxin H1; AT3G510 99.6 2.6E-15 8.8E-20 98.2 9.4 89 30-168 36-124 (124)
141 3d22_A TRXH4, thioredoxin H-ty 99.6 2.1E-16 7.2E-21 105.2 4.1 92 28-169 42-133 (139)
142 1ep7_A Thioredoxin CH1, H-type 99.6 3.4E-15 1.2E-19 95.4 9.6 88 32-168 24-111 (112)
143 3hz4_A Thioredoxin; NYSGXRC, P 99.6 1.1E-15 3.6E-20 102.1 6.9 90 31-168 23-112 (140)
144 2lst_A Thioredoxin; structural 99.4 4.3E-17 1.5E-21 107.2 0.0 103 22-169 9-117 (130)
145 1fb6_A Thioredoxin M; electron 99.6 3.3E-15 1.1E-19 94.3 8.4 102 18-167 3-105 (105)
146 2j23_A Thioredoxin; immune pro 99.6 2.9E-15 1E-19 97.4 8.3 90 31-168 32-121 (121)
147 1x5d_A Protein disulfide-isome 99.6 4.9E-15 1.7E-19 97.5 9.5 91 31-168 24-117 (133)
148 2i4a_A Thioredoxin; acidophIle 99.6 5.1E-15 1.7E-19 93.7 9.1 89 31-167 19-107 (107)
149 3m9j_A Thioredoxin; oxidoreduc 99.6 2.4E-15 8.2E-20 95.0 7.5 88 30-167 18-105 (105)
150 2djj_A PDI, protein disulfide- 99.6 2.4E-15 8.1E-20 97.5 7.6 104 16-168 8-117 (121)
151 2dj3_A Protein disulfide-isome 99.6 9.7E-15 3.3E-19 96.2 10.5 107 16-168 8-118 (133)
152 3gnj_A Thioredoxin domain prot 99.6 5.7E-15 2E-19 94.2 9.0 90 31-168 21-110 (111)
153 2yzu_A Thioredoxin; redox prot 99.6 2.5E-15 8.7E-20 95.3 7.1 90 31-168 17-106 (109)
154 3apq_A DNAJ homolog subfamily 99.6 7.8E-16 2.7E-20 109.4 5.2 104 17-168 99-202 (210)
155 1faa_A Thioredoxin F; electron 99.6 5.3E-15 1.8E-19 96.4 8.7 89 30-167 35-123 (124)
156 1sen_A Thioredoxin-like protei 99.6 9.4E-18 3.2E-22 115.1 -4.7 112 12-168 27-148 (164)
157 1x5e_A Thioredoxin domain cont 99.6 7E-15 2.4E-19 96.1 8.9 89 31-168 22-110 (126)
158 1ti3_A Thioredoxin H, PTTRXH1; 99.6 1.7E-14 5.8E-19 92.2 10.3 89 30-168 24-112 (113)
159 1r26_A Thioredoxin; redox-acti 99.6 8.8E-15 3E-19 95.9 8.8 89 31-169 36-124 (125)
160 2xc2_A Thioredoxinn; oxidoredu 99.6 5.2E-15 1.8E-19 95.5 7.2 89 28-167 29-117 (117)
161 3emx_A Thioredoxin; structural 99.6 3.5E-15 1.2E-19 98.9 6.1 91 34-168 33-126 (135)
162 3qou_A Protein YBBN; thioredox 99.6 1.2E-14 4E-19 107.8 9.6 90 30-167 24-113 (287)
163 1gh2_A Thioredoxin-like protei 99.6 1.7E-14 5.8E-19 91.6 8.9 87 31-167 20-106 (107)
164 2oe3_A Thioredoxin-3; electron 99.6 1.2E-14 4.2E-19 93.6 8.3 85 31-165 29-113 (114)
165 2vim_A Thioredoxin, TRX; thior 99.6 1.3E-14 4.6E-19 91.3 8.3 88 30-167 17-104 (104)
166 2wz9_A Glutaredoxin-3; protein 99.6 1.3E-14 4.5E-19 98.2 8.7 88 31-168 31-118 (153)
167 2l6c_A Thioredoxin; oxidoreduc 99.6 1.6E-14 5.4E-19 92.4 8.6 88 31-167 18-105 (110)
168 1syr_A Thioredoxin; SGPP, stru 99.6 1.7E-14 5.6E-19 92.5 8.5 88 31-168 25-112 (112)
169 1xwb_A Thioredoxin; dimerizati 99.6 2.8E-14 9.7E-19 90.1 9.4 89 30-167 18-106 (106)
170 1zma_A Bacterocin transport ac 99.6 9.8E-15 3.3E-19 94.4 7.4 90 31-164 28-117 (118)
171 1v98_A Thioredoxin; oxidoreduc 99.6 3.3E-14 1.1E-18 94.6 10.1 104 18-169 36-139 (140)
172 2av4_A Thioredoxin-like protei 99.6 7.9E-15 2.7E-19 98.6 6.9 90 31-168 40-139 (160)
173 2i1u_A Thioredoxin, TRX, MPT46 99.5 1.1E-14 3.7E-19 94.3 7.0 91 31-169 29-119 (121)
174 2qsi_A Putative hydrogenase ex 99.5 4.8E-14 1.7E-18 93.1 10.1 88 33-168 34-123 (137)
175 2vm1_A Thioredoxin, thioredoxi 99.5 2.9E-14 9.9E-19 91.8 8.6 89 31-169 27-115 (118)
176 3uvt_A Thioredoxin domain-cont 99.5 5.8E-14 2E-18 89.4 9.4 89 31-166 20-110 (111)
177 3h79_A Thioredoxin-like protei 99.5 3.3E-14 1.1E-18 93.1 8.4 104 17-166 17-126 (127)
178 1qgv_A Spliceosomal protein U5 99.5 5.4E-14 1.8E-18 94.1 9.6 90 31-168 22-121 (142)
179 2qgv_A Hydrogenase-1 operon pr 99.5 6.7E-14 2.3E-18 92.8 9.7 91 31-168 33-125 (140)
180 2f51_A Thioredoxin; electron t 99.5 6.9E-15 2.4E-19 95.3 4.7 101 17-166 5-111 (118)
181 3aps_A DNAJ homolog subfamily 99.5 1.3E-14 4.3E-19 94.2 5.6 91 31-169 20-114 (122)
182 2dj0_A Thioredoxin-related tra 99.5 1.1E-14 3.9E-19 96.6 5.2 93 29-162 23-115 (137)
183 3dxb_A Thioredoxin N-terminall 99.5 2.1E-14 7.3E-19 102.9 6.7 90 31-168 29-118 (222)
184 1mek_A Protein disulfide isome 99.5 1.6E-14 5.5E-19 93.1 5.2 91 31-168 23-117 (120)
185 1oaz_A Thioredoxin 1; immune s 99.5 1.3E-14 4.5E-19 94.7 4.6 89 31-167 20-122 (123)
186 1wmj_A Thioredoxin H-type; str 99.5 4.3E-15 1.5E-19 97.4 0.8 90 30-169 34-123 (130)
187 3idv_A Protein disulfide-isome 99.5 1.1E-13 3.8E-18 99.7 8.2 104 17-168 17-122 (241)
188 2yj7_A LPBCA thioredoxin; oxid 99.2 3.4E-15 1.2E-19 94.2 0.0 103 17-167 3-106 (106)
189 1fo5_A Thioredoxin; disulfide 99.5 1.9E-13 6.4E-18 82.9 7.1 83 33-167 3-85 (85)
190 3ph9_A Anterior gradient prote 99.5 1.3E-14 4.6E-19 97.9 1.9 93 30-169 42-146 (151)
191 1nho_A Probable thioredoxin; b 99.5 1.6E-13 5.5E-18 83.2 6.4 83 34-168 3-85 (85)
192 2dbc_A PDCL2, unnamed protein 99.5 2.1E-13 7.3E-18 90.3 7.4 84 31-166 29-119 (135)
193 2es7_A Q8ZP25_salty, putative 99.4 5.7E-13 1.9E-17 89.1 8.9 88 32-168 34-125 (142)
194 1a8l_A Protein disulfide oxido 99.4 1.1E-12 3.8E-17 93.8 10.0 91 31-168 133-226 (226)
195 3t58_A Sulfhydryl oxidase 1; o 99.4 4.6E-13 1.6E-17 106.8 8.0 109 17-169 14-128 (519)
196 3q6o_A Sulfhydryl oxidase 1; p 99.4 8.3E-13 2.8E-17 95.8 8.7 92 31-168 29-127 (244)
197 3ira_A Conserved protein; meth 99.4 3.6E-12 1.2E-16 87.8 9.1 105 24-167 31-143 (173)
198 2hls_A Protein disulfide oxido 99.3 1.1E-11 3.9E-16 89.9 11.4 89 29-168 135-226 (243)
199 3dml_A Putative uncharacterize 99.3 6.6E-13 2.3E-17 85.4 4.0 94 31-169 17-111 (116)
200 3iv4_A Putative oxidoreductase 99.3 2.7E-12 9.3E-17 81.6 6.5 86 32-163 24-111 (112)
201 3ed3_A Protein disulfide-isome 99.3 4E-12 1.4E-16 94.9 8.2 92 31-167 34-141 (298)
202 3f8u_A Protein disulfide-isome 99.3 4.1E-12 1.4E-16 100.5 8.4 105 17-168 354-461 (481)
203 3evi_A Phosducin-like protein 99.3 5E-12 1.7E-16 81.8 7.1 71 32-154 23-93 (118)
204 1a0r_P Phosducin, MEKA, PP33; 99.3 6E-12 2E-16 91.3 7.7 73 31-153 132-204 (245)
205 1wou_A Thioredoxin -related pr 99.3 8.1E-12 2.8E-16 81.3 7.1 45 29-74 21-72 (123)
206 2r2j_A Thioredoxin domain-cont 99.3 7.6E-12 2.6E-16 96.4 8.1 104 18-168 8-117 (382)
207 2trc_P Phosducin, MEKA, PP33; 99.3 7.8E-12 2.7E-16 89.3 7.1 85 31-165 119-210 (217)
208 3idv_A Protein disulfide-isome 99.3 1.5E-11 5.3E-16 88.4 8.6 90 31-168 146-237 (241)
209 1sji_A Calsequestrin 2, calseq 99.3 3E-11 1E-15 92.0 10.3 88 31-167 27-121 (350)
210 3kp8_A Vkorc1/thioredoxin doma 99.3 8.3E-14 2.8E-18 88.6 -3.5 40 23-62 3-42 (106)
211 1ilo_A Conserved hypothetical 99.2 8.6E-11 3E-15 69.7 9.4 36 35-71 2-37 (77)
212 2b5e_A Protein disulfide-isome 99.2 3.4E-11 1.2E-15 95.8 9.5 91 31-168 30-122 (504)
213 2dlx_A UBX domain-containing p 99.2 9.2E-11 3.1E-15 79.2 9.8 92 31-168 41-136 (153)
214 3f8u_A Protein disulfide-isome 99.2 4.5E-11 1.5E-15 94.5 9.4 90 31-168 20-109 (481)
215 2ywm_A Glutaredoxin-like prote 99.2 6E-11 2E-15 85.0 8.9 86 31-168 135-220 (229)
216 3uem_A Protein disulfide-isome 99.2 3.2E-11 1.1E-15 92.0 7.3 88 31-166 266-355 (361)
217 3apo_A DNAJ homolog subfamily 99.2 7.3E-11 2.5E-15 98.4 9.3 93 27-168 450-542 (780)
218 3gyk_A 27KDA outer membrane pr 99.2 7.5E-11 2.6E-15 81.1 7.4 137 22-169 12-174 (175)
219 3qcp_A QSOX from trypanosoma b 99.2 9E-11 3.1E-15 92.1 8.6 44 31-74 41-91 (470)
220 2b5e_A Protein disulfide-isome 99.1 7.3E-11 2.5E-15 93.9 7.4 103 17-168 360-467 (504)
221 3apo_A DNAJ homolog subfamily 99.1 4.3E-11 1.5E-15 99.8 5.2 91 31-169 674-768 (780)
222 3hd5_A Thiol:disulfide interch 99.1 9.6E-10 3.3E-14 76.9 9.5 43 31-74 24-66 (195)
223 3us3_A Calsequestrin-1; calciu 99.0 3.8E-09 1.3E-13 80.9 12.0 90 31-168 29-124 (367)
224 3h93_A Thiol:disulfide interch 99.0 6.7E-10 2.3E-14 77.5 6.5 43 31-74 24-66 (192)
225 1eej_A Thiol:disulfide interch 99.0 7.7E-10 2.6E-14 78.8 6.4 45 25-73 79-123 (216)
226 3ga4_A Dolichyl-diphosphooligo 99.0 3E-09 1E-13 73.3 8.7 44 31-74 36-90 (178)
227 2e7p_A Glutaredoxin; thioredox 99.0 2.4E-10 8.2E-15 73.3 3.0 86 31-166 18-106 (116)
228 2djk_A PDI, protein disulfide- 98.9 2.1E-09 7.3E-14 70.7 6.6 89 31-168 22-115 (133)
229 2znm_A Thiol:disulfide interch 98.9 4.3E-09 1.5E-13 73.5 7.3 43 31-74 21-63 (195)
230 1ttz_A Conserved hypothetical 98.9 5E-09 1.7E-13 63.9 6.1 75 36-168 3-77 (87)
231 1a8l_A Protein disulfide oxido 98.8 2.8E-08 9.5E-13 70.7 9.9 92 29-167 19-112 (226)
232 2ywm_A Glutaredoxin-like prote 98.7 9.2E-08 3.2E-12 68.2 9.2 90 31-167 20-114 (229)
233 1v58_A Thiol:disulfide interch 98.7 5.2E-08 1.8E-12 70.5 7.9 136 25-168 90-233 (241)
234 2rem_A Disulfide oxidoreductas 98.7 5.9E-08 2E-12 67.5 7.4 42 31-73 24-65 (193)
235 1hyu_A AHPF, alkyl hydroperoxi 98.6 2.6E-07 8.8E-12 73.9 11.0 83 31-166 116-198 (521)
236 3hz8_A Thiol:disulfide interch 98.6 1E-07 3.5E-12 66.5 6.8 43 31-74 23-65 (193)
237 1t3b_A Thiol:disulfide interch 98.6 2E-07 6.9E-12 66.0 8.2 39 31-73 85-123 (211)
238 1wjk_A C330018D20RIK protein; 98.6 5.2E-08 1.8E-12 60.9 4.2 48 22-74 4-52 (100)
239 2fgx_A Putative thioredoxin; N 98.5 5.1E-07 1.7E-11 57.0 7.9 38 34-74 30-67 (107)
240 4h86_A Peroxiredoxin type-2; o 98.5 9.2E-07 3.1E-11 61.5 9.6 111 24-151 59-179 (199)
241 2qc7_A ERP31, ERP28, endoplasm 98.5 3.7E-07 1.3E-11 65.9 7.5 90 31-166 21-117 (240)
242 2k8s_A Thioredoxin; dimer, str 98.5 1.9E-07 6.4E-12 55.7 5.0 36 36-74 4-39 (80)
243 1ego_A Glutaredoxin; electron 98.5 2.1E-07 7.2E-12 55.9 5.0 37 36-74 3-39 (85)
244 1z6m_A Conserved hypothetical 98.4 3.6E-06 1.2E-10 57.4 11.2 49 25-74 20-70 (175)
245 2c0g_A ERP29 homolog, windbeut 98.4 1.5E-06 5E-11 63.1 9.4 90 31-167 32-131 (248)
246 3l9v_A Putative thiol-disulfid 98.3 1.2E-06 4E-11 60.9 5.1 43 31-74 13-58 (189)
247 3uem_A Protein disulfide-isome 98.2 7.1E-06 2.4E-10 62.3 9.3 91 33-168 136-230 (361)
248 3kp9_A Vkorc1/thioredoxin doma 98.2 3.2E-07 1.1E-11 67.9 1.7 37 25-61 190-226 (291)
249 1h75_A Glutaredoxin-like prote 98.2 1.7E-06 5.8E-11 51.4 4.2 32 36-74 3-34 (81)
250 2hls_A Protein disulfide oxido 98.2 7.7E-06 2.6E-10 59.0 8.3 43 32-74 25-73 (243)
251 4dvc_A Thiol:disulfide interch 98.2 2.9E-06 1E-10 58.1 5.7 42 31-73 20-61 (184)
252 3feu_A Putative lipoprotein; a 98.2 9.2E-07 3.1E-11 61.3 3.1 40 32-74 22-61 (185)
253 3c7m_A Thiol:disulfide interch 98.1 8.6E-06 2.9E-10 56.3 6.3 44 31-75 16-60 (195)
254 1r7h_A NRDH-redoxin; thioredox 98.0 1.4E-05 4.8E-10 46.4 5.9 32 36-74 3-34 (75)
255 3gv1_A Disulfide interchange p 98.0 8.9E-06 3E-10 54.3 5.6 33 25-57 7-39 (147)
256 1un2_A DSBA, thiol-disulfide i 98.0 1.2E-06 4.2E-11 61.3 0.5 53 21-74 100-157 (197)
257 2lqo_A Putative glutaredoxin R 98.0 0.00012 4.2E-09 44.7 9.5 32 36-74 6-37 (92)
258 1kte_A Thioltransferase; redox 97.9 1.4E-05 4.6E-10 49.8 4.8 35 36-72 14-48 (105)
259 2ec4_A FAS-associated factor 1 97.9 0.00027 9.3E-09 48.5 11.2 105 29-168 52-168 (178)
260 3l9s_A Thiol:disulfide interch 97.8 1.8E-05 6E-10 55.1 4.3 43 31-74 20-65 (191)
261 2hze_A Glutaredoxin-1; thiored 97.8 7.1E-06 2.4E-10 52.2 1.6 22 35-56 20-41 (114)
262 2cq9_A GLRX2 protein, glutared 97.8 2.7E-05 9.3E-10 50.7 4.3 20 38-57 31-50 (130)
263 2ht9_A Glutaredoxin-2; thiored 97.6 6.5E-05 2.2E-09 49.9 4.6 21 37-57 52-72 (146)
264 3f4s_A Alpha-DSBA1, putative u 97.5 0.00023 8E-09 50.7 6.6 48 26-73 33-82 (226)
265 3nzn_A Glutaredoxin; structura 97.4 0.00024 8.4E-09 44.1 5.1 23 35-57 23-45 (103)
266 3c1r_A Glutaredoxin-1; oxidize 97.4 0.00036 1.2E-08 44.5 5.8 35 36-74 27-62 (118)
267 3ic4_A Glutaredoxin (GRX-1); s 97.3 0.0012 3.9E-08 39.8 7.1 22 36-57 14-35 (92)
268 3rhb_A ATGRXC5, glutaredoxin-C 97.3 0.00052 1.8E-08 43.2 5.1 22 36-57 21-42 (113)
269 3msz_A Glutaredoxin 1; alpha-b 97.2 0.0013 4.5E-08 39.1 6.2 21 36-56 6-26 (89)
270 4f9z_D Endoplasmic reticulum r 97.1 0.0074 2.5E-07 42.7 10.7 94 33-169 132-226 (227)
271 3h8q_A Thioredoxin reductase 3 96.9 0.0025 8.4E-08 40.2 6.1 21 37-57 20-40 (114)
272 1fov_A Glutaredoxin 3, GRX3; a 96.8 0.0026 8.8E-08 37.2 5.2 22 36-57 3-24 (82)
273 3qmx_A Glutaredoxin A, glutare 96.8 0.0031 1.1E-07 38.8 5.5 25 33-57 15-39 (99)
274 3kzq_A Putative uncharacterize 96.7 0.013 4.5E-07 40.8 9.1 40 129-169 165-204 (208)
275 2yan_A Glutaredoxin-3; oxidore 96.6 0.0051 1.8E-07 38.0 5.6 33 34-74 18-55 (105)
276 2khp_A Glutaredoxin; thioredox 96.6 0.004 1.4E-07 37.3 4.9 32 36-74 8-39 (92)
277 1wik_A Thioredoxin-like protei 96.2 0.022 7.4E-07 35.4 6.9 26 42-74 28-53 (109)
278 2klx_A Glutaredoxin; thioredox 96.2 0.0043 1.5E-07 37.0 3.3 22 36-57 8-29 (89)
279 3ctg_A Glutaredoxin-2; reduced 96.1 0.0091 3.1E-07 38.5 4.8 20 36-55 39-59 (129)
280 3gha_A Disulfide bond formatio 95.5 0.026 9E-07 39.2 5.5 54 20-74 18-73 (202)
281 3tdg_A DSBG, putative uncharac 95.3 0.0097 3.3E-07 43.4 2.7 40 31-73 146-185 (273)
282 3l4n_A Monothiol glutaredoxin- 94.9 0.029 9.8E-07 36.1 3.8 48 36-92 16-63 (127)
283 2ct6_A SH3 domain-binding glut 94.7 0.15 5E-06 31.7 6.7 36 36-74 10-47 (111)
284 3gn3_A Putative protein-disulf 94.6 0.027 9.2E-07 38.5 3.3 43 31-73 13-55 (182)
285 3bci_A Disulfide bond protein 94.5 0.043 1.5E-06 37.2 4.3 44 30-73 9-54 (186)
286 1aba_A Glutaredoxin; electron 94.3 0.18 6E-06 29.7 6.1 21 36-56 2-26 (87)
287 2axo_A Hypothetical protein AT 94.2 0.72 2.5E-05 33.5 10.3 38 34-74 44-81 (270)
288 1t1v_A SH3BGRL3, SH3 domain-bi 94.2 0.26 9E-06 29.3 6.8 12 36-47 4-15 (93)
289 1sji_A Calsequestrin 2, calseq 94.1 0.47 1.6E-05 35.5 9.6 96 33-169 246-347 (350)
290 3gmf_A Protein-disulfide isome 94.0 0.17 5.7E-06 35.2 6.4 48 26-73 9-58 (205)
291 3us3_A Calsequestrin-1; calciu 93.9 0.29 9.9E-06 37.0 8.1 96 33-169 248-349 (367)
292 2l4c_A Endoplasmic reticulum r 93.9 0.74 2.5E-05 29.2 9.4 36 31-71 38-73 (124)
293 2wci_A Glutaredoxin-4; redox-a 93.6 0.079 2.7E-06 34.4 3.9 34 34-74 36-73 (135)
294 3zyw_A Glutaredoxin-3; metal b 92.2 0.28 9.5E-06 30.5 4.8 24 32-56 15-43 (111)
295 3gx8_A Monothiol glutaredoxin- 92.2 0.74 2.5E-05 29.0 6.9 25 33-57 16-44 (121)
296 1z3e_A Regulatory protein SPX; 91.6 0.47 1.6E-05 30.4 5.5 52 36-99 3-54 (132)
297 3ipz_A Monothiol glutaredoxin- 89.9 0.48 1.6E-05 29.2 4.3 16 42-57 31-46 (109)
298 2wem_A Glutaredoxin-related pr 89.9 0.86 2.9E-05 28.6 5.5 15 43-57 34-48 (118)
299 3l78_A Regulatory protein SPX; 89.9 0.76 2.6E-05 28.9 5.2 52 36-99 2-53 (120)
300 1pn0_A Phenol 2-monooxygenase; 89.6 7.6 0.00026 31.8 12.2 145 6-167 479-645 (665)
301 1rw1_A Conserved hypothetical 88.9 0.3 1E-05 30.5 2.8 48 37-96 3-50 (114)
302 1u6t_A SH3 domain-binding glut 88.8 2.2 7.7E-05 27.0 6.8 36 36-74 2-39 (121)
303 3fz4_A Putative arsenate reduc 88.7 1.4 4.7E-05 27.8 5.8 53 36-100 5-57 (120)
304 3q6o_A Sulfhydryl oxidase 1; p 87.4 3.6 0.00012 28.8 8.0 38 129-166 201-238 (244)
305 3gkx_A Putative ARSC family re 86.6 1 3.5E-05 28.4 4.3 52 37-100 7-58 (120)
306 2in3_A Hypothetical protein; D 86.2 0.81 2.8E-05 31.5 4.0 40 129-169 172-211 (216)
307 2kok_A Arsenate reductase; bru 86.2 0.45 1.6E-05 29.9 2.4 49 36-96 7-55 (120)
308 2g2q_A Glutaredoxin-2; thiored 86.0 1 3.5E-05 28.3 3.8 38 33-75 2-39 (124)
309 2dkh_A 3-hydroxybenzoate hydro 84.7 15 0.0005 29.9 11.2 148 6-167 467-637 (639)
310 1s3c_A Arsenate reductase; ARS 84.1 1.3 4.5E-05 28.7 4.0 49 38-98 6-54 (141)
311 3rdw_A Putative arsenate reduc 82.5 1.9 6.7E-05 27.1 4.2 50 36-97 7-56 (121)
312 2h8l_A Protein disulfide-isome 81.0 12 0.00041 26.3 9.9 34 134-168 195-230 (252)
313 4f9z_D Endoplasmic reticulum r 79.9 12 0.00043 25.7 8.2 36 31-71 26-61 (227)
314 3gha_A Disulfide bond formatio 77.2 2.8 9.7E-05 28.7 4.0 35 129-169 159-193 (202)
315 2in3_A Hypothetical protein; D 77.1 2.3 8E-05 29.1 3.6 38 34-72 8-45 (216)
316 2jad_A Yellow fluorescent prot 76.1 1.8 6.1E-05 32.9 2.8 16 37-52 264-279 (362)
317 1nm3_A Protein HI0572; hybrid, 76.1 1.2 4.1E-05 31.3 1.9 24 34-57 170-193 (241)
318 3gmf_A Protein-disulfide isome 76.0 3.1 0.00011 28.7 3.9 35 129-169 164-198 (205)
319 2a4h_A Selenoprotein SEP15; re 76.0 3.7 0.00013 26.0 3.8 34 135-168 63-97 (126)
320 2jvx_A NF-kappa-B essential mo 75.3 0.27 9.2E-06 22.6 -1.2 21 43-63 5-25 (28)
321 3ec3_A Protein disulfide-isome 74.8 14 0.00047 26.0 7.2 34 135-169 195-229 (250)
322 3bci_A Disulfide bond protein 73.2 2.9 0.0001 27.9 3.2 34 129-168 145-178 (186)
323 3f0i_A Arsenate reductase; str 72.5 2.2 7.6E-05 26.7 2.2 50 37-98 7-56 (119)
324 3bj5_A Protein disulfide-isome 69.3 20 0.00068 23.1 10.5 36 134-169 91-128 (147)
325 2r2j_A Thioredoxin domain-cont 69.1 30 0.001 25.9 8.3 34 134-169 294-330 (382)
326 3mjh_B Early endosome antigen 67.9 0.5 1.7E-05 22.8 -1.2 20 43-62 7-26 (34)
327 3gl5_A Putative DSBA oxidoredu 67.9 12 0.00042 26.2 5.6 41 32-72 1-42 (239)
328 2x8g_A Thioredoxin glutathione 64.5 8.1 0.00028 31.0 4.5 21 36-56 20-40 (598)
329 3gl5_A Putative DSBA oxidoredu 60.4 9.6 0.00033 26.8 3.8 36 129-169 179-214 (239)
330 4ev1_A Anabena TIC22; TIC22 fo 56.0 53 0.0018 23.5 12.7 136 10-168 12-177 (252)
331 2imf_A HCCA isomerase, 2-hydro 54.9 8.1 0.00028 26.1 2.6 35 36-71 3-37 (203)
332 3ghf_A Septum site-determining 54.6 25 0.00086 21.9 4.6 53 30-97 45-97 (120)
333 3ed3_A Protein disulfide-isome 54.4 16 0.00056 26.5 4.3 35 132-166 230-265 (298)
334 3ktb_A Arsenical resistance op 52.7 37 0.0013 20.8 7.3 35 40-74 12-52 (106)
335 3gn3_A Putative protein-disulf 52.6 7.5 0.00025 26.1 2.1 32 129-163 150-181 (182)
336 2v2f_A Penicillin binding prot 52.1 8.5 0.00029 16.8 1.6 15 136-150 6-20 (26)
337 2kii_A Putative uncharacterize 51.4 51 0.0018 22.0 6.5 53 8-72 111-163 (181)
338 3vhs_A ATPase wrnip1; zinc fin 50.0 1.1 3.9E-05 19.8 -1.6 12 41-52 6-17 (29)
339 3kgk_A Arsenical resistance op 49.0 45 0.0015 20.6 6.6 26 49-74 24-49 (110)
340 4gxt_A A conserved functionall 48.9 85 0.0029 23.8 8.1 43 48-99 220-262 (385)
341 1r4w_A Glutathione S-transfera 48.9 12 0.0004 25.9 2.7 35 34-71 6-40 (226)
342 1th5_A NIFU1; iron-sulfur clus 44.9 41 0.0014 19.1 4.1 43 20-63 22-66 (74)
343 3ga8_A HTH-type transcriptiona 43.9 20 0.0007 20.3 2.8 35 29-63 23-64 (78)
344 3tfg_A ALR2278 protein; heme-b 42.7 57 0.0019 22.0 5.3 54 8-72 113-166 (189)
345 2a2p_A Selenoprotein M, SELM p 41.5 28 0.00097 22.1 3.3 31 135-165 57-88 (129)
346 3fhk_A UPF0403 protein YPHP; d 41.0 42 0.0014 21.7 4.0 34 134-168 107-144 (147)
347 2h8l_A Protein disulfide-isome 40.6 89 0.003 21.7 9.7 36 32-71 24-59 (252)
348 2k49_A UPF0339 protein SO_3888 40.1 64 0.0022 20.1 4.8 33 135-167 66-98 (118)
349 1xhj_A Nitrogen fixation prote 38.6 60 0.002 19.1 5.8 34 21-55 26-59 (88)
350 3ec3_A Protein disulfide-isome 38.1 99 0.0034 21.4 10.3 36 32-71 25-60 (250)
351 3v67_A Sensor protein CPXA; PA 36.6 42 0.0014 21.5 3.6 16 135-150 56-71 (138)
352 3bid_A UPF0339 protein NMB1088 35.9 56 0.0019 17.9 4.5 32 136-167 14-45 (64)
353 1uwd_A Hypothetical protein TM 34.6 73 0.0025 18.9 4.4 49 39-92 50-98 (103)
354 3cwf_A Alkaline phosphatase sy 33.8 59 0.002 19.6 4.0 15 136-150 50-64 (122)
355 3t58_A Sulfhydryl oxidase 1; o 32.4 28 0.00097 27.6 2.7 22 129-150 201-222 (519)
356 3gby_A Uncharacterized protein 31.8 44 0.0015 20.2 3.1 28 135-166 100-127 (128)
357 3fmw_A Oxygenase; mithramycin, 31.2 15 0.00052 29.4 1.0 36 6-41 445-482 (570)
358 3fz5_A Possible 2-hydroxychrom 30.7 30 0.001 23.3 2.4 38 37-75 8-45 (202)
359 5nul_A Flavodoxin; electron tr 30.3 45 0.0015 20.6 3.0 13 84-97 96-108 (138)
360 2jwk_A Protein TOLR; periplasm 30.0 69 0.0024 17.3 3.5 33 135-167 4-40 (74)
361 1s3a_A NADH-ubiquinone oxidore 29.3 94 0.0032 18.5 4.3 34 135-168 66-99 (102)
362 2hz5_A Dynein light chain 2A, 27.9 41 0.0014 20.6 2.3 15 136-150 29-43 (106)
363 2ijr_A Hypothetical protein AP 27.4 45 0.0015 24.3 2.8 39 21-59 208-246 (300)
364 4fn4_A Short chain dehydrogena 27.2 78 0.0027 22.4 4.1 23 52-74 42-64 (254)
365 2k8e_A UPF0339 protein YEGP; p 26.7 1.2E+02 0.004 19.3 4.4 33 135-167 82-114 (130)
366 2ef7_A Hypothetical protein ST 26.6 74 0.0025 19.1 3.6 30 135-168 99-128 (133)
367 3hug_B Probable conserved memb 26.3 14 0.00049 22.7 0.0 23 42-64 52-74 (108)
368 1yd6_A UVRC; DNA binding prote 25.8 92 0.0031 18.6 3.6 21 130-150 11-32 (99)
369 3pe6_A Monoglyceride lipase; a 24.6 1.6E+02 0.0056 19.7 6.3 61 9-74 13-78 (303)
370 2q1z_B Anti-sigma factor CHRR, 23.4 26 0.00088 23.8 0.9 21 42-62 33-53 (195)
371 3hju_A Monoglyceride lipase; a 23.4 2E+02 0.0067 20.2 6.5 59 11-74 33-96 (342)
372 3k6e_A CBS domain protein; str 22.7 83 0.0028 20.0 3.3 28 137-168 118-145 (156)
373 3hn9_A Lamin-B1; structural ge 22.3 64 0.0022 20.2 2.6 15 136-150 101-115 (123)
374 2j58_A WZA, outer membrane lip 22.2 61 0.0021 24.4 2.8 32 138-169 98-134 (359)
375 3vk8_A Probable formamidopyrim 21.8 17 0.00058 26.6 -0.3 10 41-50 279-288 (295)
376 3eeq_A Putative cobalamin bios 21.7 1.4E+02 0.0048 22.2 4.7 34 135-168 82-116 (336)
377 3bqa_A Sensor protein PHOQ; hi 20.7 73 0.0025 20.6 2.5 25 136-163 43-67 (148)
378 2gx5_A GTP-sensing transcripti 20.7 1.5E+02 0.005 19.8 4.1 15 136-150 48-62 (170)
379 2wul_A Glutaredoxin related pr 20.6 1.6E+02 0.0055 18.1 6.8 23 33-55 20-46 (118)
380 3cq1_A Putative uncharacterize 20.0 78 0.0027 18.8 2.5 48 39-91 49-96 (103)
No 1
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=100.00 E-value=1e-36 Score=210.50 Aligned_cols=169 Identities=60% Similarity=1.061 Sum_probs=138.4
Q ss_pred CCCCCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCC
Q 030845 1 MGASESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQE 80 (170)
Q Consensus 1 ~~~~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~ 80 (170)
|++....+|..+|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|.+..++
T Consensus 1 ~~~~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~ 80 (170)
T 2p5q_A 1 MATQTSKNPESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEE 80 (170)
T ss_dssp ---------CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCC
T ss_pred CCCCcCCCCccccceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCC
Confidence 67778889999999999999999999999999999999999999999999999999999999889999999999877777
Q ss_pred CCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHH
Q 030845 81 PGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIE 160 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~ 160 (170)
+++.+.+++|++++++++||++.+.|..+.....+|..+.....+.++.++++.|++||||++|+|++++.|..+++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~ 160 (170)
T 2p5q_A 81 PGTNDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLE 160 (170)
T ss_dssp CSCHHHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGH
T ss_pred CCCHHHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHH
Confidence 78899999999437899999996556777777777776653322222235666669999999999999999988899999
Q ss_pred HHHHHHhhc
Q 030845 161 GDIKNALGD 169 (170)
Q Consensus 161 ~~l~~ll~~ 169 (170)
+.|++++++
T Consensus 161 ~~i~~ll~~ 169 (170)
T 2p5q_A 161 RDIKQLLEI 169 (170)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhhc
Confidence 999999864
No 2
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=100.00 E-value=3.1e-36 Score=207.84 Aligned_cols=165 Identities=52% Similarity=0.883 Sum_probs=143.0
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCH
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTS 84 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~ 84 (170)
....|..+|+|++++.+|+++++++++||++||+||++|||+|+.+++.|++++++++++++.+++|++|.+.++++++.
T Consensus 4 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~ 83 (169)
T 2v1m_A 4 SHKSWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAE 83 (169)
T ss_dssp ---CCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred cccCCcccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCH
Confidence 45688999999999999999999999999999999999999999999999999999999899999999997777777889
Q ss_pred HHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHH
Q 030845 85 QEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIK 164 (170)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~ 164 (170)
+.+++|+.++++++||++.+.+..+.....+|.++.....+..+..+.++|++||||++|+|++++.|..+++++.+.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 163 (169)
T 2v1m_A 84 AEIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIM 163 (169)
T ss_dssp HHHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHH
Confidence 99999932588999999976667777777778777655444444458888999999999999999999888999999999
Q ss_pred HHhhc
Q 030845 165 NALGD 169 (170)
Q Consensus 165 ~ll~~ 169 (170)
+++++
T Consensus 164 ~ll~~ 168 (169)
T 2v1m_A 164 ELLEK 168 (169)
T ss_dssp HHHHC
T ss_pred HHhcc
Confidence 99875
No 3
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=215.44 Aligned_cols=162 Identities=35% Similarity=0.596 Sum_probs=142.1
Q ss_pred CCCCCcccceEeecCC-CCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCH
Q 030845 6 SVPQKSIYEFTVKDSK-GKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTS 84 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~~-G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~ 84 (170)
......+|+|+++|.+ |+.++|++++||++||+|||+||++|+ +++.|++++++|+++|++||+|++|.+..+++++.
T Consensus 29 ~~~~~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~ 107 (215)
T 2i3y_A 29 KDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDN 107 (215)
T ss_dssp CCCCCCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred ccccCCcCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCH
Confidence 3456689999999999 999999999999999999999999998 99999999999999999999999998888888889
Q ss_pred HHHHHHHHH------hcCCCCceeEEeecCCCCCchHHHHHhhhcCC---cc------------CcccccCceEEEECCC
Q 030845 85 QEAHEFACT------RYKAEYPIFQKVRVNGPNAEPLYKFLKASKTG---YF------------GSRIKWNFTKFLVDTE 143 (170)
Q Consensus 85 ~~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~---~~------------~~~v~~~p~~~lid~~ 143 (170)
+++++|+ + +++++||++.|.+..+.....+|.++.....+ .+ +..+.|.|++||||++
T Consensus 108 ~~i~~f~-~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~ 186 (215)
T 2i3y_A 108 KEILPGL-KYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPD 186 (215)
T ss_dssp HHHHHHH-HHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTT
T ss_pred HHHHHHH-HhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCC
Confidence 9999999 5 88999999988777888788888877654321 11 1257788999999999
Q ss_pred CcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 144 GNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 144 G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
|+|+.++.|..+++++.+.|++++++
T Consensus 187 G~vv~~~~g~~~~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 187 GIPVMRWSHRATVSSVKTDILAYLKQ 212 (215)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHGGG
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 99999999988899999999999875
No 4
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=100.00 E-value=4.3e-36 Score=214.38 Aligned_cols=163 Identities=36% Similarity=0.630 Sum_probs=141.7
Q ss_pred CCCCcccceEeecCC-CCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHH
Q 030845 7 VPQKSIYEFTVKDSK-GKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQ 85 (170)
Q Consensus 7 ~~~~~~p~f~l~~~~-G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~ 85 (170)
..+..+|+|++++.+ |+.+++++++||++||+||++|||+|+.++|.|++++++|+++|+.||+|++|.++.+++++.+
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~ 100 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNE 100 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHH
T ss_pred hhcCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHH
Confidence 567789999999999 9999999999999999999999999999999999999999998999999999977777788889
Q ss_pred HHHHHHH-----HhcCCCCceeEEeecCCCCCchHHHHHhhhcCCc-------c------------CcccccCceEEEEC
Q 030845 86 EAHEFAC-----TRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGY-------F------------GSRIKWNFTKFLVD 141 (170)
Q Consensus 86 ~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-------~------------~~~v~~~p~~~lid 141 (170)
++++|++ .+++++||++.+.+..+....++|.++.....+. + ..++.++|++||||
T Consensus 101 ~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID 180 (208)
T 2f8a_A 101 EILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVG 180 (208)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEEC
T ss_pred HHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEc
Confidence 9999994 2789999999887888887778888776443211 1 12588889999999
Q ss_pred CCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 142 TEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 142 ~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
++|+|+.++.|..+++++.+.|++++++
T Consensus 181 ~~G~i~~~~~g~~~~~~l~~~I~~ll~~ 208 (208)
T 2f8a_A 181 PDGVPLRRYSRRFQTIDIEPDIEALLSQ 208 (208)
T ss_dssp TTSCEEEEECTTSCGGGGHHHHHHHHC-
T ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHhhC
Confidence 9999999999988999999999999864
No 5
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=100.00 E-value=1.2e-36 Score=213.96 Aligned_cols=162 Identities=47% Similarity=0.787 Sum_probs=143.6
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCH
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTS 84 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~ 84 (170)
...++.++|+|+|+|.+|+.+++++++||++||+||++|||+|+.+++.|++++++|+++++.+|+|++|.++.+++++.
T Consensus 19 ~~~~~~~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~ 98 (187)
T 3dwv_A 19 KMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNE 98 (187)
T ss_dssp -CTTCCSGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBT
T ss_pred hhcCCCccCCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCH
Confidence 35788899999999999999999999999999999999999999999999999999999999999999998777888889
Q ss_pred HHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCc---eEEEECCCCcEEEecCCCCCchhHHH
Q 030845 85 QEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNF---TKFLVDTEGNVIGRYSPTTSPMAIEG 161 (170)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p---~~~lid~~G~i~~~~~g~~~~~~~~~ 161 (170)
+.+++|++++++++||++.+.+..+.....+|..+.....+.+ +++.+| ++||||++|+|++++.|..+++++.+
T Consensus 99 ~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~--~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~ 176 (187)
T 3dwv_A 99 EEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGIL--ATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEE 176 (187)
T ss_dssp THHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSB--SSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHH
T ss_pred HHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCcc--CCCccccceeEEEECCCCCEEEEECCCCCHHHHHH
Confidence 9999999546799999998888888888888988877665553 455556 99999999999999999889999999
Q ss_pred HHHHHhh
Q 030845 162 DIKNALG 168 (170)
Q Consensus 162 ~l~~ll~ 168 (170)
.|+++|+
T Consensus 177 ~i~~lL~ 183 (187)
T 3dwv_A 177 KLIPLLG 183 (187)
T ss_dssp HHHHHC-
T ss_pred HHHHHHh
Confidence 9999886
No 6
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=100.00 E-value=5.9e-36 Score=210.02 Aligned_cols=161 Identities=47% Similarity=0.839 Sum_probs=141.1
Q ss_pred CCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHH
Q 030845 6 SVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQ 85 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~ 85 (170)
...|..+|+|++++.+|+++++++++||++||+||++|||+|+.+++.|++++++++++++.+++|++|.+..+++++.+
T Consensus 23 ~~~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~ 102 (185)
T 2gs3_A 23 MRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNE 102 (185)
T ss_dssp GGGCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHH
T ss_pred ccCCCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHH
Confidence 45788999999999999999999999999999999999999999999999999999998999999999977777778899
Q ss_pred HHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcC--CccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHH
Q 030845 86 EAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKT--GYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDI 163 (170)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (170)
.+++|+ ++++++||++.+.+..+....++|..+..... +..+..+.++|++||||++|+|++++.|..+++++.+.|
T Consensus 103 ~~~~~~-~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 181 (185)
T 2gs3_A 103 EIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 181 (185)
T ss_dssp HHHHHH-HHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGH
T ss_pred HHHHHH-HHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHH
Confidence 999999 68999999997667777777778877664443 333335778899999999999999999988889999988
Q ss_pred HHHh
Q 030845 164 KNAL 167 (170)
Q Consensus 164 ~~ll 167 (170)
+++|
T Consensus 182 ~~lL 185 (185)
T 2gs3_A 182 PHYF 185 (185)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 8775
No 7
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=100.00 E-value=1e-35 Score=207.95 Aligned_cols=160 Identities=41% Similarity=0.738 Sum_probs=137.9
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCH
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTS 84 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~ 84 (170)
...++.++|+|+|+|.+|+.+++++++||++||+||++|||+|+.+++.|++++++|+++++.+++|++|.+..+++++.
T Consensus 11 ~~~~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~ 90 (180)
T 3kij_A 11 LKPKINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPS 90 (180)
T ss_dssp CCCCCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCH
T ss_pred hcCCcCcccceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCH
Confidence 35688999999999999999999999999999999999999999999999999999999999999999998888888899
Q ss_pred HHHHHHHHHh-cCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHH
Q 030845 85 QEAHEFACTR-YKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDI 163 (170)
Q Consensus 85 ~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (170)
+.+++|++ + ++++||++.+.+..+.....+|.++..... ....|.+++||||++|+|++++.|..+++++.+.|
T Consensus 91 ~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~----~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i 165 (180)
T 3kij_A 91 KEVESFAR-KNYGVTFPIFHKIKILGSEGEPAFRFLVDSSK----KEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDI 165 (180)
T ss_dssp HHHHHHHH-HHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHT----CCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHH
T ss_pred HHHHHHHH-HhcCCCCceeeeeeccCccccHHHHHHHhcCC----CCccccceEEEECCCCCEEEEECCCCCHHHHHHHH
Confidence 99999995 6 999999998777777777777776553221 01222233999999999999999988998888888
Q ss_pred HHHhhc
Q 030845 164 KNALGD 169 (170)
Q Consensus 164 ~~ll~~ 169 (170)
+++|++
T Consensus 166 ~~lL~~ 171 (180)
T 3kij_A 166 AALVRQ 171 (180)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888764
No 8
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=211.38 Aligned_cols=161 Identities=36% Similarity=0.575 Sum_probs=138.7
Q ss_pred CCCCcccceEeecCC-CCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHH
Q 030845 7 VPQKSIYEFTVKDSK-GKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQ 85 (170)
Q Consensus 7 ~~~~~~p~f~l~~~~-G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~ 85 (170)
.....+|+|+++|.+ |+.++|++++||++||+||++|||+| .+++.|++++++|+++|++||+|++|.+..+++++.+
T Consensus 12 ~~~~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~ 90 (207)
T 2r37_A 12 GISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 90 (207)
T ss_dssp ---CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH
T ss_pred cccCccCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH
Confidence 445689999999999 99999999999999999999999999 7999999999999999999999999988778888889
Q ss_pred HHHHHHHH------hcCCCCceeEEeecCCCCCchHHHHHhhhcCC---ccC------------cccccCceEEEECCCC
Q 030845 86 EAHEFACT------RYKAEYPIFQKVRVNGPNAEPLYKFLKASKTG---YFG------------SRIKWNFTKFLVDTEG 144 (170)
Q Consensus 86 ~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~---~~~------------~~v~~~p~~~lid~~G 144 (170)
++++|+ + +++++||++.|.+..+.....+|.++.....+ .++ ..+.|.|++||||++|
T Consensus 91 ~i~~f~-~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G 169 (207)
T 2r37_A 91 EILPTL-KYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDG 169 (207)
T ss_dssp HHHHHH-HHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTS
T ss_pred HHHHHH-HhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCC
Confidence 999999 5 88999999988777888778888877644321 111 2467889999999999
Q ss_pred cEEEecCCCCCchhHHHHHHHHhhc
Q 030845 145 NVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 145 ~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
+|+.++.|..+++++.+.|++++++
T Consensus 170 ~i~~~~~g~~~~~~l~~~I~~ll~~ 194 (207)
T 2r37_A 170 IPIMRWHHRTTVSNVKMDILSYMRR 194 (207)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHHHHHhh
Confidence 9999999988899999999998863
No 9
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=208.17 Aligned_cols=161 Identities=48% Similarity=0.862 Sum_probs=140.4
Q ss_pred CCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHH
Q 030845 6 SVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQ 85 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~ 85 (170)
...|..+|+|++++.+|+.+++++++||++||+||++|||+|+.+++.|++++++|+++++.+++|++|.+..+++++.+
T Consensus 21 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~ 100 (183)
T 2obi_A 21 WRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNE 100 (183)
T ss_dssp GGGCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHH
T ss_pred CcccCcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHH
Confidence 45788999999999999999999999999999999999999999999999999999998999999999977777778899
Q ss_pred HHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcC--CccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHH
Q 030845 86 EAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKT--GYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDI 163 (170)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (170)
.+++|+ ++++++||++.+.+.++.....+|+.+..... +..+..+.++|++||||++|+|++++.|..+++++.+.|
T Consensus 101 ~~~~~~-~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 179 (183)
T 2obi_A 101 EIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 179 (183)
T ss_dssp HHHHHH-HTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTS
T ss_pred HHHHHH-HHcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHH
Confidence 999999 68999999997666777777778877765443 444445788899999999999999999988888888777
Q ss_pred HHHh
Q 030845 164 KNAL 167 (170)
Q Consensus 164 ~~ll 167 (170)
+++|
T Consensus 180 ~~lL 183 (183)
T 2obi_A 180 PHYF 183 (183)
T ss_dssp GGGC
T ss_pred HHhC
Confidence 7654
No 10
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.4e-35 Score=203.76 Aligned_cols=152 Identities=38% Similarity=0.710 Sum_probs=130.4
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCH
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTS 84 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~ 84 (170)
...+|.++|+|++++.+|+++++++++||++||+||++|||+|+.+++.|++++++++++++.+++|++|.+..+++++.
T Consensus 22 ~~~~g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~ 101 (181)
T 2p31_A 22 SMQQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSN 101 (181)
T ss_dssp -----CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred cCCcCCccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCH
Confidence 45688999999999999999999999999999999999999999999999999999999899999999997767777789
Q ss_pred HHHHHHHHHh-cCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCc-------eEEEECCCCcEEEecCCCCCc
Q 030845 85 QEAHEFACTR-YKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNF-------TKFLVDTEGNVIGRYSPTTSP 156 (170)
Q Consensus 85 ~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p-------~~~lid~~G~i~~~~~g~~~~ 156 (170)
+.+++|++ + ++++||++.+.+..+.....+|.+. +..+| ++||||++|+|++++.|..++
T Consensus 102 ~~~~~~~~-~~~~~~~p~~~~~d~~g~~~~~~~~~~-----------~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~ 169 (181)
T 2p31_A 102 KEIESFAR-RTYSVSFPMFSKIAVTGTGAHPAFKYL-----------AQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSV 169 (181)
T ss_dssp HHHHHHHH-HHHCCCSCBBCCCCCSSTTSCHHHHHH-----------HHHHSCCCCSTTCEEEECTTSCEEEEECTTSCH
T ss_pred HHHHHHHH-hhcCCCceeEeecccCCccchhhhhhh-----------hhcCCCccccceeEEEEcCCCCEEEEeCCCCCH
Confidence 99999995 6 8999999976677777666666542 33345 899999999999999998888
Q ss_pred hhHHHHHHHHhh
Q 030845 157 MAIEGDIKNALG 168 (170)
Q Consensus 157 ~~~~~~l~~ll~ 168 (170)
+++.+.|+++|+
T Consensus 170 ~~l~~~i~~ll~ 181 (181)
T 2p31_A 170 EEVRPQITALVR 181 (181)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHHHhC
Confidence 999999988864
No 11
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=3.3e-34 Score=201.91 Aligned_cols=165 Identities=48% Similarity=0.860 Sum_probs=138.7
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCH
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTS 84 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~ 84 (170)
....+..+|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|.+..+++++.
T Consensus 21 ~~~~~~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~ 100 (190)
T 2vup_A 21 HMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNE 100 (190)
T ss_dssp ---CCCSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCH
T ss_pred cCCCCCcccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCH
Confidence 34678899999999999999999999999999999999999999999999999999999899999999997767777889
Q ss_pred HHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCc-ccccCceEEEECCCCcEEEecCCCCCchhHHHHH
Q 030845 85 QEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGS-RIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDI 163 (170)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (170)
+.+++|++++++++||++.+.|..+.....+|..+....-+..+. .++|.|++||||++|+|++++.|..+++++.+.|
T Consensus 101 ~~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i 180 (190)
T 2vup_A 101 EEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKL 180 (190)
T ss_dssp HHHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHH
Confidence 999999833789999999866777777777787765443222221 2334449999999999999999988899999999
Q ss_pred HHHhhc
Q 030845 164 KNALGD 169 (170)
Q Consensus 164 ~~ll~~ 169 (170)
++++++
T Consensus 181 ~~ll~~ 186 (190)
T 2vup_A 181 IPLLES 186 (190)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 999864
No 12
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-34 Score=200.87 Aligned_cols=163 Identities=44% Similarity=0.774 Sum_probs=121.8
Q ss_pred CCCCCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCC
Q 030845 1 MGASESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQE 80 (170)
Q Consensus 1 ~~~~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~ 80 (170)
||-.-...+..+|+|+++|.+|+++++++++||++||+||++||++|+ +++.|++++++++++++.+++|++|.+..++
T Consensus 1 ~~~~~~~~~~~~~~f~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~ 79 (171)
T 3cmi_A 1 MGHHHHHHMSEFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQE 79 (171)
T ss_dssp ---------CGGGGCCCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC---
T ss_pred CCcccccchhheeeeEEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCC
Confidence 444455678899999999999999999999999999999999999999 9999999999999989999999998766666
Q ss_pred CCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCc------eEEEECCCCcEEEecCCCC
Q 030845 81 PGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNF------TKFLVDTEGNVIGRYSPTT 154 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p------~~~lid~~G~i~~~~~g~~ 154 (170)
+++.+.+++|++++++++||++.|.+..+.....+|+.+.... +++..+| ++||||++|+|++++.|..
T Consensus 80 ~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~-----~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~ 154 (171)
T 3cmi_A 80 PGSDEEIAQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQK-----SGMLGLRGIKWNFEKFLVDKKGKVYERYSSLT 154 (171)
T ss_dssp ---------------CCCSCBBCCCBSSSTTBCHHHHHHHHHS-----CCSSSCCSCCSTTCEEEECSSSCEEEEECTTS
T ss_pred CCCHHHHHHHHHhccCCCceEEeeccCCCccchHHHHHHHhcc-----CCcCCCCcccccceEEEECCCCCEEEEeCCCC
Confidence 6788889999834789999999877777777777787665432 3555566 9999999999999999988
Q ss_pred CchhHHHHHHHHhhc
Q 030845 155 SPMAIEGDIKNALGD 169 (170)
Q Consensus 155 ~~~~~~~~l~~ll~~ 169 (170)
+++++.+.|++++++
T Consensus 155 ~~~~l~~~i~~ll~~ 169 (171)
T 3cmi_A 155 KPSSLSETIEELLKE 169 (171)
T ss_dssp CGGGGHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999875
No 13
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=100.00 E-value=2.6e-32 Score=186.32 Aligned_cols=150 Identities=15% Similarity=0.215 Sum_probs=126.7
Q ss_pred CCCCcccceEeecC--CCCeeecCccCCcEEEEEEecCCCCCchHh-HHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 7 VPQKSIYEFTVKDS--KGKDVDLSIYKGKVLLIVNVASKCGFTDSN-YSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 7 ~~~~~~p~f~l~~~--~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~-~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
++|..+|+|++.+. +|+.+++++++||++||+||++||++|+.+ ++.|++++++|++.++.+++|++|. ...+.++
T Consensus 1 s~g~~aP~f~l~~~~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~-~~~~~~~ 79 (158)
T 3eyt_A 1 SNAMKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVF-EHHEAMT 79 (158)
T ss_dssp CCCEECCCCCEEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCC-SCGGGSC
T ss_pred CCCCcCCCceehhhhcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecc-cccccCC
Confidence 36789999999994 899999999999999999999999999996 9999999999998899999999872 2333468
Q ss_pred HHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHH
Q 030845 84 SQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDI 163 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (170)
.+.+++|+ ++++++||++.|.+... ....+... +++.++|++||||++|+|++++.|..+.+++.+.|
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~d~~~~~-~~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 147 (158)
T 3eyt_A 80 PISLKAFL-HEYRIKFPVGVDQPGDG-AMPRTMAA----------YQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEI 147 (158)
T ss_dssp HHHHHHHH-HHTTCCSCEEEECCCSS-SSCHHHHH----------TTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHHH-HHcCCCceEEEcCccch-hhHHHHHH----------cCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHH
Confidence 89999999 58999999887643211 11123333 47888999999999999999999998999999999
Q ss_pred HHHhhc
Q 030845 164 KNALGD 169 (170)
Q Consensus 164 ~~ll~~ 169 (170)
++++++
T Consensus 148 ~~ll~~ 153 (158)
T 3eyt_A 148 ATLLGE 153 (158)
T ss_dssp HHHHTS
T ss_pred HHHhcc
Confidence 999864
No 14
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.5e-32 Score=186.70 Aligned_cols=151 Identities=12% Similarity=0.189 Sum_probs=129.7
Q ss_pred CCCCcccceEeec-CCCCeeecCccCCcEEEEEEecCCCCCchHh-HHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCH
Q 030845 7 VPQKSIYEFTVKD-SKGKDVDLSIYKGKVLLIVNVASKCGFTDSN-YSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTS 84 (170)
Q Consensus 7 ~~~~~~p~f~l~~-~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~-~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~ 84 (170)
..|.++|+|++.+ .+|+.+++++++||++||+||++||++|..+ ++.|++++++++++++.+++|++| +..++.++.
T Consensus 4 ~~g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~ 82 (160)
T 3lor_A 4 LDNAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV-FEHHDVMTP 82 (160)
T ss_dssp CTTCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCH
T ss_pred cCCCcCCCcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc-ccccccCCH
Confidence 3688999999999 8999999999999999999999999999995 999999999999989999999987 333344688
Q ss_pred HHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHH
Q 030845 85 QEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIK 164 (170)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~ 164 (170)
+.+++|+ ++++++||++.|..........+... +++..+|++||||++|+|++++.|..+.+++.+.|+
T Consensus 83 ~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 151 (160)
T 3lor_A 83 EALKVFI-DEFGIKFPVAVDMPREGQRIPSTMKK----------YRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLG 151 (160)
T ss_dssp HHHHHHH-HHTTCCSCEEEECCCTTCSSCHHHHH----------TTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHH
T ss_pred HHHHHHH-HHcCCCCcEEECCccccchhhhHHHh----------cccCccceEEEECCCCcEEEEecCcCCHHHHHHHHH
Confidence 9999999 58999999997654332333334444 478889999999999999999999989999999999
Q ss_pred HHhhc
Q 030845 165 NALGD 169 (170)
Q Consensus 165 ~ll~~ 169 (170)
+++++
T Consensus 152 ~ll~~ 156 (160)
T 3lor_A 152 SLLSE 156 (160)
T ss_dssp HHHTC
T ss_pred HHHhc
Confidence 99875
No 15
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=100.00 E-value=5.3e-32 Score=187.57 Aligned_cols=159 Identities=18% Similarity=0.263 Sum_probs=123.5
Q ss_pred CCCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCC-CchHhHHHHHHHHHHhccC--CeEEEEeeCCCCCCC
Q 030845 3 ASESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCG-FTDSNYSQLTDLYNKYKHK--GLEILAFPCNQFLKQ 79 (170)
Q Consensus 3 ~~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~-~C~~~~~~l~~~~~~~~~~--~v~vi~vs~d~~~~~ 79 (170)
+...+.+.++|+|+|+|++|+++++++++||++||+||++||| +|+.+++.|.++++++++. ++.+|+||+|+
T Consensus 3 a~~~P~~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp---- 78 (170)
T 4hde_A 3 ALRKPLNWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDP---- 78 (170)
T ss_dssp CCCSCCCBCCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT----
T ss_pred ccccCCCCcCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCc----
Confidence 3445678899999999999999999999999999999999998 6999999999999999754 58999999986
Q ss_pred CCCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhh----hcCCccCcccccCceEEEECCCCcEEEecCCC--
Q 030845 80 EPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKA----SKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPT-- 153 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~-- 153 (170)
++|+++.+++|+ ++++..++-+.. ..+.....+...... .......+.+.|.|++||||++|+|+.++.|.
T Consensus 79 ~~Dtp~~l~~y~-~~~~~~~~~~~~--ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~ 155 (170)
T 4hde_A 79 DLDKPENLKAFI-QKFTEDTSNWNL--LTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISN 155 (170)
T ss_dssp TTCCHHHHHHHH-TTTCSCCTTEEE--EBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSS
T ss_pred ccccHHHHHHHH-HHcCCCCCCcee--cCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCC
Confidence 678999999999 688887765432 234333322222221 11112226788999999999999999988763
Q ss_pred CCchhHHHHHHHHhh
Q 030845 154 TSPMAIEGDIKNALG 168 (170)
Q Consensus 154 ~~~~~~~~~l~~ll~ 168 (170)
.+.+++.++|++|++
T Consensus 156 ~~~~~l~~~ik~Lle 170 (170)
T 4hde_A 156 TPYEDIIRDMKRLAE 170 (170)
T ss_dssp CCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhC
Confidence 345778889988874
No 16
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.98 E-value=2.9e-31 Score=179.88 Aligned_cols=142 Identities=20% Similarity=0.236 Sum_probs=122.9
Q ss_pred CCCCCCCcccceEeecCCCCeeecC--ccCCcEEEEEEecCCCCC--chHhHHHHHHHHHHh-ccCCeEEEEeeCCCCCC
Q 030845 4 SESVPQKSIYEFTVKDSKGKDVDLS--IYKGKVLLIVNVASKCGF--TDSNYSQLTDLYNKY-KHKGLEILAFPCNQFLK 78 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~v~l~--~~~gk~~ll~f~~~~C~~--C~~~~~~l~~~~~~~-~~~~v~vi~vs~d~~~~ 78 (170)
....+|..+|+|++.+.+|+.++++ +++||++||+||++||++ |+.+++.|.+++++| +++++.+++|++|.
T Consensus 3 ~~l~~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~--- 79 (150)
T 3fw2_A 3 AKSEIGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDV--- 79 (150)
T ss_dssp CTTSTTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCS---
T ss_pred ccccCCCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCC---
Confidence 4578899999999999999999999 999999999999999999 999999999999999 88889999999984
Q ss_pred CCCCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchh
Q 030845 79 QEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMA 158 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~ 158 (170)
+.+.+++|+ ++++++|+++.|.... ...+... +++.++|++||||++|+|++++. +.++
T Consensus 80 ----~~~~~~~~~-~~~~~~~~~~~d~~~~---~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~---~~~~ 138 (150)
T 3fw2_A 80 ----DKQQWKDAI-KRDTLDWEQVCDFGGL---NSEVAKQ----------YSIYKIPANILLSSDGKILAKNL---RGEE 138 (150)
T ss_dssp ----CHHHHHHHH-HHTTCCSEEECCSCGG---GCHHHHH----------TTCCSSSEEEEECTTSBEEEESC---CHHH
T ss_pred ----CHHHHHHHH-HHhCCCceEEEcCccc---chHHHHH----------cCCCccCeEEEECCCCEEEEccC---CHHH
Confidence 578999999 6899999998643211 1223333 47889999999999999999975 7888
Q ss_pred HHHHHHHHhhc
Q 030845 159 IEGDIKNALGD 169 (170)
Q Consensus 159 ~~~~l~~ll~~ 169 (170)
+.+.|++++++
T Consensus 139 l~~~l~~ll~~ 149 (150)
T 3fw2_A 139 LKKKIENIVEE 149 (150)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999875
No 17
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.97 E-value=5.4e-32 Score=185.26 Aligned_cols=146 Identities=18% Similarity=0.225 Sum_probs=107.3
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
-...|.++|+|+|++.+|++++|++++||++||+|| ++|||+|..+++.|+++++++++.++.+++||.| +
T Consensus 3 ~l~vG~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d--------~ 74 (157)
T 4g2e_A 3 MVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVD--------P 74 (157)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESS--------C
T ss_pred cCCCCCCCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeeccc--------c
Confidence 357899999999999999999999999999999999 9999999999999999999999999999999976 6
Q ss_pred HHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhh--hcCCccCcccccCceEEEECCCCcEEEecCC-----CCCc
Q 030845 84 SQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKA--SKTGYFGSRIKWNFTKFLVDTEGNVIGRYSP-----TTSP 156 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g-----~~~~ 156 (170)
.+.+++|+ ++++++||+++|.+ + .+.+.++- ...+..+ .....|++||||++|+|++++.+ ..+.
T Consensus 75 ~~~~~~~~-~~~~~~~p~l~D~~--~----~v~~~ygv~~~~~~~~~-~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~ 146 (157)
T 4g2e_A 75 PFSNKAFK-EHNKLNFTILSDYN--R----EVVKKYNVAWEFPALPG-YVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPY 146 (157)
T ss_dssp HHHHHHHH-HHTTCCSEEEECTT--S----HHHHHTTCEEECTTSTT-CEEECEEEEEECTTSBEEEEEEESSTTCCCCH
T ss_pred hhHHHHHH-HHcCCcEEEEEcCC--c----HHHHHcCCccccccCCC-cceeeeeEEEECCCCEEEEEEECCCCCCCCCH
Confidence 88899998 68999999997633 2 12222210 0001111 12246899999999999988743 2334
Q ss_pred hhHHHHHHHH
Q 030845 157 MAIEGDIKNA 166 (170)
Q Consensus 157 ~~~~~~l~~l 166 (170)
+++.+.|++|
T Consensus 147 ~eil~~l~~L 156 (157)
T 4g2e_A 147 DEIEKVVKSL 156 (157)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 5566666543
No 18
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.97 E-value=2e-31 Score=179.36 Aligned_cols=137 Identities=17% Similarity=0.197 Sum_probs=108.3
Q ss_pred CCCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCC
Q 030845 3 ASESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPG 82 (170)
Q Consensus 3 ~~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~ 82 (170)
......|..+|+|++ +.+|+.+++++++||++||+||++||++|..+++.|++++++|+++++.+++|++|.
T Consensus 4 ~~~l~~G~~~P~f~l-~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~------- 75 (143)
T 4fo5_A 4 TEGVNPGDLAPRIEF-LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDE------- 75 (143)
T ss_dssp CBSSSTTSBCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCS-------
T ss_pred ccccCCcccCCceEE-cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccC-------
Confidence 345689999999999 999999999999999999999999999999999999999999998899999999985
Q ss_pred CHHHHHHHHHHhcCCCC-ceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHH
Q 030845 83 TSQEAHEFACTRYKAEY-PIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEG 161 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~ 161 (170)
+.+.+++++ ++++++| +.+.|. .+. ...+... +++..+|++||||++|+|+++.. ..+++.+
T Consensus 76 ~~~~~~~~~-~~~~~~~~~~~~d~--~~~-~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~ 138 (143)
T 4fo5_A 76 KESIFTETV-KIDKLDLSTQFHEG--LGK-ESELYKK----------YDLRKGFKNFLINDEGVIIAANV---TPEKLTE 138 (143)
T ss_dssp CHHHHHHHH-HHHTCCGGGEEECT--TGG-GSHHHHH----------TTGGGCCCEEEECTTSBEEEESC---CHHHHHH
T ss_pred CHHHHHHHH-HHhCCCCceeeecc--ccc-chHHHHH----------cCCCCCCcEEEECCCCEEEEccC---CHHHHHH
Confidence 578899999 5889999 666542 221 1222322 47889999999999999999865 3555555
Q ss_pred HHH
Q 030845 162 DIK 164 (170)
Q Consensus 162 ~l~ 164 (170)
.|+
T Consensus 139 ~l~ 141 (143)
T 4fo5_A 139 ILK 141 (143)
T ss_dssp HHT
T ss_pred HHH
Confidence 554
No 19
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.97 E-value=4.4e-31 Score=182.85 Aligned_cols=158 Identities=21% Similarity=0.314 Sum_probs=123.0
Q ss_pred CCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCC-CchHhHHHHHHHHHHhccCC--eEEEEeeCCCCCCCC
Q 030845 4 SESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCG-FTDSNYSQLTDLYNKYKHKG--LEILAFPCNQFLKQE 80 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~-~C~~~~~~l~~~~~~~~~~~--v~vi~vs~d~~~~~~ 80 (170)
.....|..+|+|+|++.+|+.+++++++||++||+||++||+ +|+.+++.|.++++++++++ +.+|+|++|+ +
T Consensus 5 ~~l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~----~ 80 (174)
T 1xzo_A 5 IKDPLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDP----E 80 (174)
T ss_dssp CCSCCCEECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCT----T
T ss_pred CcCccccccCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCC----C
Confidence 346789999999999999999999999999999999999999 99999999999999998876 9999999974 3
Q ss_pred CCCHHHHHHHHHHhcCCCC---ceeEEeecCCCCCchHHHH--Hhhhc-CCccCcccccCceEEEECCCCcEEEecCCCC
Q 030845 81 PGTSQEAHEFACTRYKAEY---PIFQKVRVNGPNAEPLYKF--LKASK-TGYFGSRIKWNFTKFLVDTEGNVIGRYSPTT 154 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~--~~~~~-~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~ 154 (170)
+++.+.+++|+ ++++++| +++.|.+ +. ....|.. +.... .....+++.++|++||||++|+|++++.|..
T Consensus 81 ~d~~~~~~~~~-~~~~~~~~~~~~l~d~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~ 156 (174)
T 1xzo_A 81 NDKPKQLKKFA-ANYPLSFDNWDFLTGYS--QS-EIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVE 156 (174)
T ss_dssp TCCHHHHHHHH-TTSCCCGGGEEEEBCSC--HH-HHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSS
T ss_pred CCCHHHHHHHH-HHcCCCCcceEEEeCCC--HH-HHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCC
Confidence 46789999999 5889998 5554311 11 1111211 00000 0001146778899999999999999998865
Q ss_pred --CchhHHHHHHHHhhc
Q 030845 155 --SPMAIEGDIKNALGD 169 (170)
Q Consensus 155 --~~~~~~~~l~~ll~~ 169 (170)
+.+++.+.|++++++
T Consensus 157 ~~~~~~l~~~l~~ll~~ 173 (174)
T 1xzo_A 157 NTPYDDIISDVKSASTL 173 (174)
T ss_dssp SCCHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHhc
Confidence 467899999998864
No 20
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.97 E-value=7.4e-31 Score=183.44 Aligned_cols=144 Identities=12% Similarity=0.158 Sum_probs=123.0
Q ss_pred CCCCCcccceEeecC--CCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCe------EEEEeeCCCCC
Q 030845 6 SVPQKSIYEFTVKDS--KGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGL------EILAFPCNQFL 77 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~--~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v------~vi~vs~d~~~ 77 (170)
..++..+|+|++++. +|+.+++++++||++||+||++||++|+.+++.|.+++++++++++ .+++|++|.
T Consensus 31 ~~~g~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~-- 108 (183)
T 3lwa_A 31 EADRQQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD-- 108 (183)
T ss_dssp GGGCCCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC--
T ss_pred cccCCCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC--
Confidence 356789999999999 9999999999999999999999999999999999999999998888 999999872
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCch
Q 030845 78 KQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPM 157 (170)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~ 157 (170)
++.+.+++|+ ++++++||++.|. .+. ....|. ++++..+|++||||++|+|++++.|..+.+
T Consensus 109 ----~~~~~~~~~~-~~~~~~~~~~~d~--~~~-~~~~~~----------~~~v~~~P~~~lid~~G~i~~~~~g~~~~~ 170 (183)
T 3lwa_A 109 ----YSRDIAQDFV-TDNGLDYPSIYDP--PFM-TAASLG----------GVPASVIPTTIVLDKQHRPAAVFLREVTSK 170 (183)
T ss_dssp ----CCHHHHHHHH-HHTTCCSCEEECT--TCG-GGGGTT----------TCCTTCCSEEEEECTTSCEEEEECSCCCHH
T ss_pred ----CCHHHHHHHH-HHcCCCccEEECC--cch-HHHHhc----------cCCCCCCCeEEEECCCCcEEEEEcCCCCHH
Confidence 2588999999 5899999999653 222 121121 136788899999999999999999988999
Q ss_pred hHHHHHHHHhhc
Q 030845 158 AIEGDIKNALGD 169 (170)
Q Consensus 158 ~~~~~l~~ll~~ 169 (170)
++.+.|++++++
T Consensus 171 ~l~~~l~~ll~~ 182 (183)
T 3lwa_A 171 DVLDVALPLVDE 182 (183)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999999875
No 21
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.97 E-value=1.9e-30 Score=186.41 Aligned_cols=147 Identities=16% Similarity=0.238 Sum_probs=125.8
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCc-EEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGK-VLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk-~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
...+|..+|+|+|++.+|+.+++++++|| ++||+||++|||+|+.+++.|++++++|+++++.+|+|++|.+..++.++
T Consensus 31 ~l~~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~ 110 (218)
T 3u5r_E 31 SITLGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEET 110 (218)
T ss_dssp CCCTTCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGS
T ss_pred cCCCCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCC
Confidence 46789999999999999999999999999 59999999999999999999999999999999999999998766655678
Q ss_pred HHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecC---------CCC
Q 030845 84 SQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYS---------PTT 154 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~---------g~~ 154 (170)
.+.+++|+ ++++++||++.|. . ..+.+. +++..+|++||||++|+|+++.. +..
T Consensus 111 ~~~~~~~~-~~~~~~~~~l~D~--~----~~~~~~----------~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~ 173 (218)
T 3u5r_E 111 LERVGAEV-KAYGYGFPYLKDA--S----QSVAKA----------YGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDV 173 (218)
T ss_dssp HHHHHHHH-HHHTCCSCEEECT--T----CHHHHH----------HTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCC
T ss_pred HHHHHHHH-HHhCCCccEEECC--c----cHHHHH----------cCCCCCCeEEEECCCCcEEEecccccccccccccc
Confidence 99999999 5889999999752 1 122322 37888999999999999998742 234
Q ss_pred CchhHHHHHHHHhh
Q 030845 155 SPMAIEGDIKNALG 168 (170)
Q Consensus 155 ~~~~~~~~l~~ll~ 168 (170)
+.+++.+.|+++++
T Consensus 174 ~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 174 TGADLRAAVDAVLK 187 (218)
T ss_dssp CCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHc
Confidence 56889999999875
No 22
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.97 E-value=5.3e-31 Score=176.81 Aligned_cols=137 Identities=15% Similarity=0.122 Sum_probs=114.1
Q ss_pred CCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHH---HHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 7 VPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTD---LYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 7 ~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~---~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
.+|..+|+|++++.+|+.+++++++||++||+||++||++|+.+++.|.+ +++++++.++.+++|++|. +
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~-------~ 74 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDE-------N 74 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSS-------C
T ss_pred CCCCcCCCCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecC-------C
Confidence 57899999999999999999999999999999999999999999999998 9999998899999999874 6
Q ss_pred HHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHH
Q 030845 84 SQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDI 163 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (170)
.+.+++|+ ++++++|+++.|. .+. +.. ...+++.++|++||||++|+|+++ ..+.+++.+.|
T Consensus 75 ~~~~~~~~-~~~~~~~~~~~d~--~~~----~~~--------~~~~~v~~~P~~~lid~~G~i~~~---~~~~~~l~~~l 136 (142)
T 3ewl_A 75 REEWATKA-VYMPQGWIVGWNK--AGD----IRT--------RQLYDIRATPTIYLLDGRKRVILK---DTSMEQLIDYL 136 (142)
T ss_dssp HHHHHHHH-TTSCTTCEEEECT--TCH----HHH--------TTCSCCCSSSEEEEECTTCBEEEC---SCCHHHHHHHH
T ss_pred HHHHHHHH-HHcCCCcceeeCC--ccc----hhh--------HHHcCCCCCCeEEEECCCCCEEec---CCCHHHHHHHH
Confidence 88899999 6899999988642 221 110 001588999999999999999985 35678888888
Q ss_pred HHHhh
Q 030845 164 KNALG 168 (170)
Q Consensus 164 ~~ll~ 168 (170)
+++.+
T Consensus 137 ~~~~~ 141 (142)
T 3ewl_A 137 ATQAG 141 (142)
T ss_dssp HC---
T ss_pred HHHcc
Confidence 77654
No 23
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.97 E-value=4.6e-30 Score=172.94 Aligned_cols=142 Identities=19% Similarity=0.220 Sum_probs=120.2
Q ss_pred CCCCCCCcccceEeecCCCCeeecC--ccCCcEEEEEEecCCCCCchHhHHHHHHHHHHh-ccCCeEEEEeeCCCCCCCC
Q 030845 4 SESVPQKSIYEFTVKDSKGKDVDLS--IYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKY-KHKGLEILAFPCNQFLKQE 80 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~v~l~--~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~-~~~~v~vi~vs~d~~~~~~ 80 (170)
....+|..+|+|++.+.+|+.++++ +++||++||+||++||++|+.+++.|.++++++ ++.++.+++|++|.
T Consensus 3 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~----- 77 (148)
T 3fkf_A 3 AKVTVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDI----- 77 (148)
T ss_dssp --CCTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCS-----
T ss_pred ccccCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCC-----
Confidence 4578999999999999999999999 999999999999999999999999999999999 88889999999985
Q ss_pred CCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHH
Q 030845 81 PGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIE 160 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~ 160 (170)
+.+.+++++ ++++++|+++.|.... ...+... +++.++|+++|+|++|++++++. +.+++.
T Consensus 78 --~~~~~~~~~-~~~~~~~~~~~d~~~~---~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~---~~~~l~ 138 (148)
T 3fkf_A 78 --DREAWETAI-KKDTLSWDQVCDFTGL---SSETAKQ----------YAILTLPTNILLSPTGKILARDI---QGEALT 138 (148)
T ss_dssp --CHHHHHHHH-HHTTCCSEEECCSCGG---GCHHHHH----------TTCCSSSEEEEECTTSBEEEESC---CHHHHH
T ss_pred --CHHHHHHHH-HHcCCCceEEEccCCc---chHHHHh----------cCCCCcCEEEEECCCCeEEEecC---CHHHHH
Confidence 578899999 5889999988643111 1223333 47889999999999999999875 788899
Q ss_pred HHHHHHhhc
Q 030845 161 GDIKNALGD 169 (170)
Q Consensus 161 ~~l~~ll~~ 169 (170)
+.|++++++
T Consensus 139 ~~l~~ll~~ 147 (148)
T 3fkf_A 139 GKLKELLKT 147 (148)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHcc
Confidence 999998864
No 24
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.97 E-value=1e-31 Score=185.06 Aligned_cols=149 Identities=13% Similarity=0.211 Sum_probs=117.0
Q ss_pred CCCCCcccceEeecCCCCeeecCcc--CCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCC
Q 030845 6 SVPQKSIYEFTVKDSKGKDVDLSIY--KGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPG 82 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~v~l~~~--~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~ 82 (170)
...|.++|+|+|++.+|++++|+++ +||++||+|| ++|||+|+.+++.|++++++|++.|+.+++||.|
T Consensus 5 l~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d-------- 76 (164)
T 4gqc_A 5 VELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVD-------- 76 (164)
T ss_dssp CCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESS--------
T ss_pred ccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCC--------
Confidence 5689999999999999999999998 8999999988 9999999999999999999999999999999976
Q ss_pred CHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCC-----CCCch
Q 030845 83 TSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSP-----TTSPM 157 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g-----~~~~~ 157 (170)
+.+.+++|+ ++++++||+++|.+ +. ....|..+.... .+......|++||||++|+|++++.+ ..+.+
T Consensus 77 ~~~~~~~~~-~~~~~~fp~l~D~~--~~-v~~~ygv~~~~~---~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~ 149 (164)
T 4gqc_A 77 SPWCLKKFK-DENRLAFNLLSDYN--RE-VIKLYNVYHEDL---KGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYD 149 (164)
T ss_dssp CHHHHHHHH-HHTTCCSEEEECTT--SH-HHHHTTCEEEEE---TTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHH
T ss_pred CHHHHHHHH-HhcCcccceeecCc--hH-HHHHcCCccccc---ccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHH
Confidence 688899998 68999999997633 21 222221111000 01122246899999999999998643 33457
Q ss_pred hHHHHHHHHhhc
Q 030845 158 AIEGDIKNALGD 169 (170)
Q Consensus 158 ~~~~~l~~ll~~ 169 (170)
++.+.|++|..+
T Consensus 150 eil~~l~~l~~e 161 (164)
T 4gqc_A 150 EVVREANKIAGE 161 (164)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc
Confidence 788888888765
No 25
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.97 E-value=3.4e-30 Score=174.96 Aligned_cols=140 Identities=18% Similarity=0.216 Sum_probs=119.4
Q ss_pred CCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHH
Q 030845 6 SVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQ 85 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~ 85 (170)
..+|..+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|.+++++++++++.+++|++|. +.+
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~-------~~~ 75 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDR-------REE 75 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCS-------CHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccC-------CHH
Confidence 5678899999999999999999999999999999999999999999999999999998899999999884 678
Q ss_pred HHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHH
Q 030845 86 EAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKN 165 (170)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ 165 (170)
.+++|+ ++++++|+++.|.... ...+... +++..+|++||||++|++++++. ..+++.+.|++
T Consensus 76 ~~~~~~-~~~~~~~~~~~d~~~~---~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ 138 (152)
T 2lrn_A 76 DWKKAI-EEDKSYWNQVLLQKDD---VKDVLES----------YCIVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEK 138 (152)
T ss_dssp HHHHHH-HHHTCCSEEEEECHHH---HHHHHHH----------TTCCSSCEEEEECTTSEEEEECC---CTTHHHHHHHH
T ss_pred HHHHHH-HHhCCCCeEEecccch---hHHHHHH----------hCCCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHH
Confidence 899998 5889999998753110 1122222 47888999999999999999974 56789999998
Q ss_pred Hhhc
Q 030845 166 ALGD 169 (170)
Q Consensus 166 ll~~ 169 (170)
++++
T Consensus 139 l~~~ 142 (152)
T 2lrn_A 139 FVNG 142 (152)
T ss_dssp HHTS
T ss_pred HHhh
Confidence 8764
No 26
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.97 E-value=3.6e-30 Score=172.95 Aligned_cols=136 Identities=13% Similarity=0.064 Sum_probs=112.4
Q ss_pred CCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHH---HHHHhccCCeEEEEeeCCCCCCCC
Q 030845 4 SESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTD---LYNKYKHKGLEILAFPCNQFLKQE 80 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~---~~~~~~~~~v~vi~vs~d~~~~~~ 80 (170)
....+|..+|+|++++.+|+.+++++++||++||+||++||++|+.+++.|.+ +++++++.++.+++|+.|.
T Consensus 3 ~~~~~G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~----- 77 (142)
T 3eur_A 3 AKNRLGTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDE----- 77 (142)
T ss_dssp CTTCTTSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSS-----
T ss_pred hhhcCCCccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCC-----
Confidence 45678999999999999999999999999999999999999999999999999 9999998899999999874
Q ss_pred CCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHH
Q 030845 81 PGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIE 160 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~ 160 (170)
..+.+++++ ++++.+|+.+.|. .+. ..+.. .+++..+|++||||++|+|+++..+ .+++.
T Consensus 78 --~~~~~~~~~-~~~~~~~~~~~d~--~~~--~~~~~----------~~~v~~~P~~~lid~~G~i~~~~~~---~~~l~ 137 (142)
T 3eur_A 78 --ELDEWKKHR-NDFAKEWTNGYDK--ELV--IKNKN----------LYDLRAIPTLYLLDKNKTVLLKDAT---LQKVE 137 (142)
T ss_dssp --CHHHHHHHG-GGSCTTSEEEECT--TCH--HHHTT----------CSCCTTCSEEEEECTTCBEEEEEEC---HHHHH
T ss_pred --CHHHHHHHH-HhcccccccccCc--cch--hhhhh----------hcCCCcCCeEEEECCCCcEEecCCC---HHHHH
Confidence 678889998 5888888876542 211 00000 1578889999999999999998753 45555
Q ss_pred HHHH
Q 030845 161 GDIK 164 (170)
Q Consensus 161 ~~l~ 164 (170)
+.|+
T Consensus 138 ~~l~ 141 (142)
T 3eur_A 138 QYLA 141 (142)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
No 27
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.97 E-value=4e-30 Score=176.41 Aligned_cols=127 Identities=15% Similarity=0.231 Sum_probs=109.1
Q ss_pred CCCCCcccceEeecCCCCeeecCccCCcE-EEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 6 SVPQKSIYEFTVKDSKGKDVDLSIYKGKV-LLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~v~l~~~~gk~-~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
+.+|..+|+|++++.+|+.+++++++||+ +||+|| ++|||+|+.+++.|++++++++++|+.+++|++| +
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d--------~ 73 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSD--------D 73 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC--------C
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC--------C
Confidence 46789999999999999999999999997 999999 9999999999999999999999999999999986 6
Q ss_pred HHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCccccc----CceEEEECCCCcEEEecCCCCCch
Q 030845 84 SQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKW----NFTKFLVDTEGNVIGRYSPTTSPM 157 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~----~p~~~lid~~G~i~~~~~g~~~~~ 157 (170)
.+.+++|+ ++++++|+++.|.+ ..+... +++.. +|++||||++|+|++++.|....+
T Consensus 74 ~~~~~~~~-~~~~~~~~~~~d~~------~~~~~~----------~~v~~~~~~~P~~~lid~~G~i~~~~~g~~~~~ 134 (161)
T 3drn_A 74 INSHKRFK-EKYKLPFILVSDPD------KKIREL----------YGAKGFILPARITFVIDKKGIIRHIYNSQMNPA 134 (161)
T ss_dssp HHHHHHHH-HHTTCCSEEEECTT------SHHHHH----------TTCCCSSSCCCEEEEECTTSBEEEEEECSSCTT
T ss_pred HHHHHHHH-HHhCCCceEEECCc------HHHHHH----------cCCCCcCcccceEEEECCCCEEEEEEecCCCCC
Confidence 88999999 58899999997521 122332 35555 899999999999999998844443
No 28
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.97 E-value=6.3e-30 Score=175.42 Aligned_cols=147 Identities=19% Similarity=0.303 Sum_probs=125.0
Q ss_pred CCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 4 SESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
....+|..+|+|++.+.+|+.+++++++||++||+||++||++|..+++.|.+++++++++++.+++|++|. +
T Consensus 6 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~-------~ 78 (165)
T 3or5_A 6 QADARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNE-------Q 78 (165)
T ss_dssp -CCCCCCBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSC-------C
T ss_pred hhhcCCCCCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC-------C
Confidence 456789999999999999999999999999999999999999999999999999999999899999999874 6
Q ss_pred HHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHH
Q 030845 84 SQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDI 163 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (170)
.+.+++|+ ++++++|+++.+.+ .+...+.. ....++..+|++||||++|+|+.++.|..+.+++.+.|
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~----~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 146 (165)
T 3or5_A 79 LPNVKNYM-KTQGIIYPVMMATP-------ELIRAFNG----YIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIV 146 (165)
T ss_dssp HHHHHHHH-HHHTCCSCEEECCH-------HHHHHHHT----TSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHH
T ss_pred HHHHHHHH-HHcCCCCceEecCH-------HHHHHHhh----hhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHH
Confidence 88899999 58899999986421 22322211 11126788899999999999999999988899999999
Q ss_pred HHHhhc
Q 030845 164 KNALGD 169 (170)
Q Consensus 164 ~~ll~~ 169 (170)
++++++
T Consensus 147 ~~~l~~ 152 (165)
T 3or5_A 147 KMALGA 152 (165)
T ss_dssp HHHHC-
T ss_pred HHHHhh
Confidence 999864
No 29
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.97 E-value=2.5e-30 Score=175.43 Aligned_cols=137 Identities=13% Similarity=0.177 Sum_probs=113.3
Q ss_pred ccceEeec-CCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHH
Q 030845 12 IYEFTVKD-SKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEF 90 (170)
Q Consensus 12 ~p~f~l~~-~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~ 90 (170)
+|.++++. .+|+.+++++++||++||+||++||++|+.+++.|.++++++++.++.+++|++| +.+.+++|
T Consensus 3 ~pa~~~~~~~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d--------~~~~~~~~ 74 (151)
T 3raz_A 3 LSADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALD--------TSDNIGNF 74 (151)
T ss_dssp ----CEEETTTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESS--------CHHHHHHH
T ss_pred CCcchhhcccCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC--------ChHHHHHH
Confidence 44555555 7999999999999999999999999999999999999999998889999999986 57899999
Q ss_pred HHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 91 ACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 91 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+ ++++++||++.+.+ .....++..+. ..+..+|++||||++|++++++.|..+.+++.+.|+++.+
T Consensus 75 ~-~~~~~~~~~~~~~~---~~~~~~~~~~~--------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 75 L-KQTPVSYPIWRYTG---ANSRNFMKTYG--------NTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp H-HHSCCSSCEEEECC---SCHHHHHHTTT--------CCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHT
T ss_pred H-HHcCCCCceEecCc---cchHHHHHHhC--------CccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 9 58999999997532 22333333311 1278889999999999999999999999999999998875
No 30
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.97 E-value=5.3e-30 Score=173.68 Aligned_cols=138 Identities=20% Similarity=0.361 Sum_probs=121.9
Q ss_pred CCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHH
Q 030845 8 PQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEA 87 (170)
Q Consensus 8 ~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~ 87 (170)
.|..+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|.++++++++.++.+++|++|. +.+.+
T Consensus 2 ~G~~~p~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~-------~~~~~ 74 (151)
T 2f9s_A 2 EGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGE-------SKIAV 74 (151)
T ss_dssp CCEECCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESC-------CHHHH
T ss_pred CCCcCCcceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC-------CHHHH
Confidence 57889999999999999999999999999999999999999999999999999998889999999874 57889
Q ss_pred HHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 88 HEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 88 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
++|+ ++++++|+++.|.. ..+... +++.++|++||||++|+++.++.|..+.+++.+.|++++
T Consensus 75 ~~~~-~~~~~~~~~~~d~~------~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll 137 (151)
T 2f9s_A 75 HNFM-KSYGVNFPVVLDTD------RQVLDA----------YDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIK 137 (151)
T ss_dssp HHHH-HHHTCCSCEEEETT------SHHHHH----------TTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHS
T ss_pred HHHH-HHcCCCceEEECCc------hHHHHh----------cCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 9999 58899999986521 122332 478889999999999999999999888999999999987
Q ss_pred hc
Q 030845 168 GD 169 (170)
Q Consensus 168 ~~ 169 (170)
+.
T Consensus 138 ~~ 139 (151)
T 2f9s_A 138 PG 139 (151)
T ss_dssp CC
T ss_pred hh
Confidence 63
No 31
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.97 E-value=3.3e-30 Score=176.72 Aligned_cols=151 Identities=11% Similarity=0.159 Sum_probs=116.7
Q ss_pred cccceEeecCCCCeeecCccCCcEEEEEEecCCCCC-chHhHHHHHHHHHHhcc----CCeEEEEeeCCCCCCCCCCCHH
Q 030845 11 SIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGF-TDSNYSQLTDLYNKYKH----KGLEILAFPCNQFLKQEPGTSQ 85 (170)
Q Consensus 11 ~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~-C~~~~~~l~~~~~~~~~----~~v~vi~vs~d~~~~~~~~~~~ 85 (170)
.+|+|+|++.+|+++++++++||++||+||++||++ |+.+++.|+++++++++ .++.+++|++|+ ++++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~----~~d~~~ 77 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDP----ERDTKE 77 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCT----TTCCHH
T ss_pred CCCCeEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCC----CCCCHH
Confidence 479999999999999999999999999999999998 99999999999999986 489999999975 456789
Q ss_pred HHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhc-C----CccCcccccCceEEEECCCCcEEEecCCCCCchhHH
Q 030845 86 EAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASK-T----GYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIE 160 (170)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~----~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~ 160 (170)
.+++|+ ++++.+|+++... ......+.+.+.... . ....+.+.|.+++||||++|+|++++.|..+++++.
T Consensus 78 ~~~~~~-~~~~~~~~~l~~~---~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~ 153 (164)
T 2ggt_A 78 AIANYV-KEFSPKLVGLTGT---REEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIA 153 (164)
T ss_dssp HHHHHH-HTTCSSCEEEECC---HHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHH
T ss_pred HHHHHH-HHcCCCeEEEeCC---HHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHH
Confidence 999999 5889999887421 000111222111000 0 000012334449999999999999999988899999
Q ss_pred HHHHHHhhc
Q 030845 161 GDIKNALGD 169 (170)
Q Consensus 161 ~~l~~ll~~ 169 (170)
+.|++++++
T Consensus 154 ~~l~~ll~~ 162 (164)
T 2ggt_A 154 ASIATHMRP 162 (164)
T ss_dssp HHHHHHHGG
T ss_pred HHHHHHHHh
Confidence 999999875
No 32
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.97 E-value=7.2e-30 Score=171.98 Aligned_cols=144 Identities=15% Similarity=0.139 Sum_probs=121.1
Q ss_pred CCCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCC
Q 030845 3 ASESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPG 82 (170)
Q Consensus 3 ~~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~ 82 (170)
+.+..+|..+|+|++.+.+|+.+++++++||++||+||++||++|..+++.|.+++++++++++.+++|++|.
T Consensus 2 ~~~~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~------- 74 (148)
T 3hcz_A 2 NAPLLLGKKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIER------- 74 (148)
T ss_dssp CCCCCTTSBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCS-------
T ss_pred CCccCCCCcCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecC-------
Confidence 3567899999999999999999999999999999999999999999999999999999998899999999874
Q ss_pred CHHHHHHHHHHhcCCC-CceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHH
Q 030845 83 TSQEAHEFACTRYKAE-YPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEG 161 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~ 161 (170)
+.+.+++|+ ++++++ |+++.| ..+. ..+... +++..+|+++|||++|+++.++.|....+++.+
T Consensus 75 ~~~~~~~~~-~~~~~~~~~~~~d--~~~~--~~~~~~----------~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~ 139 (148)
T 3hcz_A 75 KDEEWLKFI-RSKKIGGWLNVRD--SKNH--TDFKIT----------YDIYATPVLYVLDKNKVIIAKRIGYENLDDFLV 139 (148)
T ss_dssp SSHHHHHHH-HHHTCTTSEEEEC--TTCC--CCHHHH----------HCCCSSCEEEEECTTCBEEEESCCGGGHHHHHH
T ss_pred CHHHHHHHH-HHcCCCCceEEec--cccc--hhHHHh----------cCcCCCCEEEEECCCCcEEEecCCHHHHHHHHH
Confidence 567899999 588888 888864 2222 112322 378889999999999999999988756666666
Q ss_pred HHHHHhh
Q 030845 162 DIKNALG 168 (170)
Q Consensus 162 ~l~~ll~ 168 (170)
.+.++++
T Consensus 140 ~l~~~l~ 146 (148)
T 3hcz_A 140 QYEKSLK 146 (148)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 6666654
No 33
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.97 E-value=6.1e-30 Score=179.47 Aligned_cols=148 Identities=17% Similarity=0.262 Sum_probs=124.2
Q ss_pred CCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 4 SESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
.....|..+|+|++.+.+|+.+++++++||++||+||++||++|..+++.|++++++++++ +.+++|++|....++.++
T Consensus 5 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~ 83 (188)
T 2cvb_A 5 PELPLESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDA 83 (188)
T ss_dssp CCCCTTCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGS
T ss_pred CcCCCCCCCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccC
Confidence 3567899999999999999999999999999999999999999999999999999999988 999999998644444468
Q ss_pred HHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEec--------CCCCC
Q 030845 84 SQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRY--------SPTTS 155 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~--------~g~~~ 155 (170)
.+.+++|+ ++++++|+++.|.+ ..+... +++..+|++||||++|+|+++. .|..+
T Consensus 84 ~~~~~~~~-~~~~~~~~~~~d~~------~~~~~~----------~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~ 146 (188)
T 2cvb_A 84 PEKMAAFA-EEHGIFFPYLLDET------QEVAKA----------YRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQ 146 (188)
T ss_dssp HHHHHHHH-HHHTCCSCEEECSS------SHHHHH----------TTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCC
T ss_pred HHHHHHHH-HHhCCCceEEECCc------chHHHH----------cCCCCCCeEEEECCCCcEEEEEecCCccccccccC
Confidence 89999999 58899999886421 122222 4788889999999999999982 12336
Q ss_pred chhHHHHHHHHhhc
Q 030845 156 PMAIEGDIKNALGD 169 (170)
Q Consensus 156 ~~~~~~~l~~ll~~ 169 (170)
.+++.+.|++++++
T Consensus 147 ~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 147 SHDLEAAIEALLRG 160 (188)
T ss_dssp CCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC
Confidence 78899999998863
No 34
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.97 E-value=4.2e-30 Score=176.41 Aligned_cols=148 Identities=16% Similarity=0.272 Sum_probs=113.0
Q ss_pred CCCCCCcccceE--eecCCCCeeecCccCCcEEEEEEec-CCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCC
Q 030845 5 ESVPQKSIYEFT--VKDSKGKDVDLSIYKGKVLLIVNVA-SKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEP 81 (170)
Q Consensus 5 ~~~~~~~~p~f~--l~~~~G~~v~l~~~~gk~~ll~f~~-~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~ 81 (170)
...+|.++|+|+ +.+.+|+++++++++||++||+||+ +|||+|+.+++.|++++++|+++|+.+++|+.|
T Consensus 6 ~l~~G~~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d------- 78 (163)
T 3gkn_A 6 DAVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD------- 78 (163)
T ss_dssp CCCCCCCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS-------
T ss_pred ccccCCcCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC-------
Confidence 367899999999 9999999999999999999999997 999999999999999999999999999999986
Q ss_pred CCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcC-CccC-cccccCceEEEECCCCcEEEecCCCCCc---
Q 030845 82 GTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKT-GYFG-SRIKWNFTKFLVDTEGNVIGRYSPTTSP--- 156 (170)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~-~~v~~~p~~~lid~~G~i~~~~~g~~~~--- 156 (170)
+.+.+++|+ ++++++||++.|. .+ .+...+..... ...+ ....++|++||||++|+|++++.+....
T Consensus 79 -~~~~~~~~~-~~~~~~~~~~~d~--~~----~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~ 150 (163)
T 3gkn_A 79 -SVKSHDNFC-AKQGFAFPLVSDG--DE----ALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHA 150 (163)
T ss_dssp -CHHHHHHHH-HHHCCSSCEEECT--TC----HHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHH
T ss_pred -CHHHHHHHH-HHhCCCceEEECC--cH----HHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCH
Confidence 689999999 5889999999752 22 22222210000 0000 0011279999999999999998554332
Q ss_pred hhHHHHHHHHh
Q 030845 157 MAIEGDIKNAL 167 (170)
Q Consensus 157 ~~~~~~l~~ll 167 (170)
+++.+.|+++.
T Consensus 151 ~~il~~l~~l~ 161 (163)
T 3gkn_A 151 DAVLAALKAHA 161 (163)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 34555555544
No 35
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.97 E-value=7.9e-30 Score=176.06 Aligned_cols=149 Identities=9% Similarity=0.167 Sum_probs=117.5
Q ss_pred cceEeecCCCCeeecCccCCcEEEEEEecCCCCC-chHhHHHHHHHHHHhcc----CCeEEEEeeCCCCCCCCCCCHHHH
Q 030845 13 YEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGF-TDSNYSQLTDLYNKYKH----KGLEILAFPCNQFLKQEPGTSQEA 87 (170)
Q Consensus 13 p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~-C~~~~~~l~~~~~~~~~----~~v~vi~vs~d~~~~~~~~~~~~~ 87 (170)
|+|+|.+.+|+.+++++++||++||+||++||++ |+.+++.|+++++++++ .++.+++|++|+ ++++.+.+
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~----~~d~~~~~ 82 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDP----ERDDVEAM 82 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCS----TTCCHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECC----CCCCHHHH
Confidence 8999999999999999999999999999999998 99999999999999974 479999999984 34678999
Q ss_pred HHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhc-----CCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHH
Q 030845 88 HEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASK-----TGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGD 162 (170)
Q Consensus 88 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (170)
++|+ ++++.+|+.+.+.. .....+...+.... .....+.+.++|++||||++|+|++++.|..+++++.+.
T Consensus 83 ~~~~-~~~~~~~~~l~~~~---~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 158 (171)
T 2rli_A 83 ARYV-QDFHPRLLGLTGST---KQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDS 158 (171)
T ss_dssp HHHH-HTTCTTCCEEECCH---HHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHH
T ss_pred HHHH-HHcCCCeEEEeCCH---HHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHH
Confidence 9999 58899999885311 00112222221000 000013355667999999999999999998889999999
Q ss_pred HHHHhhc
Q 030845 163 IKNALGD 169 (170)
Q Consensus 163 l~~ll~~ 169 (170)
|++++++
T Consensus 159 l~~ll~~ 165 (171)
T 2rli_A 159 VRRHMAA 165 (171)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998863
No 36
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.97 E-value=8.7e-30 Score=179.64 Aligned_cols=148 Identities=16% Similarity=0.197 Sum_probs=125.9
Q ss_pred CCCCCCcccceEee-cCCCCeeecCccCCc-EEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVK-DSKGKDVDLSIYKGK-VLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPG 82 (170)
Q Consensus 5 ~~~~~~~~p~f~l~-~~~G~~v~l~~~~gk-~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~ 82 (170)
....|..+|+|++. +.+|+.+++++++|| ++||+||++||++|+.+++.|++++++++++++.+++|++|+...++.+
T Consensus 17 ~~~~g~~~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d 96 (196)
T 2ywi_A 17 MFPLGKQAPPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPED 96 (196)
T ss_dssp CCCTTCBCCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGG
T ss_pred CCCcCCcCCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccc
Confidence 35788999999999 999999999999998 5999999999999999999999999999988999999999864444446
Q ss_pred CHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEe---------cCCC
Q 030845 83 TSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGR---------YSPT 153 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~---------~~g~ 153 (170)
+.+.+++|+ ++++++|+++.|. . ..+... +++..+|++||||++|+++++ +.|.
T Consensus 97 ~~~~~~~~~-~~~~~~~~~~~d~--~----~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~ 159 (196)
T 2ywi_A 97 SPENMKKVA-EELGYPFPYLYDE--T----QEVAKA----------YDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIP 159 (196)
T ss_dssp SHHHHHHHH-HHHTCCSCEEECS--S----CHHHHH----------HTCCEESEEEEEETTCBEEEEECSSSCCTTTCCC
T ss_pred CHHHHHHHH-HHcCCCceEEECC--c----hHHHHH----------hCCCCCCeEEEEcCCCeEEEccccCcccccccCc
Confidence 889999999 5889999988642 1 122322 368888999999999999998 4566
Q ss_pred CCchhHHHHHHHHhhc
Q 030845 154 TSPMAIEGDIKNALGD 169 (170)
Q Consensus 154 ~~~~~~~~~l~~ll~~ 169 (170)
.+.+++.+.|++++++
T Consensus 160 ~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 160 VTGESIRAALDALLEG 175 (196)
T ss_dssp CCCHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHcC
Confidence 7888999999998863
No 37
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.96 E-value=1.9e-29 Score=171.50 Aligned_cols=139 Identities=22% Similarity=0.310 Sum_probs=111.4
Q ss_pred CCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 4 SESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
.....+..+|+|++++.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|. .
T Consensus 7 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~-------~ 79 (152)
T 2lrt_A 7 EDKIKEASIIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDG-------D 79 (152)
T ss_dssp CSSSCTTCSCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSC-------C
T ss_pred hhhccCCCCCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccC-------C
Confidence 345678899999999999999999999999999999999999999999999999999998899999999984 4
Q ss_pred HHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHH
Q 030845 84 SQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDI 163 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (170)
.+.++.|. . +++|+++.|.+ +.. ..+... +++..+|++||||++|+|++++.|..+. .+.+
T Consensus 80 ~~~~~~~~-~--~~~~~~~~d~~--~~~-~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~---e~~~ 140 (152)
T 2lrt_A 80 EHFWKTSA-D--NLPWVCVRDAN--GAY-SSYISL----------YNVTNLPSVFLVNRNNELSARGENIKDL---DEAI 140 (152)
T ss_dssp HHHHHHHH-T--TCSSEEEECSS--GGG-CHHHHH----------HTCCSCSEEEEEETTTEEEEETTTCSCH---HHHH
T ss_pred HHHHHHHH-h--CCCceEEECCC--Ccc-hHHHHH----------cCcccCceEEEECCCCeEEEecCCHHHH---HHHH
Confidence 56677776 2 47888886432 221 113333 3688889999999999999999875444 4444
Q ss_pred HHHhh
Q 030845 164 KNALG 168 (170)
Q Consensus 164 ~~ll~ 168 (170)
.++++
T Consensus 141 ~~~~~ 145 (152)
T 2lrt_A 141 KKLLE 145 (152)
T ss_dssp HHHHG
T ss_pred HHHHh
Confidence 44443
No 38
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.96 E-value=3.7e-29 Score=173.20 Aligned_cols=155 Identities=14% Similarity=0.168 Sum_probs=119.2
Q ss_pred CCCCccc-ceEeecCCCCeeecCccCCcEEEEEEecCCCC-CchHhHHHHHHHHHHhcc--CCeEEEEeeCCCCCCCCCC
Q 030845 7 VPQKSIY-EFTVKDSKGKDVDLSIYKGKVLLIVNVASKCG-FTDSNYSQLTDLYNKYKH--KGLEILAFPCNQFLKQEPG 82 (170)
Q Consensus 7 ~~~~~~p-~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~-~C~~~~~~l~~~~~~~~~--~~v~vi~vs~d~~~~~~~~ 82 (170)
..|.++| +|+|+|.+|+++++++++||++||+||++||| .|+.+++.|+++++++++ .++++++||+|+ ++
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~-----~d 76 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDP-----KD 76 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCT-----TC
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCC-----CC
Confidence 4688999 99999999999999999999999999999998 599999999999999975 469999999984 46
Q ss_pred CHHHHHHHHHHhcCCCCceeEEee-cCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCC-CCchhHH
Q 030845 83 TSQEAHEFACTRYKAEYPIFQKVR-VNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPT-TSPMAIE 160 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~-~~~~~~~ 160 (170)
+.+.+++|+ ++++.+++.+...- ........+.+.+.-.... .++++.+.|++||||++|+|+.++.|. .+++++.
T Consensus 77 ~~~~~~~~~-~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~ 154 (170)
T 3me7_A 77 TLEDIKRFQ-KEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMT-AGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFV 154 (170)
T ss_dssp CHHHHHHHH-HHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEE-ETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHH
T ss_pred CHHHHHHHH-HHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEec-CCCccccCceEEEECCCCeEEEEEeCCCCCHHHHH
Confidence 899999999 58898876432110 0111122222221100000 124678889999999999999988774 5678899
Q ss_pred HHHHHHhh
Q 030845 161 GDIKNALG 168 (170)
Q Consensus 161 ~~l~~ll~ 168 (170)
+.|+++..
T Consensus 155 ~~l~~~~~ 162 (170)
T 3me7_A 155 NALRLARG 162 (170)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhhc
Confidence 99988865
No 39
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.96 E-value=3.3e-29 Score=169.93 Aligned_cols=140 Identities=19% Similarity=0.260 Sum_probs=122.5
Q ss_pred CCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHH
Q 030845 7 VPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQE 86 (170)
Q Consensus 7 ~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~ 86 (170)
.+|..+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|+++++++++.++.+++|+.+. ++.+.
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~------~~~~~ 76 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPI------DPIES 76 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTT------SCHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCC------CCHHH
Confidence 468899999999999999999999999999999999999999999999999999998899999999763 57889
Q ss_pred HHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHH
Q 030845 87 AHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNA 166 (170)
Q Consensus 87 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~l 166 (170)
+++|+ ++++++|+++.|.+ ..+... +++..+|+++|||++|+++.++.|..+.+++.+.|+++
T Consensus 77 ~~~~~-~~~~~~~~~~~d~~------~~~~~~----------~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 77 VRQYV-KDYGLPFTVMYDAD------KAVGQA----------FGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTA 139 (153)
T ss_dssp HHHHH-HHTTCCSEEEECSS------CHHHHH----------HTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHH
T ss_pred HHHHH-HHcCCCceEEcCch------HHHHHH----------cCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 99999 68999999876421 223333 37888999999999999999999988899999999999
Q ss_pred hhc
Q 030845 167 LGD 169 (170)
Q Consensus 167 l~~ 169 (170)
+++
T Consensus 140 l~~ 142 (153)
T 2l5o_A 140 WRN 142 (153)
T ss_dssp HHC
T ss_pred HHh
Confidence 864
No 40
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.96 E-value=5.3e-29 Score=172.40 Aligned_cols=145 Identities=12% Similarity=0.129 Sum_probs=112.6
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
...+|..+|+|++.+.+|+.+++++++||++||+|| ++|||+|+.+++.|+++++++ .++++++||.| +
T Consensus 20 ~l~~g~~~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d--------~ 89 (171)
T 2yzh_A 20 ELKVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMD--------L 89 (171)
T ss_dssp CCCTTSBCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------C
T ss_pred cCCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCC--------C
Confidence 457899999999999999999999999999999999 899999999999999999999 67999999986 5
Q ss_pred HHHHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCC-----CCCch
Q 030845 84 SQEAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSP-----TTSPM 157 (170)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g-----~~~~~ 157 (170)
.+.+++|+ +++++ +|+++.|. .. ... ..|....... ... + .++|++||||++|+|++++.| ..+.+
T Consensus 90 ~~~~~~~~-~~~~~~~~~~l~D~-~~-~~~-~~~gv~~~~~-~~~--g-~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~ 161 (171)
T 2yzh_A 90 PFAQKRFC-ESFNIQNVTVASDF-RY-RDM-EKYGVLIGEG-ALK--G-ILARAVFIIDKEGKVAYVQLVPEITEEPNYD 161 (171)
T ss_dssp HHHHHHHH-HHTTCCSSEEEECT-TT-CGG-GGGTCBBCSS-TTT--T-SBCCEEEEECTTSBEEEEEECSBTTSCCCCH
T ss_pred HHHHHHHH-HHcCCCCeEEeecC-cc-CcH-HHhCCEeccc-ccC--C-ceeeEEEEEcCCCeEEEEEeCCCcCCCCCHH
Confidence 78889999 58899 89999751 11 222 3332110000 000 1 136899999999999999854 34457
Q ss_pred hHHHHHHHHh
Q 030845 158 AIEGDIKNAL 167 (170)
Q Consensus 158 ~~~~~l~~ll 167 (170)
++.+.|++||
T Consensus 162 ~ll~~l~~ll 171 (171)
T 2yzh_A 162 EVVNKVKELI 171 (171)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhhC
Confidence 7888887764
No 41
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.96 E-value=4.1e-29 Score=170.89 Aligned_cols=129 Identities=17% Similarity=0.209 Sum_probs=108.6
Q ss_pred CCCCCcccceEeecCCCCeeecCccCCc-EEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 6 SVPQKSIYEFTVKDSKGKDVDLSIYKGK-VLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~v~l~~~~gk-~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
..+|..+|+|++.+.+|+.+++++++|| ++||+|| ++||++|+.+++.|+++++++++.++.+++|++| +
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d--------~ 80 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVG--------P 80 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESC--------C
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCC--------C
Confidence 5789999999999999999999999998 9999998 9999999999999999999999889999999986 5
Q ss_pred HHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccc----cCc--eEEEECCCCcEEEecCCCCCch
Q 030845 84 SQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIK----WNF--TKFLVDTEGNVIGRYSPTTSPM 157 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~----~~p--~~~lid~~G~i~~~~~g~~~~~ 157 (170)
.+.+++|+ ++++++|+++.|.... ..+... +++. .+| ++||||++|+|++++.|..+.+
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~d~~~~----~~~~~~----------~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~ 145 (160)
T 1xvw_A 81 PPTHKIWA-TQSGFTFPLLSDFWPH----GAVSQA----------YGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEV 145 (160)
T ss_dssp HHHHHHHH-HHHTCCSCEEECTTTT----THHHHH----------TTCEETTTTEECSEEEEECTTSBEEEEEECCTTCC
T ss_pred HHHHHHHH-HhcCCCceEEecCCcC----hHHHHH----------cCCccccCCCeeeeEEEECCCCeEEEEEecCCCCC
Confidence 78999999 5889999988642111 222333 2454 567 9999999999999998865443
No 42
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.96 E-value=1.2e-29 Score=177.03 Aligned_cols=148 Identities=12% Similarity=0.189 Sum_probs=112.1
Q ss_pred CCCCCCc----ccceEeecCCCCeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCC
Q 030845 5 ESVPQKS----IYEFTVKDSKGKDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQ 79 (170)
Q Consensus 5 ~~~~~~~----~p~f~l~~~~G~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~ 79 (170)
...+|.. +|+|+|++.+|+++++++++||++||+|| ++||++|+.+++.|++++++|+++|+.+++|+.|
T Consensus 20 ~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D----- 94 (179)
T 3ixr_A 20 HMNIGDTLNHSLLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD----- 94 (179)
T ss_dssp SSCTTCBCCHHHHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC-----
T ss_pred ccCcCcccCCcCCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC-----
Confidence 3467777 99999999999999999999999999998 9999999999999999999999999999999986
Q ss_pred CCCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcC-CccC-cccccCceEEEECCCCcEEEecCCCCCc-
Q 030845 80 EPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKT-GYFG-SRIKWNFTKFLVDTEGNVIGRYSPTTSP- 156 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~-~~v~~~p~~~lid~~G~i~~~~~g~~~~- 156 (170)
+.+.+++|+ ++++++||++.|.+ + .+...+..... ...+ .....+|++||||++|+|++++.+....
T Consensus 95 ---~~~~~~~~~-~~~~~~f~~l~D~~--~----~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~ 164 (179)
T 3ixr_A 95 ---SVKSHDSFC-AKQGFTFPLVSDSD--A----ILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPG 164 (179)
T ss_dssp ---CHHHHHHHH-HHHTCCSCEEECTT--C----HHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTT
T ss_pred ---CHHHHHHHH-HHcCCceEEEECCc--h----HHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCC
Confidence 688899999 58899999997522 2 22222211000 0000 1112468999999999999998553322
Q ss_pred --hhHHHHHHHHh
Q 030845 157 --MAIEGDIKNAL 167 (170)
Q Consensus 157 --~~~~~~l~~ll 167 (170)
+++.+.|+++.
T Consensus 165 ~~~~il~~l~~l~ 177 (179)
T 3ixr_A 165 HAEEVLNKLKAHA 177 (179)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 34555555544
No 43
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.96 E-value=4e-28 Score=164.35 Aligned_cols=138 Identities=25% Similarity=0.330 Sum_probs=119.3
Q ss_pred CCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHH
Q 030845 6 SVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQ 85 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~ 85 (170)
..+|..+|+|++.+ +|+.+++++++||++||+||++||++|..+++.|.++++++++.++.+++|++|. ..+
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~~~ 74 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDA-------KTG 74 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCS-------SHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCC-------CHH
Confidence 57899999999999 9999999999999999999999999999999999999999999899999999885 578
Q ss_pred HHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCc--hhHHHHH
Q 030845 86 EAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSP--MAIEGDI 163 (170)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~--~~~~~~l 163 (170)
.+++|+ ++++.+|+++.|. .+ .+... +++..+|++||||++|++++++.|..+. +++.+.|
T Consensus 75 ~~~~~~-~~~~~~~~~~~d~--~~----~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i 137 (152)
T 3gl3_A 75 DAMKFL-AQVPAEFTVAFDP--KG----QTPRL----------YGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQI 137 (152)
T ss_dssp HHHHHH-HHSCCCSEEEECT--TC----HHHHH----------TTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHH
T ss_pred HHHHHH-HHcCCCCceeECC--cc----hhHHH----------cCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHH
Confidence 889998 5889999988642 21 23333 4788899999999999999999886544 6788888
Q ss_pred HHHhh
Q 030845 164 KNALG 168 (170)
Q Consensus 164 ~~ll~ 168 (170)
++++.
T Consensus 138 ~~~~~ 142 (152)
T 3gl3_A 138 LAALG 142 (152)
T ss_dssp HHHTC
T ss_pred HHHHc
Confidence 87764
No 44
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.96 E-value=3.6e-29 Score=175.18 Aligned_cols=145 Identities=21% Similarity=0.267 Sum_probs=119.0
Q ss_pred CCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHH
Q 030845 6 SVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQ 85 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~ 85 (170)
..+|..+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|+++++++++.++.+++|++|. ++.+
T Consensus 34 ~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~------~~~~ 107 (186)
T 1jfu_A 34 ASAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDT------RDPE 107 (186)
T ss_dssp CCSCCBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCC------SCTT
T ss_pred ccCCCcCCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCC------CCHH
Confidence 4678899999999999999999999999999999999999999999999999999998889999999873 3456
Q ss_pred HHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCC--chhHHHH
Q 030845 86 EAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTS--PMAIEGD 162 (170)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~--~~~~~~~ 162 (170)
.+++|+ +++++ .|+++.|. . ..++..+... +....+|++||||++|+|++++.|..+ .+++.+.
T Consensus 108 ~~~~~~-~~~~~~~~~~~~d~--~----~~~~~~~~~~------~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~ 174 (186)
T 1jfu_A 108 KPKTFL-KEANLTRLGYFNDQ--K----AKVFQDLKAI------GRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKL 174 (186)
T ss_dssp HHHHHH-HHTTCCTTCCEECT--T----CHHHHHHHTT------TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHH
T ss_pred HHHHHH-HHcCCCCCceEECC--c----chHHHHhccc------cccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHH
Confidence 788998 58888 59988642 2 2334433211 122367999999999999999988654 6789999
Q ss_pred HHHHhhc
Q 030845 163 IKNALGD 169 (170)
Q Consensus 163 l~~ll~~ 169 (170)
|++++++
T Consensus 175 l~~ll~~ 181 (186)
T 1jfu_A 175 IRAATGK 181 (186)
T ss_dssp HHHHHC-
T ss_pred HHHHhcc
Confidence 9998764
No 45
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.96 E-value=2e-28 Score=171.80 Aligned_cols=137 Identities=14% Similarity=0.177 Sum_probs=116.6
Q ss_pred CCCCcccceEeecCCCC----eeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCC
Q 030845 7 VPQKSIYEFTVKDSKGK----DVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEP 81 (170)
Q Consensus 7 ~~~~~~p~f~l~~~~G~----~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~ 81 (170)
..|..+|+|+|.+.+|. .+++++++||++||+|| ++||++|+.+++.|++++++++++++.+++|++|
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d------- 74 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTD------- 74 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESS-------
T ss_pred CCCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECC-------
Confidence 56889999999999999 99999999999999999 9999999999999999999999889999999987
Q ss_pred CCHHHHHHHHHHhc----CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccc------cCceEEEECCCCcEEEecC
Q 030845 82 GTSQEAHEFACTRY----KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIK------WNFTKFLVDTEGNVIGRYS 151 (170)
Q Consensus 82 ~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~------~~p~~~lid~~G~i~~~~~ 151 (170)
+.+.+++|+ +++ +++|+++.|. . ..+... +++. ++|++||||++|+|++++.
T Consensus 75 -~~~~~~~~~-~~~~~~~~~~~~~~~d~--~----~~~~~~----------~~v~~~~~g~~~P~~~lid~~G~i~~~~~ 136 (187)
T 1we0_A 75 -THFVHKAWH-ENSPAVGSIEYIMIGDP--S----QTISRQ----------FDVLNEETGLADRGTFIIDPDGVIQAIEI 136 (187)
T ss_dssp -CHHHHHHHH-HSCHHHHTCCSEEEECT--T----CHHHHH----------TTCEETTTTEECEEEEEECTTSBEEEEEE
T ss_pred -CHHHHHHHH-HHhccccCCCceEEECC--c----hHHHHH----------hCCCcCCCCceeeEEEEECCCCeEEEEEe
Confidence 577888998 466 7899988652 1 223333 3555 7899999999999999987
Q ss_pred CCC----CchhHHHHHHHHhh
Q 030845 152 PTT----SPMAIEGDIKNALG 168 (170)
Q Consensus 152 g~~----~~~~~~~~l~~ll~ 168 (170)
|.. +.+++.+.|+++..
T Consensus 137 g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 137 NADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp ECTTSCCCTTHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHhh
Confidence 754 57788888888764
No 46
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.96 E-value=7.1e-29 Score=178.45 Aligned_cols=137 Identities=15% Similarity=0.215 Sum_probs=113.3
Q ss_pred CCCCCcccceEeecC--CC--CeeecCcc-CCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCC
Q 030845 6 SVPQKSIYEFTVKDS--KG--KDVDLSIY-KGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQ 79 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~--~G--~~v~l~~~-~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~ 79 (170)
...|..+|+|++++. +| +.++++++ +||++||+|| ++|||+|+.+++.|++++++|+++++.+|+||+|
T Consensus 25 l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D----- 99 (221)
T 2c0d_A 25 SLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVD----- 99 (221)
T ss_dssp -CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESS-----
T ss_pred CCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCC-----
Confidence 568999999999998 99 99999999 9999999999 9999999999999999999999889999999986
Q ss_pred CCCCHHHHHHHHHHhc-------CCCCceeEEeecCCCCCchHHHHHhhhcCCccCccc-----ccCceEEEECCCCcEE
Q 030845 80 EPGTSQEAHEFACTRY-------KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRI-----KWNFTKFLVDTEGNVI 147 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v-----~~~p~~~lid~~G~i~ 147 (170)
+.+.+++|+ +++ +++||++.|. . ..+.+. +++ ..+|++||||++|+|+
T Consensus 100 ---~~~~~~~~~-~~~~~~~g~~~~~fp~l~D~--~----~~~~~~----------ygv~~~~g~~~P~~~lID~~G~I~ 159 (221)
T 2c0d_A 100 ---SVYSHLAWK-NMPIEKGGIGNVEFTLVSDI--N----KDISKN----------YNVLYDNSFALRGLFIIDKNGCVR 159 (221)
T ss_dssp ---CHHHHHHHH-HSCGGGTCCCSCSSEEEECT--T----SHHHHH----------TTCEETTTEECEEEEEECTTSBEE
T ss_pred ---CHHHHHHHH-HHhhhhcCccCCceEEEECC--c----hHHHHH----------cCCcccCCCccceEEEECCCCeEE
Confidence 677889998 466 7789988652 1 122222 234 3579999999999999
Q ss_pred EecCCC----CCchhHHHHHHHHh
Q 030845 148 GRYSPT----TSPMAIEGDIKNAL 167 (170)
Q Consensus 148 ~~~~g~----~~~~~~~~~l~~ll 167 (170)
+++.|. .+.+++.+.|+++.
T Consensus 160 ~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 160 HQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHHh
Confidence 998653 34567888887765
No 47
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.96 E-value=2e-28 Score=166.19 Aligned_cols=139 Identities=17% Similarity=0.257 Sum_probs=118.2
Q ss_pred CCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHH
Q 030845 7 VPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQE 86 (170)
Q Consensus 7 ~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~ 86 (170)
.+|.++|+|++.+.+|+.+++++++||++||+||++||++|..+++.|.++++++++.++.+++|++|. ++.+.
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~------~~~~~ 76 (154)
T 3kcm_A 3 LEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDE------GGKVA 76 (154)
T ss_dssp CTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCT------THHHH
T ss_pred CCCCCCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCC------cchHH
Confidence 678999999999999999999999999999999999999999999999999999998889999999874 24788
Q ss_pred HHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCC--CchhHHHHHH
Q 030845 87 AHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTT--SPMAIEGDIK 164 (170)
Q Consensus 87 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~--~~~~~~~~l~ 164 (170)
+++|+ ++++++|+++.|. . ..+... +++..+|++||||++|++++++.|.. +.+++.+.|+
T Consensus 77 ~~~~~-~~~~~~~~~~~d~--~----~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~ 139 (154)
T 3kcm_A 77 VEEFF-RKTGFTLPVLLDA--D----KRVGKL----------YGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLN 139 (154)
T ss_dssp HHHHH-HHHCCCCCEEECT--T----CHHHHH----------HTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred HHHHH-HHcCCCeeEEecC--c----hHHHHH----------hCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHH
Confidence 89998 5889999998642 1 223333 37888999999999999999988865 5567888888
Q ss_pred HHhh
Q 030845 165 NALG 168 (170)
Q Consensus 165 ~ll~ 168 (170)
++..
T Consensus 140 ~l~~ 143 (154)
T 3kcm_A 140 NELS 143 (154)
T ss_dssp TC--
T ss_pred HHHH
Confidence 7754
No 48
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.96 E-value=8e-28 Score=162.89 Aligned_cols=141 Identities=20% Similarity=0.264 Sum_probs=120.3
Q ss_pred CCCCCCccc-ceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 5 ESVPQKSIY-EFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 5 ~~~~~~~~p-~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
...+|.++| +|++.+.+|+.+++++++||++||+||++||++|..+++.|.++++++++.++.+++|++|. .
T Consensus 2 ~l~~G~~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~ 74 (152)
T 2lja_A 2 SLRSGNPSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDK-------N 74 (152)
T ss_dssp CTTTTCCCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCS-------C
T ss_pred ccccCCCCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccC-------c
Confidence 356889999 99999999999999999999999999999999999999999999999998889999999884 5
Q ss_pred HHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHH
Q 030845 84 SQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDI 163 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (170)
.+.+++|+ ++++++++.+.. +. ...+.+. +++..+|+++|+|++|++++++.|..+.+++.+.|
T Consensus 75 ~~~~~~~~-~~~~~~~~~~~~-d~----~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 138 (152)
T 2lja_A 75 KKAWENMV-TKDQLKGIQLHM-GT----DRTFMDA----------YLINGIPRFILLDRDGKIISANMTRPSDPKTAEKF 138 (152)
T ss_dssp HHHHHHHH-HHHTCCSEEEEC-SS----CTHHHHH----------TTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHH
T ss_pred HHHHHHHH-HhcCCCCceeec-Cc----chhHHHH----------cCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHH
Confidence 67889998 577888754421 11 2223333 47888999999999999999999988899999999
Q ss_pred HHHhh
Q 030845 164 KNALG 168 (170)
Q Consensus 164 ~~ll~ 168 (170)
++++.
T Consensus 139 ~~~~~ 143 (152)
T 2lja_A 139 NELLG 143 (152)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 98864
No 49
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.96 E-value=1.2e-28 Score=174.97 Aligned_cols=142 Identities=18% Similarity=0.177 Sum_probs=116.6
Q ss_pred CCCCCCCCCCcccceEeecC--CC--CeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCC
Q 030845 1 MGASESVPQKSIYEFTVKDS--KG--KDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQ 75 (170)
Q Consensus 1 ~~~~~~~~~~~~p~f~l~~~--~G--~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~ 75 (170)
|.......|..+|+|++.+. +| +.+++++++||++||+|| ++||++|+.+++.|.+++++|+++++.+++||+|
T Consensus 1 m~~~~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D- 79 (202)
T 1uul_A 1 MSCGEAEDLHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMD- 79 (202)
T ss_dssp ---CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-
T ss_pred CCcccccCCCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-
Confidence 56677889999999999997 78 899999999999999999 9999999999999999999999889999999987
Q ss_pred CCCCCCCCHHHHHHHHHHhc-------CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccc------cCceEEEECC
Q 030845 76 FLKQEPGTSQEAHEFACTRY-------KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIK------WNFTKFLVDT 142 (170)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~------~~p~~~lid~ 142 (170)
+.+..++|+ +++ +++||++.|. . ..+.+. +++. .+|++||||+
T Consensus 80 -------~~~~~~~~~-~~~~~~~~~~~~~~p~l~D~--~----~~~~~~----------ygv~~~~~g~~~P~~~lid~ 135 (202)
T 1uul_A 80 -------SEYSHLAWT-SIERKRGGLGQMNIPILADK--T----KCIMKS----------YGVLKEEDGVAYRGLFIIDP 135 (202)
T ss_dssp -------CHHHHHHHH-HSCGGGTCCCSCSSCEEECT--T----CHHHHH----------HTCEETTTTEECEEEEEECT
T ss_pred -------CHHHHHHHH-HHHHhhCCCCCCceeEEECC--c----hHHHHH----------cCCccCCCCceeeEEEEECC
Confidence 577888998 466 7899998752 1 223333 2455 7899999999
Q ss_pred CCcEEEecCCCCC----chhHHHHHHHHh
Q 030845 143 EGNVIGRYSPTTS----PMAIEGDIKNAL 167 (170)
Q Consensus 143 ~G~i~~~~~g~~~----~~~~~~~l~~ll 167 (170)
+|+|++++.|..+ .+++.+.|+++.
T Consensus 136 ~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 136 KQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 9999999866443 367888887765
No 50
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.96 E-value=2.6e-30 Score=178.53 Aligned_cols=150 Identities=17% Similarity=0.257 Sum_probs=118.8
Q ss_pred CCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCC-chHhHHHHHHHHHHhccC---CeEEEEeeCCCCCCCCCCC
Q 030845 8 PQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGF-TDSNYSQLTDLYNKYKHK---GLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 8 ~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~-C~~~~~~l~~~~~~~~~~---~v~vi~vs~d~~~~~~~~~ 83 (170)
.|..+|+|++.+.+| .+++++++||++||+||++||++ |+.+++.|++++++++++ ++.+++|++|+ ++++
T Consensus 12 ~G~~~p~f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~----~~d~ 86 (172)
T 2k6v_A 12 LNPKPVDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDP----ERDP 86 (172)
T ss_dssp EEEEECCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCT----TTCC
T ss_pred cCCCCCCeEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECC----CCCC
Confidence 577899999999999 99999999999999999999998 999999999999999875 69999999975 3567
Q ss_pred HHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCC-----ccCcccccCceEEEECCCCcEEEecCCCC--Cc
Q 030845 84 SQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTG-----YFGSRIKWNFTKFLVDTEGNVIGRYSPTT--SP 156 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~p~~~lid~~G~i~~~~~g~~--~~ 156 (170)
.+.+++|+ ++++.+|+++.|.+. ....+.+.+...... ...+++.++|++|||| +|+|++++.|.. ++
T Consensus 87 ~~~~~~~~-~~~~~~~~~l~d~~~---~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~ 161 (172)
T 2k6v_A 87 PEVADRYA-KAFHPSFLGLSGSPE---AVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEAT 161 (172)
T ss_dssp HHHHHHHH-HHHCTTEEEECCCHH---HHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCH
T ss_pred HHHHHHHH-HHhCCCcEEEeCCHH---HHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCH
Confidence 89999999 588999998864221 012222222210000 0114678899999999 999999998876 77
Q ss_pred hhHHHHHHHHh
Q 030845 157 MAIEGDIKNAL 167 (170)
Q Consensus 157 ~~~~~~l~~ll 167 (170)
+++.+.|+++|
T Consensus 162 ~~l~~~l~~ll 172 (172)
T 2k6v_A 162 DRVVADLQALL 172 (172)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHhC
Confidence 88888888764
No 51
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.96 E-value=6e-29 Score=174.49 Aligned_cols=136 Identities=15% Similarity=0.195 Sum_probs=112.4
Q ss_pred CCCCcccceEeecC-CC--CeeecCccCCcEEEEEEec-CCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCC
Q 030845 7 VPQKSIYEFTVKDS-KG--KDVDLSIYKGKVLLIVNVA-SKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPG 82 (170)
Q Consensus 7 ~~~~~~p~f~l~~~-~G--~~v~l~~~~gk~~ll~f~~-~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~ 82 (170)
..|..+|+|+|++. +| +.+++++++||++||+||+ +|||+|+.+++.|++++++|+++++++++||.|
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d-------- 73 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTD-------- 73 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESS--------
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECC--------
Confidence 56889999999999 59 8999999999999999995 899999999999999999999889999999986
Q ss_pred CHHHHHHHHHHhc----CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccc------cCceEEEECCCCcEEEecCC
Q 030845 83 TSQEAHEFACTRY----KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIK------WNFTKFLVDTEGNVIGRYSP 152 (170)
Q Consensus 83 ~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~------~~p~~~lid~~G~i~~~~~g 152 (170)
+.+.+++|+ +++ +++||++.|. .+ .+.+. +++. .+|++||||++|+|++++.|
T Consensus 74 ~~~~~~~~~-~~~~~~~~~~fp~l~D~--~~----~~~~~----------ygv~~~~~g~~~p~~~lID~~G~i~~~~~~ 136 (186)
T 1n8j_A 74 THFTHKAWH-SSSETIAKIKYAMIGDP--TG----ALTRN----------FDNMREDEGLADRATFVVDPQGIIQAIEVT 136 (186)
T ss_dssp CHHHHHHHH-HHCTTGGGCCSEEEECT--TS----HHHHH----------TTCEETTTTEECEEEEEECTTSBEEEEEEE
T ss_pred CHHHHHHHH-HHcCcccCCceeEEECC--ch----HHHHH----------hCCccCCCCceeeEEEEECCCCeEEEEEec
Confidence 578889998 577 8899998752 21 22222 2333 46999999999999999876
Q ss_pred CC----CchhHHHHHHHHh
Q 030845 153 TT----SPMAIEGDIKNAL 167 (170)
Q Consensus 153 ~~----~~~~~~~~l~~ll 167 (170)
.. +.+++.+.|+++.
T Consensus 137 ~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 137 AEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp CTTBCCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHH
Confidence 43 3567888887765
No 52
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.96 E-value=2.5e-28 Score=172.39 Aligned_cols=139 Identities=7% Similarity=0.105 Sum_probs=117.2
Q ss_pred CCCCCCcccceEeecCC-------------C--CeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEE
Q 030845 5 ESVPQKSIYEFTVKDSK-------------G--KDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEI 68 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~-------------G--~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~v 68 (170)
...+|..+|+|++.+.+ | +.+++++++||++||+|| ++||++|+.+++.|.+++++++++++.+
T Consensus 3 ~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~v 82 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQI 82 (195)
T ss_dssp BCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEE
T ss_pred cCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEE
Confidence 46789999999999988 7 899999999999999999 9999999999999999999999889999
Q ss_pred EEeeCCCCCCCCCCCHHHHHHHHHHhc----CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccc-----cCceEEE
Q 030845 69 LAFPCNQFLKQEPGTSQEAHEFACTRY----KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIK-----WNFTKFL 139 (170)
Q Consensus 69 i~vs~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~p~~~l 139 (170)
++|++| +.+.+++|+ +++ +++|+++.|. . ..+... +++. ++|++||
T Consensus 83 v~Vs~d--------~~~~~~~~~-~~~~~~~~~~~~~~~d~--~----~~~~~~----------~~v~~~~g~~~P~~~l 137 (195)
T 2bmx_A 83 LGVSID--------SEFAHFQWR-AQHNDLKTLPFPMLSDI--K----RELSQA----------AGVLNADGVADRVTFI 137 (195)
T ss_dssp EEEESS--------CHHHHHHHH-HHCTTGGGCCSCEEECT--T----SHHHHH----------HTCBCTTSSBCEEEEE
T ss_pred EEEECC--------CHHHHHHHH-HHhccccCCceeEEeCC--c----hHHHHH----------hCCcccCCCccceEEE
Confidence 999987 578889998 476 8899988652 1 223333 2565 7899999
Q ss_pred ECCCCcEEEecCCCC----CchhHHHHHHHHhh
Q 030845 140 VDTEGNVIGRYSPTT----SPMAIEGDIKNALG 168 (170)
Q Consensus 140 id~~G~i~~~~~g~~----~~~~~~~~l~~ll~ 168 (170)
||++|+|++++.|.. +.+++.+.|++++.
T Consensus 138 id~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 138 VDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp ECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred EcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 999999999987754 56778888887753
No 53
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.96 E-value=1.8e-28 Score=170.61 Aligned_cols=137 Identities=14% Similarity=0.179 Sum_probs=117.2
Q ss_pred CCCCCCcccceEeecCCC--CeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDSKG--KDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPG 82 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G--~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~ 82 (170)
...+|..+|+|++.+.+| +.+++++++||++||+||++||++|..+++.|++++++ ++.+++|+++.
T Consensus 29 ~~~~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d------- 97 (176)
T 3kh7_A 29 SALIGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKD------- 97 (176)
T ss_dssp TTTTTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESC-------
T ss_pred ccccCCcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCC-------
Confidence 356899999999999999 88999999999999999999999999999999999886 69999999763
Q ss_pred CHHHHHHHHHHhcCCCCce-eEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHH
Q 030845 83 TSQEAHEFACTRYKAEYPI-FQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEG 161 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~ 161 (170)
+.+.+++|+ ++++++|+. +.| ..+ .+... +++..+|++||||++|+|++++.|..+.+++.+
T Consensus 98 ~~~~~~~~~-~~~~~~~~~~~~d--~~~----~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~ 160 (176)
T 3kh7_A 98 DNAAAIKWL-NELHNPYLLSISD--ADG----TLGLD----------LGVYGAPETYLIDKQGIIRHKIVGVVDQKVWRE 160 (176)
T ss_dssp CHHHHHHHH-HHTTCCCSEEEEE--TTC----HHHHH----------HTCCSSCEEEEECTTCBEEEEEESCCCHHHHHH
T ss_pred CHHHHHHHH-HHcCCCCceEEEC--Ccc----hHHHH----------cCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHH
Confidence 789999999 588999985 433 222 22222 378888999999999999999999888999999
Q ss_pred HHHHHhhc
Q 030845 162 DIKNALGD 169 (170)
Q Consensus 162 ~l~~ll~~ 169 (170)
.|++++++
T Consensus 161 ~l~~~l~~ 168 (176)
T 3kh7_A 161 QLAPLYQQ 168 (176)
T ss_dssp HTHHHHHH
T ss_pred HHHHHHHH
Confidence 88888764
No 54
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.96 E-value=1e-28 Score=175.20 Aligned_cols=155 Identities=14% Similarity=0.107 Sum_probs=117.2
Q ss_pred CCCCc--ccceEeecCCCCeeecCccCCcEEEEEEecCCCCC-chHhHHHHHHHHHHhcc---CCeEEEEeeCCCCCCCC
Q 030845 7 VPQKS--IYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGF-TDSNYSQLTDLYNKYKH---KGLEILAFPCNQFLKQE 80 (170)
Q Consensus 7 ~~~~~--~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~-C~~~~~~l~~~~~~~~~---~~v~vi~vs~d~~~~~~ 80 (170)
..|.+ +|+|+|.+.+|+.+++++++||++||+||++||++ |+.+++.|+++++++++ .++.+++||+|+ +
T Consensus 14 ~~g~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~----~ 89 (200)
T 2b7k_A 14 GYGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP----A 89 (200)
T ss_dssp --CCCCCCCCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT----T
T ss_pred ccCCCCcCCCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC----C
Confidence 34555 49999999999999999999999999999999998 99999999999999974 379999999984 3
Q ss_pred CCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhh--cC----CccCcccccCceEEEECCCCcEEEecCCCC
Q 030845 81 PGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKAS--KT----GYFGSRIKWNFTKFLVDTEGNVIGRYSPTT 154 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~----~~~~~~v~~~p~~~lid~~G~i~~~~~g~~ 154 (170)
.++.+.+++|+ ++++.+|+.+.+.. .....+.+.+... .. ....+.+.|.|++||||++|+|++++.|..
T Consensus 90 ~d~~~~~~~~~-~~~~~~~~~l~~~~---d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~ 165 (200)
T 2b7k_A 90 RDSPAVLKEYL-SDFHPSILGLTGTF---DEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNY 165 (200)
T ss_dssp TCCHHHHHHHH-TTSCTTCEEEECCH---HHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTC
T ss_pred CCCHHHHHHHH-HHcCCCceEEeCCH---HHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCC
Confidence 46789999999 58888888774211 0011122222111 00 001134567789999999999999998888
Q ss_pred CchhHHHHHHHHhhc
Q 030845 155 SPMAIEGDIKNALGD 169 (170)
Q Consensus 155 ~~~~~~~~l~~ll~~ 169 (170)
+++++.+.|.++++.
T Consensus 166 ~~~~~~~~i~~~l~~ 180 (200)
T 2b7k_A 166 DEKTGVDKIVEHVKS 180 (200)
T ss_dssp CTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 888888888888764
No 55
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.96 E-value=2.2e-28 Score=168.05 Aligned_cols=141 Identities=9% Similarity=0.097 Sum_probs=108.2
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEec-CCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVA-SKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~-~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
...+|..+|+|++++.+|+++++++++||++||+||+ +||++|+.+++.|+++++++ .++.+++||.| +
T Consensus 15 ~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d--------~ 84 (163)
T 1psq_A 15 QLQVGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMD--------L 84 (163)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------C
T ss_pred CCCCCCCCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECC--------C
Confidence 3568899999999999999999999999999999995 89999999999999999999 67999999986 5
Q ss_pred HHHHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCC---CCc--h
Q 030845 84 SQEAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPT---TSP--M 157 (170)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~---~~~--~ 157 (170)
.+.+++|+ +++++ +||++.|. .. ..+...+...... .++ ..|++||||++|+|++++.|. ..+ +
T Consensus 85 ~~~~~~~~-~~~~~~~~~~l~D~-~~----~~~~~~~gv~~~~---~g~-~~p~~~liD~~G~i~~~~~g~~~~~~~~~~ 154 (163)
T 1psq_A 85 PFAQKRWC-GAEGLDNAIMLSDY-FD----HSFGRDYALLINE---WHL-LARAVFVLDTDNTIRYVEYVDNINSEPNFE 154 (163)
T ss_dssp HHHHHHHH-HHHTCTTSEEEECT-TT----CHHHHHHTCBCTT---TCS-BCCEEEEECTTCBEEEEEECSBTTSCCCHH
T ss_pred HHHHHHHH-HhcCCCCcEEecCC-ch----hHHHHHhCCcccc---CCc-eEEEEEEEcCCCeEEEEEecCCcCCCCCHH
Confidence 78889999 57899 99988651 11 1233332210000 011 258999999999999998653 122 4
Q ss_pred hHHHHHHH
Q 030845 158 AIEGDIKN 165 (170)
Q Consensus 158 ~~~~~l~~ 165 (170)
++.+.|++
T Consensus 155 ~~l~~l~~ 162 (163)
T 1psq_A 155 AAIAAAKA 162 (163)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55555554
No 56
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.96 E-value=5.2e-28 Score=162.17 Aligned_cols=137 Identities=17% Similarity=0.215 Sum_probs=115.7
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCH
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTS 84 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~ 84 (170)
....|..+|+|++.+.+|+.+++++ +||++||+||++||++|+.+++.|.++++++++.++.+++|++|. ..++.
T Consensus 8 ~~~~g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~----~~~~~ 82 (145)
T 3erw_A 8 EEKQPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN----SEQNQ 82 (145)
T ss_dssp ----CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGG----GSSCH
T ss_pred cccCCCcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccC----CcCCH
Confidence 4578899999999999999999999 999999999999999999999999999999997789999999874 23478
Q ss_pred HHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHH
Q 030845 85 QEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDI 163 (170)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (170)
+.+++|+ ++++++|+++.|.. ..+... +++..+|+++|+|++|+++.++.|..+.+++.+.|
T Consensus 83 ~~~~~~~-~~~~~~~~~~~d~~------~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 83 QVVEDFI-KANKLTFPIVLDSK------GELMKE----------YHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HHHHHHH-HHTTCCSCEEECSS------SHHHHH----------TTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHH-HHcCCceeEEEcCc------hhHHHh----------cCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 8999999 58899999886421 223333 47888999999999999999999988888777665
No 57
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.96 E-value=4.4e-28 Score=163.05 Aligned_cols=143 Identities=15% Similarity=0.184 Sum_probs=122.7
Q ss_pred CCCCcccceEe--ecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCH
Q 030845 7 VPQKSIYEFTV--KDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTS 84 (170)
Q Consensus 7 ~~~~~~p~f~l--~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~ 84 (170)
..|..+|+|++ .+.+|+.+++++++||++||+||++||++|..+++.|++++++++++ +.+++|++|.. .+..+.
T Consensus 2 ~~g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~--~~~~~~ 78 (148)
T 2b5x_A 2 KLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRS--EDDLDP 78 (148)
T ss_dssp CTTCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCS--TTTSSH
T ss_pred CCCCCCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCC--ccccCH
Confidence 57889999999 78999999999999999999999999999999999999999999887 99999998852 223368
Q ss_pred HHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHH
Q 030845 85 QEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIK 164 (170)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~ 164 (170)
+.+++|+ ++++++||++.|.. ..+.+. +++..+|+++|+|++|+++.++.|..+.+++.+.|+
T Consensus 79 ~~~~~~~-~~~~~~~~~~~d~~------~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 141 (148)
T 2b5x_A 79 GKIKETA-AEHDITQPIFVDSD------HALTDA----------FENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVN 141 (148)
T ss_dssp HHHHHHH-HHTTCCSCEEECSS------CHHHHH----------TCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHH
T ss_pred HHHHHHH-HHcCCCcceEECCc------hhHHHH----------hCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHH
Confidence 8999999 58899999885421 123333 478889999999999999999999888899999999
Q ss_pred HHhhc
Q 030845 165 NALGD 169 (170)
Q Consensus 165 ~ll~~ 169 (170)
+++++
T Consensus 142 ~~l~~ 146 (148)
T 2b5x_A 142 RVLAE 146 (148)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99864
No 58
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.96 E-value=2e-28 Score=186.56 Aligned_cols=146 Identities=18% Similarity=0.233 Sum_probs=125.8
Q ss_pred CCCCCCcccceE-----eecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCC
Q 030845 5 ESVPQKSIYEFT-----VKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQ 79 (170)
Q Consensus 5 ~~~~~~~~p~f~-----l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~ 79 (170)
....|..+|+|+ |.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|.+.
T Consensus 50 ~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~-- 127 (352)
T 2hyx_A 50 QLESCGTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYA-- 127 (352)
T ss_dssp SCCCCCBCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSG--
T ss_pred ccCCCCcCCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCccc--
Confidence 457889999999 9999999999999999999999999999999999999999999999889999999987421
Q ss_pred CCCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhH
Q 030845 80 EPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAI 159 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~ 159 (170)
..++.+.+++|+ ++++++||++.|.+ ..++.. +++..+|++||||++|+|+.++.|..+.+++
T Consensus 128 ~~d~~~~~~~~~-~~~~l~fpv~~D~~------~~l~~~----------ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l 190 (352)
T 2hyx_A 128 FEKVPGNVAKGA-ANLGISYPIALDNN------YATWTN----------YRNRYWPAEYLIDATGTVRHIKFGEGDYNVT 190 (352)
T ss_dssp GGGCHHHHHHHH-HHHTCCSCEEECTT------SHHHHH----------TTCCEESEEEEECTTSBEEEEEESBCCHHHH
T ss_pred ccCCHHHHHHHH-HHcCCCccEEeCCc------HHHHHH----------cCCCccCEEEEEeCCCeEEEEEcCCCCHHHH
Confidence 124688999999 58899999886421 233333 4788899999999999999999998888999
Q ss_pred HHHHHHHhhc
Q 030845 160 EGDIKNALGD 169 (170)
Q Consensus 160 ~~~l~~ll~~ 169 (170)
.+.|++++++
T Consensus 191 ~~~I~~lL~e 200 (352)
T 2hyx_A 191 ETLVRQLLND 200 (352)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998853
No 59
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.96 E-value=3e-28 Score=167.88 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=101.7
Q ss_pred CCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCC
Q 030845 4 SESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPG 82 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~ 82 (170)
....+|.++|+|+|++.+|+.+++++++||++||+|| ++||++|+.+++.|++++++ .++.+++||.|
T Consensus 18 ~~l~~G~~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d-------- 86 (166)
T 3p7x_A 18 QQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISAD-------- 86 (166)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESS--------
T ss_pred ccCCCCCCCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECC--------
Confidence 3467899999999999999999999999999999999 78999999999999999988 67999999976
Q ss_pred CHHHHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccc------cCceEEEECCCCcEEEecCC
Q 030845 83 TSQEAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIK------WNFTKFLVDTEGNVIGRYSP 152 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~------~~p~~~lid~~G~i~~~~~g 152 (170)
+.+.+++|+ +++++ +||++.|. ... .+...+ ++. +.|++||||++|+|++++.+
T Consensus 87 ~~~~~~~~~-~~~~~~~~~~l~D~--~~~---~~~~~~----------gv~~~~~g~~~p~~~liD~~G~i~~~~~~ 147 (166)
T 3p7x_A 87 LPFAQKRWC-ASAGLDNVITLSDH--RDL---SFGENY----------GVVMEELRLLARAVFVLDADNKVVYKEIV 147 (166)
T ss_dssp CHHHHHHHH-HHHTCSSCEEEECT--TTC---HHHHHH----------TCEETTTTEECCEEEEECTTCBEEEEEEC
T ss_pred CHHHHHHHH-HHcCCCceEEccCC--chh---HHHHHh----------CCccccCCceeeEEEEECCCCeEEEEEEc
Confidence 688999999 58899 89999753 112 222222 333 37999999999999998643
No 60
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.96 E-value=1.9e-28 Score=166.42 Aligned_cols=142 Identities=18% Similarity=0.234 Sum_probs=121.2
Q ss_pred CCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 4 SESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
....+|..+|+|++.+.+|+.+++++++ |++||+||++||++|..+++.|.++++++ ++.+++|++|. .++
T Consensus 3 ~~l~~g~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~-----~~~ 73 (154)
T 3ia1_A 3 LAVKPGEPLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREP-----RDT 73 (154)
T ss_dssp -CCCSBEECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCT-----TCC
T ss_pred ccCCCCCcCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCC-----ccc
Confidence 3578999999999999999999999999 99999999999999999999999999999 69999999862 357
Q ss_pred HHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHH
Q 030845 84 SQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDI 163 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (170)
.+.+++|+ ++++++|+++.|. ......+... +++..+|++||||++|+++.++.|..+.+++.+.|
T Consensus 74 ~~~~~~~~-~~~~~~~~~~~d~---~~~~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 139 (154)
T 3ia1_A 74 REVVLEYM-KTYPRFIPLLASD---RDRPHEVAAR----------FKVLGQPWTFVVDREGKVVALFAGRAGREALLDAL 139 (154)
T ss_dssp HHHHHHHH-TTCTTEEECBCCS---SCCHHHHHTT----------SSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHH
T ss_pred HHHHHHHH-HHcCCCccccccc---ccchHHHHHH----------hCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHH
Confidence 89999999 6889999988641 1122222222 57888999999999999999999988999999999
Q ss_pred HHHhh
Q 030845 164 KNALG 168 (170)
Q Consensus 164 ~~ll~ 168 (170)
+++++
T Consensus 140 ~~~~~ 144 (154)
T 3ia1_A 140 LLAGA 144 (154)
T ss_dssp HHTTC
T ss_pred HhccC
Confidence 98865
No 61
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.96 E-value=8e-29 Score=177.10 Aligned_cols=138 Identities=11% Similarity=0.065 Sum_probs=112.2
Q ss_pred CCCCCCcccceEeecC---CCCeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDS---KGKDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQE 80 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~---~G~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~ 80 (170)
....|..+|+|++.+. +|+.+++++++||++||+|| ++|||+|+.+++.|++++++|+++++++|+||+|
T Consensus 18 ~~~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D------ 91 (211)
T 2pn8_A 18 LYFQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD------ 91 (211)
T ss_dssp -CCSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS------
T ss_pred cCCCCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC------
Confidence 4568899999999974 56899999999999999999 9999999999999999999999889999999986
Q ss_pred CCCHHHHHHHHHHhc-------CCCCceeEEeecCCCCCchHHHHHhhhcCCccCccc------ccCceEEEECCCCcEE
Q 030845 81 PGTSQEAHEFACTRY-------KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRI------KWNFTKFLVDTEGNVI 147 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v------~~~p~~~lid~~G~i~ 147 (170)
+.+.+++|+ +++ +++||++.|. . ..+.+. +++ ..+|++||||++|+|+
T Consensus 92 --~~~~~~~~~-~~~~~~~g~~~~~fp~l~D~--~----~~~~~~----------ygv~~~~~g~~~p~~~lID~~G~I~ 152 (211)
T 2pn8_A 92 --SQFTHLAWI-NTPRRQGGLGPIRIPLLSDL--T----HQISKD----------YGVYLEDSGHTLRGLFIIDDKGILR 152 (211)
T ss_dssp --CHHHHHHHH-TSCGGGTCCCSCSSCEEECT--T----SHHHHH----------TTCEETTTTEECEEEEEECTTSBEE
T ss_pred --CHHHHHHHH-HHhhhccCccCCceEEEECC--c----hHHHHH----------cCCcccCCCcccceEEEECCCCEEE
Confidence 678889998 466 7899998752 2 122322 233 2579999999999999
Q ss_pred EecCCCC----CchhHHHHHHHHh
Q 030845 148 GRYSPTT----SPMAIEGDIKNAL 167 (170)
Q Consensus 148 ~~~~g~~----~~~~~~~~l~~ll 167 (170)
+++.|.. +.+++.+.|+++.
T Consensus 153 ~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 153 QITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp EEEEECTTBCCCHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHhh
Confidence 9986543 4467777777764
No 62
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.96 E-value=1.7e-27 Score=157.93 Aligned_cols=135 Identities=13% Similarity=0.141 Sum_probs=116.5
Q ss_pred CCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHH
Q 030845 8 PQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEA 87 (170)
Q Consensus 8 ~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~ 87 (170)
++..+|+|++.+.+|+.+++++++||++||+||++||++|..+++.|++++++++ ++.+++|++|. +.+.+
T Consensus 1 ~~~~~p~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~~~~ 71 (136)
T 1zzo_A 1 TVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLD-------QVPAM 71 (136)
T ss_dssp CCCGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS-------CHHHH
T ss_pred CCCCCCCcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCC-------CHHHH
Confidence 4678999999999999999999999999999999999999999999999999998 69999999874 68899
Q ss_pred HHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHH
Q 030845 88 HEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNA 166 (170)
Q Consensus 88 ~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~l 166 (170)
++|+ +++++ +|+++.+. . ..+... +++..+|+++|+|++|+++ ++.|..+.+++.+.|+++
T Consensus 72 ~~~~-~~~~~~~~~~~~d~--~----~~~~~~----------~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 72 QEFV-NKYPVKTFTQLADT--D----GSVWAN----------FGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTAL 133 (136)
T ss_dssp HHHH-HHTTCTTSEEEECT--T----CHHHHH----------TTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHH
T ss_pred HHHH-HHcCCCceEEEEcC--C----cHHHHH----------cCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHH
Confidence 9999 58899 89988632 1 223332 4788899999999999999 888988899999999998
Q ss_pred hhc
Q 030845 167 LGD 169 (170)
Q Consensus 167 l~~ 169 (170)
+++
T Consensus 134 l~~ 136 (136)
T 1zzo_A 134 TSR 136 (136)
T ss_dssp C--
T ss_pred hcC
Confidence 763
No 63
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.95 E-value=2.2e-28 Score=176.05 Aligned_cols=127 Identities=12% Similarity=0.166 Sum_probs=105.0
Q ss_pred CCCCCCcccceEeecC---CCCeeecCccCCcEEEEEEec-CCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDS---KGKDVDLSIYKGKVLLIVNVA-SKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQE 80 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~---~G~~v~l~~~~gk~~ll~f~~-~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~ 80 (170)
...+|..+|+|+|.+. +|+++++++++||++||+||+ +||++|+.+++.|++++++|+++++.||+|++|
T Consensus 39 ~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D------ 112 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTD------ 112 (222)
T ss_dssp -CCSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS------
T ss_pred cccCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC------
Confidence 4578999999999965 559999999999999999996 999999999999999999999989999999987
Q ss_pred CCCHHHHHHHHHHhc-------CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccc------cCceEEEECCCCcEE
Q 030845 81 PGTSQEAHEFACTRY-------KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIK------WNFTKFLVDTEGNVI 147 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~------~~p~~~lid~~G~i~ 147 (170)
+.+...+|+ +.+ +++|+++.|.+ ..+... +++. .+|++||||++|+|+
T Consensus 113 --~~~~~~~~~-~~~~~~~~~~~~~~~~l~D~~------~~~~~~----------ygv~~~~~g~~~P~~~lID~~G~I~ 173 (222)
T 3ztl_A 113 --SQYSHLAWD-NLDRKSGGLGHMKIPLLADRK------QEISKA----------YGVFDEEDGNAFRGLFIIDPNGILR 173 (222)
T ss_dssp --CHHHHHHHH-HSCGGGTSCCSCSSCEEECSS------SHHHHH----------TTCBCTTTSSBCEEEEEECTTSEEE
T ss_pred --CHHHHHHHH-HHhhhhccccccceeEEeCCc------hHHHHH----------cCCeecCCCCccceEEEECCCCeEE
Confidence 577788888 454 88999997532 122222 2444 679999999999999
Q ss_pred EecCCCCCc
Q 030845 148 GRYSPTTSP 156 (170)
Q Consensus 148 ~~~~g~~~~ 156 (170)
+++.|..+.
T Consensus 174 ~~~~g~~~~ 182 (222)
T 3ztl_A 174 QITINDKPV 182 (222)
T ss_dssp EEEEECTTB
T ss_pred EEEecCCCC
Confidence 998775444
No 64
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.95 E-value=1.2e-28 Score=174.48 Aligned_cols=136 Identities=10% Similarity=0.124 Sum_probs=114.7
Q ss_pred CCCCcccceEeecC--CCC---eeecCcc-CCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCC
Q 030845 7 VPQKSIYEFTVKDS--KGK---DVDLSIY-KGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQ 79 (170)
Q Consensus 7 ~~~~~~p~f~l~~~--~G~---~v~l~~~-~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~ 79 (170)
..|..+|+|++.+. +|+ +++++++ +||++||+|| ++||++|+.+++.|++++++++++++.+++|++|
T Consensus 2 ~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d----- 76 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSID----- 76 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESS-----
T ss_pred CCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECC-----
Confidence 57889999999998 999 9999999 9999999999 9999999999999999999999889999999987
Q ss_pred CCCCHHHHHHHHHHh-------cCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccc-----cCceEEEECCCCcEE
Q 030845 80 EPGTSQEAHEFACTR-------YKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIK-----WNFTKFLVDTEGNVI 147 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~p~~~lid~~G~i~ 147 (170)
+.+.+++|+ ++ ++++|+++.|.+ ..+.+. +++. ++|++||||++|+|+
T Consensus 77 ---~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~------~~~~~~----------~~v~~~~g~~~P~~~lid~~G~i~ 136 (198)
T 1zof_A 77 ---SEQVHFAWK-NTPVEKGGIGQVSFPMVADIT------KSISRD----------YDVLFEEAIALRGAFLIDKNMKVR 136 (198)
T ss_dssp ---CHHHHHHHH-TSCGGGTCCCCCSSCEEECTT------SHHHHH----------TTCEETTTEECEEEEEEETTTEEE
T ss_pred ---CHHHHHHHH-HhhhhcccccCceeEEEECCc------hHHHHH----------hCCcccCCcccceEEEECCCCEEE
Confidence 478888998 46 788999886521 122332 3566 789999999999999
Q ss_pred EecCCCC----CchhHHHHHHHHh
Q 030845 148 GRYSPTT----SPMAIEGDIKNAL 167 (170)
Q Consensus 148 ~~~~g~~----~~~~~~~~l~~ll 167 (170)
+++.|.. +.+++.+.|+++.
T Consensus 137 ~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 137 HAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp EEEEESSSCCCHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHHH
Confidence 9987754 4567777777765
No 65
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.95 E-value=5.1e-28 Score=173.16 Aligned_cols=137 Identities=13% Similarity=0.098 Sum_probs=115.0
Q ss_pred CCCCCcccceEeecC--CC--CeeecCcc-CCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCC
Q 030845 6 SVPQKSIYEFTVKDS--KG--KDVDLSIY-KGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQ 79 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~--~G--~~v~l~~~-~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~ 79 (170)
...|..+|+|++.+. +| +.++++++ +||++||+|| ++||++|+.+++.|.+++++|+++++++|+||+|
T Consensus 21 l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D----- 95 (213)
T 2i81_A 21 TYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVD----- 95 (213)
T ss_dssp CCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESS-----
T ss_pred ccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC-----
Confidence 468899999999998 89 89999999 9999999999 9999999999999999999999889999999987
Q ss_pred CCCCHHHHHHHHHHhc-------CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccc-----cCceEEEECCCCcEE
Q 030845 80 EPGTSQEAHEFACTRY-------KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIK-----WNFTKFLVDTEGNVI 147 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~p~~~lid~~G~i~ 147 (170)
+.+..++|+ +++ +++||++.|. . ..+.+. +++. .+|++||||++|+|+
T Consensus 96 ---~~~~~~~~~-~~~~~~~g~~~~~fp~l~D~--~----~~~~~~----------ygv~~~~g~~~p~~~lID~~G~i~ 155 (213)
T 2i81_A 96 ---SKYTHLAWK-KTPLAKGGIGNIKHTLLSDI--T----KSISKD----------YNVLFDDSVSLRAFVLIDMNGIVQ 155 (213)
T ss_dssp ---CHHHHHHHH-SSCGGGTCCCSCSSEEEECT--T----SHHHHH----------TTCEETTTEECEEEEEECTTSBEE
T ss_pred ---CHHHHHHHH-HHHHhhCCccCCCceEEECC--c----hHHHHH----------hCCccccCCcccEEEEECCCCEEE
Confidence 678889998 466 7899998752 1 223333 3555 689999999999999
Q ss_pred EecCCCC----CchhHHHHHHHHh
Q 030845 148 GRYSPTT----SPMAIEGDIKNAL 167 (170)
Q Consensus 148 ~~~~g~~----~~~~~~~~l~~ll 167 (170)
+++.|.. +.+++.+.|+++.
T Consensus 156 ~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 156 HLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHHH
Confidence 9986543 3577888887765
No 66
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.95 E-value=4e-28 Score=166.76 Aligned_cols=140 Identities=19% Similarity=0.202 Sum_probs=117.6
Q ss_pred CCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCC-----------
Q 030845 7 VPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQ----------- 75 (170)
Q Consensus 7 ~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~----------- 75 (170)
..|..+|+|++.+.+|+.+++++++||++||+||++||++|..+++.|.+++++++ ++.+++|++|.
T Consensus 12 ~~g~~~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~ 89 (165)
T 3ha9_A 12 EVLEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNK 89 (165)
T ss_dssp HHHHHHHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCS
T ss_pred cccCcCCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEeccccccccccccc
Confidence 35678999999999999999999999999999999999999999999999999998 79999999872
Q ss_pred CCCCCCCCHHHHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCC
Q 030845 76 FLKQEPGTSQEAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTT 154 (170)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~ 154 (170)
+...++++.+.+++|+ +++++ +|+++.| + ..+... +++..+|+++|||++|+++. .|..
T Consensus 90 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d-~------~~~~~~----------~~v~~~P~~~lid~~G~i~~--~g~~ 149 (165)
T 3ha9_A 90 PGYPPPDTPEMFRKFI-ANYGDPSWIMVMD-D------GSLVEK----------FNVRSIDYIVIMDKSSNVLY--AGTT 149 (165)
T ss_dssp TTSCCCCCHHHHHHHH-HHHSCTTSEEEEC-C------SHHHHH----------TTCCSSSEEEEEETTCCEEE--EEES
T ss_pred ccCCCCCCHHHHHHHH-HHcCCCCeeEEeC-h------HHHHHH----------hCCCCceEEEEEcCCCcEEE--eCCC
Confidence 2233446889999999 58899 9999865 1 223333 47888999999999999999 6666
Q ss_pred -CchhHHHHHHHHhh
Q 030845 155 -SPMAIEGDIKNALG 168 (170)
Q Consensus 155 -~~~~~~~~l~~ll~ 168 (170)
+.+++.+.|++++.
T Consensus 150 ~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 150 PSLGELESVIKSVQG 164 (165)
T ss_dssp CCHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHHhc
Confidence 78889999988765
No 67
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.95 E-value=3.1e-28 Score=166.61 Aligned_cols=138 Identities=10% Similarity=0.195 Sum_probs=110.5
Q ss_pred CCCCCCCcccceEeecCCCCeeecCccCCc--EEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCC
Q 030845 4 SESVPQKSIYEFTVKDSKGKDVDLSIYKGK--VLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQE 80 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk--~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~ 80 (170)
.....|..+|+|++.+.+|+++++++++|| ++||+|| ++|||+|+.+++.|.++++++++++ .+++|+.|
T Consensus 5 ~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d------ 77 (159)
T 2a4v_A 5 NELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSAD------ 77 (159)
T ss_dssp TCCCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESC------
T ss_pred CcCCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCC------
Confidence 346789999999999999999999999887 8999987 8999999999999999999999989 99999987
Q ss_pred CCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCc------eEEEECCCCcEEEecCCCC
Q 030845 81 PGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNF------TKFLVDTEGNVIGRYSPTT 154 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p------~~~lid~~G~i~~~~~g~~ 154 (170)
+.+.+++|+ ++++++||++.|. .+ .+.+.+ ++...| ++||| ++|+|++++.|..
T Consensus 78 --~~~~~~~~~-~~~~~~~~~l~D~--~~----~~~~~~----------gv~~~p~~g~~~~~~li-~~G~i~~~~~g~~ 137 (159)
T 2a4v_A 78 --SVTSQKKFQ-SKQNLPYHLLSDP--KR----EFIGLL----------GAKKTPLSGSIRSHFIF-VDGKLKFKRVKIS 137 (159)
T ss_dssp --CHHHHHHHH-HHHTCSSEEEECT--TC----HHHHHH----------TCBSSSSSCBCCEEEEE-ETTEEEEEEESCC
T ss_pred --CHHHHHHHH-HHhCCCceEEECC--cc----HHHHHh----------CCcccccCCccceEEEE-cCCEEEEEEccCC
Confidence 578899999 5889999999752 21 223332 344444 89999 9999999998764
Q ss_pred Cch---hHHHHHHHHhh
Q 030845 155 SPM---AIEGDIKNALG 168 (170)
Q Consensus 155 ~~~---~~~~~l~~ll~ 168 (170)
+.. .+.+.|.++++
T Consensus 138 ~~~~~~~~~~~l~~~l~ 154 (159)
T 2a4v_A 138 PEVSVNDAKKEVLEVAE 154 (159)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHH
Confidence 443 34444444443
No 68
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.95 E-value=4.1e-28 Score=167.08 Aligned_cols=131 Identities=11% Similarity=0.057 Sum_probs=103.0
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
....|..+|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|+++++++ .++.+++||.| +
T Consensus 16 ~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d--------~ 85 (165)
T 1q98_A 16 FPQVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISAD--------L 85 (165)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESS--------C
T ss_pred cCCCCCCCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCC--------C
Confidence 457889999999999999999999999999999999 789999999999999999999 67999999976 5
Q ss_pred HHHHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCC
Q 030845 84 SQEAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSP 152 (170)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g 152 (170)
.+.+++|+ +++++ +||++.|. .. ..+.+.+..........+. ++|++||||++|+|++++.|
T Consensus 86 ~~~~~~~~-~~~~~~~~~~l~D~--~~---~~~~~~~gv~~~~~~~~g~-~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 86 PFAQARFC-GAEGIENAKTVSTF--RN---HALHSQLGVDIQTGPLAGL-TSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp HHHHTTCT-TTTTCTTEEEEECT--TC---THHHHHTTCEECSSTTTTS-BCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHHH-HHcCCCceEEeecc--cc---chHHHHhCceecccccCCc-cceeEEEEcCCCEEEEEEeC
Confidence 78888998 58899 79998752 11 2233332211000000011 46999999999999999865
No 69
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.95 E-value=4.5e-28 Score=174.26 Aligned_cols=139 Identities=11% Similarity=0.083 Sum_probs=113.5
Q ss_pred CCCCCCCcccceEeec---CCCCeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCC
Q 030845 4 SESVPQKSIYEFTVKD---SKGKDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQ 79 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~~---~~G~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~ 79 (170)
.....|..+|+|++.+ .+|+++++++++||++||+|| ++|||+|+.+++.|.+++++|+++++++|+|++|
T Consensus 25 ~~l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D----- 99 (220)
T 1zye_A 25 PAPAVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVD----- 99 (220)
T ss_dssp --CCTTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESS-----
T ss_pred CcccCCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-----
Confidence 3467899999999985 578999999999999999999 9999999999999999999999889999999987
Q ss_pred CCCCHHHHHHHHHHhc-------CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccc------cCceEEEECCCCcE
Q 030845 80 EPGTSQEAHEFACTRY-------KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIK------WNFTKFLVDTEGNV 146 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~------~~p~~~lid~~G~i 146 (170)
+.+..++|+ +++ +++||++.|.+ ..+.+. +++. .+|++||||++|+|
T Consensus 100 ---~~~~~~~~~-~~~~~~~g~~~~~fp~l~D~~------~~i~~~----------ygv~~~~~g~~~P~~~liD~~G~I 159 (220)
T 1zye_A 100 ---SHFSHLAWI-NTPRKNGGLGHMNIALLSDLT------KQISRD----------YGVLLEGPGLALRGLFIIDPNGVI 159 (220)
T ss_dssp ---CHHHHHHHH-TSCGGGTCCCSCSSEEEECTT------SHHHHH----------TTCEETTTTEECEEEEEECTTSBE
T ss_pred ---CHHHHHHHH-HHHHHhCCCcCCceEEEECCc------HHHHHH----------hCCeecCCCcccceEEEECCCCEE
Confidence 567888888 455 78899886521 223333 3555 78999999999999
Q ss_pred EEecCCCC----CchhHHHHHHHHh
Q 030845 147 IGRYSPTT----SPMAIEGDIKNAL 167 (170)
Q Consensus 147 ~~~~~g~~----~~~~~~~~l~~ll 167 (170)
++++.|.. +.+++.+.|+++.
T Consensus 160 ~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 160 KHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp EEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCHHHHHHHHHHhh
Confidence 99886643 3467888887765
No 70
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.95 E-value=3.3e-27 Score=156.74 Aligned_cols=132 Identities=11% Similarity=0.235 Sum_probs=113.9
Q ss_pred CcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHH
Q 030845 10 KSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHE 89 (170)
Q Consensus 10 ~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~ 89 (170)
..+|+|++++.+|+.+++++++||++||+||++||++|..+++.|++++++++ ++.+++|++|. +.+.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~~~~~~ 72 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRA-------DVGAMQS 72 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS-------CHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCC-------CHHHHHH
Confidence 46899999999999999999999999999999999999999999999999998 79999999874 6889999
Q ss_pred HHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecC---CCCCchhHHHHHHHH
Q 030845 90 FACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYS---PTTSPMAIEGDIKNA 166 (170)
Q Consensus 90 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~---g~~~~~~~~~~l~~l 166 (170)
|+ ++++.+|+++.|.+ ..+... +++..+|+++++|++|+++ ++. |..+.+++.+.|+++
T Consensus 73 ~~-~~~~~~~~~~~d~~------~~~~~~----------~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 73 FV-SKYNLNFTNLNDAD------GVIWAR----------YNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp HH-HHHTCCSEEEECTT------SHHHHH----------TTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC
T ss_pred HH-HHcCCCceEEECCc------hhHHHh----------cCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHH
Confidence 99 58899999886421 122322 4788899999999999999 888 888889999999887
Q ss_pred hh
Q 030845 167 LG 168 (170)
Q Consensus 167 l~ 168 (170)
++
T Consensus 135 l~ 136 (136)
T 1lu4_A 135 TS 136 (136)
T ss_dssp --
T ss_pred hC
Confidence 63
No 71
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.95 E-value=6.6e-28 Score=175.40 Aligned_cols=137 Identities=12% Similarity=0.093 Sum_probs=108.3
Q ss_pred CCCCCCcccceEeec---CCCCeeecCccCCcEEEEEEec-CCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKD---SKGKDVDLSIYKGKVLLIVNVA-SKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQE 80 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~---~~G~~v~l~~~~gk~~ll~f~~-~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~ 80 (170)
....|.++|+|++++ .+|++++|++++||++||+||+ +|||+|+.+++.|++++++|+++|+.+|+||+|
T Consensus 47 ~l~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D------ 120 (240)
T 3qpm_A 47 KAKISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVD------ 120 (240)
T ss_dssp SCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESS------
T ss_pred cCCCCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC------
Confidence 356899999999875 4467999999999999999998 999999999999999999999999999999987
Q ss_pred CCCHHHHHHHHHHhc-------CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccc------cCceEEEECCCCcEE
Q 030845 81 PGTSQEAHEFACTRY-------KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIK------WNFTKFLVDTEGNVI 147 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~------~~p~~~lid~~G~i~ 147 (170)
+.+..++|+. ++ +++||++.|.+ + .+.+. |++. .+|++||||++|+|+
T Consensus 121 --~~~~~~~~~~-~~~~~~~~~~~~fp~l~D~~--~----~v~~~----------ygv~~~~~g~~~p~~flID~~G~I~ 181 (240)
T 3qpm_A 121 --SQFTHLAWII-TPRKQGGLGPMKIPLLSDLT--H----QISKD----------YGVYLEDQGHTLRGLFIIDEKGVLR 181 (240)
T ss_dssp --CHHHHHHHHH-SCGGGTCCCSCSSCEEECTT--S----HHHHH----------TTCEETTTTEECEEEEEECTTSBEE
T ss_pred --CHHHHHHHHH-HHHhhcCCCCCceeEEeCch--H----HHHHH----------hCCccccCCCccceEEEEcCCCeEE
Confidence 5788889984 54 78999997532 1 22222 2343 579999999999999
Q ss_pred EecCCCCC----chhHHHHHHHH
Q 030845 148 GRYSPTTS----PMAIEGDIKNA 166 (170)
Q Consensus 148 ~~~~g~~~----~~~~~~~l~~l 166 (170)
+++.+..+ .+++.+.|+++
T Consensus 182 ~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 182 QITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp EEEEECTTBCCCHHHHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHh
Confidence 99765333 34455555443
No 72
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.95 E-value=7.5e-28 Score=170.72 Aligned_cols=144 Identities=13% Similarity=0.108 Sum_probs=108.3
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
....|..+|+|+|+|.+|+.++|++++||++||+|| ++||++|+.+++.|++++++| +++++++||.| +
T Consensus 51 ~l~~G~~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D--------~ 120 (200)
T 3zrd_A 51 LPQIGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSD--------L 120 (200)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESS--------C
T ss_pred cCCCCCCCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECC--------C
Confidence 467899999999999999999999999999999999 679999999999999999999 67999999976 6
Q ss_pred HHHHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCC--CCchhHH
Q 030845 84 SQEAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPT--TSPMAIE 160 (170)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~--~~~~~~~ 160 (170)
.+.+++|+ +++++ +|+++.|. ... .+...+.........+++ +.|++||||++|+|++++.+. ....++.
T Consensus 121 ~~~~~~~~-~~~~~~~f~~l~D~--~~~---~~~~~ygv~~~~~~~~g~-~~p~~~lID~~G~I~~~~~~~~~~~~~~~~ 193 (200)
T 3zrd_A 121 PFAQSRFC-GAEGLSNVITLSTL--RGA---DFKQAYGVAITEGPLAGL-TARAVVVLDGQDNVIYSELVNEITTEPNYD 193 (200)
T ss_dssp HHHHTTCT-TTTTCTTEEEEETT--SCT---HHHHHTTCEECSSTTTTS-BCCEEEEECTTSBEEEEEECSBTTSCCCHH
T ss_pred HHHHHHHH-HHcCCCCceEEecC--chH---HHHHHhCceeecccCCCc-cccEEEEECCCCeEEEEEecCCcccCCCHH
Confidence 88889998 58899 99988753 111 222222110000000011 469999999999999997542 2223455
Q ss_pred HHHHH
Q 030845 161 GDIKN 165 (170)
Q Consensus 161 ~~l~~ 165 (170)
+.|+.
T Consensus 194 ~~l~~ 198 (200)
T 3zrd_A 194 AALAA 198 (200)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55543
No 73
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.95 E-value=3.2e-28 Score=167.66 Aligned_cols=139 Identities=14% Similarity=0.118 Sum_probs=112.5
Q ss_pred CCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCC-CCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCC
Q 030845 4 SESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASK-CGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPG 82 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~-C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~ 82 (170)
....+|..+|+|++.+.+|+++++++++||++||+||++| |++|+.+++.|+++++++ .++.+++|+.|
T Consensus 16 ~~~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d-------- 85 (167)
T 2jsy_A 16 QEVKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISAD-------- 85 (167)
T ss_dssp CCCCTTSCCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECS--------
T ss_pred CccCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECC--------
Confidence 3467899999999999999999999999999999999998 999999999999999999 57999999987
Q ss_pred CHHHHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCccccc------CceEEEECCCCcEEEecCCC--
Q 030845 83 TSQEAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKW------NFTKFLVDTEGNVIGRYSPT-- 153 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~p~~~lid~~G~i~~~~~g~-- 153 (170)
+.+.+++|+ +++++ +||++.|. .. ..+.+. +++.. .|++||||++|+|++++.|.
T Consensus 86 ~~~~~~~~~-~~~~~~~~~~~~d~-~~----~~~~~~----------~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~ 149 (167)
T 2jsy_A 86 LPFAQARWC-GANGIDKVETLSDH-RD----MSFGEA----------FGVYIKELRLLARSVFVLDENGKVVYAEYVSEA 149 (167)
T ss_dssp SGGGTSCCG-GGSSCTTEEEEEGG-GT----CHHHHH----------TTCBBTTTCSBCCEEEEECTTSCEEEEEECSBT
T ss_pred CHHHHHHHH-HhcCCCCceEeeCC-ch----hHHHHH----------hCCccccCCceeeEEEEEcCCCcEEEEEecCCc
Confidence 456678888 58899 89988641 11 122222 23333 48999999999999998642
Q ss_pred ---CCchhHHHHHHHHhh
Q 030845 154 ---TSPMAIEGDIKNALG 168 (170)
Q Consensus 154 ---~~~~~~~~~l~~ll~ 168 (170)
.+.+++.+.|+++++
T Consensus 150 ~~~~~~~~l~~~l~~llk 167 (167)
T 2jsy_A 150 TNHPNYEKPIEAAKALVK 167 (167)
T ss_dssp TSCCCSHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHhhC
Confidence 234778888888764
No 74
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.95 E-value=2.8e-27 Score=166.60 Aligned_cols=135 Identities=14% Similarity=0.102 Sum_probs=112.4
Q ss_pred CCCcccceEeecC--CC--CeeecCcc-CCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCC
Q 030845 8 PQKSIYEFTVKDS--KG--KDVDLSIY-KGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEP 81 (170)
Q Consensus 8 ~~~~~p~f~l~~~--~G--~~v~l~~~-~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~ 81 (170)
.|..+|+|++.+. +| +.++++++ +||++||+|| ++||++|+.+++.|.+++++|+++++.+++||+|
T Consensus 2 ~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d------- 74 (192)
T 2h01_A 2 FQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVD------- 74 (192)
T ss_dssp CSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESS-------
T ss_pred CCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeC-------
Confidence 5889999999998 99 89999999 9999999999 9999999999999999999999889999999987
Q ss_pred CCHHHHHHHHHHhc-------CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccc-----cCceEEEECCCCcEEEe
Q 030845 82 GTSQEAHEFACTRY-------KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIK-----WNFTKFLVDTEGNVIGR 149 (170)
Q Consensus 82 ~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~p~~~lid~~G~i~~~ 149 (170)
+.+..++|+ +++ +++||++.|. . ..+.+. +++. .+|++||||++|+|+++
T Consensus 75 -~~~~~~~~~-~~~~~~~~~~~~~~~~l~D~--~----~~~~~~----------~gv~~~~g~~~P~~~liD~~G~i~~~ 136 (192)
T 2h01_A 75 -SKFTHLAWK-KTPLSQGGIGNIKHTLISDI--S----KSIARS----------YDVLFNESVALRAFVLIDKQGVVQHL 136 (192)
T ss_dssp -CHHHHHHHH-TSCGGGTCCCSCSSEEEECT--T----SHHHHH----------TTCEETTTEECCEEEEECTTSBEEEE
T ss_pred -CHHHHHHHH-HhHHhhCCccCCCcCeEECC--c----HHHHHH----------hCCcCcCCceeeEEEEEcCCCEEEEE
Confidence 578889998 466 7889988652 1 223333 3555 68999999999999999
Q ss_pred cCCCC----CchhHHHHHHHHh
Q 030845 150 YSPTT----SPMAIEGDIKNAL 167 (170)
Q Consensus 150 ~~g~~----~~~~~~~~l~~ll 167 (170)
+.|.. +.+++.+.|+++.
T Consensus 137 ~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 137 LVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp EEGGGSSGGGHHHHHHHHHHHH
T ss_pred EeCCCCCCCCHHHHHHHHHHHh
Confidence 87643 2456777777664
No 75
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.95 E-value=1.5e-27 Score=165.72 Aligned_cols=145 Identities=10% Similarity=0.019 Sum_probs=105.8
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCC-CCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASK-CGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~-C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
....|..+|+|++.+.+|+.+++++++||++||+||++| |++|+.+++.|++++++ .++.+|+|+.| +
T Consensus 17 ~l~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D--------~ 85 (175)
T 1xvq_A 17 LPAVGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKD--------L 85 (175)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESS--------C
T ss_pred CCCcCCcCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECC--------C
Confidence 357899999999999999999999999999999999998 99999999999999998 56999999986 5
Q ss_pred HHHHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCC--CCCchhHH
Q 030845 84 SQEAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSP--TTSPMAIE 160 (170)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g--~~~~~~~~ 160 (170)
.+.+++|+ +++++ +|+++.|.+ .. +...+..........+ .+.|++||||++|+|++++.| .....++.
T Consensus 86 ~~~~~~~~-~~~~~~~~~~l~D~~---~~---~~~~~gv~~~~~~~~g-~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~ 157 (175)
T 1xvq_A 86 PFAQKRFC-GAEGTENVMPASAFR---DS---FGEDYGVTIADGPMAG-LLARAIVVIGADGNVAYTELVPEIAQEPNYE 157 (175)
T ss_dssp HHHHTTCC-------CEEEEECTT---SS---HHHHTTCBBCSSTTTT-SBCSEEEEECTTSBEEEEEECSBTTCCCCHH
T ss_pred HHHHHHHH-HHcCCCCceEeeCCH---HH---HHHHhCCcccccccCC-cccceEEEECCCCeEEEEEECCCcCCCCCHH
Confidence 77888898 57888 899887532 22 2222211000000001 124899999999999999863 33344677
Q ss_pred HHHHHHhh
Q 030845 161 GDIKNALG 168 (170)
Q Consensus 161 ~~l~~ll~ 168 (170)
+.|+.+.+
T Consensus 158 ~~l~~l~~ 165 (175)
T 1xvq_A 158 AALAALGA 165 (175)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77776654
No 76
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.95 E-value=7.7e-28 Score=170.18 Aligned_cols=138 Identities=14% Similarity=0.149 Sum_probs=113.4
Q ss_pred CCCCCCcccceEeecC-CC--CeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDS-KG--KDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQE 80 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~-~G--~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~ 80 (170)
....|..+|+|++.+. +| +.+++++++||++||+|| ++||++|+.+++.|.+++++|+++++.+++|++|
T Consensus 4 ~l~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------ 77 (197)
T 1qmv_A 4 NARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVD------ 77 (197)
T ss_dssp TBCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS------
T ss_pred cccCCCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC------
Confidence 4578999999999997 88 999999999999999999 9999999999999999999999889999999987
Q ss_pred CCCHHHHHHHHHHhc-------CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccc------cCceEEEECCCCcEE
Q 030845 81 PGTSQEAHEFACTRY-------KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIK------WNFTKFLVDTEGNVI 147 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~------~~p~~~lid~~G~i~ 147 (170)
+.+...+|+ +++ +++||++.|. . ..+... +++. .+|++||||++|+|+
T Consensus 78 --~~~~~~~~~-~~~~~~~~~~~~~~p~l~D~--~----~~~~~~----------~gv~~~~~~~~~P~~~lid~~G~i~ 138 (197)
T 1qmv_A 78 --SQFTHLAWI-NTPRKEGGLGPLNIPLLADV--T----RRLSED----------YGVLKTDEGIAYRGLFIIDGKGVLR 138 (197)
T ss_dssp --CHHHHHHHH-TSCGGGTCCCSCSSCEEECT--T----CHHHHH----------TTCEETTTTEECEEEEEECTTSBEE
T ss_pred --CHHHHHHHH-HHHHhhCCCCCCceEEEECC--c----HHHHHH----------cCCccCCCCceeeEEEEECCCCcEE
Confidence 567788888 455 7899988652 1 122332 2444 679999999999999
Q ss_pred EecCCCCC----chhHHHHHHHHh
Q 030845 148 GRYSPTTS----PMAIEGDIKNAL 167 (170)
Q Consensus 148 ~~~~g~~~----~~~~~~~l~~ll 167 (170)
+++.|..+ .+++.+.|+++.
T Consensus 139 ~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 139 QITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp EEEEECTTBCCCHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCCHHHHHHHHHhcc
Confidence 99876443 466777777654
No 77
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.95 E-value=1.8e-26 Score=152.99 Aligned_cols=136 Identities=16% Similarity=0.219 Sum_probs=113.3
Q ss_pred cccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHH
Q 030845 11 SIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEF 90 (170)
Q Consensus 11 ~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~ 90 (170)
++|+|++++.+|+.+++++++||++||+||++||++|..+++.|.+++++++ .++.+++|..+. ....++.+.+++|
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~v~i~~~~--~~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAG-DDYVVLTVVSPG--HKGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT-TTEEEEEEECTT--STTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC-CCcEEEEEEcCC--CCchhhHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999965 469999996543 1234578899999
Q ss_pred HHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHH
Q 030845 91 ACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNA 166 (170)
Q Consensus 91 ~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~l 166 (170)
+ ++++. +|+++.|. . ..+.+. +++..+|+++|+|++|+++.++.|..+.+++.+.|+++
T Consensus 78 ~-~~~~~~~~~~~~d~--~----~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 78 Y-KGLDYKNLPVLVDP--S----GKLLET----------YGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp H-TTCCCTTCCEEECT--T----CHHHHH----------TTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred H-hhcCCCCeeEEECc--c----hHHHHH----------cCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 9 57888 89988642 1 123333 47888999999999999999999988888888888764
No 78
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.95 E-value=1.8e-27 Score=174.27 Aligned_cols=143 Identities=11% Similarity=0.067 Sum_probs=108.3
Q ss_pred CCCCCCcccceEeec---CCCCeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKD---SKGKDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQE 80 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~---~~G~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~ 80 (170)
....|.++|+|++++ .+|++++|++++||++||+|| ++||++|+.+++.|.+++++|+++|++||+||+|
T Consensus 61 ~l~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D------ 134 (254)
T 3tjj_A 61 KAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD------ 134 (254)
T ss_dssp CCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESS------
T ss_pred ccCCCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCC------
Confidence 356899999999774 468899999999999999999 8999999999999999999999999999999987
Q ss_pred CCCHHHHHHHHHHhc-------CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCC
Q 030845 81 PGTSQEAHEFACTRY-------KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPT 153 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~ 153 (170)
+.+...+|+ +++ +++||++.|.+ + .+...+...... .+ ...|++||||++|+|++++.+.
T Consensus 135 --~~~~~~~~~-~~~~~~~g~~~~~fp~l~D~~--~----~va~~ygv~~~~---~g-~~~p~tflID~~G~I~~~~~~~ 201 (254)
T 3tjj_A 135 --SQFTHLAWI-NTPRRQGGLGPIRIPLLSDLT--H----QISKDYGVYLED---SG-HTLRGLFIIDDKGILRQITLND 201 (254)
T ss_dssp --CHHHHHHHH-TSCGGGTSCCSCSSCEEECTT--S----HHHHHHTCEETT---TT-EECEEEEEECTTSBEEEEEEEC
T ss_pred --CHHHHHHHH-HHHHHhcCCcccccceeeCcH--H----HHHHHcCCcccc---CC-CccceEEEECCCCeEEEEEecC
Confidence 578888998 455 78999997532 1 222222100000 01 1468999999999999997653
Q ss_pred CC----chhHHHHHHHH
Q 030845 154 TS----PMAIEGDIKNA 166 (170)
Q Consensus 154 ~~----~~~~~~~l~~l 166 (170)
.+ .+++.+.|+.+
T Consensus 202 ~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 202 LPVGRSVDETLRLVQAF 218 (254)
T ss_dssp TTCCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhh
Confidence 33 34555555443
No 79
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.95 E-value=1.9e-28 Score=168.37 Aligned_cols=133 Identities=14% Similarity=0.132 Sum_probs=105.4
Q ss_pred CCCCCCcccceEee--cCCC--CeeecCc-cCCcEEEEEEe-cCCCCCch-HhHHHHHHHHHHhccCCeE-EEEeeCCCC
Q 030845 5 ESVPQKSIYEFTVK--DSKG--KDVDLSI-YKGKVLLIVNV-ASKCGFTD-SNYSQLTDLYNKYKHKGLE-ILAFPCNQF 76 (170)
Q Consensus 5 ~~~~~~~~p~f~l~--~~~G--~~v~l~~-~~gk~~ll~f~-~~~C~~C~-~~~~~l~~~~~~~~~~~v~-vi~vs~d~~ 76 (170)
....|..+|+|++. +.+| +++++++ ++||++||+|| ++|||+|+ .+++.|++++++++++|++ +++||.|
T Consensus 3 ~~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d-- 80 (162)
T 1tp9_A 3 PIAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN-- 80 (162)
T ss_dssp CCCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESS--
T ss_pred cCCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC--
Confidence 35789999999986 8999 9999999 89999999999 89999999 8999999999999988999 9999986
Q ss_pred CCCCCCCHHHHHHHHHHhcCC--CCceeEEeecCCCCCchHHHHHhhhcC-CccCcccccCceEEEECCCCcEEEecCCC
Q 030845 77 LKQEPGTSQEAHEFACTRYKA--EYPIFQKVRVNGPNAEPLYKFLKASKT-GYFGSRIKWNFTKFLVDTEGNVIGRYSPT 153 (170)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~p~~~lid~~G~i~~~~~g~ 153 (170)
+.+.+++|+ +++++ +||++.|.+ ..+.+.++.... ...|.++...|++|||| +|+|++++.|.
T Consensus 81 ------~~~~~~~~~-~~~~~~~~~~~l~D~~------~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 81 ------DPFVMKAWA-KSYPENKHVKFLADGS------ATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAANIEG 146 (162)
T ss_dssp ------CHHHHHHHH-HTCTTCSSEEEEECTT------SHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEECS
T ss_pred ------CHHHHHHHH-HhcCCCCCeEEEECCC------chHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEEeeC
Confidence 578899999 58889 899997522 222333221100 00111223579999999 99999998775
No 80
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.95 E-value=2.9e-27 Score=162.03 Aligned_cols=136 Identities=16% Similarity=0.142 Sum_probs=114.0
Q ss_pred eEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHh
Q 030845 15 FTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTR 94 (170)
Q Consensus 15 f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~ 94 (170)
+++.+.+|+.+++++++||++||+||++||++|+.+++.|.+++++++..++.+++|++|.. ...++.+.+++|. .+
T Consensus 21 p~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~--~~~~~~~~~~~~~-~~ 97 (164)
T 2h30_A 21 STMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGF--LHEKKDGEFQKWY-AG 97 (164)
T ss_dssp TTCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTS--TTCCCTTHHHHHH-TT
T ss_pred CccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCC--ccccCHHHHHHHH-Hh
Confidence 38999999999999999999999999999999999999999999999888999999998752 2334677888888 46
Q ss_pred cCCC-CceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 95 YKAE-YPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 95 ~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
++++ +++..| . ...+... +++..+|++||||++|+++.++.|..+.+++.+.|++++++
T Consensus 98 ~~~~~~~~~~d--~----~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~~ 157 (164)
T 2h30_A 98 LNYPKLPVVTD--N----GGTIAQN----------LNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNAD 157 (164)
T ss_dssp SCCTTSCEEEC--T----TCHHHHH----------TTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTCC
T ss_pred CCCCcceEEEc--C----chHHHHH----------cCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 6777 777643 1 1223333 47888999999999999999999988899999999988754
No 81
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=8.5e-27 Score=159.15 Aligned_cols=133 Identities=17% Similarity=0.210 Sum_probs=110.6
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCH
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTS 84 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~ 84 (170)
...+|..+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|.++++++++.++.+++|+.|.
T Consensus 14 ~~~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~--------- 84 (158)
T 3hdc_A 14 LVRTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK--------- 84 (158)
T ss_dssp CCCTTSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS---------
T ss_pred ccCCCCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH---------
Confidence 45789999999999999999999999999999999999999999999999999999998889999999763
Q ss_pred HHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCch--hHHHH
Q 030845 85 QEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPM--AIEGD 162 (170)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~--~~~~~ 162 (170)
.+++|+ ++++++|+++.|.+ ..+... +++..+|++||||++|+|+.++.|..+.+ ++.+.
T Consensus 85 -~~~~~~-~~~~~~~~~~~d~~------~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~ 146 (158)
T 3hdc_A 85 -RFPEKY-RRAPVSFNFLSDAT------GQVQQR----------YGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSY 146 (158)
T ss_dssp -SCCGGG-GGCCCSCEEEECTT------SHHHHH----------TTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHH
T ss_pred -HHHHHH-HHcCCCceEEECch------HHHHHH----------hCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHH
Confidence 355677 58899999886421 223333 47888999999999999999998865443 34444
Q ss_pred HH
Q 030845 163 IK 164 (170)
Q Consensus 163 l~ 164 (170)
+.
T Consensus 147 ~~ 148 (158)
T 3hdc_A 147 LK 148 (158)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 82
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.94 E-value=5.2e-28 Score=167.76 Aligned_cols=147 Identities=17% Similarity=0.178 Sum_probs=107.8
Q ss_pred CCCCCCCcccceEee-cCCCCeeecCc-cCCcEEEEEE-ecCCCCCch-HhHHHHHHHHHHhccCCeEEEE-eeCCCCCC
Q 030845 4 SESVPQKSIYEFTVK-DSKGKDVDLSI-YKGKVLLIVN-VASKCGFTD-SNYSQLTDLYNKYKHKGLEILA-FPCNQFLK 78 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~-~~~G~~v~l~~-~~gk~~ll~f-~~~~C~~C~-~~~~~l~~~~~~~~~~~v~vi~-vs~d~~~~ 78 (170)
.+...|.++|+|+|. +.+|+.++|++ ++||+++|+| |++|||+|. .+++.|++++++|+++|+++|+ ||.|
T Consensus 13 ~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D---- 88 (173)
T 3mng_A 13 APIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVN---- 88 (173)
T ss_dssp CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS----
T ss_pred CCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCC----
Confidence 456789999999999 99999999999 5998666655 599999999 5999999999999999999997 9976
Q ss_pred CCCCCHHHHHHHHHHhcCCC--CceeEEeecCCCCCchHHHHHhhh-cCCccCcccccCceEEEECCCCcEEEecCCCC-
Q 030845 79 QEPGTSQEAHEFACTRYKAE--YPIFQKVRVNGPNAEPLYKFLKAS-KTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTT- 154 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~- 154 (170)
+.+..++|+ ++++.+ ||+++|.+ + .....|...... ..+.+| +....|++|||| +|+|++.+.+..
T Consensus 89 ----~~~~~~~f~-~~~~~~~~fp~l~D~~--~-~va~~yGv~~~~~~~~~~g-~~~~~r~tfvID-dG~I~~~~v~~~~ 158 (173)
T 3mng_A 89 ----DAFVTGEWG-RAHKAEGKVRLLADPT--G-AFGKETDLLLDDSLVSIFG-NRRLKRFSMVVQ-DGIVKALNVEPDG 158 (173)
T ss_dssp ----CHHHHHHHH-HHTTCTTTCEEEECTT--C-HHHHHHTCBCCSTTHHHHS-SCCBCCEEEEEE-TTEEEEEEECTTS
T ss_pred ----CHHHHHHHH-HHhCCCCceEEEECCC--h-HHHHHhCCCcccccccccC-CcceEEEEEEEE-CCEEEEEEEeCCC
Confidence 678899999 588888 99997632 2 122222211000 000011 123468999999 999999986643
Q ss_pred ---CchhHHHHHH
Q 030845 155 ---SPMAIEGDIK 164 (170)
Q Consensus 155 ---~~~~~~~~l~ 164 (170)
+..+..+.|+
T Consensus 159 ~g~~~~~~~~vl~ 171 (173)
T 3mng_A 159 TGLTCSLAPNIIS 171 (173)
T ss_dssp SCSSTTSHHHHHH
T ss_pred CCcchHHHHHHHH
Confidence 2344455444
No 83
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.91 E-value=2.5e-29 Score=171.82 Aligned_cols=140 Identities=19% Similarity=0.242 Sum_probs=113.3
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHH-HHHHhc-cCCeEEEEeeCCCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTD-LYNKYK-HKGLEILAFPCNQFLKQEPG 82 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~-~~~~~~-~~~v~vi~vs~d~~~~~~~~ 82 (170)
...+|..+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|.+ ++++++ +.++.+++|++|.
T Consensus 6 ~l~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~------- 78 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDE------- 78 (159)
Confidence 4578999999999999999999999999999999999999999999999998 999998 6789999999873
Q ss_pred CHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHH
Q 030845 83 TSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGD 162 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (170)
+.+.+++|. ++++++||++.|.+.. ....|. ..+..+|++||||++|+|++++.| .+++++.+.
T Consensus 79 ~~~~~~~~~-~~~~~~~~~~~d~~~~---~~~~~~-----------~~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~ 142 (159)
T 2ls5_A 79 PLEKVLAFA-KSTGVTYPLGLDPGAD---IFAKYA-----------LRDAGITRNVLIDREGKIVKLTRL-YNEEEFASL 142 (159)
Confidence 456778888 5889999999763321 121221 124457999999999999999877 356667666
Q ss_pred HHHHh
Q 030845 163 IKNAL 167 (170)
Q Consensus 163 l~~ll 167 (170)
|+++.
T Consensus 143 l~~l~ 147 (159)
T 2ls5_A 143 VQQIN 147 (159)
Confidence 66654
No 84
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.94 E-value=1.1e-26 Score=160.03 Aligned_cols=137 Identities=18% Similarity=0.208 Sum_probs=114.9
Q ss_pred CCCCCcccceEeecC--CCCeeecCcc-CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCC
Q 030845 6 SVPQKSIYEFTVKDS--KGKDVDLSIY-KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPG 82 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~--~G~~v~l~~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~ 82 (170)
...|..+|+|++.+. +|+.++++++ +||++||+||++|||+|+.+++.|++++++ ++.+++|++|.
T Consensus 22 ~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~------- 90 (168)
T 2b1k_A 22 ALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKD------- 90 (168)
T ss_dssp TTTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESC-------
T ss_pred cccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCC-------
Confidence 468999999999999 9999999885 899999999999999999999999999876 69999999874
Q ss_pred CHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHH
Q 030845 83 TSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGD 162 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (170)
+.+.+++|+ ++++++|+.+. .+.. ..+... +++..+|++||||++|++++++.|..+.+++.+.
T Consensus 91 ~~~~~~~~~-~~~~~~~~~~~-~d~~----~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 154 (168)
T 2b1k_A 91 DRQKAISWL-KELGNPYALSL-FDGD----GMLGLD----------LGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEE 154 (168)
T ss_dssp CHHHHHHHH-HHHCCCCSEEE-EETT----CHHHHH----------HTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHT
T ss_pred ChHHHHHHH-HHcCCCCceee-ECcc----hHHHHH----------cCccccCEEEEECCCCeEEEEEeCCCCHHHHHHH
Confidence 678899998 58899998532 1222 122322 3788899999999999999999998888889988
Q ss_pred HHHHhhc
Q 030845 163 IKNALGD 169 (170)
Q Consensus 163 l~~ll~~ 169 (170)
|++++++
T Consensus 155 l~~~l~~ 161 (168)
T 2b1k_A 155 IKPLWEK 161 (168)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 8888753
No 85
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.94 E-value=1.2e-26 Score=157.69 Aligned_cols=138 Identities=17% Similarity=0.220 Sum_probs=114.0
Q ss_pred CCCCCCcccceEeecCCC--------CeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCC
Q 030845 5 ESVPQKSIYEFTVKDSKG--------KDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQF 76 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G--------~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~ 76 (170)
....|..+|+|++.+.+| +.+++++++||++||+||++||++|..+++.|++++++ .++.+++|+++.
T Consensus 7 ~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~~~- 82 (156)
T 1kng_A 7 SALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGINYKD- 82 (156)
T ss_dssp -----CBCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEEESC-
T ss_pred hHHhCCCCCCceeeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEECCC-
Confidence 457889999999999999 99999999999999999999999999999999999876 349999999873
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCc-eeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCC
Q 030845 77 LKQEPGTSQEAHEFACTRYKAEYP-IFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTS 155 (170)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~ 155 (170)
+.+.+++|+ .+++++|+ +..| .. ..+... +++..+|++|+||++|+++.++.|..+
T Consensus 83 ------~~~~~~~~~-~~~~~~~~~~~~d--~~----~~~~~~----------~~v~~~P~~~~id~~G~i~~~~~g~~~ 139 (156)
T 1kng_A 83 ------AADNARRFL-GRYGNPFGRVGVD--AN----GRASIE----------WGVYGVPETFVVGREGTIVYKLVGPIT 139 (156)
T ss_dssp ------CHHHHHHHH-HHHCCCCSEEEEE--TT----SHHHHH----------TTCCSSCEEEEECTTSBEEEEEESCCC
T ss_pred ------CHHHHHHHH-HHcCCCCceeeeC--ch----hHHHHh----------cCcCccCeEEEEcCCCCEEEEEeCCCC
Confidence 688999998 58899999 4433 21 223332 478889999999999999999999888
Q ss_pred chhHHHHHHHHhhc
Q 030845 156 PMAIEGDIKNALGD 169 (170)
Q Consensus 156 ~~~~~~~l~~ll~~ 169 (170)
.+++.+.|++++++
T Consensus 140 ~~~l~~~l~~~l~~ 153 (156)
T 1kng_A 140 PDNLRSVLLPQMEK 153 (156)
T ss_dssp HHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 89999999888864
No 86
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.94 E-value=9.9e-28 Score=165.59 Aligned_cols=131 Identities=13% Similarity=0.141 Sum_probs=102.8
Q ss_pred CCCCCcccceEee-cCCCCeeecCcc-CCcEEEEEEe-cCCCCCchH-hHHHHHHHHHHhccCCe-EEEEeeCCCCCCCC
Q 030845 6 SVPQKSIYEFTVK-DSKGKDVDLSIY-KGKVLLIVNV-ASKCGFTDS-NYSQLTDLYNKYKHKGL-EILAFPCNQFLKQE 80 (170)
Q Consensus 6 ~~~~~~~p~f~l~-~~~G~~v~l~~~-~gk~~ll~f~-~~~C~~C~~-~~~~l~~~~~~~~~~~v-~vi~vs~d~~~~~~ 80 (170)
...|..+|+|+++ +.+|+.++|+++ +||++||+|| ++|||+|.. +++.|++++++++++|+ .+++||.|
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d------ 76 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVN------ 76 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESS------
T ss_pred CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCC------
Confidence 5678999999999 999999999998 9999999886 999999999 99999999999999999 99999976
Q ss_pred CCCHHHHHHHHHHhcCCC--CceeEEeecCCCCCchHHHHHhhhcC--CccCcccccCceEEEECCCCcEEEecCCC
Q 030845 81 PGTSQEAHEFACTRYKAE--YPIFQKVRVNGPNAEPLYKFLKASKT--GYFGSRIKWNFTKFLVDTEGNVIGRYSPT 153 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~p~~~lid~~G~i~~~~~g~ 153 (170)
+.+.+++|+ ++++++ ||++.|.+ + .+.+.+..... ...| .....|++||| ++|+|++++.+.
T Consensus 77 --~~~~~~~~~-~~~~~~~~fp~l~D~~--~----~~~~~~gv~~~~~~~~g-~~~~~p~t~lI-~~G~I~~~~~~~ 142 (167)
T 2wfc_A 77 --DSFVMDAWG-KAHGADDKVQMLADPG--G----AFTKAVDMELDLSAVLG-NVRSKRYSLVI-EDGVVTKVNVEP 142 (167)
T ss_dssp --CHHHHHHHH-HHTTCTTTSEEEECTT--S----HHHHHTTCEECCHHHHS-SCEECCEEEEE-ETTEEEEEEECT
T ss_pred --CHHHHHHHH-HhcCCCcceEEEECCC--C----cHHHHcCCccccccccC-cccceEEEEEE-eCCEEEEEEecC
Confidence 578899999 588998 99997632 2 12222110000 0000 01234899999 999999997653
No 87
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.94 E-value=6.2e-28 Score=168.93 Aligned_cols=134 Identities=13% Similarity=0.086 Sum_probs=102.6
Q ss_pred CCCCCCcccceEeecC--CC-CeeecCc-cCCcEE-EEEEecCCCCCchH-hHHHHHHHHHHhccCCeE-EEEeeCCCCC
Q 030845 5 ESVPQKSIYEFTVKDS--KG-KDVDLSI-YKGKVL-LIVNVASKCGFTDS-NYSQLTDLYNKYKHKGLE-ILAFPCNQFL 77 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~--~G-~~v~l~~-~~gk~~-ll~f~~~~C~~C~~-~~~~l~~~~~~~~~~~v~-vi~vs~d~~~ 77 (170)
....|..+|+|+|.+. +| +++++++ ++||++ |++||++|||+|.. +++.|++++++|+++|+. +++||.|
T Consensus 25 ~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d--- 101 (184)
T 3uma_A 25 TIAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN--- 101 (184)
T ss_dssp CCCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS---
T ss_pred cCCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC---
Confidence 3578999999999998 99 9999999 899855 45566999999999 799999999999999999 9999987
Q ss_pred CCCCCCHHHHHHHHHHhcCCC--CceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCC
Q 030845 78 KQEPGTSQEAHEFACTRYKAE--YPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPT 153 (170)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~ 153 (170)
+.+..++|+ ++++++ ||++.|.+ + .....|...... ...|.++...|++|||| +|+|++.+.+.
T Consensus 102 -----~~~~~~~f~-~~~~~~~~fp~l~D~~--~-~va~~yGv~~~~--~~~g~g~~~~r~tfiId-dG~I~~~~~~~ 167 (184)
T 3uma_A 102 -----DLHVMGAWA-THSGGMGKIHFLSDWN--A-AFTKAIGMEIDL--SAGTLGIRSKRYSMLVE-DGVVKALNIEE 167 (184)
T ss_dssp -----CHHHHHHHH-HHHTCTTTSEEEECTT--C-HHHHHTTCEEEE--GGGTCEEEECCEEEEEE-TTEEEEEEECS
T ss_pred -----CHHHHHHHH-HHhCCCCceEEEEcCc--h-HHHHHcCCceec--cccCCcccceeEEEEEC-CCEEEEEEEeC
Confidence 578889999 588998 99998633 2 122222111000 00111234568899996 99999998764
No 88
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.94 E-value=4.6e-27 Score=169.31 Aligned_cols=149 Identities=9% Similarity=0.110 Sum_probs=110.1
Q ss_pred CCCCCCcccceEeecCCCCeeecCccCCc--EEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDLSIYKGK--VLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPG 82 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l~~~~gk--~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~ 82 (170)
....|..+|+|++.+.+| .+++++++|| ++|++||++|||+|+.+++.|.+++++|+++|+++|+||+|
T Consensus 4 ~l~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D-------- 74 (224)
T 1prx_A 4 GLLLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSID-------- 74 (224)
T ss_dssp -CCTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESS--------
T ss_pred cCCCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCC--------
Confidence 357899999999999999 9999999887 55666689999999999999999999999999999999987
Q ss_pred CHHHHHHHHHHh----------cCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCC
Q 030845 83 TSQEAHEFACTR----------YKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSP 152 (170)
Q Consensus 83 ~~~~~~~~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g 152 (170)
+.+..++|+. + ++++||++.|.+ + .....|+..........++ ...+|++||||++|+|+.++.+
T Consensus 75 ~~~~~~~~~~-~i~~~~~~~~~~~~~fpil~D~~--~-~va~~ygv~~~~~~~~~g~-~~~~p~~fiID~~G~I~~~~~~ 149 (224)
T 1prx_A 75 SVEDHLAWSK-DINAYNSEEPTEKLPFPIIDDRN--R-ELAILLGMLDPAEKDEKGM-PVTARVVFVFGPDKKLKLSILY 149 (224)
T ss_dssp CHHHHHHHHH-HHHHHTTSCCCSCCSSCEEECTT--C-HHHHHTTSSCSCTTCSSSC-CTTCCEEEEECTTSBEEEEEEC
T ss_pred CHHHHHHHHH-HHHHhhCcccccCcCcceeecCc--h-HHHHHhCCCCcccccCCCc-cccceEEEEECCCCEEEEEEec
Confidence 4667777773 3 789999997532 1 1222222211000000011 1236899999999999999865
Q ss_pred C----CCchhHHHHHHHHh
Q 030845 153 T----TSPMAIEGDIKNAL 167 (170)
Q Consensus 153 ~----~~~~~~~~~l~~ll 167 (170)
. .+.+++.+.|+.|.
T Consensus 150 ~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 150 PATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp CTTBCCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHH
Confidence 3 24677888887764
No 89
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.94 E-value=3.6e-27 Score=170.59 Aligned_cols=149 Identities=11% Similarity=0.167 Sum_probs=111.6
Q ss_pred CCCCCcccceEeecCCCCeeecCccCCc-EEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCC
Q 030845 6 SVPQKSIYEFTVKDSKGKDVDLSIYKGK-VLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGT 83 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~v~l~~~~gk-~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~ 83 (170)
...|..+|+|++.+.+| .+++++++|| ++||+|| ++|||+|+.+++.|.+++++|+++|+++|+||+| +
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D--------~ 73 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCD--------N 73 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS--------C
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCC--------C
Confidence 56889999999999999 8999999997 9999998 9999999999999999999999999999999987 5
Q ss_pred HHHHHHHHHH-----hc--CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCC---
Q 030845 84 SQEAHEFACT-----RY--KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPT--- 153 (170)
Q Consensus 84 ~~~~~~~~~~-----~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~--- 153 (170)
.+..++|++. ++ +++||++.|. .+ .....|...........++ ...+|++||||++|+|++++.+.
T Consensus 74 ~~~~~~~~~~i~~~~~~~~~~~fpil~D~--~~-~va~~ygv~~~~~~~~~g~-~~~~p~~fiID~~G~I~~~~~~~~~~ 149 (233)
T 2v2g_A 74 VADHKEWSEDVKCLSGVKGDMPYPIIADE--TR-ELAVKLGMVDPDERTSTGM-PLTCRAVFIIGPDKKLKLSILYPATT 149 (233)
T ss_dssp HHHHHHHHHHHHHHHTCCSSCSSCEEECT--TC-HHHHHTTCEEEEEECTTCC-EEECEEEEEECTTSBEEEEEEECTTB
T ss_pred HHHHHHHHHHHHHhhCcccCCceEEEECC--hH-HHHHHhCCcCcccccCCCc-ccccceEEEECCCCEEEEEEecCCCC
Confidence 6777788742 46 8899999752 21 1222222111000000011 12468999999999999987542
Q ss_pred -CCchhHHHHHHHHh
Q 030845 154 -TSPMAIEGDIKNAL 167 (170)
Q Consensus 154 -~~~~~~~~~l~~ll 167 (170)
.+.+++.+.|+.|.
T Consensus 150 gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 150 GRNFSEILRVIDSLQ 164 (233)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 24567777777664
No 90
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.94 E-value=1.5e-25 Score=160.30 Aligned_cols=145 Identities=14% Similarity=0.085 Sum_probs=108.5
Q ss_pred CCCCCCCcccceEeecCCCCeeecCccCCcEEEEEEecCC-CCCch-----HhHHHHHHHHHHhccCCeEEEEeeCCCCC
Q 030845 4 SESVPQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASK-CGFTD-----SNYSQLTDLYNKYKHKGLEILAFPCNQFL 77 (170)
Q Consensus 4 ~~~~~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~-C~~C~-----~~~~~l~~~~~~~~~~~v~vi~vs~d~~~ 77 (170)
.....|..+|+|+|++.+|+.++|++++||++||+||++| ||+|. .+++.|.++ + .|+.|++||.|
T Consensus 20 ~~l~vG~~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~D--- 91 (224)
T 3keb_A 20 DFPRKGDYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVD--- 91 (224)
T ss_dssp CCCCTTCBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESS---
T ss_pred CcCCCCCCCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECC---
Confidence 4567899999999999999999999999999999999887 99999 888888877 5 67999999986
Q ss_pred CCCCCCHHHHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCC----
Q 030845 78 KQEPGTSQEAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSP---- 152 (170)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g---- 152 (170)
+....++|+ +++++ +||+++|. ........|....... .. .++ ..|++||||++|+|++++..
T Consensus 92 -----s~~~~~~f~-~~~gl~~fplLsD~--~~~~vak~yGv~~~~~-~~--~G~-~~p~tfvID~dG~I~~~~~~~~~~ 159 (224)
T 3keb_A 92 -----SPSSLARAR-HEHGLPNIALLSTL--RGRDFHKRYGVLITEY-PL--SGY-TSPAIILADAANVVHYSERLANTR 159 (224)
T ss_dssp -----CHHHHHHHH-HHHCCTTCEEEEST--TCTTHHHHTTCBCCST-TS--TTC-BCCEEEEECTTCBEEEEEECSBTT
T ss_pred -----CHHHHHHHH-HHcCCCCceEEEcC--CchHHHHHhCCccccc-cc--cCC-ccCEEEEEcCCCEEEEEEecCCCC
Confidence 688899999 58899 79999863 1122222222111000 00 011 26899999999999998632
Q ss_pred -CCCchhHHHHHHHHhh
Q 030845 153 -TTSPMAIEGDIKNALG 168 (170)
Q Consensus 153 -~~~~~~~~~~l~~ll~ 168 (170)
..+.+++.+.|+.+.+
T Consensus 160 ~~pd~~evl~~L~~l~~ 176 (224)
T 3keb_A 160 DFFDFDAIEKLLQEGEQ 176 (224)
T ss_dssp CCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhhh
Confidence 3456677777777653
No 91
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.94 E-value=8.3e-27 Score=167.57 Aligned_cols=149 Identities=15% Similarity=0.175 Sum_probs=108.9
Q ss_pred CCCCCcccceEeecC--CCCeeecCccCCc-EE-EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCC
Q 030845 6 SVPQKSIYEFTVKDS--KGKDVDLSIYKGK-VL-LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEP 81 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~--~G~~v~l~~~~gk-~~-ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~ 81 (170)
...|..+|+|++.+. +| .+++++++|| ++ |++||++|||+|+.+++.|++++++|+++|+++|+||+|
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D------- 74 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCN------- 74 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESS-------
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCC-------
Confidence 568899999999999 99 8999999998 54 455589999999999999999999999999999999987
Q ss_pred CCHHHHHHHHH------HhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCC--
Q 030845 82 GTSQEAHEFAC------TRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPT-- 153 (170)
Q Consensus 82 ~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~-- 153 (170)
+.+..++|+. .+++++||++.|. .+ .....|..+........++ ....|++||||++|+|++++.+.
T Consensus 75 -~~~~~~~~~~~i~~~~~~~~~~fpil~D~--~~-~va~~ygv~~~~~~~~~g~-~~~~p~~flID~~G~I~~~~~~~~~ 149 (220)
T 1xcc_A 75 -SKESHDKWIEDIKYYGKLNKWEIPIVCDE--SR-ELANKLKIMDEQEKDITGL-PLTCRCLFFISPEKKIKATVLYPAT 149 (220)
T ss_dssp -CHHHHHHHHHHHHHHHTCSCCCCCEEECT--TS-HHHHHHTCEEEEEECTTSC-EEECEEEEEECTTSBEEEEEEECTT
T ss_pred -CHHHHHHHHHHHHHHhcCCCCcceeEECc--hh-HHHHHhCCCCcccccCCCC-CcccceEEEECCCCEEEEEEecCCC
Confidence 4666667763 1578999999752 21 1222232211000000011 12468999999999999997542
Q ss_pred --CCchhHHHHHHHHh
Q 030845 154 --TSPMAIEGDIKNAL 167 (170)
Q Consensus 154 --~~~~~~~~~l~~ll 167 (170)
.+.+++.+.|+.|.
T Consensus 150 ~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 150 TGRNAHEILRVLKSLQ 165 (220)
T ss_dssp BCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 35677888887764
No 92
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.93 E-value=2.6e-26 Score=163.52 Aligned_cols=147 Identities=16% Similarity=0.176 Sum_probs=111.0
Q ss_pred CCCCCCCCCcccceE----eecCCCCeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCC
Q 030845 2 GASESVPQKSIYEFT----VKDSKGKDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQF 76 (170)
Q Consensus 2 ~~~~~~~~~~~p~f~----l~~~~G~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~ 76 (170)
.......|.++|+|+ +.|.+|+.++|++++||++||+|| +.|||.|+.++..|++.+++|+++|+++++||.|
T Consensus 22 ~~~~~~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~D-- 99 (219)
T 3tue_A 22 SCGNAKINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSID-- 99 (219)
T ss_dssp --CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESS--
T ss_pred cccccccCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCC--
Confidence 334457899999999 557789999999999999999999 8899999999999999999999999999999987
Q ss_pred CCCCCCCHHHHHHHHHHh------cCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEec
Q 030845 77 LKQEPGTSQEAHEFACTR------YKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRY 150 (170)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~ 150 (170)
+....++|+... .+++||+++|.+.+ ....|..+.... +... ..+||||++|+|++.+
T Consensus 100 ------s~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~---va~~yGv~~~~~----g~~~---R~tFiIDp~g~Ir~~~ 163 (219)
T 3tue_A 100 ------SEYAHLQWTLQDRKKGGLGTMAIPILADKTKN---IARSYGVLEESQ----GVAY---RGLFIIDPHGMLRQIT 163 (219)
T ss_dssp ------CHHHHHHHHHSCGGGTCCCSCSSCEEECTTSH---HHHHTTCEETTT----TEEC---EEEEEECTTSBEEEEE
T ss_pred ------chhhHHHHhhhhHHhcCccccccccccCcccH---HHHHcCCcccCC----CeeE---EEEEEECCCCeEEEEE
Confidence 688888898321 25789999874422 233333332111 1122 4789999999999876
Q ss_pred CC----CCCchhHHHHHHHH
Q 030845 151 SP----TTSPMAIEGDIKNA 166 (170)
Q Consensus 151 ~g----~~~~~~~~~~l~~l 166 (170)
.. ..+.+++.+.|+.|
T Consensus 164 ~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 164 VNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp EECTTCCCCHHHHHHHHHHH
T ss_pred EecCCCCCCHHHHHHHHHHh
Confidence 22 22556677777655
No 93
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4.9e-26 Score=161.76 Aligned_cols=142 Identities=13% Similarity=0.141 Sum_probs=109.2
Q ss_pred CCCCCcccceEee---cCCCCeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCC
Q 030845 6 SVPQKSIYEFTVK---DSKGKDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEP 81 (170)
Q Consensus 6 ~~~~~~~p~f~l~---~~~G~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~ 81 (170)
...|.++|+|+++ |.+|+.++|++++||++||+|| +.|||.|+.+++.|++.+++|+++|+++++||+|
T Consensus 23 ~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~D------- 95 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTD------- 95 (216)
T ss_dssp CCTTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESS-------
T ss_pred hhcCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecC-------
Confidence 3578999999976 5677899999999999999999 8899999999999999999999999999999987
Q ss_pred CCHHHHHHHHHHhc-------CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCC--
Q 030845 82 GTSQEAHEFACTRY-------KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSP-- 152 (170)
Q Consensus 82 ~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g-- 152 (170)
+....++|+. .. +++||+++|.+. .....|..+.... ++ ..+.+||||++|+|++....
T Consensus 96 -s~~sh~aw~~-~~~~~~~~~~l~fpllsD~~~---~vak~YGv~~~~~------g~-~~R~tFiID~~G~Ir~~~v~~~ 163 (216)
T 3sbc_A 96 -SEYSLLAWTN-IPRKEGGLGPINIPLLADTNH---SLSRDYGVLIEEE------GV-ALRGLFIIDPKGVIRHITINDL 163 (216)
T ss_dssp -CHHHHHHHHT-SCGGGTCCCSCSSCEEECTTS---HHHHHHTCEETTT------TE-ECEEEEEECTTSBEEEEEEECT
T ss_pred -chhhHHHHHH-HHHHhCCccCcccceEeCCCC---HHHHHcCCeeccC------Cc-eeeEEEEECCCCeEEEEEEcCC
Confidence 6888888883 33 478999986432 2233343322111 12 23689999999999987522
Q ss_pred --CCCchhHHHHHHHH
Q 030845 153 --TTSPMAIEGDIKNA 166 (170)
Q Consensus 153 --~~~~~~~~~~l~~l 166 (170)
..+.+++.+.|+.|
T Consensus 164 ~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 164 PVGRNVDEALRLVEAF 179 (216)
T ss_dssp TBCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHh
Confidence 22556677776654
No 94
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.93 E-value=1.1e-25 Score=164.04 Aligned_cols=145 Identities=15% Similarity=0.208 Sum_probs=109.5
Q ss_pred CCCCCCcccceEeecCCCCeeec-Ccc--CCcEE-EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCC
Q 030845 5 ESVPQKSIYEFTVKDSKGKDVDL-SIY--KGKVL-LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQE 80 (170)
Q Consensus 5 ~~~~~~~~p~f~l~~~~G~~v~l-~~~--~gk~~-ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~ 80 (170)
....|..+|+|++.+.+| .+++ +++ +||++ |++||++||++|+.+++.|.+++++|+++|+++|+||+|
T Consensus 4 ~~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~D------ 76 (249)
T 3a2v_A 4 IPLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVD------ 76 (249)
T ss_dssp ECCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS------
T ss_pred cCCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECC------
Confidence 356789999999999999 7999 999 99965 457789999999999999999999999999999999987
Q ss_pred CCCHHHHHHHHHH-----hcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCC-
Q 030845 81 PGTSQEAHEFACT-----RYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTT- 154 (170)
Q Consensus 81 ~~~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~- 154 (170)
+.....+|... ..+++||++.|.+ + .+...+...... .++..+|++||||++|+|+.+..|..
T Consensus 77 --s~~~~~~w~~~~~~~~~~~i~fPil~D~~--~----~ia~~ygv~~~~---~g~~~~p~~fIID~dG~I~~~~~~~~~ 145 (249)
T 3a2v_A 77 --SVFSHIKWKEWIERHIGVRIPFPIIADPQ--G----TVARRLGLLHAE---SATHTVRGVFIVDARGVIRTMLYYPME 145 (249)
T ss_dssp --CHHHHHHHHHHHHHHTCCCCCSCEEECTT--S----HHHHHHTCCCTT---CSSSCCEEEEEECTTSBEEEEEEECTT
T ss_pred --CHHHHHHHHHHHHHhcCCCCceeEEECCc--h----HHHHHhCCcccc---CCCcccceEEEECCCCeEEEEEecCCc
Confidence 45666666631 2478999997522 1 222222111000 02226799999999999999976543
Q ss_pred ---CchhHHHHHHHHh
Q 030845 155 ---SPMAIEGDIKNAL 167 (170)
Q Consensus 155 ---~~~~~~~~l~~ll 167 (170)
+.+++.+.|+++.
T Consensus 146 ~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 146 LGRLVDEILRIVKALK 161 (249)
T ss_dssp BCCCHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHH
Confidence 4677888887764
No 95
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.93 E-value=6.1e-26 Score=165.07 Aligned_cols=133 Identities=17% Similarity=0.205 Sum_probs=103.9
Q ss_pred CCCCCcccceEeecC-CCC--eeecCc-cCCcEEEEEEe-cCCCCCch-HhHHHHHHHHHHhccCCe-EEEEeeCCCCCC
Q 030845 6 SVPQKSIYEFTVKDS-KGK--DVDLSI-YKGKVLLIVNV-ASKCGFTD-SNYSQLTDLYNKYKHKGL-EILAFPCNQFLK 78 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~-~G~--~v~l~~-~~gk~~ll~f~-~~~C~~C~-~~~~~l~~~~~~~~~~~v-~vi~vs~d~~~~ 78 (170)
...|..+|+|+|++. +|+ .+++++ ++||++||+|| ++|||+|+ .+++.|++++++|+++|+ .+++||.|
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d---- 78 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVN---- 78 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESS----
T ss_pred ccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcC----
Confidence 567899999999996 787 899999 89999999999 99999999 999999999999999999 99999986
Q ss_pred CCCCCHHHHHHHHHHhcCCC-CceeEEeecCCCCCchHHHHHhhhcC-CccCcccccCceEEEECCCCcEEEecCCCC
Q 030845 79 QEPGTSQEAHEFACTRYKAE-YPIFQKVRVNGPNAEPLYKFLKASKT-GYFGSRIKWNFTKFLVDTEGNVIGRYSPTT 154 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~p~~~lid~~G~i~~~~~g~~ 154 (170)
+.+..++|+ ++++.+ ||++.|.+ + .+.+.++.... ...|.+....|++||| ++|+|++++.|..
T Consensus 79 ----~~~~~~~~~-~~~~~~~~~~l~D~~--~----~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~ 144 (241)
T 1nm3_A 79 ----DTFVMNAWK-EDEKSENISFIPDGN--G----EFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPN 144 (241)
T ss_dssp ----CHHHHHHHH-HHTTCTTSEEEECTT--S----HHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCS
T ss_pred ----CHHHHHHHH-HhcCCCceEEEECCC--c----HHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEecc
Confidence 578889999 578886 99997632 1 12222211100 0011112245899999 9999999987753
No 96
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.92 E-value=2.2e-26 Score=159.42 Aligned_cols=133 Identities=14% Similarity=0.155 Sum_probs=98.5
Q ss_pred CCCCcccceEeecC----CC-----CeeecCcc-CCc-EEEEEEecCCCCCchHh-HHHHHHHHHHhccCCeE-EEEeeC
Q 030845 7 VPQKSIYEFTVKDS----KG-----KDVDLSIY-KGK-VLLIVNVASKCGFTDSN-YSQLTDLYNKYKHKGLE-ILAFPC 73 (170)
Q Consensus 7 ~~~~~~p~f~l~~~----~G-----~~v~l~~~-~gk-~~ll~f~~~~C~~C~~~-~~~l~~~~~~~~~~~v~-vi~vs~ 73 (170)
..|..+|+|++.+. +| +.++++++ +|| ++|++||++|||+|..+ ++.|++++++|+++|+. +++||.
T Consensus 8 ~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~ 87 (171)
T 2pwj_A 8 DILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAI 87 (171)
T ss_dssp --CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEES
T ss_pred cccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 45669999999998 57 89999996 995 77778899999999999 99999999999988999 999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCC--CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecC
Q 030845 74 NQFLKQEPGTSQEAHEFACTRYKA--EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYS 151 (170)
Q Consensus 74 d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~ 151 (170)
| +.+..++|+ +++++ +||++.|.+ +. ....|..... ....+.++...|++|+|| +|+|++.+.
T Consensus 88 d--------~~~~~~~~~-~~~~~~~~fp~l~D~~--~~-~~~~ygv~~~--~~~~~~g~~~~~~t~~I~-~G~I~~~~~ 152 (171)
T 2pwj_A 88 N--------DPYTVNAWA-EKIQAKDAIEFYGDFD--GS-FHKSLELTTD--LSAGLLGIRSERWSAYVV-DGKVKALNV 152 (171)
T ss_dssp S--------CHHHHHHHH-HHTTCTTTSEEEECTT--CH-HHHHHTCEEE--CTTTTCCEEECCEEEEEE-TTEEEEEEE
T ss_pred C--------CHHHHHHHH-HHhCCCCceEEEECCc--cH-HHHHhCCccc--cccccCCcccceeEEEEE-CCEEEEEEe
Confidence 6 577889998 57785 799997532 21 2222221100 000111233457889999 999999987
Q ss_pred CCC
Q 030845 152 PTT 154 (170)
Q Consensus 152 g~~ 154 (170)
|..
T Consensus 153 ~~~ 155 (171)
T 2pwj_A 153 EES 155 (171)
T ss_dssp CSS
T ss_pred ecC
Confidence 643
No 97
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.92 E-value=2.8e-25 Score=167.70 Aligned_cols=133 Identities=11% Similarity=0.174 Sum_probs=102.1
Q ss_pred CcccceEeecCCCCeeecCccCCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHH
Q 030845 10 KSIYEFTVKDSKGKDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAH 88 (170)
Q Consensus 10 ~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~ 88 (170)
.++|+|+|++.+|++++|++++||++||+|| +.|||.|..+++.|++ ...+++++++||.| +.+..+
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~D--------~~~~~~ 69 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISRD--------SVEALK 69 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEESC--------CHHHHH
T ss_pred CCCCCcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeCC--------CHHHHH
Confidence 5799999999999999999999999999999 6799999999988864 23357999999976 688899
Q ss_pred HHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCC---chhHHHHHHH
Q 030845 89 EFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTS---PMAIEGDIKN 165 (170)
Q Consensus 89 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~---~~~~~~~l~~ 165 (170)
+|+ ++++++||+++|.+ + .....|+.+ + .-...|++||||++|+|++.+.+... .+++.+.|++
T Consensus 70 ~f~-~~~~l~fp~l~D~~--~-~v~~~ygv~--------~-~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~ 136 (322)
T 4eo3_A 70 RFK-EKNDLKVTLLSDPE--G-ILHEFFNVL--------E-NGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDR 136 (322)
T ss_dssp HHH-HHHTCCSEEEECTT--C-HHHHHTTCE--------E-TTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHH
T ss_pred HHH-HhhCCceEEEEcCc--h-HHHHhcCCC--------C-CCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhh
Confidence 999 68999999998633 2 122222111 0 11345899999999999988866433 3556666666
Q ss_pred Hh
Q 030845 166 AL 167 (170)
Q Consensus 166 ll 167 (170)
+.
T Consensus 137 ~~ 138 (322)
T 4eo3_A 137 LI 138 (322)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 98
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.86 E-value=1.2e-26 Score=155.48 Aligned_cols=121 Identities=13% Similarity=0.152 Sum_probs=97.7
Q ss_pred CcccceEeecCCCCeeecCc-cCCc-EEEEEEecCCCCCchHhHHHHHHHHHHhcc--CCeEEEEeeCCCCCCCCCCCHH
Q 030845 10 KSIYEFTVKDSKGKDVDLSI-YKGK-VLLIVNVASKCGFTDSNYSQLTDLYNKYKH--KGLEILAFPCNQFLKQEPGTSQ 85 (170)
Q Consensus 10 ~~~p~f~l~~~~G~~v~l~~-~~gk-~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~--~~v~vi~vs~d~~~~~~~~~~~ 85 (170)
..+|+|+|.+.+|+.+++++ ++|| ++||+||++|||+|+.+++.|+++++++++ .++.+++|++|. +.+
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~-------~~~ 74 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDR-------SED 74 (143)
Confidence 35899999999999999999 9999 999999999999999999999999999953 479999999874 567
Q ss_pred HHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecC
Q 030845 86 EAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYS 151 (170)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~ 151 (170)
.+++|+ ++++++|+.+......... +... +++..+|+++|||++|+++.+..
T Consensus 75 ~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~----------~~v~~~P~~~lid~~G~i~~~~~ 126 (143)
T 2lus_A 75 DMFQYM-MESHGDWLAIPYRSGPASN---VTAK----------YGITGIPALVIVKKDGTLISMNG 126 (143)
Confidence 888898 5788887765321111111 1111 47888899999999999999853
No 99
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.92 E-value=6e-25 Score=147.64 Aligned_cols=120 Identities=20% Similarity=0.234 Sum_probs=97.2
Q ss_pred CCCcccc-eEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhcc-CCeEEEEeeCCCCCCCCCCCHH
Q 030845 8 PQKSIYE-FTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKH-KGLEILAFPCNQFLKQEPGTSQ 85 (170)
Q Consensus 8 ~~~~~p~-f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~v~vi~vs~d~~~~~~~~~~~ 85 (170)
.+..+|+ |++.+.+|+.+++++++||++||+||++||++|+.+++.|+++++++++ .++.+++|++|. +.+
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~-------~~~ 75 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDE-------SAE 75 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS-------SHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC-------CHH
Confidence 4577899 9999999999999999999999999999999999999999999999985 589999999884 678
Q ss_pred HHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEEC-CCCcEEEec
Q 030845 86 EAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVD-TEGNVIGRY 150 (170)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid-~~G~i~~~~ 150 (170)
.+++|+ ++++. .+|+... + ....+.+. +++..+|+++||| ++|+++.++
T Consensus 76 ~~~~~~-~~~~~~~~~~~~~-d----~~~~~~~~----------~~v~~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 76 DFKDYY-AKMPWLALPFEDR-K----GMEFLTTG----------FDVKSIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp HHHHHH-TTCSSEECCTTCH-H----HHHHHHHH----------TTCCSSSEEEEEETTTCCEEESC
T ss_pred HHHHHH-HhCCccccccCch-H----HHHHHHHH----------cCCCCCCEEEEEECCCCcEEecc
Confidence 899998 45442 3443310 0 01122222 4788899999999 999999875
No 100
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.91 E-value=6.2e-25 Score=151.19 Aligned_cols=120 Identities=18% Similarity=0.224 Sum_probs=96.5
Q ss_pred CCCCcccce-EeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhcc-CCeEEEEeeCCCCCCCCCCCH
Q 030845 7 VPQKSIYEF-TVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKH-KGLEILAFPCNQFLKQEPGTS 84 (170)
Q Consensus 7 ~~~~~~p~f-~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~v~vi~vs~d~~~~~~~~~~ 84 (170)
..|..+|+| ++.+.+| .+++++++||++||+||++||++|+.+++.|.++++++++ .++.+++|++|. +.
T Consensus 23 ~vG~~~P~f~~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~-------~~ 94 (165)
T 3s9f_A 23 GVAKHLGEALKLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDE-------EE 94 (165)
T ss_dssp HHHHHHHHTSCEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC-------SH
T ss_pred hhcccCCcceeeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCC-------CH
Confidence 356789999 9999999 9999999999999999999999999999999999999987 689999999984 67
Q ss_pred HHHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCC-CcEEEec
Q 030845 85 QEAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTE-GNVIGRY 150 (170)
Q Consensus 85 ~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~-G~i~~~~ 150 (170)
+.+++|++ +++. .+++..+ .....+... +++..+|++||||++ |+|+.+.
T Consensus 95 ~~~~~~~~-~~~~~~~~~~~~-----~~~~~l~~~----------~~v~~~Pt~~lid~~~G~iv~~~ 146 (165)
T 3s9f_A 95 DDFNAYYA-KMPWLSIPFANR-----NIVEALTKK----------YSVESIPTLIGLNADTGDTVTTR 146 (165)
T ss_dssp HHHHHHHT-TCSSEECCTTCH-----HHHHHHHHH----------TTCCSSSEEEEEETTTCCEEESC
T ss_pred HHHHHHHH-hCCCcccccCch-----hHHHHHHHH----------cCCCCCCEEEEEeCCCCEEEecc
Confidence 88899984 4432 2332210 000122222 578889999999998 9999875
No 101
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.91 E-value=2.4e-24 Score=145.08 Aligned_cols=119 Identities=19% Similarity=0.269 Sum_probs=96.0
Q ss_pred CCCcccc-eEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhcc-CCeEEEEeeCCCCCCCCCCCHH
Q 030845 8 PQKSIYE-FTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKH-KGLEILAFPCNQFLKQEPGTSQ 85 (170)
Q Consensus 8 ~~~~~p~-f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~v~vi~vs~d~~~~~~~~~~~ 85 (170)
.+..+|+ |++.+.+| .+++++++||++||+||++||++|+.+++.|+++++++++ .++.+++|++|. +.+
T Consensus 4 ~~~~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~-------~~~ 75 (146)
T 1o8x_A 4 LDKYLPGIEKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDE-------EED 75 (146)
T ss_dssp GGGTSTTCCEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC-------SHH
T ss_pred hHhhCCCceEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCC-------CHH
Confidence 4667999 99999999 9999999999999999999999999999999999999984 689999999884 678
Q ss_pred HHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEEC-CCCcEEEec
Q 030845 86 EAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVD-TEGNVIGRY 150 (170)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid-~~G~i~~~~ 150 (170)
.+++|+. +++. .+++... + ....+.+. +++..+|+++|+| ++|+++.+.
T Consensus 76 ~~~~~~~-~~~~~~~~~~~~-d----~~~~~~~~----------~~v~~~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 76 GFAGYFA-KMPWLAVPFAQS-E----AVQKLSKH----------FNVESIPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp HHHHHHT-TCSSEECCGGGH-H----HHHHHHHH----------TTCCSSSEEEEEETTTCCEEESC
T ss_pred HHHHHHH-HCCceeeccchh-h----HHHHHHHH----------hCCCCCCEEEEEECCCCeEEEec
Confidence 8999984 5442 3443310 0 01122222 4788899999999 999999875
No 102
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.90 E-value=3.4e-24 Score=143.79 Aligned_cols=120 Identities=19% Similarity=0.240 Sum_probs=95.3
Q ss_pred CCCCcccce-EeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhc-cCCeEEEEeeCCCCCCCCCCCH
Q 030845 7 VPQKSIYEF-TVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYK-HKGLEILAFPCNQFLKQEPGTS 84 (170)
Q Consensus 7 ~~~~~~p~f-~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~v~vi~vs~d~~~~~~~~~~ 84 (170)
..|..+|+| ++.+.+| .+++++++||++||+||++||++|+.+++.|.+++++++ +.++.+++|++|. +.
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~-------~~ 74 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDE-------NE 74 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS-------SH
T ss_pred chhhhCccceEeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC-------CH
Confidence 346789997 9999999 999999999999999999999999999999999999998 4589999999884 67
Q ss_pred HHHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEEC-CCCcEEEec
Q 030845 85 QEAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVD-TEGNVIGRY 150 (170)
Q Consensus 85 ~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid-~~G~i~~~~ 150 (170)
+.+++|++ +++. .+++.. ......+.+. +++..+|+++|+| ++|+++.+.
T Consensus 75 ~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~----------~~v~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 75 SDFHDYYG-KMPWLALPFDQ-----RSTVSELGKT----------FGVESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp HHHHHHHT-TCSSEECCTTC-----HHHHHHHHHH----------HTCCSSSEEEEEETTTCCEEESC
T ss_pred HHHHHHHH-hCCceEeeccc-----hhHHHHHHHH----------cCCCCCCEEEEEECCCCeEEecc
Confidence 78889984 4432 233221 0001122222 4788899999999 899999875
No 103
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.87 E-value=3.5e-22 Score=137.63 Aligned_cols=135 Identities=12% Similarity=0.125 Sum_probs=102.2
Q ss_pred CCCCCCCCcccceEeecCCC--CeeecCcc-CCcEEEEEEe-cCCCCCchHhHHHHHHHHHHhccCCeE-EEEeeCCCCC
Q 030845 3 ASESVPQKSIYEFTVKDSKG--KDVDLSIY-KGKVLLIVNV-ASKCGFTDSNYSQLTDLYNKYKHKGLE-ILAFPCNQFL 77 (170)
Q Consensus 3 ~~~~~~~~~~p~f~l~~~~G--~~v~l~~~-~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~-vi~vs~d~~~ 77 (170)
+++...|.++|+|+|.+ +| +.++|+++ +||++||+|+ ..|||.|..+++.+++.+++++++|++ |++||+|
T Consensus 11 ~~~~~vGd~aPdf~l~~-~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D--- 86 (171)
T 2xhf_A 11 GSPIKVGDIIPDVLVYE-DVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVN--- 86 (171)
T ss_dssp CCCCCTTCBCCCCEEEC-SSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESS---
T ss_pred CCcccCcCCCCCeEEec-CCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCC---
Confidence 35678999999999994 44 89999994 9999999888 779999999999999999999999996 9999987
Q ss_pred CCCCCCHHHHHHHHHHhcCC--CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCC
Q 030845 78 KQEPGTSQEAHEFACTRYKA--EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPT 153 (170)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~ 153 (170)
+....++|+ ++.+. +|++++|.+. .....|....... .+|.+......+|||| +|+|++.+...
T Consensus 87 -----~~~~~~~w~-~~~~~~~~f~lLSD~~~---~~a~ayGv~~~~~--~~g~g~~~~R~tfvId-dG~V~~~~v~~ 152 (171)
T 2xhf_A 87 -----DPFVMAAWG-KTVDPEHKIRMLADMHG---EFTRALGTELDSS--KMLGNNRSRRYAMLID-DNKIRSVSTEP 152 (171)
T ss_dssp -----CHHHHHHHH-HHHCTTCCSEEEECTTS---HHHHHHTCBCCCH--HHHSSCCBCCEEEEEE-TTEEEEEEETT
T ss_pred -----CHHHHHHHH-HhcCCCCCeEEEEeCCc---hHHHHhCCceecc--ccCCCcceEEEEEEEe-CCEEEEEEEeC
Confidence 788999999 57788 8999987432 2222332221100 0011122235789998 99999998653
No 104
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.87 E-value=1.5e-22 Score=139.71 Aligned_cols=133 Identities=8% Similarity=0.017 Sum_probs=100.3
Q ss_pred CCCCCcccceEeecCCC----------CeeecCcc-CCcEEEE-EEecCCCCCchH-hHHHHHHHHHHhccCCe-EEEEe
Q 030845 6 SVPQKSIYEFTVKDSKG----------KDVDLSIY-KGKVLLI-VNVASKCGFTDS-NYSQLTDLYNKYKHKGL-EILAF 71 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~~G----------~~v~l~~~-~gk~~ll-~f~~~~C~~C~~-~~~~l~~~~~~~~~~~v-~vi~v 71 (170)
...|+++|+++|....+ ++++|+++ +||++|| +||++|||.|.. +++.|.+.+++|+++|+ ++++|
T Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigI 89 (176)
T 4f82_A 10 IQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCV 89 (176)
T ss_dssp CCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 46889999999887544 66899997 9986555 566999999999 99999999999999999 99999
Q ss_pred eCCCCCCCCCCCHHHHHHHHHHhcCCC--CceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEe
Q 030845 72 PCNQFLKQEPGTSQEAHEFACTRYKAE--YPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGR 149 (170)
Q Consensus 72 s~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~ 149 (170)
|.| +....++|+ ++++++ ||+++|.+ + .....|...... ...|.++...+++||| ++|+|++.
T Consensus 90 S~D--------~~~~~~~f~-~~~~l~~~f~lLsD~~--~-~va~ayGv~~~~--~~~G~g~~s~R~tfII-~dG~I~~~ 154 (176)
T 4f82_A 90 SVN--------DAFVMGAWG-RDLHTAGKVRMMADGS--A-AFTHALGLTQDL--SARGMGIRSLRYAMVI-DGGVVKTL 154 (176)
T ss_dssp ESS--------CHHHHHHHH-HHTTCTTTSEEEECTT--C-HHHHHHTCEEEC--GGGTCCEEECCEEEEE-ETTEEEEE
T ss_pred eCC--------CHHHHHHHH-HHhCCCCCceEEEcCc--h-HHHHHhCCCccc--cccCCCcccccEEEEE-cCCEEEEE
Confidence 987 688999999 578888 99998632 2 222223221110 0112234445789999 99999999
Q ss_pred cCCC
Q 030845 150 YSPT 153 (170)
Q Consensus 150 ~~g~ 153 (170)
+.+.
T Consensus 155 ~~~~ 158 (176)
T 4f82_A 155 AVEA 158 (176)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8653
No 105
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.85 E-value=6.2e-22 Score=137.92 Aligned_cols=131 Identities=9% Similarity=0.093 Sum_probs=97.7
Q ss_pred CCCCcccceEeec--C---------CC----CeeecCc-cCCcEEEEEEe-cCCCCCch-HhHHHHHHHHHHh-ccCCeE
Q 030845 7 VPQKSIYEFTVKD--S---------KG----KDVDLSI-YKGKVLLIVNV-ASKCGFTD-SNYSQLTDLYNKY-KHKGLE 67 (170)
Q Consensus 7 ~~~~~~p~f~l~~--~---------~G----~~v~l~~-~~gk~~ll~f~-~~~C~~C~-~~~~~l~~~~~~~-~~~~v~ 67 (170)
..|.++|+|+|.+ . +| +.+++++ ++||++||+|+ +.|||.|. .+++.+++.++++ ++.|++
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~ 81 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD 81 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 4688999999998 4 77 7899998 69999888887 78999999 9999999999999 999995
Q ss_pred -EEEeeCCCCCCCCCCCHHHHHHHHHHhcCC-CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCc
Q 030845 68 -ILAFPCNQFLKQEPGTSQEAHEFACTRYKA-EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGN 145 (170)
Q Consensus 68 -vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~ 145 (170)
|++||.| +....++|+ ++++. +|++++|.+. .....|...... ..+|.++.....+|||| +|+
T Consensus 82 ~V~gvS~D--------~~~~~~~~~-~~~~~~~f~lLsD~~~---~~a~~yGv~~~~--~~~G~g~~~~R~tfvId-dG~ 146 (182)
T 1xiy_A 82 DIYCITNN--------DIYVLKSWF-KSMDIKKIKYISDGNS---SFTDSMNMLVDK--SNFFMGMRPWRFVAIVE-NNI 146 (182)
T ss_dssp EEEEEESS--------CHHHHHHHH-HHTTCCSSEEEECTTS---HHHHHTTCEEEC--GGGTCCEEECCEEEEEE-TTE
T ss_pred EEEEEeCC--------CHHHHHHHH-HHcCCCCceEEEeCch---HHHHHhCCceec--cccCCCCceEEEEEEEc-CCE
Confidence 9999987 688899998 57788 6999987332 222223221100 00121222346789999 999
Q ss_pred EEEecCC
Q 030845 146 VIGRYSP 152 (170)
Q Consensus 146 i~~~~~g 152 (170)
|++.+..
T Consensus 147 V~~~~v~ 153 (182)
T 1xiy_A 147 LVKMFQE 153 (182)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9998743
No 106
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.80 E-value=1.9e-19 Score=118.11 Aligned_cols=114 Identities=12% Similarity=0.066 Sum_probs=89.8
Q ss_pred CcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHH
Q 030845 10 KSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHE 89 (170)
Q Consensus 10 ~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~ 89 (170)
..+++++..+.+|........+||++||+||++||++|+.+.+.+.++.++++ .++.++.|+.+. +....
T Consensus 4 ~~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~---------d~~~~ 73 (126)
T 2l57_A 4 EGIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEE---------EKNID 73 (126)
T ss_dssp CCSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTS---------SHHHH
T ss_pred cccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCC---------CchHH
Confidence 34667777777776665666789999999999999999999999999999997 459999998321 01112
Q ss_pred HHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 90 FACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 90 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
.+ ++ +++..+|++++++++|+++.++.|..+.+++.+.|++++.
T Consensus 74 ~~-~~----------------------------------~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~ 117 (126)
T 2l57_A 74 LA-YK----------------------------------YDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGV 117 (126)
T ss_dssp HH-HH----------------------------------TTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCC
T ss_pred HH-HH----------------------------------cCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhc
Confidence 22 12 3566679999999999999999998888999999988764
No 107
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.79 E-value=3e-20 Score=123.44 Aligned_cols=117 Identities=12% Similarity=0.108 Sum_probs=89.4
Q ss_pred CCCCCcccceE-eecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHH---HHHHHHhccCCeEEEEeeCCCCCCCCC
Q 030845 6 SVPQKSIYEFT-VKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQL---TDLYNKYKHKGLEILAFPCNQFLKQEP 81 (170)
Q Consensus 6 ~~~~~~~p~f~-l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~vi~vs~d~~~~~~~ 81 (170)
...+...|+|. +.+.++....+++.+||++||+||++||++|+.+.+.+ .++.++++ ++.++.|+++.
T Consensus 4 ~~~~~~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~------ 75 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTA------ 75 (134)
T ss_dssp ------CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTT------
T ss_pred ccccccCCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCC------
Confidence 34566788888 66677777778888899999999999999999999998 89999886 49999998763
Q ss_pred CCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEE--EecCCCCCchhH
Q 030845 82 GTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVI--GRYSPTTSPMAI 159 (170)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~--~~~~g~~~~~~~ 159 (170)
..+.....+ ++ +++..+|+++++|++|+++ .++.|..+.+++
T Consensus 76 -~~~~~~~l~-~~----------------------------------~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l 119 (134)
T 2fwh_A 76 -NDAQDVALL-KH----------------------------------LNVLGLPTILFFDGQGQEHPQARVTGFMDAETF 119 (134)
T ss_dssp -CCHHHHHHH-HH----------------------------------TTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHH
T ss_pred -CcchHHHHH-HH----------------------------------cCCCCCCEEEEECCCCCEeeeeeeeeccCHHHH
Confidence 223334444 22 3566679999999999998 788998888888
Q ss_pred HHHHHHH
Q 030845 160 EGDIKNA 166 (170)
Q Consensus 160 ~~~l~~l 166 (170)
.+.|+++
T Consensus 120 ~~~l~~~ 126 (134)
T 2fwh_A 120 SAHLRDR 126 (134)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 8888764
No 108
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.79 E-value=1.3e-18 Score=116.22 Aligned_cols=105 Identities=19% Similarity=0.183 Sum_probs=87.4
Q ss_pred eecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcC
Q 030845 17 VKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYK 96 (170)
Q Consensus 17 l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
+.+.+|....++.++||++||+||++||++|+.+.|.+.++.+++++. +.++.|++|. .. ..+ .+
T Consensus 36 l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~-- 100 (141)
T 3hxs_A 36 IADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIYKVNVDK-------EP----ELA-RD-- 100 (141)
T ss_dssp TCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-HH--
T ss_pred hhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEEEEECCC-------CH----HHH-HH--
Confidence 456778888999999999999999999999999999999999999864 9999998763 22 222 22
Q ss_pred CCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 97 AEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 97 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
++|..+|++++++++|+++ ++.|..+.+++.+.|++++++
T Consensus 101 --------------------------------~~v~~~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 101 --------------------------------FGIQSIPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp --------------------------------TTCCSSSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTTC-
T ss_pred --------------------------------cCCCCcCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHHcc
Confidence 3566779999999999988 788888899999999998864
No 109
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.78 E-value=2.5e-19 Score=121.77 Aligned_cols=120 Identities=13% Similarity=0.070 Sum_probs=85.2
Q ss_pred ccceEeecCCCCeeecCccCCcEEEEEEe-cCCCCCchHhHHHH---HHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHH
Q 030845 12 IYEFTVKDSKGKDVDLSIYKGKVLLIVNV-ASKCGFTDSNYSQL---TDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEA 87 (170)
Q Consensus 12 ~p~f~l~~~~G~~v~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l---~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~ 87 (170)
.+.+.+ +..|+.+++++.+||++||+|| ++||++|+.+.|.| .++.+.+. .++.++.|+.+.. .
T Consensus 28 ~~~~~~-~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~vd~~~~-------~--- 95 (154)
T 2ju5_A 28 AANLQW-ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVEVDFPQK-------N--- 95 (154)
T ss_dssp CCCCCE-ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEEEECCSS-------C---
T ss_pred cCCCCC-CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEEecCccc-------c---
Confidence 334444 4457778888889999999999 99999999999999 77766553 3589999987631 1
Q ss_pred HHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCC--CchhHHHHHHH
Q 030845 88 HEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTT--SPMAIEGDIKN 165 (170)
Q Consensus 88 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~--~~~~~~~~l~~ 165 (170)
+++++.. +. ...+... +++..+|+++|+|++|+++.+. |.. +.+++.+.|++
T Consensus 96 --------~~~~~~~---~~----~~~l~~~----------~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~ 149 (154)
T 2ju5_A 96 --------HQPEEQR---QK----NQELKAQ----------YKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKS 149 (154)
T ss_dssp --------CCCHHHH---HH----HHHHHHH----------TTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHH
T ss_pred --------CCChhhH---hh----HHHHHHH----------cCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHH
Confidence 0111100 00 0011111 4677889999999999999999 877 78889999998
Q ss_pred Hhhc
Q 030845 166 ALGD 169 (170)
Q Consensus 166 ll~~ 169 (170)
++++
T Consensus 150 ~l~~ 153 (154)
T 2ju5_A 150 ALKL 153 (154)
T ss_dssp HHTC
T ss_pred HHhc
Confidence 8864
No 110
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.74 E-value=9.7e-18 Score=110.31 Aligned_cols=106 Identities=15% Similarity=0.175 Sum_probs=81.9
Q ss_pred CcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHH
Q 030845 10 KSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHE 89 (170)
Q Consensus 10 ~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~ 89 (170)
.++|+++ +.+++.++....+||+++|.||++||++|+.+.+.+.++.+++++ ++.++.|++|. .. .
T Consensus 22 ~~~~~~~--~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~-------~~----~ 87 (128)
T 3ul3_B 22 KKVPRLQ--QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDK-------NE----S 87 (128)
T ss_dssp ----CCC--CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGG-------CH----H
T ss_pred ccCCccc--cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC-------CH----H
Confidence 4456655 556666777778999999999999999999999999999999985 49999998763 11 2
Q ss_pred HHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHH
Q 030845 90 FACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKN 165 (170)
Q Consensus 90 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ 165 (170)
.+ ++ ++|..+|+++++ ++|+++.++.|..+.+++.+.|++
T Consensus 88 l~-~~----------------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 88 LA-RK----------------------------------FSVKSLPTIILL-KNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp HH-HH----------------------------------TTCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHTT
T ss_pred HH-HH----------------------------------cCCCCcCEEEEE-ECCEEEEEecCCCCHHHHHHHHHh
Confidence 22 12 356677999999 799999999998888888877654
No 111
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.71 E-value=5.8e-17 Score=109.11 Aligned_cols=114 Identities=16% Similarity=0.170 Sum_probs=91.0
Q ss_pred CCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHH
Q 030845 8 PQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEA 87 (170)
Q Consensus 8 ~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~ 87 (170)
-+..+++..+.+.++..+......+|++||+||++||++|+.+.+.|.++.+++++. +.++.|+.+. ..
T Consensus 31 ~~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~~-------~~--- 99 (148)
T 3p2a_A 31 CGHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK-VRFVKVNTEA-------EP--- 99 (148)
T ss_dssp TCCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH---
T ss_pred cCCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEECcC-------CH---
Confidence 345667778888888776555567899999999999999999999999999999765 9999998762 12
Q ss_pred HHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 88 HEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 88 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
..+ ++ ++|..+|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 100 -~l~-~~----------------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 142 (148)
T 3p2a_A 100 -ALS-TR----------------------------------FRIRSIPTIMLY-RNGKMIDMLNGAVPKAPFDNWLDEQL 142 (148)
T ss_dssp -HHH-HH----------------------------------TTCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred -HHH-HH----------------------------------CCCCccCEEEEE-ECCeEEEEEeCCCCHHHHHHHHHHHh
Confidence 222 22 356667887777 69999999999999999999999987
Q ss_pred hc
Q 030845 168 GD 169 (170)
Q Consensus 168 ~~ 169 (170)
.+
T Consensus 143 ~~ 144 (148)
T 3p2a_A 143 SR 144 (148)
T ss_dssp HS
T ss_pred cc
Confidence 63
No 112
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.70 E-value=1.8e-18 Score=119.28 Aligned_cols=121 Identities=8% Similarity=0.044 Sum_probs=72.8
Q ss_pred CccCCcEEEEEEecCCCCCchHhHHHH---HHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEE
Q 030845 28 SIYKGKVLLIVNVASKCGFTDSNYSQL---TDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQK 104 (170)
Q Consensus 28 ~~~~gk~~ll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 104 (170)
+..+||++||+||++||++|+.+.+.+ .++.+.+++ ++.++.|++|. .. .+..............+.
T Consensus 43 a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~-------~~-~~~~~~~~~~~~~~~~~~- 112 (172)
T 3f9u_A 43 ARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDN-------KT-PLTEPVKIMENGTERTLR- 112 (172)
T ss_dssp HHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTC-------CC-EEEEEEEEEETTEEEEEE-
T ss_pred HHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCc-------cc-ccchhhhhhhcchhhhhh-
Confidence 335699999999999999999863333 444444443 59999998873 11 000000000000000000
Q ss_pred eecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCC-chhHHHHHHHHhhc
Q 030845 105 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTS-PMAIEGDIKNALGD 169 (170)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~-~~~~~~~l~~ll~~ 169 (170)
. ...-+..+.. ..+++..+|+++|+|++|+++.++.|..+ .+++.+.|++++++
T Consensus 113 -~-----~~~~~~~~~~-----~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~~ 167 (172)
T 3f9u_A 113 -T-----VGDKWSYLQR-----VKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLEN 167 (172)
T ss_dssp -E-----HHHHHHHHHH-----HHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHH
T ss_pred -h-----hhhhhhHHHH-----HHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHHH
Confidence 0 0000000000 00478889999999999999999999888 88899999888753
No 113
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.67 E-value=9.4e-17 Score=106.08 Aligned_cols=94 Identities=15% Similarity=0.042 Sum_probs=73.0
Q ss_pred cCCcEEEEEEecCCCCCchHhHHHHH--HHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeec
Q 030845 30 YKGKVLLIVNVASKCGFTDSNYSQLT--DLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRV 107 (170)
Q Consensus 30 ~~gk~~ll~f~~~~C~~C~~~~~~l~--~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (170)
..||++||+||++||++|+.+.+.|. ++.+++++ ++.++.|+++. .+.....+ .++
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~--------~~~~~~l~-~~~------------ 84 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN--------FDRNLELS-QAY------------ 84 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT--------TTSSHHHH-HHT------------
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc--------ccchHHHH-HHh------------
Confidence 46899999999999999999999999 99999865 49999998741 01112223 232
Q ss_pred CCCCCchHHHHHhhhcCCccCccc---ccCceEEEECCCCcEEEecCC-------CCCchhHHHHHHHHh
Q 030845 108 NGPNAEPLYKFLKASKTGYFGSRI---KWNFTKFLVDTEGNVIGRYSP-------TTSPMAIEGDIKNAL 167 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~v---~~~p~~~lid~~G~i~~~~~g-------~~~~~~~~~~l~~ll 167 (170)
++ ..+|+++++|++|+++.++.| ..+.+++.+.|+++.
T Consensus 85 ----------------------~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 85 ----------------------GDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp ----------------------TCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred ----------------------CCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 44 567999999999999999888 567777888887764
No 114
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.67 E-value=2.8e-16 Score=100.01 Aligned_cols=87 Identities=15% Similarity=0.164 Sum_probs=67.6
Q ss_pred ccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecC
Q 030845 29 IYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVN 108 (170)
Q Consensus 29 ~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 108 (170)
+..+|++||.|||+||++|+.+.|.+.++.+++++ +.++.|.+|. .. +.+ .+
T Consensus 17 ~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~-------~~----~l~-~~-------------- 68 (105)
T 3zzx_A 17 EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDE-------CE----DIA-QD-------------- 68 (105)
T ss_dssp HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTT-------CH----HHH-HH--------------
T ss_pred hcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEeccc-------CH----HHH-HH--------------
Confidence 34679999999999999999999999999998864 8888887652 22 222 22
Q ss_pred CCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHH
Q 030845 109 GPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKN 165 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ 165 (170)
++|..+||++++ ++|+++.++.|. +++++.+.|++
T Consensus 69 --------------------~~V~~~PT~~~~-~~G~~v~~~~G~-~~~~l~~~i~k 103 (105)
T 3zzx_A 69 --------------------NQIACMPTFLFM-KNGQKLDSLSGA-NYDKLLELVEK 103 (105)
T ss_dssp --------------------TTCCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHH
T ss_pred --------------------cCCCeecEEEEE-ECCEEEEEEeCc-CHHHHHHHHHh
Confidence 367777886665 899999999985 67777777765
No 115
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.67 E-value=1.4e-16 Score=103.05 Aligned_cols=88 Identities=18% Similarity=0.271 Sum_probs=71.7
Q ss_pred cCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCC
Q 030845 30 YKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNG 109 (170)
Q Consensus 30 ~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (170)
.++|++||+||++||++|+.+.|.|.++.+++++ +.++.|++|. .. ..+ ++
T Consensus 29 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~-------~~----~l~-~~--------------- 79 (116)
T 3qfa_C 29 AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDD-------CQ----DVA-SE--------------- 79 (116)
T ss_dssp HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTT-------TH----HHH-HH---------------
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------CH----HHH-HH---------------
Confidence 4789999999999999999999999999999876 9999998762 11 222 22
Q ss_pred CCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 110 PNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.|. +.+++.+.|+++|
T Consensus 80 -------------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 80 -------------------CEVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp -------------------TTCCSSSEEEEE-SSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred -------------------cCCccccEEEEE-eCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 356667897777 899999999998 8888999888764
No 116
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.66 E-value=8.2e-17 Score=104.73 Aligned_cols=119 Identities=17% Similarity=0.160 Sum_probs=80.0
Q ss_pred CCCCCCCCCCcccceEeecCCCCeeecCc--cCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCC
Q 030845 1 MGASESVPQKSIYEFTVKDSKGKDVDLSI--YKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLK 78 (170)
Q Consensus 1 ~~~~~~~~~~~~p~f~l~~~~G~~v~l~~--~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~ 78 (170)
|.++....+...+.+.+.+.++-.-.+.+ ..+|+++|.||++||++|..+.+.|.++.+++++ +.++.|++|.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~--- 75 (122)
T 2vlu_A 1 MAASATAAAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE--- 75 (122)
T ss_dssp -----------CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT---
T ss_pred CcccccccCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC---
Confidence 44555556666777776554322222222 2589999999999999999999999999999875 9999998762
Q ss_pred CCCCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchh
Q 030845 79 QEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMA 158 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~ 158 (170)
.. ..+ .+ +++..+|+++++ ++|+++.++.|.. .++
T Consensus 76 ----~~----~~~-~~----------------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~ 110 (122)
T 2vlu_A 76 ----LK----PIA-EQ----------------------------------FSVEAMPTFLFM-KEGDVKDRVVGAI-KEE 110 (122)
T ss_dssp ----CH----HHH-HH----------------------------------TTCCSSSEEEEE-ETTEEEEEEESSC-HHH
T ss_pred ----CH----HHH-HH----------------------------------cCCCcccEEEEE-eCCEEEEEEeCcC-HHH
Confidence 11 222 12 256667886555 8999999999987 888
Q ss_pred HHHHHHHHhhc
Q 030845 159 IEGDIKNALGD 169 (170)
Q Consensus 159 ~~~~l~~ll~~ 169 (170)
+.+.|++++++
T Consensus 111 l~~~l~~~l~~ 121 (122)
T 2vlu_A 111 LTAKVGLHAAA 121 (122)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHhcc
Confidence 99999988753
No 117
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.65 E-value=3.2e-16 Score=103.12 Aligned_cols=90 Identities=19% Similarity=0.192 Sum_probs=74.3
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|++||.||++||++|+.+.+.+.++.+++++. +.++.|++|. .. +.+ ++
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~~~-------~~----~l~-~~---------------- 89 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP----GTA-PK---------------- 89 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEETTT-------CC----TTS-GG----------------
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCC-------CH----HHH-HH----------------
Confidence 5799999999999999999999999999999764 9999998763 10 000 01
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 90 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 90 ------------------YGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp ------------------GTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred ------------------cCCCccCEEEEE-eCCEEEEEEcCCCCHHHHHHHHHHhhC
Confidence 367778999999 999999999998888899999988763
No 118
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.65 E-value=3.5e-16 Score=99.40 Aligned_cols=90 Identities=14% Similarity=0.177 Sum_probs=74.3
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+++++|.||++||++|..+.+.+.++.+++++. +.++.|++|. .. ..+ .+
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~---------------- 70 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK-AVFGRLNVDE-------NQ----KIA-DK---------------- 70 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC-ceEEEEcccc-------CH----HHH-Hh----------------
Confidence 5899999999999999999999999999999864 9999998752 22 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 71 ------------------~~i~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 109 (109)
T 3tco_A 71 ------------------YSVLNIPTTLIF-VNGQLVDSLVGAVDEDTLESTVNKYLK 109 (109)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred ------------------cCcccCCEEEEE-cCCcEEEeeeccCCHHHHHHHHHHHhC
Confidence 256667898999 999999999998889999999998764
No 119
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.65 E-value=3.3e-16 Score=100.53 Aligned_cols=90 Identities=18% Similarity=0.158 Sum_probs=74.4
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|+++|+||++||++|..+.+.+.++.+++++ ++.++.|++|. .. +.+ ++
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~-------~~----~l~-~~---------------- 66 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE-------NQ----ETA-GK---------------- 66 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT-------CC----SHH-HH----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC-------CH----HHH-HH----------------
Confidence 789999999999999999999999999999986 49999998763 11 111 11
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++.
T Consensus 67 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 67 ------------------YGVMSIPTLLVL-KDGEVVETSVGFKPKEALQELVNKHLL 105 (112)
T ss_dssp ------------------TTCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTSC
T ss_pred ------------------cCCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 356677999999 999999999998888899998887653
No 120
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.65 E-value=1.1e-15 Score=101.55 Aligned_cols=91 Identities=16% Similarity=0.145 Sum_probs=74.5
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|++||.||++||++|+.+.+.|.++.+++++. +.++.|++|. .. ..+ .+
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~~----~l~-~~---------------- 87 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIYKVDTEK-------EQ----ELA-GA---------------- 87 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEEEEeCCC-------CH----HHH-HH----------------
Confidence 4689999999999999999999999999999764 9999998762 11 222 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
+++..+|+++++|++|+++ ++.|..+.+++.+.|++++..
T Consensus 88 ------------------~~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 88 ------------------FGIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp ------------------TTCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTS
T ss_pred ------------------cCCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 3566679999999999988 678888899999999988753
No 121
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.65 E-value=3e-15 Score=98.32 Aligned_cols=91 Identities=14% Similarity=0.095 Sum_probs=74.1
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|++||+||++||++|+.+.+.+.++.+++++. +.++.|++|. .. ..+ .+
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~-------~~----~l~-~~---------------- 84 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNADK-------HQ----SLG-GQ---------------- 84 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCC-------CH----HHH-HH----------------
Confidence 4789999999999999999999999999999865 8899998752 11 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|++++++++|.++.++.|..+.+++.+.|.+.++
T Consensus 85 ------------------~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 85 ------------------YGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp ------------------HTCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred ------------------cCCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 2566679999999999877888998888889999888764
No 122
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.65 E-value=1.2e-16 Score=105.82 Aligned_cols=104 Identities=12% Similarity=0.080 Sum_probs=75.0
Q ss_pred EeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhc
Q 030845 16 TVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRY 95 (170)
Q Consensus 16 ~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~ 95 (170)
++.+.++-.-.+++.+||++||.||++||++|+.+.+.|.++.+++ ++.++.|.++. . . ..+ .+
T Consensus 24 ~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~-------~-~---~l~-~~- 87 (133)
T 3cxg_A 24 ELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDI-------H-P---KLN-DQ- 87 (133)
T ss_dssp ECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTT-------C-H---HHH-HH-
T ss_pred EecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccc-------h-H---HHH-Hh-
Confidence 3333333333456667899999999999999999999999988776 48888887652 1 1 122 12
Q ss_pred CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEE-CCCCc--EEEecCCCCCchhHHHHHHHHhhc
Q 030845 96 KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLV-DTEGN--VIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 96 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~li-d~~G~--i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
+++..+|+++++ +++|+ ++.++.|. +.+++.+.|++++.+
T Consensus 88 ---------------------------------~~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 88 ---------------------------------HNIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp ---------------------------------TTCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSEE
T ss_pred ---------------------------------cCCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHHh
Confidence 356677899888 45555 99998887 788899999888753
No 123
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.65 E-value=1.6e-15 Score=96.21 Aligned_cols=90 Identities=16% Similarity=0.172 Sum_probs=72.7
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|+++|.||++||++|..+.+.+.++.+++++. +.++.|+.+. .. +.+ .+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~---------------- 68 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNTDE-------SP----NVA-SE---------------- 68 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc-eEEEEEECCC-------CH----HHH-HH----------------
Confidence 5799999999999999999999999999999764 9999998763 22 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 69 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 107 (107)
T 1dby_A 69 ------------------YGIRSIPTIMVF-KGGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp ------------------HTCCSSCEEEEE-SSSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred ------------------CCCCcCCEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 255667886666 899999999998888899999988764
No 124
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.64 E-value=1.1e-15 Score=97.14 Aligned_cols=90 Identities=19% Similarity=0.188 Sum_probs=73.9
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|+++|.||++||++|+.+.+.+.++.+++++. +.++.|+++. .. ..+ .+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~---------------- 69 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP----GTA-PK---------------- 69 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------CT----THH-HH----------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEEEEECCC-------CH----HHH-HH----------------
Confidence 5799999999999999999999999999999764 9999998763 11 111 11
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 70 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 70 ------------------YGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred ------------------cCCcccCEEEEE-eCCEEEEEEecCCCHHHHHHHHHHhhC
Confidence 356677999998 899999999998888899999988763
No 125
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.64 E-value=2.2e-16 Score=99.90 Aligned_cols=89 Identities=15% Similarity=0.137 Sum_probs=72.6
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|+++|.||++||++|+.+.+.+.++.+++++. +.++.|++|. .. +.+ .+
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------~~----~~~-~~---------------- 66 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDE-------NP----ETT-SQ---------------- 66 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECcC-------CH----HHH-HH----------------
Confidence 5789999999999999999999999999999765 9999998763 21 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 67 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 67 ------------------FGIMSIPTLILF-KGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred ------------------cCCccccEEEEE-eCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 356667999999 89999999999888888888887765
No 126
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.64 E-value=7.1e-16 Score=105.96 Aligned_cols=93 Identities=17% Similarity=0.100 Sum_probs=67.0
Q ss_pred ecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEe
Q 030845 26 DLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKV 105 (170)
Q Consensus 26 ~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 105 (170)
.+++++||+++|+|||+|||+|+.++|.|.++.++++ ++.++.|+.| +..+.+ .++..
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d-----------~~~~~~-~~~~~-------- 105 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKG-----------RAEDDL-RQRLA-------- 105 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHH-----------HHHHHT-TTTTT--------
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECC-----------CCHHHH-HHHHH--------
Confidence 3556789999999999999999999999999999875 4888888543 222222 12110
Q ss_pred ecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHH
Q 030845 106 RVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKN 165 (170)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ 165 (170)
.++..+|+++++|++|+++.++.+ .+..+.+.+++
T Consensus 106 -----------------------~~v~~iPt~i~~~~~G~~~~~~g~--~p~~~~~~i~~ 140 (167)
T 1z6n_A 106 -----------------------LERIAIPLVLVLDEEFNLLGRFVE--RPQAVLDGGPQ 140 (167)
T ss_dssp -----------------------CSSCCSSEEEEECTTCCEEEEEES--SCHHHHHHCHH
T ss_pred -----------------------cCCCCcCeEEEECCCCCEEEEEcC--CCHHHHHhHHH
Confidence 146677999999999999888743 34444444433
No 127
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.64 E-value=1.3e-15 Score=97.43 Aligned_cols=90 Identities=20% Similarity=0.256 Sum_probs=70.2
Q ss_pred ccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecC
Q 030845 29 IYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVN 108 (170)
Q Consensus 29 ~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 108 (170)
+.++|+++|+||++||++|+.+.|.|.++.+++++ +.++.|+++. ... ..+ .+
T Consensus 21 ~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~-------~~~---~~~-~~-------------- 73 (111)
T 2pu9_C 21 AAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQ-------ENK---TLA-KE-------------- 73 (111)
T ss_dssp TCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSS-------TTH---HHH-HH--------------
T ss_pred hcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCc-------chH---HHH-HH--------------
Confidence 34689999999999999999999999999999874 8999998652 111 222 12
Q ss_pred CCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 109 GPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+ ++++++|+++.++.|. ..+++.+.|++++
T Consensus 74 --------------------~~v~~~Pt-~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 74 --------------------LGIRVVPT-FKILKENSVVGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp --------------------HCCSBSSE-EEEESSSSEEEEEESS-CHHHHHHHHHHHH
T ss_pred --------------------cCCCeeeE-EEEEeCCcEEEEEcCC-CHHHHHHHHHHhh
Confidence 25666788 7778999999998887 4778888888765
No 128
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=3.3e-16 Score=102.96 Aligned_cols=100 Identities=13% Similarity=0.191 Sum_probs=75.6
Q ss_pred eeecCccCCcEEEEEEecCCCCCchHhHHHH---HHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCc
Q 030845 24 DVDLSIYKGKVLLIVNVASKCGFTDSNYSQL---TDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYP 100 (170)
Q Consensus 24 ~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (170)
.+.+++.+||++||.||++||++|+.+.+.+ .++.+.++. ++.++.|..+. + .....+ .+
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~------~---~~~~~~-~~------ 81 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEK------G---EGVELR-KK------ 81 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSS------T---THHHHH-HH------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCC------c---chHHHH-HH------
Confidence 3455556799999999999999999999998 666655543 47788876541 1 112222 22
Q ss_pred eeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 101 IFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 101 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++|++|+++.++.|..+.+++.+.|++++.
T Consensus 82 ----------------------------~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~ 121 (130)
T 2kuc_A 82 ----------------------------YGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVE 121 (130)
T ss_dssp ----------------------------TTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHS
T ss_pred ----------------------------cCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHH
Confidence 3566679999999999999999998888899999998875
No 129
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.64 E-value=4.6e-16 Score=105.04 Aligned_cols=90 Identities=11% Similarity=0.021 Sum_probs=72.8
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|++||+||++||++|+.+.|.|.++.++++++ +.++.|++|. .. +++ .+
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~-------~~----~l~-~~---------------- 72 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQ-------TA----VYT-QY---------------- 72 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTT-------CC----HHH-HH----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCc-------CH----HHH-HH----------------
Confidence 4899999999999999999999999999999765 9999998763 11 122 22
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEE---------EecCC-CCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVI---------GRYSP-TTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~---------~~~~g-~~~~~~~~~~l~~ll~ 168 (170)
++|..+|+++ ++++|+++ .++.| ..+.+++.+.|+++++
T Consensus 73 ------------------~~v~~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~ 121 (149)
T 3gix_A 73 ------------------FDISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYR 121 (149)
T ss_dssp ------------------TTCCSSSEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHH
T ss_pred ------------------cCCCccCeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHH
Confidence 3566678877 77899999 88888 7788889999988864
No 130
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.64 E-value=2.6e-15 Score=96.32 Aligned_cols=90 Identities=13% Similarity=0.127 Sum_probs=75.2
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+++++|.||++||++|..+.+.+.++.++++++ +.++.|+++. .. ..+ .+
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------~~----~~~-~~---------------- 74 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDP-------NP----TTV-KK---------------- 74 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTT-------CH----HHH-HH----------------
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCC-------CH----HHH-HH----------------
Confidence 6799999999999999999999999999999865 9999998763 22 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++.
T Consensus 75 ------------------~~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 75 ------------------YKVEGVPALRLV-KGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred ------------------cCCCceeEEEEE-cCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 356667899999 999999999998888999999998875
No 131
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.64 E-value=1e-15 Score=96.85 Aligned_cols=89 Identities=17% Similarity=0.209 Sum_probs=72.7
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
++++++|.||++||++|..+.+.+.++.++++++ +.++.|++|. .. ..+ ++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~---------------- 68 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDE-------NP----STA-AK---------------- 68 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-HH----------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCc-------CH----HHH-Hh----------------
Confidence 7899999999999999999999999999999876 9999998763 22 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++|
T Consensus 69 ------------------~~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 69 ------------------YEVMSIPTLIVF-KDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp ------------------TTCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred ------------------CCCcccCEEEEE-eCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 256667888888 49999999999888888888887754
No 132
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.6e-15 Score=97.04 Aligned_cols=91 Identities=11% Similarity=0.128 Sum_probs=69.9
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
++|+++|.||++||++|+.+.|.+.++.++++..++.++.|+++. .. ..+ .+
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~~~-~~---------------- 71 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE-------NS----EIS-EL---------------- 71 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc-------CH----HHH-HH----------------
Confidence 489999999999999999999999999999765569999998762 11 222 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
+++..+|+++++ ++|+++.++.|. .++++.+.|+++++.
T Consensus 72 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~~~ 110 (112)
T 3d6i_A 72 ------------------FEISAVPYFIII-HKGTILKELSGA-DPKEYVSLLEDCKNS 110 (112)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEECSC-CHHHHHHHHHHHHHH
T ss_pred ------------------cCCCcccEEEEE-ECCEEEEEecCC-CHHHHHHHHHHHHhh
Confidence 356667897777 799999999887 456688888888753
No 133
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.63 E-value=1.2e-15 Score=97.58 Aligned_cols=90 Identities=19% Similarity=0.200 Sum_probs=73.3
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|+++|.||++||++|+.+.+.+.++.+++++. +.++.|++|. .. +.+ .+
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~---------------- 72 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNIDE-------NP----GTA-AK---------------- 72 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcCC-------CH----HHH-Hh----------------
Confidence 4799999999999999999999999999999764 9999998763 22 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 73 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 73 ------------------YGVMSIPTLNVY-QGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred ------------------CCCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 356667886666 899999999998888899999998875
No 134
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.63 E-value=5.3e-16 Score=105.40 Aligned_cols=91 Identities=18% Similarity=0.187 Sum_probs=75.1
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.++++||+||++||++|+.+.|.|+++.++++++ +.++.|++|. .. ..+ .+
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~~-------~~----~l~-~~---------------- 113 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQA-------HP----AVA-GR---------------- 113 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTT-------ST----HHH-HH----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCCc-------cH----HHH-HH----------------
Confidence 5799999999999999999999999999999865 9999998763 11 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
++|..+|+++++ ++|+++.++.|..+.+++.+.|++++..
T Consensus 114 ------------------~~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 114 ------------------HRIQGIPAFILF-HKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred ------------------cCCCcCCEEEEE-eCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 356777998888 7999999999988889999999988753
No 135
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.63 E-value=1.2e-15 Score=97.59 Aligned_cols=87 Identities=15% Similarity=0.269 Sum_probs=69.8
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
++|++||+||++||++|+.+.|.+.++.+++++ +.++.|.+|. .. ..+ ++
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~-------~~----~l~-~~---------------- 72 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDE-------LG----DVA-QK---------------- 72 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCC-------CH----HHH-HH----------------
Confidence 589999999999999999999999999999965 8888887652 11 222 22
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|++++++ +|+++.++.|. +++++.+.|++++
T Consensus 73 ------------------~~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 73 ------------------NEVSAMPTLLLFK-NGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp ------------------TTCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred ------------------cCCCccCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 3566678988887 99999999887 6688888887764
No 136
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.63 E-value=1.3e-15 Score=101.27 Aligned_cols=104 Identities=12% Similarity=0.137 Sum_probs=79.3
Q ss_pred eecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccC--CeEEEEeeCCCCCCCCCCCHHHHHHHHHHh
Q 030845 17 VKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHK--GLEILAFPCNQFLKQEPGTSQEAHEFACTR 94 (170)
Q Consensus 17 l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~ 94 (170)
+..+++..+...-..+|++||+||++||++|+.+.+.|.++.+++++. ++.++.|.++. . ...+ .+
T Consensus 19 v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~~~-~~ 86 (140)
T 2dj1_A 19 VWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS-------A----SMLA-SK 86 (140)
T ss_dssp EEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT-------C----HHHH-HH
T ss_pred CEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc-------c----HHHH-HH
Confidence 455566655443346899999999999999999999999999999876 47888876542 1 1222 12
Q ss_pred cCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 95 YKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 95 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|+++++ ++|+ +.++.|..+.+++.+.|++++.
T Consensus 87 ----------------------------------~~v~~~Pt~~~~-~~G~-~~~~~g~~~~~~l~~~l~~~~~ 124 (140)
T 2dj1_A 87 ----------------------------------FDVSGYPTIKIL-KKGQ-AVDYDGSRTQEEIVAKVREVSQ 124 (140)
T ss_dssp ----------------------------------TTCCSSSEEEEE-ETTE-EEECCSCCCHHHHHHHHHHHHS
T ss_pred ----------------------------------CCCCccCeEEEE-ECCc-EEEcCCCCCHHHHHHHHHHhcC
Confidence 356667899999 7898 6678898889999999998875
No 137
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.63 E-value=8.9e-16 Score=97.35 Aligned_cols=88 Identities=20% Similarity=0.209 Sum_probs=69.4
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+++++|+||++||++|+.+.|.+.++.++++ ++.++.|++|. .. ..+ .+
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~-------~~----~l~-~~---------------- 66 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQD-------MQ----EIA-GR---------------- 66 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECC-------C---------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCC-------CH----HHH-Hh----------------
Confidence 57999999999999999999999999999984 59999998763 11 111 11
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 67 ------------------~~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 67 ------------------YAVFTGPTVLLF-YNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp ---------------------CCCCEEEEE-ETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred ------------------cCCCCCCEEEEE-eCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 356677998888 59999999999888999999988765
No 138
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.63 E-value=2e-15 Score=97.89 Aligned_cols=89 Identities=13% Similarity=0.177 Sum_probs=73.3
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|++||.||++||++|+.+.+.|.++.+++++. +.++.|++|. .. +.+ ++
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~-v~~~~vd~d~-------~~----~l~-~~---------------- 80 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK-VVMAKVDIDD-------HT----DLA-IE---------------- 80 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEETTT-------TH----HHH-HH----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEeCCC-------CH----HHH-HH----------------
Confidence 5789999999999999999999999999999764 9999998762 11 222 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 81 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 81 ------------------YEVSAVPTVLAM-KNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred ------------------cCCCcccEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 256667898888 89999999999888899999998876
No 139
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.63 E-value=1.1e-15 Score=96.03 Aligned_cols=90 Identities=17% Similarity=0.182 Sum_probs=74.1
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
++++++|.||++||++|..+.+.+.++.+++++ +.++.|++|. .. ..+ .+
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~-------~~----~~~-~~---------------- 64 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE-------NP----DIA-AR---------------- 64 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC-------CH----HHH-Hh----------------
Confidence 579999999999999999999999999999876 9999998763 11 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++.+
T Consensus 65 ------------------~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 104 (104)
T 2e0q_A 65 ------------------YGVMSLPTVIFF-KDGEPVDEIIGAVPREEIEIRIKNLLGE 104 (104)
T ss_dssp ------------------TTCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred ------------------CCccccCEEEEE-ECCeEhhhccCCCCHHHHHHHHHHHhcC
Confidence 256667898888 8999999999988889999999988763
No 140
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.62 E-value=2.6e-15 Score=98.22 Aligned_cols=89 Identities=17% Similarity=0.183 Sum_probs=70.6
Q ss_pred cCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCC
Q 030845 30 YKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNG 109 (170)
Q Consensus 30 ~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (170)
.++|+++|+||++||++|+.+.+.|.++.++++ ++.++.|+.|. .. +.+ ++
T Consensus 36 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~-------~~----~l~-~~--------------- 86 (124)
T 1xfl_A 36 ESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDE-------LK----SVA-SD--------------- 86 (124)
T ss_dssp HTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT-------SH----HHH-HH---------------
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECcc-------CH----HHH-HH---------------
Confidence 368999999999999999999999999999986 59999998752 11 222 12
Q ss_pred CCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 110 PNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.|. +++++.+.|+++++
T Consensus 87 -------------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 124 (124)
T 1xfl_A 87 -------------------WAIQAMPTFMFL-KEGKILDKVVGA-KKDELQSTIAKHLA 124 (124)
T ss_dssp -------------------TTCCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHCC
T ss_pred -------------------cCCCccCEEEEE-ECCEEEEEEeCC-CHHHHHHHHHHhcC
Confidence 356667886665 899999999884 78888888888763
No 141
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.62 E-value=2.1e-16 Score=105.16 Aligned_cols=92 Identities=21% Similarity=0.300 Sum_probs=73.6
Q ss_pred CccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeec
Q 030845 28 SIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRV 107 (170)
Q Consensus 28 ~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (170)
++.+||+++|+||++||++|+.+.+.|.++.++++ ++.++.|++|. .. ..+ ++
T Consensus 42 ~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~-------~~----~~~-~~------------- 94 (139)
T 3d22_A 42 ASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDE-------LS----DFS-AS------------- 94 (139)
T ss_dssp HHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHH-HH-------------
T ss_pred HhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcc-------cH----HHH-HH-------------
Confidence 33468999999999999999999999999999985 59999998762 11 222 12
Q ss_pred CCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 108 NGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
+++..+|+++++ ++|+++.++.|. +++++.+.|+++++.
T Consensus 95 ---------------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 95 ---------------------WEIKATPTFFFL-RDGQQVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp ---------------------TTCCEESEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHHT
T ss_pred ---------------------cCCCcccEEEEE-cCCeEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 356667887777 999999999887 788899999888754
No 142
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.62 E-value=3.4e-15 Score=95.45 Aligned_cols=88 Identities=15% Similarity=0.108 Sum_probs=70.9
Q ss_pred CcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCCC
Q 030845 32 GKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPN 111 (170)
Q Consensus 32 gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (170)
+|+++|.||++||++|+.+.+.|.++.+++++ ++.++.|+.|. .. ..+ ++
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~----~~~-~~----------------- 73 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA-------VA----AVA-EA----------------- 73 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT-------TH----HHH-HH-----------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc-------hH----HHH-HH-----------------
Confidence 89999999999999999999999999999976 59999998752 11 222 12
Q ss_pred CchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 112 AEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.|. +.+++.+.|+++++
T Consensus 74 -----------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 74 -----------------AGITAMPTFHVY-KDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp -----------------HTCCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred -----------------cCCCcccEEEEE-ECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 245667885555 899999999988 88889999998875
No 143
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.61 E-value=1.1e-15 Score=102.08 Aligned_cols=90 Identities=9% Similarity=0.104 Sum_probs=73.9
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.++++||.||++||++|+.+.+.+.++.++++++ +.++.|.++. .. ..+ .+
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~~----~l~-~~---------------- 73 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS-AVFGRINIAT-------NP----WTA-EK---------------- 73 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECCc-------CH----hHH-HH----------------
Confidence 4799999999999999999999999999999875 9999998763 22 222 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 74 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 74 ------------------YGVQGTPTFKFF-CHGRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp ------------------HTCCEESEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred ------------------CCCCcCCEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 256667887776 899999999998889999999998875
No 144
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.41 E-value=4.3e-17 Score=107.25 Aligned_cols=103 Identities=12% Similarity=0.210 Sum_probs=79.3
Q ss_pred CCeeecCccCCcEEEEEEecCCCCCchHhHHHH---HHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCC
Q 030845 22 GKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQL---TDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAE 98 (170)
Q Consensus 22 G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~ 98 (170)
.+.+.++...||++||+||++||++|+.+.+.+ .++.+.+++ ++.++.|+++. +.....+ .+
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------~~~~~~~-~~---- 73 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDT---------PEGQELA-RR---- 73 (130)
Confidence 566778888899999999999999999999999 888887765 47788776541 1111111 11
Q ss_pred CceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECC-CCcE--EEecCCCCCchhHHHHHHHHhhc
Q 030845 99 YPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDT-EGNV--IGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 99 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~-~G~i--~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
+++..+|+++++|+ +|++ +.++.|..+.+++.+.|++++++
T Consensus 74 ------------------------------~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 74 ------------------------------YRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 36777899999996 5999 88899988888999999888754
No 145
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.61 E-value=3.3e-15 Score=94.30 Aligned_cols=102 Identities=14% Similarity=0.154 Sum_probs=76.6
Q ss_pred ecCCCCeeecCc-cCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcC
Q 030845 18 KDSKGKDVDLSI-YKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYK 96 (170)
Q Consensus 18 ~~~~G~~v~l~~-~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
.+.++..+...- -.+++++|.||++||++|+.+.+.+.++.+++++. +.++.|+.+. .. +.+ .+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~-- 67 (105)
T 1fb6_A 3 QDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVYKLNTDE-------AP----GIA-TQ-- 67 (105)
T ss_dssp EECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-HH--
T ss_pred eechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-eEEEEEcCcc-------hH----HHH-Hh--
Confidence 344555543322 25789999999999999999999999999999764 9999998763 21 222 22
Q ss_pred CCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 97 AEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 97 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 68 --------------------------------~~v~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 68 --------------------------------YNIRSIPTVLFF-KNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp --------------------------------TTCCSSSEEEEE-ETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred --------------------------------CCCCcccEEEEE-eCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 255667886666 79999999999888888999888764
No 146
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.60 E-value=2.9e-15 Score=97.45 Aligned_cols=90 Identities=16% Similarity=0.150 Sum_probs=72.5
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|+++|.||++||++|..+.+.|.++.+++++.++.++.|++|. .. ..+ ++
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~-------~~----~~~-~~---------------- 83 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE-------QS----QIA-QE---------------- 83 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC-------CH----HHH-HH----------------
Confidence 579999999999999999999999999999887679999998763 22 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.|. +++++.+.|+++++
T Consensus 84 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 121 (121)
T 2j23_A 84 ------------------VGIRAMPTFVFF-KNGQKIDTVVGA-DPSKLQAAITQHSA 121 (121)
T ss_dssp ------------------HTCCSSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHTC
T ss_pred ------------------cCCCcccEEEEE-ECCeEEeeEcCC-CHHHHHHHHHHhhC
Confidence 245567887777 699999999887 88889999988763
No 147
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=4.9e-15 Score=97.52 Aligned_cols=91 Identities=14% Similarity=0.119 Sum_probs=73.6
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhcc---CCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeec
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKH---KGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRV 107 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~---~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (170)
.++++||.||++||++|+.+.+.+.++.+++++ .++.++.|+++. .. ..+ .+
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~l~-~~------------- 78 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV-------NQ----VLA-SR------------- 78 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT-------CC----HHH-HH-------------
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC-------CH----HHH-Hh-------------
Confidence 578999999999999999999999999999972 349999998652 11 122 11
Q ss_pred CCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 108 NGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++++ |+++.++.|..+.+++.+.|.+++.
T Consensus 79 ---------------------~~v~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 79 ---------------------YGIRGFPTIKIFQK-GESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp ---------------------HTCCSSSEEEEEET-TEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred ---------------------CCCCeeCeEEEEeC-CCceEEecCCCCHHHHHHHHHHHhh
Confidence 25667799999987 8888899998889999999988875
No 148
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.60 E-value=5.1e-15 Score=93.71 Aligned_cols=89 Identities=15% Similarity=0.171 Sum_probs=72.5
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+++++|.||++||++|..+.+.+.++.+++++ ++.++.|+++. .. ..+ ++
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------~~----~~~-~~---------------- 69 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD-------NP----ETP-NA---------------- 69 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT-------CC----HHH-HH----------------
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC-------CH----HHH-Hh----------------
Confidence 579999999999999999999999999999986 49999998763 11 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 70 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 70 ------------------YQVRSIPTLMLV-RDGKVIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHTC
T ss_pred ------------------cCCCccCEEEEE-eCCEEEEEecCCCCHHHHHHHHHhcC
Confidence 356667898999 99999999999888888888887653
No 149
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.60 E-value=2.4e-15 Score=95.00 Aligned_cols=88 Identities=19% Similarity=0.272 Sum_probs=71.5
Q ss_pred cCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCC
Q 030845 30 YKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNG 109 (170)
Q Consensus 30 ~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (170)
.++|+++|.||++||++|+.+.+.+.++.+++++ +.++.|+.|. .. ..+ ++
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~-------~~----~~~-~~--------------- 68 (105)
T 3m9j_A 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDD-------CQ----DVA-SE--------------- 68 (105)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTT-------CH----HHH-HH---------------
T ss_pred cCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhh-------hH----HHH-HH---------------
Confidence 4689999999999999999999999999999865 9999998752 21 222 12
Q ss_pred CCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 110 PNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.|. +.+++.+.|+++|
T Consensus 69 -------------------~~v~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 69 -------------------SEVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp -------------------TTCCBSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred -------------------cCCCcCcEEEEE-ECCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 356667898888 899999999988 8888988888764
No 150
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.60 E-value=2.4e-15 Score=97.52 Aligned_cols=104 Identities=16% Similarity=0.056 Sum_probs=79.8
Q ss_pred EeecCCCCeeecC-ccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhcc----CCeEEEEeeCCCCCCCCCCCHHHHHHH
Q 030845 16 TVKDSKGKDVDLS-IYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKH----KGLEILAFPCNQFLKQEPGTSQEAHEF 90 (170)
Q Consensus 16 ~l~~~~G~~v~l~-~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~----~~v~vi~vs~d~~~~~~~~~~~~~~~~ 90 (170)
.+.+++++.+... ..++++++|+||++||++|+.+.|.+.++.+++++ .++.++.|.++. .
T Consensus 8 ~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~-------~------- 73 (121)
T 2djj_A 8 PVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA-------N------- 73 (121)
T ss_dssp SSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT-------S-------
T ss_pred CeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc-------c-------
Confidence 3455666666544 24789999999999999999999999999999986 258888887652 0
Q ss_pred HHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcE-EEecCCCCCchhHHHHHHHHhh
Q 030845 91 ACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNV-IGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 91 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i-~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
. +. .++..+|++++++++|++ +.++.|..+.+++.+.|++++.
T Consensus 74 -----~-----~~-------------------------~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 74 -----D-----VP-------------------------DEIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp -----C-----CS-------------------------SCCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred -----c-----cc-------------------------cccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccC
Confidence 0 00 024556899999998885 6778888888999999988764
No 151
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.60 E-value=9.7e-15 Score=96.19 Aligned_cols=107 Identities=20% Similarity=0.173 Sum_probs=78.1
Q ss_pred EeecCCCCeeecCcc-CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccC-CeEEEEeeCCCCCCCCCCCHHHHHHHHHH
Q 030845 16 TVKDSKGKDVDLSIY-KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHK-GLEILAFPCNQFLKQEPGTSQEAHEFACT 93 (170)
Q Consensus 16 ~l~~~~G~~v~l~~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~v~vi~vs~d~~~~~~~~~~~~~~~~~~~ 93 (170)
.+..+++..+...-. .++++||+||++||++|+.+.|.|.++.+++++. ++.++.|.++. .
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~------~----------- 70 (133)
T 2dj3_A 8 PVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA------N----------- 70 (133)
T ss_dssp SSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT------S-----------
T ss_pred ceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc------C-----------
Confidence 345556665544333 4899999999999999999999999999999853 58888886542 0
Q ss_pred hcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEE-ecC-CCCCchhHHHHHHHHhh
Q 030845 94 RYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIG-RYS-PTTSPMAIEGDIKNALG 168 (170)
Q Consensus 94 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~-~~~-g~~~~~~~~~~l~~ll~ 168 (170)
+.+. . .++|..+|+++++++.|.+.. ++. |..+.+++.+.|++++.
T Consensus 71 ------~~~~---------~--------------~~~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 71 ------DITN---------D--------------QYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHAT 118 (133)
T ss_dssp ------CCCC---------S--------------SCCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSS
T ss_pred ------HHHH---------h--------------hcCCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcc
Confidence 0000 0 047888899999998876542 455 55788899999998875
No 152
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.60 E-value=5.7e-15 Score=94.16 Aligned_cols=90 Identities=16% Similarity=0.222 Sum_probs=74.2
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+++++|.||++||++|+.+.+.+.++.++++++ +.++.|+++. .. ..+ .+
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~-------~~----~l~-~~---------------- 71 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES-FGFYYVDVEE-------EK----TLF-QR---------------- 71 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc-eEEEEEECCc-------Ch----hHH-Hh----------------
Confidence 5799999999999999999999999999999864 9999998762 12 222 22
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++.
T Consensus 72 ------------------~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 72 ------------------FSLKGVPQILYF-KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp ------------------TTCCSSCEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred ------------------cCCCcCCEEEEE-ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 356667898888 799999999998888999999998875
No 153
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.60 E-value=2.5e-15 Score=95.30 Aligned_cols=90 Identities=17% Similarity=0.183 Sum_probs=73.5
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+++++|.||++||++|..+.+.+.++.+++++. +.++.|+++. .. ..+ ++
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~---------------- 67 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK-LLVAKLDVDE-------NP----KTA-MR---------------- 67 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc-eEEEEEECCC-------CH----hHH-Hh----------------
Confidence 5799999999999999999999999999999864 9999998763 21 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++.
T Consensus 68 ------------------~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 68 ------------------YRVMSIPTVILF-KDGQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred ------------------CCCCcCCEEEEE-eCCcEeeeEeCCCCHHHHHHHHHHHhh
Confidence 356667898888 899999999998888899999988765
No 154
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.59 E-value=7.8e-16 Score=109.44 Aligned_cols=104 Identities=11% Similarity=0.171 Sum_probs=80.9
Q ss_pred eecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcC
Q 030845 17 VKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYK 96 (170)
Q Consensus 17 l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
+.+.++..+......++++||.||++||++|..+.|.+.++.+++++. +.++.|+++. .. ..+ .+
T Consensus 99 v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~~~-------~~----~l~-~~-- 163 (210)
T 3apq_A 99 IITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIGAVNCGD-------DR----MLC-RM-- 163 (210)
T ss_dssp SEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTT-------CH----HHH-HH--
T ss_pred eEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc-eEEEEEECCc-------cH----HHH-HH--
Confidence 344444444333346899999999999999999999999999999764 9999998763 21 222 22
Q ss_pred CCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 97 AEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 97 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|+++++ ++|+++.++.|..+.+++.+.|++++.
T Consensus 164 --------------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~ 202 (210)
T 3apq_A 164 --------------------------------KGVNSYPSLFIF-RSGMAAVKYNGDRSKESLVAFAMQHVR 202 (210)
T ss_dssp --------------------------------TTCCSSSEEEEE-CTTSCCEECCSCCCHHHHHHHHHHHHH
T ss_pred --------------------------------cCCCcCCeEEEE-ECCCceeEecCCCCHHHHHHHHHHhCc
Confidence 256667898888 999999999998889999999998875
No 155
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.59 E-value=5.3e-15 Score=96.39 Aligned_cols=89 Identities=20% Similarity=0.250 Sum_probs=69.3
Q ss_pred cCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCC
Q 030845 30 YKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNG 109 (170)
Q Consensus 30 ~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (170)
.++|+++|.||++||++|+.+.|.+.++.++++ ++.++.|+.+. .. .+.+ .+
T Consensus 35 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~-------~~---~~~~-~~--------------- 86 (124)
T 1faa_A 35 AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ-------EN---KTLA-KE--------------- 86 (124)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS-------TT---HHHH-HH---------------
T ss_pred cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc-------ch---HHHH-HH---------------
Confidence 468999999999999999999999999999987 48899987652 11 1222 12
Q ss_pred CCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 110 PNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+ ++++++|+++.++.|.. .+++.+.|++++
T Consensus 87 -------------------~~v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 87 -------------------LGIRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp -------------------HCCSSSSE-EEEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred -------------------cCCCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 25666788 66669999999988874 778888888765
No 156
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.59 E-value=9.4e-18 Score=115.13 Aligned_cols=112 Identities=10% Similarity=0.072 Sum_probs=78.3
Q ss_pred ccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHH
Q 030845 12 IYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFA 91 (170)
Q Consensus 12 ~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~ 91 (170)
.+++.+.+.+ +.+.....+||++||+||++||++|+.+.|.|.++.+.++. ++.++.|++|. ..+. ..
T Consensus 27 ~~~i~w~~~~-~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~-------~~~~---~~ 94 (164)
T 1sen_A 27 GDHIHWRTLE-DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLED-------EEEP---KD 94 (164)
T ss_dssp CTTSCBCCHH-HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEG-------GGSC---SC
T ss_pred cccccccCHH-HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecC-------CchH---HH
Confidence 4455554544 44566666899999999999999999999999997665543 36677776552 0000 00
Q ss_pred HHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCC----------CCchhHHH
Q 030845 92 CTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPT----------TSPMAIEG 161 (170)
Q Consensus 92 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~----------~~~~~~~~ 161 (170)
..++ ..+..+|+++++|++|+++.+..|. .+.+++.+
T Consensus 95 -~~~~--------------------------------~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~ 141 (164)
T 1sen_A 95 -EDFS--------------------------------PDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQ 141 (164)
T ss_dssp -GGGC--------------------------------TTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHH
T ss_pred -HHhc--------------------------------ccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHH
Confidence 0110 1234579999999999999988874 56788888
Q ss_pred HHHHHhh
Q 030845 162 DIKNALG 168 (170)
Q Consensus 162 ~l~~ll~ 168 (170)
.|+++++
T Consensus 142 ~l~~~l~ 148 (164)
T 1sen_A 142 GMKEAQE 148 (164)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888775
No 157
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=7e-15 Score=96.10 Aligned_cols=89 Identities=13% Similarity=0.093 Sum_probs=71.0
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
+++ +||.||++||++|+.+.|.+.++.+++++.++.++.|+++. .. ..+ ++
T Consensus 22 ~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~-------~~----~~~-~~---------------- 72 (126)
T 1x5e_A 22 EGD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE-------QP----GLS-GR---------------- 72 (126)
T ss_dssp SSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC-------CH----HHH-HH----------------
Confidence 444 89999999999999999999999999987679999998762 11 122 22
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|++ .++.|..+.+++.+.|++++.
T Consensus 73 ------------------~~v~~~Pt~~~~-~~G~~-~~~~G~~~~~~l~~~l~~~~~ 110 (126)
T 1x5e_A 73 ------------------FIINALPTIYHC-KDGEF-RRYQGPRTKKDFINFISDKEW 110 (126)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEE-EECCSCCCHHHHHHHHHTCGG
T ss_pred ------------------cCCcccCEEEEE-eCCeE-EEeecCCCHHHHHHHHHHHhh
Confidence 356667899999 89995 678898888899999988764
No 158
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.58 E-value=1.7e-14 Score=92.20 Aligned_cols=89 Identities=11% Similarity=0.125 Sum_probs=71.2
Q ss_pred cCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCC
Q 030845 30 YKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNG 109 (170)
Q Consensus 30 ~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (170)
..+++++|.||++||++|..+.+.+.++.++++ ++.++.|+.|. ..+ .+ .+
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------~~~----~~-~~--------------- 74 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDE-------LKA----VA-EE--------------- 74 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT-------CHH----HH-HH---------------
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccc-------cHH----HH-Hh---------------
Confidence 358999999999999999999999999999986 59999998762 221 12 11
Q ss_pred CCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 110 PNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.| .+++++.+.|+++++
T Consensus 75 -------------------~~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 75 -------------------WNVEAMPTFIFL-KDGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp -------------------HHCSSTTEEEEE-ETTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred -------------------CCCCcccEEEEE-eCCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 245566887777 79999999888 578889999998875
No 159
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.58 E-value=8.8e-15 Score=95.85 Aligned_cols=89 Identities=12% Similarity=0.232 Sum_probs=71.3
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.++++||.||++||++|..+.+.|.++.++++ ++.++.|++|. .. +.+ ++
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~-------~~----~l~-~~---------------- 85 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADN-------NS----EIV-SK---------------- 85 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTT-------CH----HHH-HH----------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC-------CH----HHH-HH----------------
Confidence 67999999999999999999999999999984 49999998762 11 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
+++..+|+++++ ++|+++.++.| .+++++.+.|++++++
T Consensus 86 ------------------~~v~~~Pt~~i~-~~G~~~~~~~G-~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 86 ------------------CRVLQLPTFIIA-RSGKMLGHVIG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred ------------------cCCCcccEEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHhcC
Confidence 356667886655 89999999988 5788899999988753
No 160
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.57 E-value=5.2e-15 Score=95.52 Aligned_cols=89 Identities=20% Similarity=0.227 Sum_probs=68.9
Q ss_pred CccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeec
Q 030845 28 SIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRV 107 (170)
Q Consensus 28 ~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (170)
++.++|+++|.||++||++|+.+.+.+.++.+++ ++.++.|+.|. .. +.+ ++
T Consensus 29 ~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~-------~~----~~~-~~------------- 80 (117)
T 2xc2_A 29 EQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDK-------LE----ETA-RK------------- 80 (117)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTT-------SH----HHH-HH-------------
T ss_pred HhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCc-------cH----HHH-HH-------------
Confidence 3347899999999999999999999999999888 59999998652 11 222 12
Q ss_pred CCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 108 NGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.| .+++++.+.|++++
T Consensus 81 ---------------------~~v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 81 ---------------------YNISAMPTFIAI-KNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp ---------------------TTCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred ---------------------cCCCccceEEEE-eCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 256667885555 89999999988 57778888887764
No 161
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.57 E-value=3.5e-15 Score=98.94 Aligned_cols=91 Identities=12% Similarity=0.145 Sum_probs=69.0
Q ss_pred EEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCH---HHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 34 VLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTS---QEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 34 ~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
+++|+||++||++|+.+.|.+.++.++++ +.++.|+++. .... +...+.+ .+
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~-----~~~~~~~d~~~~l~-~~---------------- 87 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGS-----LIGERELSAARLEM-NK---------------- 87 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECT-----TCCHHHHHHHHHHH-HH----------------
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCC-----chhhhhhhhhHHHH-HH----------------
Confidence 89999999999999999999999999885 8888888753 1111 1111222 11
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|++++++ +|+++.++.|..+.+.+.+.++++++
T Consensus 88 ------------------~~v~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~i~~~~~ 126 (135)
T 3emx_A 88 ------------------AGVEGTPTLVFYK-EGRIVDKLVGATPWSLKVEKAREIYG 126 (135)
T ss_dssp ------------------HTCCSSSEEEEEE-TTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred ------------------cCCceeCeEEEEc-CCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 3677789766655 99999999999888888888888865
No 162
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.57 E-value=1.2e-14 Score=107.78 Aligned_cols=90 Identities=13% Similarity=0.163 Sum_probs=73.5
Q ss_pred cCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCC
Q 030845 30 YKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNG 109 (170)
Q Consensus 30 ~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (170)
.++|+++|+||++||++|+.+.|.+.++.+++++. +.++.|++|. .. ..+ .+
T Consensus 24 ~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~-------~~----~~~-~~--------------- 75 (287)
T 3qou_A 24 SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAKLDCDA-------EQ----MIA-AQ--------------- 75 (287)
T ss_dssp TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEEEETTT-------CH----HHH-HT---------------
T ss_pred cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEEeCcc-------CH----HHH-HH---------------
Confidence 35899999999999999999999999999999864 9999998763 21 222 22
Q ss_pred CCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 110 PNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
++|..+|+++++ ++|+++.++.|..+.+.+.+.|...+
T Consensus 76 -------------------~~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 76 -------------------FGLRAIPTVYLF-QNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp -------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred -------------------cCCCCCCeEEEE-ECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 356677898888 79999999999888888888887654
No 163
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.57 E-value=1.7e-14 Score=91.58 Aligned_cols=87 Identities=18% Similarity=0.207 Sum_probs=68.2
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|+++|.||++||++|+.+.|.+.++.++++ ++.++.|+++. .. ..+ .+
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~-------~~----~~~-~~---------------- 69 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQ-------CQ----GTA-AT---------------- 69 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHH-HH----------------
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECcc-------CH----HHH-Hh----------------
Confidence 57999999999999999999999999999994 49999998762 11 122 22
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.|. .++++.+.|++++
T Consensus 70 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 106 (107)
T 1gh2_A 70 ------------------NNISATPTFQFF-RNKVRIDQYQGA-DAVGLEEKIKQHL 106 (107)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHH
T ss_pred ------------------cCCCcccEEEEE-ECCeEEEEEeCC-CHHHHHHHHHHhc
Confidence 356667887777 899999999885 4556888887765
No 164
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.56 E-value=1.2e-14 Score=93.58 Aligned_cols=85 Identities=24% Similarity=0.349 Sum_probs=66.1
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
+||+++|.||++||++|+.+.+.|.++.+++++ +.++.|++|. .. +.+ ++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~-------~~----~l~-~~---------------- 78 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDE-------SP----DIA-KE---------------- 78 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------CH----HHH-HH----------------
Confidence 579999999999999999999999999999876 9999998762 21 222 22
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHH
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKN 165 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ 165 (170)
+++..+|+++++ ++|+++.++.|.. ++++.+.|++
T Consensus 79 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 79 ------------------CEVTAMPTFVLG-KDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp ------------------TTCCSBSEEEEE-ETTEEEEEEESSC-HHHHHHHHHT
T ss_pred ------------------CCCCcccEEEEE-eCCeEEEEEeCCC-HHHHHHHHHh
Confidence 255666886665 9999999998876 6666666653
No 165
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.56 E-value=1.3e-14 Score=91.27 Aligned_cols=88 Identities=17% Similarity=0.254 Sum_probs=69.1
Q ss_pred cCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCC
Q 030845 30 YKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNG 109 (170)
Q Consensus 30 ~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (170)
..+++++|.||++||++|..+.+.+.++.++++ ++.++.|+.+. .. +.+ ++
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~----~~~-~~--------------- 67 (104)
T 2vim_A 17 NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQ-------NE----EAA-AK--------------- 67 (104)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------CH----HHH-HH---------------
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccC-------CH----HHH-HH---------------
Confidence 468999999999999999999999999999986 59999998752 11 222 12
Q ss_pred CCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 110 PNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.| .+.+++.+.|++++
T Consensus 68 -------------------~~v~~~Pt~~~~-~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 68 -------------------YSVTAMPTFVFI-KDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp -------------------TTCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred -------------------cCCccccEEEEE-eCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 255667886666 59999999988 57788888887764
No 166
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.56 E-value=1.3e-14 Score=98.16 Aligned_cols=88 Identities=9% Similarity=0.089 Sum_probs=71.5
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
++|++||+||++||++|+.+.|.+.++.++++ ++.++.|+++. .. ..+ ++
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~-------~~----~l~-~~---------------- 80 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEG-------VP----EVS-EK---------------- 80 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHH-HH----------------
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCC-------CH----HHH-HH----------------
Confidence 48999999999999999999999999999984 59999998762 11 222 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|++++++ +|+++.++.|. .++++.+.|++++.
T Consensus 81 ------------------~~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l~ 118 (153)
T 2wz9_A 81 ------------------YEISSVPTFLFFK-NSQKIDRLDGA-HAPELTKKVQRHAS 118 (153)
T ss_dssp ------------------TTCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHSC
T ss_pred ------------------cCCCCCCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHHHhc
Confidence 3566779999999 99999998885 67789999988875
No 167
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.56 E-value=1.6e-14 Score=92.40 Aligned_cols=88 Identities=10% Similarity=0.085 Sum_probs=69.9
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+++++|.||++||++|..+.+.|.++.++++ ++.++.|+++. .. +.+ ++
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~-------~~----~l~-~~---------------- 67 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEA-------RP----ELM-KE---------------- 67 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGG-------CH----HHH-HH----------------
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcC-------CH----HHH-HH----------------
Confidence 56899999999999999999999999999886 48888887542 11 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.|..+++++.+.|+...
T Consensus 68 ------------------~~v~~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 68 ------------------LGFERVPTLVFI-RDGKVAKVFSGIMNPRELQALYASIH 105 (110)
T ss_dssp ------------------TTCCSSCEEEEE-ESSSEEEEEESCCCHHHHHHHHHTC-
T ss_pred ------------------cCCcccCEEEEE-ECCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 356667899999 99999999999888898888887653
No 168
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.56 E-value=1.7e-14 Score=92.47 Aligned_cols=88 Identities=13% Similarity=0.149 Sum_probs=69.2
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|+++|+||++||++|..+.+.+.++.++++ ++.++.|+++. .. ..+ .+
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~-------~~----~~~-~~---------------- 74 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDE-------VS----EVT-EK---------------- 74 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------TH----HHH-HH----------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCC-------CH----HHH-HH----------------
Confidence 67999999999999999999999999999986 49999998762 11 222 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|+++++ ++|+++.++.|. +.+++.+.|+++++
T Consensus 75 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 112 (112)
T 1syr_A 75 ------------------ENITSMPTFKVY-KNGSSVDTLLGA-NDSALKQLIEKYAA 112 (112)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHTTC-
T ss_pred ------------------cCCCcccEEEEE-ECCcEEEEEeCC-CHHHHHHHHHHhhC
Confidence 256667885555 799999999988 88888888887653
No 169
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.56 E-value=2.8e-14 Score=90.07 Aligned_cols=89 Identities=17% Similarity=0.273 Sum_probs=68.9
Q ss_pred cCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCC
Q 030845 30 YKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNG 109 (170)
Q Consensus 30 ~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (170)
.++++++|.||++||++|....+.+.++.+++++ ++.++.|+.+. .. ..+ .+
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~-------~~----~~~-~~--------------- 69 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDE-------CE----DIA-ME--------------- 69 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT-------CH----HHH-HH---------------
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccc-------hH----HHH-HH---------------
Confidence 4689999999999999999999999999999874 59999998752 11 222 12
Q ss_pred CCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 110 PNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.| .+++++.+.|++++
T Consensus 70 -------------------~~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 70 -------------------YNISSMPTFVFL-KNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp -------------------TTCCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred -------------------cCCCcccEEEEE-cCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 255667885555 89999999988 57777888877654
No 170
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.56 E-value=9.8e-15 Score=94.40 Aligned_cols=90 Identities=16% Similarity=0.162 Sum_probs=65.3
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.|++++|+||++|||+|+.+.|.|.++.++++. .++.+.++. ..+.+....++ .+
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~~~~-----~~~~~~~~~~~-~~---------------- 82 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA---HIYFINSEE-----PSQLNDLQAFR-SR---------------- 82 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC---CCEEEETTC-----GGGHHHHHHHH-HH----------------
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC---eEEEEECCC-----cCcHHHHHHHH-HH----------------
Confidence 578999999999999999999999999998753 344444442 01223333443 22
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHH
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIK 164 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~ 164 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+
T Consensus 83 ------------------~~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 83 ------------------YGIPTVPGFVHI-TDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp ------------------HTCCSSCEEEEE-ETTEEEEECCTTCCHHHHHHHHT
T ss_pred ------------------cCCCCCCeEEEE-ECCEEEEEecCCCCHHHHHHHhh
Confidence 356677898888 59999999999888777776653
No 171
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.56 E-value=3.3e-14 Score=94.60 Aligned_cols=104 Identities=14% Similarity=0.189 Sum_probs=72.7
Q ss_pred ecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCC
Q 030845 18 KDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKA 97 (170)
Q Consensus 18 ~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~ 97 (170)
...+++.+...-..++.++|+||++||++|..+.+.|.++.+++++. +.++.|+++. .. ..+ ++
T Consensus 36 ~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~~----~l~-~~--- 99 (140)
T 1v98_A 36 VEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGR-LKVVKVNVDE-------HP----GLA-AR--- 99 (140)
T ss_dssp -------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------CH----HHH-HH---
T ss_pred ccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCC-------CH----HHH-HH---
Confidence 34444544333223333999999999999999999999999999864 9999998763 11 222 12
Q ss_pred CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 98 EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 98 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++..
T Consensus 100 -------------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 100 -------------------------------YGVRSVPTLVLF-RRGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp -------------------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred -------------------------------CCCCccCEEEEE-eCCcEEEEEeCCCCHHHHHHHHHHHHcc
Confidence 256667888888 7999999999988889999999988753
No 172
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.55 E-value=7.9e-15 Score=98.59 Aligned_cols=90 Identities=7% Similarity=-0.043 Sum_probs=70.0
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.++++||.|||+||++|+.+.|.|.++.++++++ +.++-|.+|. .+ +++ .+
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVDe-------~~----e~a-~~---------------- 90 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDITE-------VP----DFN-TM---------------- 90 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTT-------CC----TTT-TT----------------
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECCC-------CH----HHH-HH----------------
Confidence 4689999999999999999999999999999765 8899998763 11 111 11
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEE--E-------ecCCCCC-chhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVI--G-------RYSPTTS-PMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~--~-------~~~g~~~-~~~~~~~l~~ll~ 168 (170)
++|..+||++++ ++|+.+ . +..|..+ .+++.+.|+++++
T Consensus 91 ------------------y~V~siPT~~fF-k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 91 ------------------YELYDPVSVMFF-YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp ------------------TTCCSSEEEEEE-ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred ------------------cCCCCCCEEEEE-ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHH
Confidence 467778897666 677776 4 7888766 7788888888765
No 173
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.55 E-value=1.1e-14 Score=94.29 Aligned_cols=91 Identities=15% Similarity=0.183 Sum_probs=73.0
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+++++|.||++||++|+.+.+.+.++.+++++. +.++.|+++. .. ..+ .+
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~---------------- 79 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATD-LTVAKLDVDT-------NP----ETA-RN---------------- 79 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH----HHH-Hh----------------
Confidence 5789999999999999999999999999999764 9999998763 21 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++..
T Consensus 80 ------------------~~i~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 80 ------------------FQVVSIPTLILF-KDGQPVKRIVGAKGKAALLRELSDVVPN 119 (121)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTCSCCCC
T ss_pred ------------------cCCCcCCEEEEE-ECCEEEEEecCCCCHHHHHHHHHHHHhh
Confidence 256667887777 6999999999988888888888877764
No 174
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.55 E-value=4.8e-14 Score=93.10 Aligned_cols=88 Identities=11% Similarity=0.084 Sum_probs=72.8
Q ss_pred cEEEEEEecCCC--CCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 33 KVLLIVNVASKC--GFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 33 k~~ll~f~~~~C--~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
+++||.|||+|| ++|+.+.|.|.++.++|+++ +.++-|++| +..+.+ .+
T Consensus 34 ~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvD-----------e~~~la-~~---------------- 84 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAE-----------AERGLM-AR---------------- 84 (137)
T ss_dssp SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGG-----------GHHHHH-HH----------------
T ss_pred CcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECC-----------CCHHHH-HH----------------
Confidence 599999999999 99999999999999999765 999999654 223333 23
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
|+|..+||++++ ++|+++.+..|..+.+++.+.|+++++
T Consensus 85 ------------------ygV~siPTlilF-kdG~~v~~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 85 ------------------FGVAVCPSLAVV-QPERTLGVIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp ------------------HTCCSSSEEEEE-ECCEEEEEEESCCCHHHHHHHHHHHHH
T ss_pred ------------------cCCccCCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 367778897776 999999999999888889999988763
No 175
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.54 E-value=2.9e-14 Score=91.81 Aligned_cols=89 Identities=18% Similarity=0.241 Sum_probs=70.4
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|+++|.||++||++|..+.+.+.++.++++ ++.++.|++|. .. ..+ ++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~----~~~-~~---------------- 76 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDE-------LK----DVA-EA---------------- 76 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHH-HH----------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEccc-------CH----HHH-HH----------------
Confidence 48999999999999999999999999999987 59999998652 11 222 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
+++..+|+++++ ++|+++.++.| .+++++.+.|+++++.
T Consensus 77 ------------------~~v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 77 ------------------YNVEAMPTFLFI-KDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp ------------------TTCCSBSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred ------------------cCCCcCcEEEEE-eCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 255666887666 89999999888 4788899999888753
No 176
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.53 E-value=5.8e-14 Score=89.35 Aligned_cols=89 Identities=15% Similarity=0.173 Sum_probs=70.4
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccC--CeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHK--GLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVN 108 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 108 (170)
.+++++|.||++||++|+.+.+.+.++.+++.+. ++.++.|+++. .. ..+ ++
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~l~-~~-------------- 73 (111)
T 3uvt_A 20 AEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA-------ER----NIC-SK-------------- 73 (111)
T ss_dssp HSSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT-------CH----HHH-HH--------------
T ss_pred cCCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc-------cH----hHH-Hh--------------
Confidence 3789999999999999999999999999998654 68899997652 22 122 22
Q ss_pred CCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHH
Q 030845 109 GPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNA 166 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~l 166 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++.
T Consensus 74 --------------------~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 74 --------------------YSVRGYPTLLLF-RGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp --------------------TTCCSSSEEEEE-ETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred --------------------cCCCcccEEEEE-eCCcEEEeccCCcCHHHHHHHHHhc
Confidence 256667887766 8999999999988888888888753
No 177
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.53 E-value=3.3e-14 Score=93.10 Aligned_cols=104 Identities=10% Similarity=-0.020 Sum_probs=75.6
Q ss_pred eecCCCCeeecCcc-CCcEEEEEEecCCCCCchHhHHHHHHHHHHhcc----CCeEEEEeeCCCCCCCCCCCHHHHHHHH
Q 030845 17 VKDSKGKDVDLSIY-KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKH----KGLEILAFPCNQFLKQEPGTSQEAHEFA 91 (170)
Q Consensus 17 l~~~~G~~v~l~~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~----~~v~vi~vs~d~~~~~~~~~~~~~~~~~ 91 (170)
+..++++.+...-. .++++||.||++||++|+.+.|.+.++.+++.. .++.++.|.++. . .+.+
T Consensus 17 v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~-------~----~~l~ 85 (127)
T 3h79_A 17 VVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK-------Y----PDVI 85 (127)
T ss_dssp CEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT-------C----HHHH
T ss_pred eEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc-------c----HhHH
Confidence 44455555433222 479999999999999999999999999988752 258889887652 1 1222
Q ss_pred HHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEE-EecCCCCCchhHHHHHHHH
Q 030845 92 CTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVI-GRYSPTTSPMAIEGDIKNA 166 (170)
Q Consensus 92 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~-~~~~g~~~~~~~~~~l~~l 166 (170)
.+ ++|..+|+++++++.+.+. .++.|..+.+++.+.|+++
T Consensus 86 -~~----------------------------------~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 86 -ER----------------------------------MRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp -HH----------------------------------TTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred -Hh----------------------------------cCCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 22 3566779999998877754 5678888888888888764
No 178
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.53 E-value=5.4e-14 Score=94.09 Aligned_cols=90 Identities=11% Similarity=-0.036 Sum_probs=68.3
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+++++|+||++||++|+.+.|.|.++.+++++. +.++.|++|. .. +.+ ++
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~-------~~----~~~-~~---------------- 72 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITE-------VP----DFN-KM---------------- 72 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTT-------CC----TTT-TS----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEEEEcccc-------CH----HHH-HH----------------
Confidence 4799999999999999999999999999999764 9999998763 10 001 11
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEe---------cCCCCC-chhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGR---------YSPTTS-PMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~---------~~g~~~-~~~~~~~l~~ll~ 168 (170)
++|..+|+++++ ++|+++.+ ..|..+ .+++.+.|+++++
T Consensus 73 ------------------~~i~~~Pt~~~~-~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~ 121 (142)
T 1qgv_A 73 ------------------YELYDPCTVMFF-FRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYR 121 (142)
T ss_dssp ------------------SCSCSSCEEEEE-ETTEEEEEECC------CCSCCSCHHHHHHHHHHHHH
T ss_pred ------------------cCCCCCCEEEEE-ECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHH
Confidence 367778998888 58888763 444443 6778888887765
No 179
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.53 E-value=6.7e-14 Score=92.75 Aligned_cols=91 Identities=8% Similarity=0.034 Sum_probs=74.1
Q ss_pred CCcEEEEEEecCC--CCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecC
Q 030845 31 KGKVLLIVNVASK--CGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVN 108 (170)
Q Consensus 31 ~gk~~ll~f~~~~--C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 108 (170)
.++++||+||++| |++|+.+.|.|.++.++|+++.+.++-|+ .++..+.+ .+
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVd-----------vDe~~~lA-~~-------------- 86 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIAD-----------LEQSEAIG-DR-------------- 86 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECC-----------HHHHHHHH-HH--------------
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEE-----------CCCCHHHH-HH--------------
Confidence 4578999999999 99999999999999999976448898885 44444554 23
Q ss_pred CCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 109 GPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
|+|..+||++++ ++|+++.+..|..+.+++.+.|+++++
T Consensus 87 --------------------ygV~sIPTlilF-k~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 87 --------------------FGAFRFPATLVF-TGGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp --------------------HTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred --------------------cCCccCCEEEEE-ECCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 367778886666 999999999998888899999988774
No 180
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.53 E-value=6.9e-15 Score=95.31 Aligned_cols=101 Identities=15% Similarity=0.159 Sum_probs=75.2
Q ss_pred eecCCCCeeecCc-c--CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHH
Q 030845 17 VKDSKGKDVDLSI-Y--KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACT 93 (170)
Q Consensus 17 l~~~~G~~v~l~~-~--~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~ 93 (170)
+.+.+|+..++.+ . .++++||.||++||++|+.+.+.|.++.+++ .++.++.|+++. .. ..+ +
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~-------~~----~~~-~ 70 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDK-------NG----NAA-D 70 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT-------CH----HHH-H
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCC-------CH----HHH-H
Confidence 3455666656652 3 4899999999999999999999999999998 459999998763 21 122 1
Q ss_pred hcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECC---CCcEEEecCCCCCchhHHHHHHHH
Q 030845 94 RYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDT---EGNVIGRYSPTTSPMAIEGDIKNA 166 (170)
Q Consensus 94 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~---~G~i~~~~~g~~~~~~~~~~l~~l 166 (170)
+ +++..+|++++++. +|+++.++.|.. ++++.+.+++.
T Consensus 71 ~----------------------------------~~i~~~Pt~~~~~~~~~~G~~~~~~~G~~-~~~l~~~~~~~ 111 (118)
T 2f51_A 71 A----------------------------------YGVSSIPALFFVKKEGNEIKTLDQFVGAD-VSRIKADIEKF 111 (118)
T ss_dssp H----------------------------------TTCCSSSEEEEEEEETTEEEEEEEEESCC-HHHHHHHHHHH
T ss_pred h----------------------------------cCCCCCCEEEEEeCCCCcceEEEeecCCC-HHHHHHHHHHh
Confidence 2 35666789999976 499999998864 45577777654
No 181
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.52 E-value=1.3e-14 Score=94.23 Aligned_cols=91 Identities=14% Similarity=0.036 Sum_probs=71.2
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+++++|.||++||++|+.+.+.+.++.+++++ ++.++.|+++. .. +.+ .+
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~~----~~~-~~---------------- 70 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQA-------YP----QTC-QK---------------- 70 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcC-------CH----HHH-HH----------------
Confidence 578999999999999999999999999999986 49999998763 11 122 12
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCC----CCchhHHHHHHHHhhc
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPT----TSPMAIEGDIKNALGD 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~----~~~~~~~~~l~~ll~~ 169 (170)
+++..+|++++++++|. +.++.|. .+.+++.+.|+++++.
T Consensus 71 ------------------~~v~~~Pt~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 71 ------------------AGIKAYPSVKLYQYERA-KKSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp ------------------TTCCSSSEEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred ------------------cCCCccceEEEEeCCCc-cceeeccccCcCCHHHHHHHHHHHHHh
Confidence 35667799999988887 4445443 6888999999988764
No 182
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1.1e-14 Score=96.60 Aligned_cols=93 Identities=19% Similarity=0.072 Sum_probs=68.7
Q ss_pred ccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecC
Q 030845 29 IYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVN 108 (170)
Q Consensus 29 ~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 108 (170)
..++++++|+||++||++|+.+.|.+.++.+++++.++.++.|.++. .. ..+ +++++...
T Consensus 23 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~-------~~----~~~-~~~~v~~~-------- 82 (137)
T 2dj0_A 23 RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR-------YT----DVS-TRYKVSTS-------- 82 (137)
T ss_dssp HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT-------CH----HHH-HHTTCCCC--------
T ss_pred cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc-------CH----HHH-HHccCccc--------
Confidence 34567999999999999999999999999999987679999997652 22 233 34444211
Q ss_pred CCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHH
Q 030845 109 GPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGD 162 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~ 162 (170)
.++..+|+++++ ++|+++.++.|..+.+++.+.
T Consensus 83 --------------------~~~~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~ 115 (137)
T 2dj0_A 83 --------------------PLTKQLPTLILF-QGGKEAMRRPQIDKKGRAVSW 115 (137)
T ss_dssp --------------------SSSSCSSEEEEE-SSSSEEEEESCBCSSSCBCCC
T ss_pred --------------------CCcCCCCEEEEE-ECCEEEEEecCcCchHHHHHH
Confidence 134467898888 799999999887766554433
No 183
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.51 E-value=2.1e-14 Score=102.86 Aligned_cols=90 Identities=19% Similarity=0.187 Sum_probs=74.0
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+|++||+||++||++|+.+.|.+.++.++++++ +.++.|++|. ..+ .+ ++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~-------~~~----l~-~~---------------- 79 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NPG----TA-PK---------------- 79 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CTT----TG-GG----------------
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCC-------CHH----HH-HH----------------
Confidence 5799999999999999999999999999999875 9999998763 110 01 11
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 80 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 118 (222)
T 3dxb_A 80 ------------------YGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 118 (222)
T ss_dssp ------------------GTCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred ------------------cCCCcCCEEEEE-ECCeEEEEeccccChHHHHHHHHhhcc
Confidence 367777987777 589999999999899999999998875
No 184
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.51 E-value=1.6e-14 Score=93.08 Aligned_cols=91 Identities=18% Similarity=0.202 Sum_probs=70.9
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccC--CeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHK--GLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVN 108 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 108 (170)
++|+++|.||++||++|+.+.+.+.++.+++++. ++.++.|..+. .. ..+
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-------~~----~~~----------------- 74 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE-------ES----DLA----------------- 74 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT-------CC----SSH-----------------
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC-------CH----HHH-----------------
Confidence 6799999999999999999999999999999864 47777776542 00 011
Q ss_pred CCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEE--EecCCCCCchhHHHHHHHHhh
Q 030845 109 GPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVI--GRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~--~~~~g~~~~~~~~~~l~~ll~ 168 (170)
.. +++..+|+++++ ++|+++ .++.|..+.+++.+.|++++.
T Consensus 75 --------~~----------~~v~~~Pt~~~~-~~g~~~~~~~~~g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 75 --------QQ----------YGVRGYPTIKFF-RNGDTASPKEYTAGREADDIVNWLKKRTG 117 (120)
T ss_dssp --------HH----------HTCCSSSEEEEE-ESSCSSSCEECCCCSSHHHHHHHHHTTSC
T ss_pred --------HH----------CCCCcccEEEEE-eCCCcCCcccccCccCHHHHHHHHHhccC
Confidence 11 367778999999 788876 788888888899999988764
No 185
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.50 E-value=1.3e-14 Score=94.71 Aligned_cols=89 Identities=19% Similarity=0.188 Sum_probs=67.5
Q ss_pred CCcEEEEEEecCCCC--------------CchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcC
Q 030845 31 KGKVLLIVNVASKCG--------------FTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYK 96 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~--------------~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
.||+++|.||++||+ +|+.+.|.+.++.+++++. +.++.|++|. .. ..+ .+
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~-~~~~~vd~d~-------~~----~l~-~~-- 84 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP----GTA-PK-- 84 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTS-------CT----TTG-GG--
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH----HHH-HH--
Confidence 579999999999999 9999999999999998764 9999998763 10 011 11
Q ss_pred CCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 97 AEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 97 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 85 --------------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 85 --------------------------------YGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp --------------------------------GTCCBSSEEEEE-ESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred --------------------------------cCCCccCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 467788999999 99999999999888888888887765
No 186
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.48 E-value=4.3e-15 Score=97.39 Aligned_cols=90 Identities=19% Similarity=0.245 Sum_probs=69.9
Q ss_pred cCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCC
Q 030845 30 YKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNG 109 (170)
Q Consensus 30 ~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (170)
..+|+++|.||++||++|+.+.+.|.++.++++ ++.++.|++|. .. ..+ .+
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------~~----~~~-~~--------------- 84 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDE-------LK----EVA-EK--------------- 84 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTT-------SG----GGH-HH---------------
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccc-------hH----HHH-HH---------------
Confidence 358999999999999999999999999999986 58888887652 11 111 11
Q ss_pred CCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 110 PNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
+++..+|+++++ ++|+++.++.| .+.+++.+.|+++++.
T Consensus 85 -------------------~~v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 85 -------------------YNVEAMPTFLFI-KDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp -------------------HTCCSSCCCCBC-TTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred -------------------cCCCccceEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 256667885555 89999998888 4788899999988753
No 187
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.48 E-value=1.1e-13 Score=99.72 Aligned_cols=104 Identities=15% Similarity=0.195 Sum_probs=78.4
Q ss_pred eecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCC--eEEEEeeCCCCCCCCCCCHHHHHHHHHHh
Q 030845 17 VKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKG--LEILAFPCNQFLKQEPGTSQEAHEFACTR 94 (170)
Q Consensus 17 l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~--v~vi~vs~d~~~~~~~~~~~~~~~~~~~~ 94 (170)
+..++++.+.....++++++|+||++||++|+.+.|.+.++.+++++.+ +.++.|.++. .. ..+ .+
T Consensus 17 v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~l~-~~ 84 (241)
T 3idv_A 17 VLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS-------AS----VLA-SR 84 (241)
T ss_dssp EEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT-------CH----HHH-HH
T ss_pred cEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC-------CH----HHH-Hh
Confidence 4445555555444578999999999999999999999999999998765 8888887652 11 222 22
Q ss_pred cCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 95 YKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 95 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|++++++ +|+++ ++.|..+.+++.+.+.+.+.
T Consensus 85 ----------------------------------~~v~~~Pt~~~~~-~g~~~-~~~g~~~~~~l~~~i~~~~~ 122 (241)
T 3idv_A 85 ----------------------------------FDVSGYPTIKILK-KGQAV-DYEGSRTQEEIVAKVREVSQ 122 (241)
T ss_dssp ----------------------------------TTCCSSSEEEEEE-TTEEE-ECCSCSCHHHHHHHHHHHHS
T ss_pred ----------------------------------cCCCcCCEEEEEc-CCCcc-cccCcccHHHHHHHHhhccC
Confidence 3566678888885 67766 58888889999999887754
No 188
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.21 E-value=3.4e-15 Score=94.17 Aligned_cols=103 Identities=17% Similarity=0.244 Sum_probs=74.4
Q ss_pred eecCCCCeeecCc-cCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhc
Q 030845 17 VKDSKGKDVDLSI-YKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRY 95 (170)
Q Consensus 17 l~~~~G~~v~l~~-~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~ 95 (170)
+.+.++..+...- -.+|+++|.||++||++|....+.++++.+++++ ++.++.|+.+. . ...+ ++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~--------~---~~~~-~~- 68 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE--------N---PNTA-AQ- 68 (106)
Confidence 3344444443222 2578999999999999999999999999999875 48888886542 1 1111 11
Q ss_pred CCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 96 KAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 96 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++...|+++++ ++|+++.++.|..+.+++.+.|+++|
T Consensus 69 ---------------------------------~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 69 ---------------------------------YGIRSIPTLLLF-KNGQVVDRLVGAQPKEALKERIDKHL 106 (106)
Confidence 256667898888 89999999998888888888887654
No 189
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.46 E-value=1.9e-13 Score=82.92 Aligned_cols=83 Identities=17% Similarity=0.181 Sum_probs=64.7
Q ss_pred cEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCCCC
Q 030845 33 KVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNA 112 (170)
Q Consensus 33 k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (170)
.++++.||++|||+|....+.|+++.+++++ ++.++.|+++. .. +.+ ++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~----~~~-~~------------------ 51 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVME-------NP----QKA-ME------------------ 51 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSS-------SC----CTT-TS------------------
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCC-------CH----HHH-HH------------------
Confidence 5789999999999999999999999999974 49999998752 00 000 00
Q ss_pred chHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 113 EPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+++..+|++++ +|++ ++.|..+.+++.+.|++++
T Consensus 52 ----------------~~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 52 ----------------YGIMAVPTIVI---NGDV--EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp ----------------TTTCCSSEEEE---TTEE--ECCSSSSSHHHHHHHHHHC
T ss_pred ----------------CCCcccCEEEE---CCEE--eeecCCCHHHHHHHHHHhC
Confidence 36777899777 8887 7788778888999888764
No 190
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.46 E-value=1.3e-14 Score=97.94 Aligned_cols=93 Identities=12% Similarity=0.138 Sum_probs=60.6
Q ss_pred cCCcEEEEEEecCCCCCchHhHHHHHHHH--HHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeec
Q 030845 30 YKGKVLLIVNVASKCGFTDSNYSQLTDLY--NKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRV 107 (170)
Q Consensus 30 ~~gk~~ll~f~~~~C~~C~~~~~~l~~~~--~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (170)
..||++||+|||+||++|+.+.+.+.+.. .++.+ ..++.|.+|. +.... . ..
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~----e~~~~------~-~~------------- 95 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMH----ETTDK------N-LS------------- 95 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESS----CCSCG------G-GC-------------
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecC----Cchhh------H-hh-------------
Confidence 36899999999999999999999888642 22222 2344444431 00000 0 00
Q ss_pred CCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCC-------CCchh---HHHHHHHHhhc
Q 030845 108 NGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPT-------TSPMA---IEGDIKNALGD 169 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~-------~~~~~---~~~~l~~ll~~ 169 (170)
+++..+|++++++++|+++.+..|. ..+++ +.+.+++.+++
T Consensus 96 ---------------------~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al~~ 146 (151)
T 3ph9_A 96 ---------------------PDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKALRL 146 (151)
T ss_dssp ---------------------TTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHHSC
T ss_pred ---------------------cCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHHHH
Confidence 2566679999999999999999887 44444 55555555543
No 191
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.45 E-value=1.6e-13 Score=83.24 Aligned_cols=83 Identities=12% Similarity=0.134 Sum_probs=64.0
Q ss_pred EEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCCCCc
Q 030845 34 VLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAE 113 (170)
Q Consensus 34 ~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 113 (170)
++++.||++|||+|....+.|.++.+++++ ++.++.|++|. .. +.+ ++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~----~~~-~~------------------- 50 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMV-------DR----EKA-IE------------------- 50 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTT-------CG----GGG-GG-------------------
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCC-------CH----HHH-Hh-------------------
Confidence 468899999999999999999999999985 48999997652 11 111 11
Q ss_pred hHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 114 PLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 114 ~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+++..+|++++ +|++ ++.|..+.+++.+.|+++++
T Consensus 51 ---------------~~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~le 85 (85)
T 1nho_A 51 ---------------YGLMAVPAIAI---NGVV--RFVGAPSREELFEAINDEME 85 (85)
T ss_dssp ---------------TCSSCSSEEEE---TTTE--EEECSSCCHHHHHHHHHHCC
T ss_pred ---------------CCceeeCEEEE---CCEE--EEccCCCHHHHHHHHHHHhC
Confidence 36777799777 8887 66777788899999988763
No 192
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.45 E-value=2.1e-13 Score=90.33 Aligned_cols=84 Identities=14% Similarity=0.093 Sum_probs=65.2
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
+||++||+||++||++|+.+.|.|.++.+++. ++.++.|.++. .. ++
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~-------~~--------~~---------------- 75 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNS-------CI--------EH---------------- 75 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSS-------SC--------SS----------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhc-------Cc--------cc----------------
Confidence 45899999999999999999999999999985 48888887652 00 00
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCC-------CchhHHHHHHHH
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTT-------SPMAIEGDIKNA 166 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~-------~~~~~~~~l~~l 166 (170)
++|..+|+++++. +|+++.++.|.. +.+++.+.|.+.
T Consensus 76 ------------------~~i~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 76 ------------------YHDNCLPTIFVYK-NGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp ------------------CCSSCCSEEEEES-SSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred ------------------CCCCCCCEEEEEE-CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 3677789988885 999999988764 456666666554
No 193
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.44 E-value=5.7e-13 Score=89.10 Aligned_cols=88 Identities=9% Similarity=0.107 Sum_probs=62.1
Q ss_pred CcEEEEEEecCC--CCCchHhHHHHHHHHHHhccCCeE--EEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeec
Q 030845 32 GKVLLIVNVASK--CGFTDSNYSQLTDLYNKYKHKGLE--ILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRV 107 (170)
Q Consensus 32 gk~~ll~f~~~~--C~~C~~~~~~l~~~~~~~~~~~v~--vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (170)
.+.+||+||++| |++|+.+.|.|.++.+++ + ++. ++.|++| +..+.+ .+
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d-----------~~~~la-~~------------- 86 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLE-----------QSEAIG-DR------------- 86 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHH-----------HHHHHH-HT-------------
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECC-----------CCHHHH-Hh-------------
Confidence 345777888877 999999999999999999 4 477 8888543 333333 22
Q ss_pred CCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 108 NGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 87 ---------------------~~V~~iPT~~~f-k~G~~v~~~~G~~~~~~l~~~i~~~l~ 125 (142)
T 2es7_A 87 ---------------------FNVRRFPATLVF-TDGKLRGALSGIHPWAELLTLMRSIVD 125 (142)
T ss_dssp ---------------------TTCCSSSEEEEE-SCC----CEESCCCHHHHHHHHHHHHC
T ss_pred ---------------------cCCCcCCeEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 367778999999 999999999998888899999988875
No 194
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.42 E-value=1.1e-12 Score=93.76 Aligned_cols=91 Identities=10% Similarity=0.043 Sum_probs=70.3
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhcc---CCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeec
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKH---KGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRV 107 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~---~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (170)
.+++++|.||++||++|+.+.|.+.++.+++++ .++.++.|+++. .. ..+ .+
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~-------~~----~l~-~~------------- 187 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE-------YP----EWA-DQ------------- 187 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG-------CH----HHH-HH-------------
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc-------CH----HHH-Hh-------------
Confidence 345559999999999999999999999999973 359999987652 11 122 12
Q ss_pred CCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 108 NGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|+++++ ++|+.+.++.|..+.+++.+.|+++++
T Consensus 188 ---------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 226 (226)
T 1a8l_A 188 ---------------------YNVMAVPKIVIQ-VNGEDRVEFEGAYPEKMFLEKLLSALS 226 (226)
T ss_dssp ---------------------TTCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred ---------------------CCCcccCeEEEE-eCCceeEEEcCCCCHHHHHHHHHHhhC
Confidence 356667896655 799999999998888889999988763
No 195
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.41 E-value=4.6e-13 Score=106.84 Aligned_cols=109 Identities=14% Similarity=0.131 Sum_probs=81.9
Q ss_pred eecCCCCeeecCcc-CCcEEEEEEecCCCCCchHhHHHHHHHHHHhcc--CCeEEEEeeCCCCCCCCCCCHHHHHHHHHH
Q 030845 17 VKDSKGKDVDLSIY-KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKH--KGLEILAFPCNQFLKQEPGTSQEAHEFACT 93 (170)
Q Consensus 17 l~~~~G~~v~l~~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~--~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~ 93 (170)
+..+++..+...-. .+++++|+|||+||++|+.+.|.+.++.+++++ .++.++.|+++. +...+.+ +
T Consensus 14 V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~---------d~~~~l~-~ 83 (519)
T 3t58_A 14 LTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE---------ETNSAVC-R 83 (519)
T ss_dssp SEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS---------GGGHHHH-H
T ss_pred cEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc---------cccHHHH-H
Confidence 33444444433222 469999999999999999999999999999986 369999998752 1122333 2
Q ss_pred hcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECC---CCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 94 RYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDT---EGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 94 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~---~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
+ ++|..+|+++++++ +|+.+....|..+.+++.+.|.++++.
T Consensus 84 ~----------------------------------~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~ 128 (519)
T 3t58_A 84 E----------------------------------FNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALES 128 (519)
T ss_dssp H----------------------------------TTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTT
T ss_pred H----------------------------------cCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhh
Confidence 2 36777799999998 788888888888899999999988753
No 196
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.41 E-value=8.3e-13 Score=95.75 Aligned_cols=92 Identities=16% Similarity=0.108 Sum_probs=70.1
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhcc--CCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKH--KGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVN 108 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~--~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 108 (170)
.+++++|.||++||++|+.+.|.+.++.+++++ .++.++.|+++. + .....+ .+
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~------~---~~~~l~-~~-------------- 84 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE------E---TNSAVC-RD-------------- 84 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS------T---TTHHHH-HH--------------
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc------h---hhHHHH-HH--------------
Confidence 459999999999999999999999999999986 369999998752 1 112233 22
Q ss_pred CCCCchHHHHHhhhcCCccCcccccCceEEEECCC-----CcEEEecCCCCCchhHHHHHHHHhh
Q 030845 109 GPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTE-----GNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~-----G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|+++++++. |..+ ++.| .+++++.+.|.+++.
T Consensus 85 --------------------~~v~~~Pt~~~~~~g~~~~~g~~~-~~~g-~~~~~l~~~i~~~l~ 127 (244)
T 3q6o_A 85 --------------------FNIPGFPTVRFFXAFTXNGSGAVF-PVAG-ADVQTLRERLIDALE 127 (244)
T ss_dssp --------------------TTCCSSSEEEEECTTCCSSSCEEC-CCTT-CCHHHHHHHHHHHHH
T ss_pred --------------------cCCCccCEEEEEeCCCcCCCCeeE-ecCC-CCHHHHHHHHHHHHH
Confidence 366777999999873 4444 4555 588889999988875
No 197
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.36 E-value=3.6e-12 Score=87.76 Aligned_cols=105 Identities=4% Similarity=-0.040 Sum_probs=65.1
Q ss_pred eeecCccCCcEEEEEEecCCCCCchHhHHH---HHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCc
Q 030845 24 DVDLSIYKGKVLLIVNVASKCGFTDSNYSQ---LTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYP 100 (170)
Q Consensus 24 ~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~---l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (170)
.+..+..+||++||+||++||++|+.+.+. ..++.+.+.+ ++.++.|..|. .++....|. ..
T Consensus 31 a~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de-------~~~l~~~y~-~~------ 95 (173)
T 3ira_A 31 AFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREE-------RPDIDNIYM-TV------ 95 (173)
T ss_dssp HHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTT-------CHHHHHHHH-HH------
T ss_pred HHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcc-------cCcHHHHHH-HH------
Confidence 344455579999999999999999997772 2345555543 47777776542 233323332 10
Q ss_pred eeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecC-----CCCCchhHHHHHHHHh
Q 030845 101 IFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYS-----PTTSPMAIEGDIKNAL 167 (170)
Q Consensus 101 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~-----g~~~~~~~~~~l~~ll 167 (170)
.+.+ +++..+|++++++++|+++.... +....+.+.+.|+++.
T Consensus 96 ---------------~q~~---------~gv~g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~ 143 (173)
T 3ira_A 96 ---------------CQII---------LGRGGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIK 143 (173)
T ss_dssp ---------------HHHH---------HSCCCSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHH
T ss_pred ---------------HHHH---------cCCCCCcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHH
Confidence 0111 26777899999999999998732 1223344555555543
No 198
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.35 E-value=1.1e-11 Score=89.89 Aligned_cols=89 Identities=10% Similarity=0.064 Sum_probs=67.8
Q ss_pred ccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhc---cCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEe
Q 030845 29 IYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYK---HKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKV 105 (170)
Q Consensus 29 ~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 105 (170)
++.++++++.||++|||+|+.+.|.+.++..+++ +.++.+..|..+. .. ..+ ++
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~-------~~----~~~-~~----------- 191 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYE-------NP----DIA-DK----------- 191 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTT-------CH----HHH-HH-----------
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECcc-------CH----HHH-HH-----------
Confidence 3568899999999999999999999999999984 2468888887542 11 122 12
Q ss_pred ecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 106 RVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|++++ +|+++ +.|..+.+++.+.|++.+.
T Consensus 192 -----------------------~~V~~vPt~~i---~G~~~--~~G~~~~~~l~~~l~~~~~ 226 (243)
T 2hls_A 192 -----------------------YGVMSVPSIAI---NGYLV--FVGVPYEEDFLDYVKSAAE 226 (243)
T ss_dssp -----------------------TTCCSSSEEEE---TTEEE--EESCCCHHHHHHHHHHHHT
T ss_pred -----------------------cCCeeeCeEEE---CCEEE--EeCCCCHHHHHHHHHHHhh
Confidence 35666788777 78875 6777788899999988764
No 199
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.34 E-value=6.6e-13 Score=85.36 Aligned_cols=94 Identities=10% Similarity=0.102 Sum_probs=64.1
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhcc-CCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKH-KGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNG 109 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (170)
+...+||+||++||++|+.+-+.+...++.... ..+.++-|.++. +.. .....
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~------~~~--------~~la~------------ 70 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRD------PLP--------PGLEL------------ 70 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTS------CCC--------TTCBC------------
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCC------CCc--------hhHHH------------
Confidence 446899999999999998877654443332110 125666666542 000 00000
Q ss_pred CCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 110 PNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
.++|..+||+++++ +|+.+.|..|..+++.+.+.|++++.+
T Consensus 71 ------------------~~~V~g~PT~i~f~-~G~ev~Ri~G~~~~~~f~~~L~~~l~~ 111 (116)
T 3dml_A 71 ------------------ARPVTFTPTFVLMA-GDVESGRLEGYPGEDFFWPMLARLIGQ 111 (116)
T ss_dssp ------------------SSCCCSSSEEEEEE-TTEEEEEEECCCCHHHHHHHHHHHHHH
T ss_pred ------------------HCCCCCCCEEEEEE-CCEEEeeecCCCCHHHHHHHHHHHHhh
Confidence 04677789999998 999999999999999999999988753
No 200
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.33 E-value=2.7e-12 Score=81.62 Aligned_cols=86 Identities=8% Similarity=0.268 Sum_probs=63.7
Q ss_pred CcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCCC
Q 030845 32 GKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPN 111 (170)
Q Consensus 32 gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (170)
+++++|+|+++|||+|....+.++++.++ .++.++-|.+| ....+-+.+.++
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~---~~v~~~~vdVd--------e~r~~Sn~IA~~----------------- 75 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE---RDMDGYYLIVQ--------QERDLSDYIAKK----------------- 75 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGG--------GGHHHHHHHHHH-----------------
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc---CCceEEEEEee--------cCchhhHHHHHH-----------------
Confidence 78999999999999999999999999884 34888888665 234443334333
Q ss_pred CchHHHHHhhhcCCccCccccc-CceEEEECCCCcEEEec-CCCCCchhHHHHH
Q 030845 112 AEPLYKFLKASKTGYFGSRIKW-NFTKFLVDTEGNVIGRY-SPTTSPMAIEGDI 163 (170)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~v~~-~p~~~lid~~G~i~~~~-~g~~~~~~~~~~l 163 (170)
++|+| +|+++++ ++|+++++. .+..+.+.+.+.|
T Consensus 76 -----------------~~V~h~sPq~il~-k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 76 -----------------TNVKHESPQAFYF-VNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp -----------------HTCCCCSSEEEEE-ETTEEEEEEEGGGCSHHHHHHHT
T ss_pred -----------------hCCccCCCeEEEE-ECCEEEEEeeccccCHHHHHHhh
Confidence 26775 7887777 999999984 4566666665543
No 201
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.32 E-value=4e-12 Score=94.93 Aligned_cols=92 Identities=12% Similarity=0.113 Sum_probs=70.8
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.++++||.||++||++|+.+.|.+.++.+++++. +.++.|++|. +. ....+ .+
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~------~~---~~~l~-~~---------------- 86 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDL------NK---NKALC-AK---------------- 86 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTS------TT---THHHH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccC------cc---CHHHH-Hh----------------
Confidence 4789999999999999999999999999999875 8999998863 11 12333 22
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCC----------------cEEEecCCCCCchhHHHHHHHHh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEG----------------NVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G----------------~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
++|..+|++++++..+ .....+.|..+.+.+.+.+.+.+
T Consensus 87 ------------------~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~ 141 (298)
T 3ed3_A 87 ------------------YDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI 141 (298)
T ss_dssp ------------------TTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTC
T ss_pred ------------------CCCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhc
Confidence 3566678888887643 24667888888888998887765
No 202
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.32 E-value=4.1e-12 Score=100.48 Aligned_cols=105 Identities=13% Similarity=0.130 Sum_probs=78.5
Q ss_pred eecCCCCeeecCcc-CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccC-CeEEEEeeCCCCCCCCCCCHHHHHHHHHHh
Q 030845 17 VKDSKGKDVDLSIY-KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHK-GLEILAFPCNQFLKQEPGTSQEAHEFACTR 94 (170)
Q Consensus 17 l~~~~G~~v~l~~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~ 94 (170)
+...+|+.+...-. .+|++||+||++||++|+.+.|.+.++.+++++. ++.++.|..+. .
T Consensus 354 v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~-------~----------- 415 (481)
T 3f8u_A 354 VKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA-------N----------- 415 (481)
T ss_dssp SEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS-------S-----------
T ss_pred eEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc-------h-----------
Confidence 33445555433223 4899999999999999999999999999999875 68888887542 0
Q ss_pred cCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcE-EEecCCCCCchhHHHHHHHHhh
Q 030845 95 YKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNV-IGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 95 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i-~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
.+. . .+++..+|+++++++.|++ +.++.|..+.+++.+.|++.+.
T Consensus 416 -~~~--------------~--------------~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~ 461 (481)
T 3f8u_A 416 -DVP--------------S--------------PYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREAT 461 (481)
T ss_dssp -CCC--------------T--------------TCCCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCS
T ss_pred -hhH--------------h--------------hCCCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcC
Confidence 000 0 0367778999999988875 6678888888999999987653
No 203
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.31 E-value=5e-12 Score=81.84 Aligned_cols=71 Identities=13% Similarity=0.058 Sum_probs=56.5
Q ss_pred CcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCCC
Q 030845 32 GKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPN 111 (170)
Q Consensus 32 gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (170)
+++++|+||++||++|+.+.|.|.++.+++++ +.++-|.+|. . + ++
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d~-----------~---~-~~----------------- 68 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVNS-----------C---I-QH----------------- 68 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGGG-----------T---S-TT-----------------
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhHH-----------h---H-HH-----------------
Confidence 45999999999999999999999999999964 8999887541 0 1 11
Q ss_pred CchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCC
Q 030845 112 AEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTT 154 (170)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~ 154 (170)
++|..+|+++++ ++|+.+.+..|..
T Consensus 69 -----------------~~v~~~PT~~~f-k~G~~v~~~~G~~ 93 (118)
T 3evi_A 69 -----------------YHDNCLPTIFVY-KNGQIEAKFIGII 93 (118)
T ss_dssp -----------------CCGGGCSEEEEE-ETTEEEEEEESTT
T ss_pred -----------------CCCCCCCEEEEE-ECCEEEEEEeChh
Confidence 367778886555 8999999987743
No 204
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.30 E-value=6e-12 Score=91.28 Aligned_cols=73 Identities=12% Similarity=0.078 Sum_probs=57.3
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
+++++||+||++||++|+.+.|.|.++.++|++ +.++.|.++ . ...+ .+
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d-----------~-~~l~-~~---------------- 180 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKAS-----------N-TGAG-DR---------------- 180 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHH-----------H-HCCT-TS----------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCC-----------c-HHHH-HH----------------
Confidence 479999999999999999999999999999974 889988532 1 1111 00
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCC
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPT 153 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~ 153 (170)
++|..+|+++++ ++|+++.++.|.
T Consensus 181 ------------------~~I~~~PTll~~-~~G~~v~~~vG~ 204 (245)
T 1a0r_P 181 ------------------FSSDVLPTLLVY-KGGELLSNFISV 204 (245)
T ss_dssp ------------------SCTTTCSEEEEE-ETTEEEEEETTG
T ss_pred ------------------CCCCCCCEEEEE-ECCEEEEEEeCC
Confidence 367778997777 599999998875
No 205
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.29 E-value=8.1e-12 Score=81.27 Aligned_cols=45 Identities=11% Similarity=0.068 Sum_probs=40.2
Q ss_pred ccCCcEEEEEEecC-------CCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 29 IYKGKVLLIVNVAS-------KCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 29 ~~~gk~~ll~f~~~-------~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
+..+++++|.||++ ||++|..+.|.|.++.+++++ ++.++.|.++
T Consensus 21 ~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~ 72 (123)
T 1wou_A 21 QHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVG 72 (123)
T ss_dssp TTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECC
T ss_pred HhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECC
Confidence 33589999999999 999999999999999999875 5999999875
No 206
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.29 E-value=7.6e-12 Score=96.38 Aligned_cols=104 Identities=20% Similarity=0.248 Sum_probs=76.0
Q ss_pred ecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhcc-----CCeEEEEeeCCCCCCCCCCCHHHHHHHHH
Q 030845 18 KDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKH-----KGLEILAFPCNQFLKQEPGTSQEAHEFAC 92 (170)
Q Consensus 18 ~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~-----~~v~vi~vs~d~~~~~~~~~~~~~~~~~~ 92 (170)
..++++.+...--.++++||.||++||++|+.+.|.+.++.+++++ .++.++.|.++. . ...+
T Consensus 8 ~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~-------~----~~l~- 75 (382)
T 2r2j_A 8 TSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQ-------H----SDIA- 75 (382)
T ss_dssp CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTT-------C----HHHH-
T ss_pred EECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCc-------c----HHHH-
Confidence 3444444432112578999999999999999999999999999963 248899998752 1 2233
Q ss_pred HhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEe-cCCCCCchhHHHHHHHHhh
Q 030845 93 TRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGR-YSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 93 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~-~~g~~~~~~~~~~l~~ll~ 168 (170)
.+ ++|..+|+++++ ++|+++.+ +.|..+.+.+.+.+.+.+.
T Consensus 76 ~~----------------------------------~~v~~~Pt~~~f-~~G~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (382)
T 2r2j_A 76 QR----------------------------------YRISKYPTLKLF-RNGMMMKREYRGQRSVKALADYIRQQKS 117 (382)
T ss_dssp HH----------------------------------TTCCEESEEEEE-ETTEEEEEECCSCCSHHHHHHHHHHHHS
T ss_pred Hh----------------------------------cCCCcCCEEEEE-eCCcEeeeeecCcchHHHHHHHHHHhcc
Confidence 23 256667887766 68888874 8898889999999988764
No 207
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.28 E-value=7.8e-12 Score=89.27 Aligned_cols=85 Identities=13% Similarity=0.091 Sum_probs=63.3
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
+|+++||+||++||++|..+.|.|.++.++++ ++.++.|.+ + ....+ .+
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~-----------~-~~~l~-~~---------------- 167 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRA-----------S-NTGAG-DR---------------- 167 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEH-----------H-HHTCS-TT----------------
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEEC-----------C-cHHHH-HH----------------
Confidence 45899999999999999999999999999985 488888852 1 00010 00
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCc-------hhHHHHHHH
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSP-------MAIEGDIKN 165 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~-------~~~~~~l~~ 165 (170)
+++..+|+++++ ++|+++.++.|..+. +++.+.|.+
T Consensus 168 ------------------~~i~~~PTl~~~-~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~ 210 (217)
T 2trc_P 168 ------------------FSSDVLPTLLVY-KGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp ------------------SCGGGCSEEEEE-ETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred ------------------CCCCCCCEEEEE-ECCEEEEEEeCCcccCcccCCHHHHHHHHHH
Confidence 367778998888 599999998886543 555555543
No 208
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.27 E-value=1.5e-11 Score=88.43 Aligned_cols=90 Identities=12% Similarity=0.182 Sum_probs=70.2
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccC--CeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHK--GLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVN 108 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 108 (170)
.+++++|.||++||++|+.+.|.+.++.++++++ ++.++.|.++. .. ..+ ++
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~-------~~----~l~-~~-------------- 199 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA-------ET----DLA-KR-------------- 199 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT-------CH----HHH-HH--------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC-------CH----HHH-HH--------------
Confidence 5689999999999999999999999999999765 38888887652 11 222 22
Q ss_pred CCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 109 GPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|++++++ +|+.+. +.|..+.+++.+.|.+.+.
T Consensus 200 --------------------~~v~~~Pt~~~~~-~g~~~~-~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 200 --------------------FDVSGYPTLKIFR-KGRPYD-YNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp --------------------TTCCSSSEEEEEE-TTEEEE-CCSCCSHHHHHHHHHHHTT
T ss_pred --------------------cCCcccCEEEEEE-CCeEEE-ecCCCCHHHHHHHHHhhhC
Confidence 3566678877775 577776 8888888999999987764
No 209
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.27 E-value=3e-11 Score=91.97 Aligned_cols=88 Identities=10% Similarity=0.090 Sum_probs=69.0
Q ss_pred CCcEEEEEEecCCCCCchHhHHH-------HHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeE
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQ-------LTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQ 103 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~-------l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (170)
.++++||.|||+||+ |+.+.|. +.++.+++++.++.++.|.++. .. +.+ .+
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~-------~~----~l~-~~--------- 84 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK-------EA----KLA-KK--------- 84 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTT-------TH----HHH-HH---------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCC-------CH----HHH-Hh---------
Confidence 468999999999999 9888888 8888888887679999998763 11 233 22
Q ss_pred EeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 104 KVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 104 d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
++|..+|+++++ ++|+ +.++.|..+.+.+.+.+.+.+
T Consensus 85 -------------------------~~v~~~Pt~~~~-~~g~-~~~~~G~~~~~~l~~~i~~~~ 121 (350)
T 1sji_A 85 -------------------------LGFDEEGSLYVL-KGDR-TIEFDGEFAADVLVEFLLDLI 121 (350)
T ss_dssp -------------------------HTCCSTTEEEEE-ETTE-EEEECSCCCHHHHHHHHHTTS
T ss_pred -------------------------cCCCccceEEEE-ECCc-EEEecCCCCHHHHHHHHHHhc
Confidence 256667898888 7888 457889888888988887765
No 210
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.26 E-value=8.3e-14 Score=88.64 Aligned_cols=40 Identities=10% Similarity=0.032 Sum_probs=34.4
Q ss_pred CeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhc
Q 030845 23 KDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYK 62 (170)
Q Consensus 23 ~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~ 62 (170)
..+++++..+|+++|.||++|||+|+.+.|.|.++.++++
T Consensus 3 ~~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~ 42 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP 42 (106)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC
T ss_pred HhhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 3456777788999999999999999999999999887664
No 211
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.24 E-value=8.6e-11 Score=69.73 Aligned_cols=36 Identities=8% Similarity=0.023 Sum_probs=31.7
Q ss_pred EEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEe
Q 030845 35 LLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAF 71 (170)
Q Consensus 35 ~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~v 71 (170)
..|.||++||++|+.+.+.+.++.++++. ++.++.|
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v 37 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKI 37 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEE
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEe
Confidence 35889999999999999999999999875 4888887
No 212
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.24 E-value=3.4e-11 Score=95.75 Aligned_cols=91 Identities=12% Similarity=0.140 Sum_probs=73.3
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+++++|.||++||++|+.+.|.+.++.+++++.++.++.|.++. . ...+ .+
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~-------~----~~l~-~~---------------- 81 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE-------N----QDLC-ME---------------- 81 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTT-------C----HHHH-HH----------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCC-------C----HHHH-Hh----------------
Confidence 579999999999999999999999999999987779999998763 1 2233 23
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcE--EEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNV--IGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i--~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|+++++. +|+. +.++.|..+.+.+.+.|.+.+.
T Consensus 82 ------------------~~v~~~Pt~~~~~-~g~~~~~~~~~G~~~~~~l~~~l~~~~~ 122 (504)
T 2b5e_A 82 ------------------HNIPGFPSLKIFK-NSDVNNSIDYEGPRTAEAIVQFMIKQSQ 122 (504)
T ss_dssp ------------------TTCCSSSEEEEEE-TTCTTCEEECCSCCSHHHHHHHHHHHTS
T ss_pred ------------------cCCCcCCEEEEEe-CCccccceeecCCCCHHHHHHHHHHhcC
Confidence 3566678888884 5765 7788998889999999987763
No 213
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.22 E-value=9.2e-11 Score=79.18 Aligned_cols=92 Identities=10% Similarity=0.058 Sum_probs=64.3
Q ss_pred CCcEEEEEEecCCCCCchHhHHHH---HHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeec
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQL---TDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRV 107 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (170)
.+|++||+|+++||+.|+.+-... .++.+.+.+ ++.++.+..+ + .+-..+. ++
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~--------~-~~~~~l~-~~------------- 96 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHD--------S-EEGQRYI-QF------------- 96 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESS--------S-HHHHHHH-HH-------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecC--------C-HhHHHHH-HH-------------
Confidence 489999999999999998875433 233333322 4777777654 2 2333444 23
Q ss_pred CCCCCchHHHHHhhhcCCccCcccccCceEEEECCC-CcEEEecCCCCCchhHHHHHHHHhh
Q 030845 108 NGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTE-GNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~-G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
|++...|+++++|++ |+.+.++.| .+++++.+.|+++++
T Consensus 97 ---------------------y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 97 ---------------------YKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFLG 136 (153)
T ss_dssp ---------------------HTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHHH
T ss_pred ---------------------cCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHHH
Confidence 245556899999998 877776666 799999999988875
No 214
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.22 E-value=4.5e-11 Score=94.51 Aligned_cols=90 Identities=14% Similarity=0.231 Sum_probs=72.7
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.++++||.||++||++|+.+.|.+.++.+++++. +.++.|.++. . ...+ .+
T Consensus 20 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~-------~----~~l~-~~---------------- 70 (481)
T 3f8u_A 20 SAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTA-------N----TNTC-NK---------------- 70 (481)
T ss_dssp SSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTT-------C----HHHH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCC-------C----HHHH-Hh----------------
Confidence 3489999999999999999999999999999876 8899998762 1 1223 22
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|+++++ ++|+.+.++.|..+.+.+.+.+.+.+.
T Consensus 71 ------------------~~v~~~Ptl~~~-~~g~~~~~~~G~~~~~~l~~~~~~~~~ 109 (481)
T 3f8u_A 71 ------------------YGVSGYPTLKIF-RDGEEAGAYDGPRTADGIVSHLKKQAG 109 (481)
T ss_dssp ------------------TTCCEESEEEEE-ETTEEEEECCSCSSHHHHHHHHHHHTS
T ss_pred ------------------cCCCCCCEEEEE-eCCceeeeecCccCHHHHHHHHHhhcc
Confidence 356667876666 789888899999899999999988763
No 215
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.21 E-value=6e-11 Score=84.95 Aligned_cols=86 Identities=12% Similarity=0.108 Sum_probs=65.4
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.++++++.||++||++|+.+.+.+.++.++++ ++.++.|.++. .. +.+ ++
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~-------~~----~l~-~~---------------- 184 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDASE-------NQ----DLA-EQ---------------- 184 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGG-------CH----HHH-HH----------------
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCC-------CH----HHH-HH----------------
Confidence 34566889999999999999999999999984 59999987652 11 122 22
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|++++ +|+ +.++.|..+.+++.+.|+++++
T Consensus 185 ------------------~~v~~~Pt~~~---~G~-~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 185 ------------------FQVVGVPKIVI---NKG-VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp ------------------TTCCSSSEEEE---GGG-TEEEESCCCHHHHHHHHHHHHH
T ss_pred ------------------cCCcccCEEEE---CCE-EEEeeCCCCHHHHHHHHHHHhh
Confidence 35666788777 787 4568888888889999988764
No 216
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.20 E-value=3.2e-11 Score=91.99 Aligned_cols=88 Identities=11% Similarity=0.113 Sum_probs=69.2
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccC-CeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHK-GLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNG 109 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (170)
.+|+++|.||++||++|+.+.|.+.++.+++++. ++.++.|..+. .. + .+
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~-------~~------~-~~--------------- 316 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA-------NE------V-EA--------------- 316 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT-------CB------C-SS---------------
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc-------cc------h-hh---------------
Confidence 5799999999999999999999999999999875 57888776542 00 1 11
Q ss_pred CCCchHHHHHhhhcCCccCcccccCceEEEECCC-CcEEEecCCCCCchhHHHHHHHH
Q 030845 110 PNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTE-GNVIGRYSPTTSPMAIEGDIKNA 166 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~-G~i~~~~~g~~~~~~~~~~l~~l 166 (170)
++|...|+++++.++ |+...++.|..+.+++.+.|++-
T Consensus 317 -------------------~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 317 -------------------VKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESG 355 (361)
T ss_dssp -------------------CCCCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTT
T ss_pred -------------------cCCcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHhc
Confidence 367778999999665 67778889988888888877653
No 217
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.18 E-value=7.3e-11 Score=98.39 Aligned_cols=93 Identities=12% Similarity=0.074 Sum_probs=72.8
Q ss_pred cCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEee
Q 030845 27 LSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVR 106 (170)
Q Consensus 27 l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 106 (170)
+.++.|++++|.||++||++|..++|.+.++.+++++. +.++.|+++. .. . .+ +.
T Consensus 450 ~~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~-v~~~~vd~~~-------~~-~---~~-~~------------ 504 (780)
T 3apo_A 450 FPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ-LKVGTLDCTI-------HE-G---LC-NM------------ 504 (780)
T ss_dssp SCTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH-H---HH-HH------------
T ss_pred HHHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEeCCC-------CH-H---HH-HH------------
Confidence 34457899999999999999999999999999999864 9999998752 12 1 22 22
Q ss_pred cCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 107 VNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|+++++ ++|++ .++.|..+.+++.+.+++++.
T Consensus 505 ----------------------~~v~~~Pt~~~~-~~g~~-~~~~g~~~~~~l~~fi~~~~~ 542 (780)
T 3apo_A 505 ----------------------YNIQAYPTTVVF-NQSSI-HEYEGHHSAEQILEFIEDLRN 542 (780)
T ss_dssp ----------------------TTCCSSSEEEEE-ETTEE-EEECSCSCHHHHHHHHHHHHS
T ss_pred ----------------------cCCCcCCeEEEE-cCCce-eeecCcccHHHHHHHHHhhcc
Confidence 255667898998 55776 678888888899999988764
No 218
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.17 E-value=7.5e-11 Score=81.09 Aligned_cols=137 Identities=9% Similarity=0.033 Sum_probs=77.3
Q ss_pred CCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCC--------------------------
Q 030845 22 GKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQ-------------------------- 75 (170)
Q Consensus 22 G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~-------------------------- 75 (170)
+....+.+..++++|+.||..|||+|....+.|.++.+++++..+.+..+++..
T Consensus 12 ~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~l 91 (175)
T 3gyk_A 12 PNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWAL 91 (175)
T ss_dssp TTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHH
T ss_pred CCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHH
Confidence 444567777899999999999999999999999999999876234444443320
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCC
Q 030845 76 FLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTS 155 (170)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~ 155 (170)
+..+...+.+.+.+++ .+.|++...+.. .... ...-..+..........+|..+|+++| +|+ ...|..+
T Consensus 92 f~~~~~~~~~~l~~~a-~~~Gld~~~~~~-~~~~---~~~~~~v~~~~~~a~~~gv~gtPt~~i---~g~---~~~G~~~ 160 (175)
T 3gyk_A 92 MGMSGKANETGVLRIA-REVGLDTEQLQR-DMEA---PEVTAHIAQSMALAQKLGFNGTPSFVV---EDA---LVPGFVE 160 (175)
T ss_dssp HTCSSCCSHHHHHHHH-HHTTCCHHHHHH-HTTC---HHHHHHHHHHHHHHHHHTCCSSSEEEE---TTE---EECSCCC
T ss_pred HhcCCCCCHHHHHHHH-HHcCCCHHHHHH-HHhC---hHHHHHHHHHHHHHHHcCCccCCEEEE---CCE---EeeCCCC
Confidence 0001112344444444 344443221100 0000 000000111100111157888998665 454 4467778
Q ss_pred chhHHHHHHHHhhc
Q 030845 156 PMAIEGDIKNALGD 169 (170)
Q Consensus 156 ~~~~~~~l~~ll~~ 169 (170)
.+.+.+.|++++++
T Consensus 161 ~~~l~~~i~~~l~~ 174 (175)
T 3gyk_A 161 QSQLQDAVDRARKA 174 (175)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 89999999888753
No 219
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.17 E-value=9e-11 Score=92.08 Aligned_cols=44 Identities=14% Similarity=0.125 Sum_probs=39.2
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccC-------CeEEEEeeCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHK-------GLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~-------~v~vi~vs~d 74 (170)
.+|++||+|||+||++|+.+.|.+.++.+++++. .+.++.|++|
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d 91 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA 91 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC
Confidence 4589999999999999999999999999999743 3899999876
No 220
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.14 E-value=7.3e-11 Score=93.86 Aligned_cols=103 Identities=19% Similarity=0.131 Sum_probs=74.2
Q ss_pred eecCCCCeeecCcc-CCcEEEEEEecCCCCCchHhHHHHHHHHHHhc-c-CCeEEEEeeCCCCCCCCCCCHHHHHHHHHH
Q 030845 17 VKDSKGKDVDLSIY-KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYK-H-KGLEILAFPCNQFLKQEPGTSQEAHEFACT 93 (170)
Q Consensus 17 l~~~~G~~v~l~~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~-~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~ 93 (170)
+..++|+.+...-. .+|++||.||++||++|+.+.|.+.++.++++ . .++.++.+..+.
T Consensus 360 v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~------------------ 421 (504)
T 2b5e_A 360 VFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTE------------------ 421 (504)
T ss_dssp EEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGG------------------
T ss_pred ceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCc------------------
Confidence 34445554433222 57999999999999999999999999999997 2 357777775321
Q ss_pred hcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcE--EEecCCCCCchhHHHHHHHHhh
Q 030845 94 RYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNV--IGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 94 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i--~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
.... . ++|..+|+++++ ++|+. +.++.|..+.+++.+.|++.+.
T Consensus 422 -~~~~---------------~--------------~~v~~~Pt~~~~-~~G~~~~~~~~~G~~~~~~l~~~i~~~~~ 467 (504)
T 2b5e_A 422 -NDVR---------------G--------------VVIEGYPTIVLY-PGGKKSESVVYQGSRSLDSLFDFIKENGH 467 (504)
T ss_dssp -CCCS---------------S--------------CCCSSSSEEEEE-CCTTSCCCCBCCSCCCHHHHHHHHHHHCT
T ss_pred -cccc---------------c--------------CCceecCeEEEE-eCCceecceEecCCCCHHHHHHHHHhcCC
Confidence 0000 0 256677998888 78876 6778888888899999987753
No 221
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.12 E-value=4.3e-11 Score=99.77 Aligned_cols=91 Identities=12% Similarity=-0.009 Sum_probs=71.6
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+++++|.||++||++|+.+.|.+.++.+++++ ++.++.|.++. .. ..+ .+
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~-------~~----~~~-~~---------------- 724 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQA-------YP----QTC-QK---------------- 724 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCC-------CH----HHH-Hh----------------
Confidence 478999999999999999999999999999976 49999998652 11 122 22
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCC----CCCchhHHHHHHHHhhc
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSP----TTSPMAIEGDIKNALGD 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g----~~~~~~~~~~l~~ll~~ 169 (170)
++|..+|+++++ ++|+++.++.| ..+.+++.+.|++++++
T Consensus 725 ------------------~~v~~~Pt~~~~-~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 725 ------------------AGIKAYPSVKLY-QYERAKKSIWEEQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp ------------------TTCCSSSEEEEE-EEETTTTEEEEEEECCCCHHHHHHHHHHHTTC
T ss_pred ------------------cCCCcCCEEEEE-cCCCccccccCcccCCcCHHHHHHHHHHHHHH
Confidence 256667898888 88887766655 46888999999988764
No 222
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=99.07 E-value=9.6e-10 Score=76.87 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=39.1
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
.++++|+.||..|||+|....+.|.++.+++++ ++.+..+.++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 579999999999999999999999999999987 5888888775
No 223
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.02 E-value=3.8e-09 Score=80.92 Aligned_cols=90 Identities=16% Similarity=0.099 Sum_probs=66.8
Q ss_pred CCcEEEEEEecCCCCCchHhH------HHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEE
Q 030845 31 KGKVLLIVNVASKCGFTDSNY------SQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQK 104 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~------~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 104 (170)
.++++||.|||+||++|...- |.+.++.+.+++.++.+..|.++. .. ..+ .+
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~-------~~----~l~-~~---------- 86 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEK-------DA----AVA-KK---------- 86 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTT-------TH----HHH-HH----------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcc-------cH----HHH-HH----------
Confidence 468999999999999973322 477888888877679999998762 11 233 23
Q ss_pred eecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 105 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++|..+|+++++. +|+.+ .+.|..+.+.+.+.|.+.+.
T Consensus 87 ------------------------~~V~~~PTl~~f~-~G~~~-~y~G~~~~~~i~~~i~~~~~ 124 (367)
T 3us3_A 87 ------------------------LGLTEEDSIYVFK-EDEVI-EYDGEFSADTLVEFLLDVLE 124 (367)
T ss_dssp ------------------------HTCCSTTEEEEEE-TTEEE-ECCSCCSHHHHHHHHHHHHS
T ss_pred ------------------------cCCCcCceEEEEE-CCcEE-EeCCCCCHHHHHHHHHHhcC
Confidence 2566678878775 68775 78898889999999887653
No 224
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=99.00 E-value=6.7e-10 Score=77.48 Aligned_cols=43 Identities=12% Similarity=0.149 Sum_probs=38.2
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
.++++|+.||..|||+|....+.|.++.+++++ ++.+.-+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEehh
Confidence 689999999999999999999999999999987 5888777654
No 225
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.99 E-value=7.7e-10 Score=78.78 Aligned_cols=45 Identities=16% Similarity=0.263 Sum_probs=35.8
Q ss_pred eecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeC
Q 030845 25 VDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPC 73 (170)
Q Consensus 25 v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~ 73 (170)
+.+....+|++|+.||++|||+|+.+.+.|.++.++ ++.++.+..
T Consensus 79 ~~~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~ 123 (216)
T 1eej_A 79 IVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAF 123 (216)
T ss_dssp EEECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEEC
T ss_pred eeecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEEC
Confidence 344445689999999999999999999999988652 577776654
No 226
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.97 E-value=3e-09 Score=73.31 Aligned_cols=44 Identities=7% Similarity=0.047 Sum_probs=37.3
Q ss_pred CCcEEEEEEec-------CCCCCchHhHHHHHHHHHHhcc----CCeEEEEeeCC
Q 030845 31 KGKVLLIVNVA-------SKCGFTDSNYSQLTDLYNKYKH----KGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~ll~f~~-------~~C~~C~~~~~~l~~~~~~~~~----~~v~vi~vs~d 74 (170)
++.++||.||| .||++|+...|.+.++.+++.. ..+.+.-|.+|
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d 90 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVN 90 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECc
Confidence 46799999999 4999999999999999999961 23888888765
No 227
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.97 E-value=2.4e-10 Score=73.26 Aligned_cols=86 Identities=9% Similarity=0.117 Sum_probs=53.4
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.++++++ ||++|||+|..+.+.|.++..+ +.++.|..+. ........+...
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~~-------~~~~~~~~l~~~---------------- 68 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDELS-------DGSQLQSALAHW---------------- 68 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGST-------THHHHHHHHHHH----------------
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCCC-------ChHHHHHHHHHH----------------
Confidence 4556666 9999999999999998887433 4566665432 222222222122
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCC---CchhHHHHHHHH
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTT---SPMAIEGDIKNA 166 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~---~~~~~~~~l~~l 166 (170)
+++..+|++ ++ +|+++..+.|.. +.+++.+.|+++
T Consensus 69 ------------------~~v~~~Pt~-~~--~g~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 69 ------------------TGRGTVPNV-FI--GGKQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp ------------------HSCCSSCEE-EE--TTEEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred ------------------hCCCCcCEE-EE--CCEEECChHHHHHHHhCChHHHHHHHc
Confidence 245566887 44 688888765543 455677777654
No 228
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.93 E-value=2.1e-09 Score=70.69 Aligned_cols=89 Identities=8% Similarity=0.004 Sum_probs=67.6
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.++++++.||++ |++|....|.|.++.++|+++ +.++-|++|. .. +.+ ++
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~-------~~----~~a-~~---------------- 71 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKA-------FG----AHA-GN---------------- 71 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTT-------TG----GGT-TT----------------
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHH-------hH----HHH-HH----------------
Confidence 457899999999 899999999999999999876 8898887542 11 111 12
Q ss_pred CCchHHHHHhhhcCCccCccccc--CceEEEECC-CCcEEEecC--CCCCchhHHHHHHHHhh
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKW--NFTKFLVDT-EGNVIGRYS--PTTSPMAIEGDIKNALG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~--~p~~~lid~-~G~i~~~~~--g~~~~~~~~~~l~~ll~ 168 (170)
++++. +|++++++. +|+. ++.. |..+.+.+.+.|+++++
T Consensus 72 ------------------~gi~~~~iPtl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l~ 115 (133)
T 2djk_A 72 ------------------LNLKTDKFPAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDDFVA 115 (133)
T ss_dssp ------------------TTCCSSSSSEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHHHHH
T ss_pred ------------------cCCCcccCCEEEEEecCcCcc-cCCCCccccCHHHHHHHHHHHHc
Confidence 24555 689888874 5776 4655 88888999999998875
No 229
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.89 E-value=4.3e-09 Score=73.45 Aligned_cols=43 Identities=12% Similarity=-0.006 Sum_probs=37.8
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
.++++|+.||..|||+|....+.|.++.++++. ++.+..+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEeccc
Confidence 579999999999999999999999999999876 4888777653
No 230
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.87 E-value=5e-09 Score=63.94 Aligned_cols=75 Identities=9% Similarity=0.077 Sum_probs=50.0
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchH
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPL 115 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 115 (170)
|+.||++||++|....+.|.++..++ +.-|++|. +++ .+ +++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~-------~~~----l~-~~~-------------------- 44 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDD-------DAA----LE-SAY-------------------- 44 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTT-------CHH----HH-HHH--------------------
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCC-------CHH----HH-HHh--------------------
Confidence 67799999999999999888764432 34455542 232 22 232
Q ss_pred HHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 116 YKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 116 ~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
++. +|++++ .+|+.+. |..+.+++.+.|++.+.
T Consensus 45 --------------g~~-vPtl~~--~~G~~v~---g~~~~~~L~~~l~~~~~ 77 (87)
T 1ttz_A 45 --------------GLR-VPVLRD--PMGRELD---WPFDAPRLRAWLDAAPH 77 (87)
T ss_dssp --------------TTT-CSEEEC--TTCCEEE---SCCCHHHHHHHHHTCC-
T ss_pred --------------CCC-cCeEEE--ECCEEEe---CCCCHHHHHHHHHHHHH
Confidence 333 577555 7798875 66788888888887654
No 231
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.83 E-value=2.8e-08 Score=70.73 Aligned_cols=92 Identities=20% Similarity=0.232 Sum_probs=63.1
Q ss_pred ccCCcEEEEEEecC-CCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeec
Q 030845 29 IYKGKVLLIVNVAS-KCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRV 107 (170)
Q Consensus 29 ~~~gk~~ll~f~~~-~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (170)
...++++|+.||++ ||++|+...+.+.++.+. . .++.++.|.++ ..+ ..+.+ .+
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~-~~v~~~~vd~~--------~~~-~~~~~-~~------------- 73 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-T-DKLSYEIVDFD--------TPE-GKELA-KR------------- 73 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-C-TTEEEEEEETT--------SHH-HHHHH-HH-------------
T ss_pred hcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-C-CceEEEEEeCC--------Ccc-cHHHH-HH-------------
Confidence 34567889999999 999999999999998765 3 24889888764 211 23344 23
Q ss_pred CCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEE-EecCCCCCchhHHHHHHHHh
Q 030845 108 NGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVI-GRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~-~~~~g~~~~~~~~~~l~~ll 167 (170)
++|..+|+++++ ++|+.. .++.|....+++.+.+..++
T Consensus 74 ---------------------~~v~~~Pt~~~~-~~g~~~~~~~~G~~~~~~l~~~l~~~l 112 (226)
T 1a8l_A 74 ---------------------YRIDRAPATTIT-QDGKDFGVRYFGLPAGHEFAAFLEDIV 112 (226)
T ss_dssp ---------------------TTCCSSSEEEEE-ETTBCCSEEEESCCCTTHHHHHHHHHH
T ss_pred ---------------------cCCCcCceEEEE-cCCceeeEEEeccCcHHHHHHHHHHHH
Confidence 255566887777 455432 55666666777777776654
No 232
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.70 E-value=9.2e-08 Score=68.21 Aligned_cols=90 Identities=9% Similarity=0.052 Sum_probs=63.0
Q ss_pred CCcEEEEEE----ecCCCCCchHhHHHHHHHHHHhcc-CCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEe
Q 030845 31 KGKVLLIVN----VASKCGFTDSNYSQLTDLYNKYKH-KGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKV 105 (170)
Q Consensus 31 ~gk~~ll~f----~~~~C~~C~~~~~~l~~~~~~~~~-~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 105 (170)
.+.++|+.| |++||++|...++.+.++.+++.+ ..+.+..|.++. ..+.+ .+
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~-----------~~~l~-~~----------- 76 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFT-----------HKEET-EK----------- 76 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTT-----------CHHHH-HH-----------
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcc-----------cHHHH-HH-----------
Confidence 445555655 478899999999999999888843 348888886542 12233 23
Q ss_pred ecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 106 RVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
++|..+|++.++. +|....++.|..+.+++...+..++
T Consensus 77 -----------------------~~v~~~Ptl~~~~-~~~~~~~~~G~~~~~~l~~~~~~~~ 114 (229)
T 2ywm_A 77 -----------------------YGVDRVPTIVIEG-DKDYGIRYIGLPAGLEFTTLINGIF 114 (229)
T ss_dssp -----------------------TTCCBSSEEEEES-SSCCCEEEESCCCTTHHHHHHHHHH
T ss_pred -----------------------cCCCcCcEEEEEC-CCcccceecCCccHHHHHHHHHHHH
Confidence 3566778888885 5666677778777788888777654
No 233
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.70 E-value=5.2e-08 Score=70.45 Aligned_cols=136 Identities=11% Similarity=0.095 Sum_probs=71.1
Q ss_pred eecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHH--------HhcC
Q 030845 25 VDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFAC--------TRYK 96 (170)
Q Consensus 25 v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~--------~~~~ 96 (170)
+.+..-.++++|+.|+..|||+|.+..+.+.++.++ .++.++.+.+... .+++....+..+. +.+.
T Consensus 90 i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~~p~~---~~~s~~~a~a~~~a~d~~~~~~~~~ 163 (241)
T 1v58_A 90 LLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS---GKVQLRTLLVGVI---KPESPATAAAILASKDPAKTWQQYE 163 (241)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT---TSEEEEEEECCCS---STTHHHHHHHHHHSSSHHHHHHHHH
T ss_pred ceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC---CcEEEEEEECCcC---CCcHHHHHHHHHHccCHHHHHHHHH
Confidence 444445678999999999999999999999988775 2476666554211 1122222111110 0111
Q ss_pred CCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 97 AEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 97 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
..|..- ..+.........-..+.........++|..+|++++.+.+|++ .+..|..+++++.+.|+++++
T Consensus 164 ~~~~~~-~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~-~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 164 ASGGKL-KLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL-QQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp HTTTCC-CCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE-EEEESSCCHHHHHHHTTC---
T ss_pred HHhccC-CCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE-EEecCCCCHHHHHHHHHHHHH
Confidence 111100 0000000000110011111000111578999999999888975 456777788888888776553
No 234
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.68 E-value=5.9e-08 Score=67.45 Aligned_cols=42 Identities=14% Similarity=0.194 Sum_probs=36.8
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPC 73 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~ 73 (170)
.++++|+.||..+||+|....+.+.++.++++. ++.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 678999999999999999999999999999875 477776665
No 235
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.64 E-value=2.6e-07 Score=73.86 Aligned_cols=83 Identities=11% Similarity=0.063 Sum_probs=60.8
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGP 110 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (170)
.+++.+..||++|||+|+...|.|+++..+++ ++.+.-|..+. .. +.+ ++
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~-------~~----~~~-~~---------------- 165 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGT-------FQ----NEI-TE---------------- 165 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechh-------hH----HHH-HH----------------
Confidence 46788999999999999999999999988876 48888886542 12 222 22
Q ss_pred CCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHH
Q 030845 111 NAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNA 166 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~l 166 (170)
+++..+|++++ +|+.+.+ |..+.+++.+.|++.
T Consensus 166 ------------------~~i~svPt~~i---~g~~~~~--G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 166 ------------------RNVMGVPAVFV---NGKEFGQ--GRMTLTEIVAKVDTG 198 (521)
T ss_dssp ------------------TTCCSSSEEEE---TTEEEEE--SCCCHHHHHHHHCCS
T ss_pred ------------------hCCCccCEEEE---CCEEEec--CCCCHHHHHHHHhhc
Confidence 25566688766 8888765 667777777776543
No 236
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.60 E-value=1e-07 Score=66.53 Aligned_cols=43 Identities=14% Similarity=0.101 Sum_probs=38.7
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
.++++|+.||..|||+|....+.+.++.+++++ ++.+.-+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 479999999999999999999999999999987 4888888765
No 237
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.59 E-value=2e-07 Score=65.98 Aligned_cols=39 Identities=15% Similarity=0.256 Sum_probs=31.2
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPC 73 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~ 73 (170)
.++++|+.||..|||+|....+.|.++.+. ++.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~ 123 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAF 123 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEEC
Confidence 568999999999999999999999986542 466665543
No 238
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.57 E-value=5.2e-08 Score=60.88 Aligned_cols=48 Identities=15% Similarity=0.179 Sum_probs=33.1
Q ss_pred CCeeecCcc-CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 22 GKDVDLSIY-KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 22 G~~v~l~~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
|..-.|... ..++.|+.|+++|||+|....+.|.++. .++.+.-|.++
T Consensus 4 ~~~~~l~~~~~~~~~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~ 52 (100)
T 1wjk_A 4 GSSGNLSASNRALPVLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDIT 52 (100)
T ss_dssp CCCCCCCCSCCCCCEEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETT
T ss_pred CcchhhhhccCCCCEEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECC
Confidence 333344333 3467788899999999998888877653 23777777765
No 239
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.53 E-value=5.1e-07 Score=57.00 Aligned_cols=38 Identities=18% Similarity=0.193 Sum_probs=31.6
Q ss_pred EEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 34 VLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 34 ~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
..|+.||++||++|....+.|.++.++++ +.+.-|.+|
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~---i~~~~vDId 67 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW---FELEVINID 67 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC---CCCEEEETT
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC---CeEEEEECC
Confidence 56888999999999999999999988863 666666655
No 240
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=98.52 E-value=9.2e-07 Score=61.53 Aligned_cols=111 Identities=12% Similarity=0.046 Sum_probs=71.3
Q ss_pred eeecCcc--CCcEEEEEEe-cCCCCCchH-hHHHHHHHHHHh-ccCCe-EEEEeeCCCCCCCCCCCHHHHHHHHHHhcCC
Q 030845 24 DVDLSIY--KGKVLLIVNV-ASKCGFTDS-NYSQLTDLYNKY-KHKGL-EILAFPCNQFLKQEPGTSQEAHEFACTRYKA 97 (170)
Q Consensus 24 ~v~l~~~--~gk~~ll~f~-~~~C~~C~~-~~~~l~~~~~~~-~~~~v-~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~ 97 (170)
++++++. +||.+||++. +.+.|.|.. ++|.+.+.++++ +.+|+ +|+.||+| +.-.++.|.+ ..+.
T Consensus 59 ~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~kGvd~I~ciSVN--------D~FVm~AW~k-~~~~ 129 (199)
T 4h86_A 59 TVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKEVDQVIVVTVD--------NPFANQAWAK-SLGV 129 (199)
T ss_dssp EEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHSCCCEEEEEESS--------CHHHHHHHHH-HTTC
T ss_pred eeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhcCCcEEEEEEcC--------CHHHHHHHHH-Hhcc
Confidence 3666664 6887777654 889999986 799999998876 66777 78999987 6888899984 5444
Q ss_pred ----CCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEecC
Q 030845 98 ----EYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYS 151 (170)
Q Consensus 98 ----~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~~ 151 (170)
.+++++| ..+.. -+.+........+ +.+.....+||| ||+|.+.+.
T Consensus 130 ~~~~~i~~laD--~~~ef----tkalGl~~~~~~g-g~RS~Rya~IVd-DGvV~~~~v 179 (199)
T 4h86_A 130 KDTTHIKFASD--PGCAF----TKSIGFELAVGDG-VYWSGRWAMVVE-NGIVTYAAK 179 (199)
T ss_dssp CCCSSEEEEEC--GGGHH----HHHTTCEEEEETT-EEEECSEEEEEE-TTEEEEEEE
T ss_pred cccccccccCC--cchHH----HHhcCceeecCCC-cceeeEEEEEEE-CCEEEEEEE
Confidence 3556654 32221 1222211111111 223334568888 999988763
No 241
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.50 E-value=3.7e-07 Score=65.91 Aligned_cols=90 Identities=13% Similarity=0.127 Sum_probs=62.5
Q ss_pred CCcEEEEEEec--CCCCCchHhHHHHHHHHHHhcc-CCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeec
Q 030845 31 KGKVLLIVNVA--SKCGFTDSNYSQLTDLYNKYKH-KGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRV 107 (170)
Q Consensus 31 ~gk~~ll~f~~--~~C~~C~~~~~~l~~~~~~~~~-~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (170)
.++++||.||+ +||+ ..|.+.++.+++++ .++.++.|.+|..+ .......+ .+
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g------~~~~~~l~-~~------------- 76 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYG------DKLNMELS-EK------------- 76 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSS------SCCSHHHH-HH-------------
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCccc------chhhHHHH-HH-------------
Confidence 46899999999 9998 88999999999974 36899999754100 01112333 23
Q ss_pred CCCCCchHHHHHhhhcCCccCcccc--cCceEEEECCCCc--EEEecCCCCCchhHHHHHHHH
Q 030845 108 NGPNAEPLYKFLKASKTGYFGSRIK--WNFTKFLVDTEGN--VIGRYSPTTSPMAIEGDIKNA 166 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~v~--~~p~~~lid~~G~--i~~~~~g~~~~~~~~~~l~~l 166 (170)
++|. .+|+++++ ++|+ ...++.|..+.+.+.+.|.+.
T Consensus 77 ---------------------~~V~~~~~PTl~~f-~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 77 ---------------------YKLDKESYPVFYLF-RDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp ---------------------TTCCGGGCSEEEEE-ETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred ---------------------cCCCCCCCCEEEEE-eCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 2455 56787777 5565 355778877888888888765
No 242
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.50 E-value=1.9e-07 Score=55.70 Aligned_cols=36 Identities=6% Similarity=-0.001 Sum_probs=26.6
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
++.||++|||+|+...+.|.++.+++ ++.+..+.+|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~ 39 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS---KYTVEIVHLG 39 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT---TEEEEEEETT
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc---CCeEEEEEec
Confidence 56689999999999999999887654 3444444443
No 243
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.48 E-value=2.1e-07 Score=55.89 Aligned_cols=37 Identities=11% Similarity=0.091 Sum_probs=30.7
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
++.|+++|||+|....+.|.++.++++ ++.+..++++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--~i~~~~vdi~ 39 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--DFQYQYVDIR 39 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--SCEEEEECHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--CceEEEEecc
Confidence 567999999999999999999988765 4788777543
No 244
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.45 E-value=3.6e-06 Score=57.45 Aligned_cols=49 Identities=10% Similarity=0.199 Sum_probs=40.0
Q ss_pred eecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHh--ccCCeEEEEeeCC
Q 030845 25 VDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKY--KHKGLEILAFPCN 74 (170)
Q Consensus 25 v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~--~~~~v~vi~vs~d 74 (170)
+.+....++++|+.|+..+||+|....+.+.++.+++ .+ ++.++.....
T Consensus 20 ~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 70 (175)
T 1z6m_A 20 LHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLFD 70 (175)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEECC
T ss_pred cccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeCC
Confidence 4566667899999999999999999999999999988 33 3777776554
No 245
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.44 E-value=1.5e-06 Score=63.05 Aligned_cols=90 Identities=11% Similarity=0.065 Sum_probs=63.4
Q ss_pred CCcEEEEEEe--cCCCCCchHhHHHHHHHHHHhcc--CCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEee
Q 030845 31 KGKVLLIVNV--ASKCGFTDSNYSQLTDLYNKYKH--KGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVR 106 (170)
Q Consensus 31 ~gk~~ll~f~--~~~C~~C~~~~~~l~~~~~~~~~--~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 106 (170)
.++++||.|| |+||+ +.|.+.++.++++. .++.+..|.++..+ .+.....+ .+
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g------~~~n~~la-~~------------ 88 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYG------ELENKALG-DR------------ 88 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSST------TCTTHHHH-HH------------
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCccc------ccccHHHH-HH------------
Confidence 4689999999 99998 89999999999864 35899999876200 00112333 23
Q ss_pred cCCCCCchHHHHHhhhcCCccCcccc--cCceEEEECCCCcE--EEec--CCCCCchhHHHHHHHHh
Q 030845 107 VNGPNAEPLYKFLKASKTGYFGSRIK--WNFTKFLVDTEGNV--IGRY--SPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~v~--~~p~~~lid~~G~i--~~~~--~g~~~~~~~~~~l~~ll 167 (170)
++|. .+||++++- |+. ...+ .|..+.+.+.+.|.+.+
T Consensus 89 ----------------------~~V~~~~~PTl~~F~--G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 89 ----------------------YKVDDKNFPSIFLFK--GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp ----------------------TTCCTTSCCEEEEES--SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred ----------------------hCCCcCCCCeEEEEe--CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 2555 668877775 763 4556 78888888888888764
No 246
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.26 E-value=1.2e-06 Score=60.95 Aligned_cols=43 Identities=5% Similarity=0.061 Sum_probs=35.4
Q ss_pred CCcEEEEEEecCCCCCchHhHHHH---HHHHHHhccCCeEEEEeeCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQL---TDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~vi~vs~d 74 (170)
.++++|+.||..|||+|....+.+ .++.+++.+ ++.++.+.++
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 458999999999999999999987 578887775 4777777665
No 247
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.22 E-value=7.1e-06 Score=62.28 Aligned_cols=91 Identities=12% Similarity=0.093 Sum_probs=63.2
Q ss_pred cEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCCCC
Q 030845 33 KVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNA 112 (170)
Q Consensus 33 k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (170)
++++|.|++.||++|....+.+.++.++++++ +.++.|.++. ++....+ +.++
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~---------~~~~~~~-~~fg---------------- 188 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDH---------TDNQRIL-EFFG---------------- 188 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTS---------GGGHHHH-HHTT----------------
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCCh---------HHHHHHH-HHcC----------------
Confidence 57788999999999999999999999999876 8888886541 1122333 2333
Q ss_pred chHHHHHhhhcCCccCccccc--CceEEEECCCCc-EEEec-CCCCCchhHHHHHHHHhh
Q 030845 113 EPLYKFLKASKTGYFGSRIKW--NFTKFLVDTEGN-VIGRY-SPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~v~~--~p~~~lid~~G~-i~~~~-~g~~~~~~~~~~l~~ll~ 168 (170)
+.. .|++.+++..+. ..+.. .+..+.+.+.+.++..++
T Consensus 189 ------------------i~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~ 230 (361)
T 3uem_A 189 ------------------LKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLE 230 (361)
T ss_dssp ------------------CCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHT
T ss_pred ------------------CCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhc
Confidence 322 477777776443 23332 256788889999988764
No 248
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.22 E-value=3.2e-07 Score=67.95 Aligned_cols=37 Identities=11% Similarity=0.062 Sum_probs=28.5
Q ss_pred eecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHh
Q 030845 25 VDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKY 61 (170)
Q Consensus 25 v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~ 61 (170)
+.+++.-++..++.||++|||+|+.+.|.++++.+++
T Consensus 190 ~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 190 VGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 3444444445578999999999999999999987655
No 249
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.19 E-value=1.7e-06 Score=51.37 Aligned_cols=32 Identities=6% Similarity=0.242 Sum_probs=24.2
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
++.|+++|||+|....+.|.+. ++.+..+.++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-------~i~~~~vdi~ 34 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-------GFDFEMINVD 34 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEcCCCChhHHHHHHHHHHC-------CCCeEEEECC
Confidence 5669999999999888877652 4666666665
No 250
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.18 E-value=7.7e-06 Score=59.03 Aligned_cols=43 Identities=12% Similarity=0.145 Sum_probs=34.1
Q ss_pred CcEEEEEEecCC--CCCchHhHHHHHHHHHHhcc-CC---eEEEEeeCC
Q 030845 32 GKVLLIVNVASK--CGFTDSNYSQLTDLYNKYKH-KG---LEILAFPCN 74 (170)
Q Consensus 32 gk~~ll~f~~~~--C~~C~~~~~~l~~~~~~~~~-~~---v~vi~vs~d 74 (170)
+++++|.||+.| |++|....+.+.++.+.+.. +| +.++.+..|
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d 73 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRE 73 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETT
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCC
Confidence 478899999999 99999999999999887532 22 777777544
No 251
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.17 E-value=2.9e-06 Score=58.09 Aligned_cols=42 Identities=5% Similarity=-0.001 Sum_probs=34.7
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPC 73 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~ 73 (170)
.++++|+.|+.-.||+|....+.+.++.+++.+. +.++-+..
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~-~~~~~~~~ 61 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG-AKFQKNHV 61 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-CEEEEEEC
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc-eEEEEEec
Confidence 4689999999999999999999999999999865 55554443
No 252
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.17 E-value=9.2e-07 Score=61.29 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=34.1
Q ss_pred CcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 32 GKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 32 gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
++++||.||..|||+|....|.+.++.+++ ++.+.-+.+.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA---GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH---TSCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh---CCeEEEEecc
Confidence 689999999999999999999999999998 3666555543
No 253
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=98.06 E-value=8.6e-06 Score=56.34 Aligned_cols=44 Identities=16% Similarity=0.174 Sum_probs=36.5
Q ss_pred CCcEEEEEEecCCCCCchHhHHHH-HHHHHHhccCCeEEEEeeCCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQL-TDLYNKYKHKGLEILAFPCNQ 75 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l-~~~~~~~~~~~v~vi~vs~d~ 75 (170)
.+++++|.||...||+|....+.+ .++.+++... +.+..+.++.
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~-v~~~~~~l~~ 60 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDI-VAFTPFHLET 60 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT-CEEEEEECTT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCc-eEEEEEecCc
Confidence 467888899999999999999999 9999888754 7777776654
No 254
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.03 E-value=1.4e-05 Score=46.40 Aligned_cols=32 Identities=13% Similarity=0.168 Sum_probs=23.8
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
++.|+++|||+|....+.|.++ ++.+..+.++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~ 34 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDIS 34 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECC
Confidence 4568999999999988887754 4656666554
No 255
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.03 E-value=8.9e-06 Score=54.26 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=26.0
Q ss_pred eecCccCCcEEEEEEecCCCCCchHhHHHHHHH
Q 030845 25 VDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDL 57 (170)
Q Consensus 25 v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~ 57 (170)
+.+..-.++++|+.|+-.+||+|.+..+.+.++
T Consensus 7 i~~~~~~a~~~vv~f~D~~Cp~C~~~~~~l~~l 39 (147)
T 3gv1_A 7 IKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEKM 39 (147)
T ss_dssp EEEEETTCCEEEEEEECTTCHHHHHHHHHHTTC
T ss_pred eeeecCCCCEEEEEEECCCChhHHHHHHHHhhc
Confidence 334344678999999999999999998887653
No 256
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.97 E-value=1.2e-06 Score=61.32 Aligned_cols=53 Identities=17% Similarity=0.226 Sum_probs=41.9
Q ss_pred CCCee-ecCc-cCCcEEEEEEecCCCCCchHhHHHH---HHHHHHhccCCeEEEEeeCC
Q 030845 21 KGKDV-DLSI-YKGKVLLIVNVASKCGFTDSNYSQL---TDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 21 ~G~~v-~l~~-~~gk~~ll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~vi~vs~d 74 (170)
.|+.+ .+.. ..++++||.||+.|||+|....|.+ .++.+++++ ++.+.-+.++
T Consensus 100 ~g~~y~~l~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~ 157 (197)
T 1un2_A 100 DGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVN 157 (197)
T ss_dssp BTTTEEECSSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECS
T ss_pred CCCCceEccCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccC
Confidence 45543 3332 3478999999999999999999998 999999876 4888888765
No 257
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.97 E-value=0.00012 Score=44.70 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=22.1
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
|..|..+|||+|.+....|.+ .|+.+--+.++
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~-------~gi~y~~idi~ 37 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA-------NRIAYDEVDIE 37 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH-------TTCCCEEEETT
T ss_pred EEEEcCCCCHhHHHHHHHHHh-------cCCceEEEEcC
Confidence 455889999999876666544 45666666654
No 258
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.93 E-value=1.4e-05 Score=49.85 Aligned_cols=35 Identities=23% Similarity=0.310 Sum_probs=24.9
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEee
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFP 72 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs 72 (170)
++.|+++|||+|....+.|.++..+++ ++.++-|.
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~--~~~~vdi~ 48 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEG--LLEFVDIT 48 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTT--SEEEEEGG
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCC--ccEEEEcc
Confidence 556899999999999888887644433 25555553
No 259
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.89 E-value=0.00027 Score=48.51 Aligned_cols=105 Identities=9% Similarity=0.059 Sum_probs=67.2
Q ss_pred ccCCcEEEEEEecCCCCCchHhH------HHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHH---HHHhcCCCC
Q 030845 29 IYKGKVLLIVNVASKCGFTDSNY------SQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEF---ACTRYKAEY 99 (170)
Q Consensus 29 ~~~gk~~ll~f~~~~C~~C~~~~------~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~---~~~~~~~~~ 99 (170)
.-.+|+++|++..+||+.|.... +.+.++.++ ++.+.+.+++ +.+....+ +.+..+.
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~----nfV~w~~dv~--------~~e~~~~~~~~~~~~~g~-- 117 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ----NFITWAWDLT--------KDSNRARFLTMCNRHFGS-- 117 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH----TEEEEEEECC--------SHHHHHHHHHHHHHHTCH--
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc----CEEEEEEeCC--------CchhhhhhhhhhhhhhHH--
Confidence 45689999999999999987665 334444443 4788887765 23322222 2110000
Q ss_pred ceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEECCCC---cEEEecCCCCCchhHHHHHHHHhh
Q 030845 100 PIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEG---NVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 100 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G---~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
. .....+. +.+...|.+.+|++.| +++.+..|..+++++.+.|.+.++
T Consensus 118 ~-----------~a~~~~~----------~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e 168 (178)
T 2ec4_A 118 V-----------VAQTIRT----------QKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAME 168 (178)
T ss_dssp H-----------HHHHHHH----------SCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred H-----------HHHHHhh----------cCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 0 0000000 2566679999998764 788999999999999998887764
No 260
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.82 E-value=1.8e-05 Score=55.07 Aligned_cols=43 Identities=9% Similarity=0.108 Sum_probs=35.5
Q ss_pred CCcEEEEEEecCCCCCchHhHHHH---HHHHHHhccCCeEEEEeeCC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQL---TDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~vi~vs~d 74 (170)
.++++|+.|+..+||+|....+.+ .++.+++.+. +.++.+..+
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~-v~~~~~~~~ 65 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEG-TKMTKYHVE 65 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTT-CCEEEEECS
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCC-cEEEEEecc
Confidence 468999999999999999999987 6899999864 666666654
No 261
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.78 E-value=7.1e-06 Score=52.19 Aligned_cols=22 Identities=18% Similarity=0.314 Sum_probs=17.6
Q ss_pred EEEEEecCCCCCchHhHHHHHH
Q 030845 35 LLIVNVASKCGFTDSNYSQLTD 56 (170)
Q Consensus 35 ~ll~f~~~~C~~C~~~~~~l~~ 56 (170)
.++.|+++|||+|....+.|.+
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~ 41 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNK 41 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTT
T ss_pred CEEEEEeCCChhHHHHHHHHHH
Confidence 4566999999999888777654
No 262
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.76 E-value=2.7e-05 Score=50.71 Aligned_cols=20 Identities=10% Similarity=0.345 Sum_probs=17.4
Q ss_pred EEecCCCCCchHhHHHHHHH
Q 030845 38 VNVASKCGFTDSNYSQLTDL 57 (170)
Q Consensus 38 ~f~~~~C~~C~~~~~~l~~~ 57 (170)
.|+++|||+|+...+.|.++
T Consensus 31 vf~~~~Cp~C~~~~~~L~~~ 50 (130)
T 2cq9_A 31 IFSKTSCSYCTMAKKLFHDM 50 (130)
T ss_dssp EEECSSCSHHHHHHHHHHHH
T ss_pred EEEcCCChHHHHHHHHHHHc
Confidence 39999999999988888775
No 263
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.63 E-value=6.5e-05 Score=49.94 Aligned_cols=21 Identities=10% Similarity=0.378 Sum_probs=17.8
Q ss_pred EEEecCCCCCchHhHHHHHHH
Q 030845 37 IVNVASKCGFTDSNYSQLTDL 57 (170)
Q Consensus 37 l~f~~~~C~~C~~~~~~l~~~ 57 (170)
+.|+++|||+|....+.|.++
T Consensus 52 vvf~~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 52 VIFSKTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp EEEECTTCHHHHHHHHHHHHH
T ss_pred EEEECCCChhHHHHHHHHHHc
Confidence 339999999999988888775
No 264
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.52 E-value=0.00023 Score=50.72 Aligned_cols=48 Identities=15% Similarity=0.100 Sum_probs=36.8
Q ss_pred ecCccCCcEEEEEEecCCCCCchHhHHH-HHHHHHHhccC-CeEEEEeeC
Q 030845 26 DLSIYKGKVLLIVNVASKCGFTDSNYSQ-LTDLYNKYKHK-GLEILAFPC 73 (170)
Q Consensus 26 ~l~~~~gk~~ll~f~~~~C~~C~~~~~~-l~~~~~~~~~~-~v~vi~vs~ 73 (170)
.+..-.++++|+.|+.-.||+|...-+. +.++.++|.+. ++.++....
T Consensus 33 ~~G~~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~ 82 (226)
T 3f4s_A 33 LLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHF 82 (226)
T ss_dssp EESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEEC
T ss_pred ccCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeC
Confidence 4555567999999999999999998876 47788888543 477766655
No 265
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.43 E-value=0.00024 Score=44.06 Aligned_cols=23 Identities=30% Similarity=0.374 Sum_probs=19.0
Q ss_pred EEEEEecCCCCCchHhHHHHHHH
Q 030845 35 LLIVNVASKCGFTDSNYSQLTDL 57 (170)
Q Consensus 35 ~ll~f~~~~C~~C~~~~~~l~~~ 57 (170)
.++.|+++|||+|....+.|.+.
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCchHHHHHHHHHHc
Confidence 35558999999999988888775
No 266
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.41 E-value=0.00036 Score=44.51 Aligned_cols=35 Identities=17% Similarity=0.337 Sum_probs=21.8
Q ss_pred EEEEecCCCCCchHh-HHHHHHHHHHhccCCeEEEEeeCC
Q 030845 36 LIVNVASKCGFTDSN-YSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 36 ll~f~~~~C~~C~~~-~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
++.|+++|||+|... .+.| +++....+.+..+.+|
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L----~~~~~~~i~~~~vdid 62 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLF----EKLKVPRSKVLVLQLN 62 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHH----TTSCCCGGGEEEEEGG
T ss_pred EEEEEcCCCcCHHHHHHHHH----HHcCCCCCCeEEEECc
Confidence 455999999999887 4444 3332112666666655
No 267
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.32 E-value=0.0012 Score=39.80 Aligned_cols=22 Identities=14% Similarity=0.173 Sum_probs=17.9
Q ss_pred EEEEecCCCCCchHhHHHHHHH
Q 030845 36 LIVNVASKCGFTDSNYSQLTDL 57 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~ 57 (170)
++.|+++|||+|.+....|.++
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE 35 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc
Confidence 4558899999999988877765
No 268
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.25 E-value=0.00052 Score=43.20 Aligned_cols=22 Identities=9% Similarity=0.324 Sum_probs=17.8
Q ss_pred EEEEecCCCCCchHhHHHHHHH
Q 030845 36 LIVNVASKCGFTDSNYSQLTDL 57 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~ 57 (170)
++.|+++|||+|....+.|.++
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~ 42 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL 42 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 4558999999999888777654
No 269
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.18 E-value=0.0013 Score=39.09 Aligned_cols=21 Identities=5% Similarity=0.138 Sum_probs=16.7
Q ss_pred EEEEecCCCCCchHhHHHHHH
Q 030845 36 LIVNVASKCGFTDSNYSQLTD 56 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~ 56 (170)
++.|+.+|||+|......|.+
T Consensus 6 v~ly~~~~Cp~C~~~~~~L~~ 26 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWFEE 26 (89)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHH
Confidence 566889999999887776654
No 270
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=97.13 E-value=0.0074 Score=42.66 Aligned_cols=94 Identities=9% Similarity=0.049 Sum_probs=62.3
Q ss_pred cEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCCCC
Q 030845 33 KVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNA 112 (170)
Q Consensus 33 k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (170)
+..++.|...||+.|....+.++++.++++++ +.++.+..+. +.....+ +.+++.
T Consensus 132 ~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~---------~~~~~~l-~~fgl~-------------- 186 (227)
T 4f9z_D 132 QIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGM---------KENGKVI-SFFKLK-------------- 186 (227)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTS---------GGGHHHH-HHTTCC--------------
T ss_pred ceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCcc---------HhHHHHH-HHcCCC--------------
Confidence 34445555779999999999999999999876 8888876431 1122233 333331
Q ss_pred chHHHHHhhhcCCccCcccccCceEEEECCCCcEEEec-CCCCCchhHHHHHHHHhhc
Q 030845 113 EPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRY-SPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~~-~g~~~~~~~~~~l~~ll~~ 169 (170)
-...|++.+++..+...+.. .+..+++.|.+.++.+++.
T Consensus 187 ------------------~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~G 226 (227)
T 4f9z_D 187 ------------------ESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSG 226 (227)
T ss_dssp ------------------GGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTT
T ss_pred ------------------cccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCC
Confidence 01246777887655544444 3667889999999988764
No 271
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.94 E-value=0.0025 Score=40.23 Aligned_cols=21 Identities=14% Similarity=0.243 Sum_probs=16.7
Q ss_pred EEEecCCCCCchHhHHHHHHH
Q 030845 37 IVNVASKCGFTDSNYSQLTDL 57 (170)
Q Consensus 37 l~f~~~~C~~C~~~~~~l~~~ 57 (170)
+.|+.+|||+|......|.++
T Consensus 20 ~vy~~~~Cp~C~~ak~~L~~~ 40 (114)
T 3h8q_A 20 VIFSKSYCPHSTRVKELFSSL 40 (114)
T ss_dssp EEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEcCCCCcHHHHHHHHHHc
Confidence 338899999998887777664
No 272
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=96.83 E-value=0.0026 Score=37.15 Aligned_cols=22 Identities=9% Similarity=0.250 Sum_probs=17.8
Q ss_pred EEEEecCCCCCchHhHHHHHHH
Q 030845 36 LIVNVASKCGFTDSNYSQLTDL 57 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~ 57 (170)
++.|+++|||+|......|.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~ 24 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK 24 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHC
Confidence 4568899999999888877764
No 273
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.79 E-value=0.0031 Score=38.78 Aligned_cols=25 Identities=16% Similarity=0.171 Sum_probs=19.7
Q ss_pred cEEEEEEecCCCCCchHhHHHHHHH
Q 030845 33 KVLLIVNVASKCGFTDSNYSQLTDL 57 (170)
Q Consensus 33 k~~ll~f~~~~C~~C~~~~~~l~~~ 57 (170)
+..++.|+++|||+|.+....|.+.
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak~~L~~~ 39 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRALALLKRK 39 (99)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHC
Confidence 3445559999999999988888765
No 274
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=96.74 E-value=0.013 Score=40.76 Aligned_cols=40 Identities=5% Similarity=-0.090 Sum_probs=32.2
Q ss_pred cccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 129 SRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 129 ~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
.+|.++|+ |+|+.+|+.+....|..+.+.+.+.|++++++
T Consensus 165 ~gv~g~Pt-~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~~~ 204 (208)
T 3kzq_A 165 LGVNSYPS-LVLQINDAYFPIEVDYLSTEPTLKLIRERIIE 204 (208)
T ss_dssp TTCCSSSE-EEEEETTEEEEECCCSSCSHHHHHHHHHHHHH
T ss_pred cCCCcccE-EEEEECCEEEEeeCCCCCHHHHHHHHHHHHhc
Confidence 67888898 55667787777777888899999999998864
No 275
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.60 E-value=0.0051 Score=38.04 Aligned_cols=33 Identities=24% Similarity=0.472 Sum_probs=22.5
Q ss_pred EEEEEEec-----CCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 34 VLLIVNVA-----SKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 34 ~~ll~f~~-----~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
.++| |+. +|||+|....+.|.++ ++.+..+.++
T Consensus 18 ~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~ 55 (105)
T 2yan_A 18 SVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDIL 55 (105)
T ss_dssp SEEE-EESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGG
T ss_pred CEEE-EEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECC
Confidence 3444 665 9999999888888765 3555555554
No 276
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.58 E-value=0.004 Score=37.31 Aligned_cols=32 Identities=16% Similarity=0.295 Sum_probs=22.8
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
++.|+++|||+|+...+.|.+. ++.+..+.++
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~-------~i~~~~~di~ 39 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARK-------GAEFNEIDAS 39 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEST
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCcEEEECC
Confidence 5568899999999887777653 4555555554
No 277
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.22 E-value=0.022 Score=35.42 Aligned_cols=26 Identities=31% Similarity=0.540 Sum_probs=19.1
Q ss_pred CCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 42 SKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 42 ~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
+|||+|......|.+. ++.+..+.++
T Consensus 28 ~~Cp~C~~ak~~L~~~-------~i~~~~vdi~ 53 (109)
T 1wik_A 28 AKCGFSKQILEILNST-------GVEYETFDIL 53 (109)
T ss_dssp CCSSTHHHHHHHHHHT-------CSCEEEEESS
T ss_pred CCCchHHHHHHHHHHc-------CCCeEEEECC
Confidence 8999998887777653 4666666655
No 278
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=96.17 E-value=0.0043 Score=36.99 Aligned_cols=22 Identities=14% Similarity=0.332 Sum_probs=18.1
Q ss_pred EEEEecCCCCCchHhHHHHHHH
Q 030845 36 LIVNVASKCGFTDSNYSQLTDL 57 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~ 57 (170)
++.|+++|||+|....+.|.+.
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~ 29 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKK 29 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 5568899999999888877764
No 279
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.12 E-value=0.0091 Score=38.54 Aligned_cols=20 Identities=10% Similarity=0.361 Sum_probs=14.9
Q ss_pred EEEEecCCCCCchHh-HHHHH
Q 030845 36 LIVNVASKCGFTDSN-YSQLT 55 (170)
Q Consensus 36 ll~f~~~~C~~C~~~-~~~l~ 55 (170)
++.|+.+|||+|... .+.|.
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~ 59 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQ 59 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHT
T ss_pred EEEEECCCCCchHHHHHHHHH
Confidence 556889999999877 44443
No 280
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=95.53 E-value=0.026 Score=39.18 Aligned_cols=54 Identities=17% Similarity=0.160 Sum_probs=39.1
Q ss_pred CCCCeeecCccCCcEEEEEEecCCCCCchHhHHHH-HHHHHHhccC-CeEEEEeeCC
Q 030845 20 SKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQL-TDLYNKYKHK-GLEILAFPCN 74 (170)
Q Consensus 20 ~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l-~~~~~~~~~~-~v~vi~vs~d 74 (170)
..|.++ +..-.++++|+.|+.-.||+|...-+.+ ..+.++|.+. ++.++...+.
T Consensus 18 ~~~~~~-~G~~~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 18 IKGQPV-LGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp CTTSCE-ESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred CCCCce-ecCCCCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 345443 4555679999999999999999888876 5666778643 4777776653
No 281
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=95.31 E-value=0.0097 Score=43.45 Aligned_cols=40 Identities=10% Similarity=0.250 Sum_probs=32.1
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPC 73 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~ 73 (170)
.|+.+|+.|+-..||+|++..+.+.+..+. -.|.++.+..
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~---~~Vr~i~~Pi 185 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE---NTVRMVVVGW 185 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH---CEEEEEECCC
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC---CcEEEEEeec
Confidence 578999999999999999999999976654 3366666543
No 282
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=94.90 E-value=0.029 Score=36.12 Aligned_cols=48 Identities=17% Similarity=0.343 Sum_probs=29.0
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHH
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFAC 92 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~ 92 (170)
++.|..+|||+|.+....|.+... + ...+.++-|..+. +.++++++++
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~~~-~-~v~~~~idid~~~-------d~~~~~~~l~ 63 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENEYQ-F-IPNYYIIELDKHG-------HGEELQEYIK 63 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHEE-E-ESCCEEEEGGGST-------THHHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHHHHhcc-c-CCCcEEEEecCCC-------CHHHHHHHHH
Confidence 455788999999888877776310 1 1125566664331 3456666664
No 283
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.67 E-value=0.15 Score=31.74 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=20.7
Q ss_pred EEEEecCCCCCchH--hHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 36 LIVNVASKCGFTDS--NYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 36 ll~f~~~~C~~C~~--~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
|+.|..++||.|.. ......++.++ .++.+..+.++
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~L~~---~gi~y~~vdI~ 47 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRFLEA---NKIEFEEVDIT 47 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH---TTCCEEEEETT
T ss_pred EEEEEcCCCCCcccchhHHHHHHHHHH---cCCCEEEEECC
Confidence 44577899999972 22233333333 45666666654
No 284
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=94.61 E-value=0.027 Score=38.53 Aligned_cols=43 Identities=19% Similarity=0.276 Sum_probs=34.1
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeC
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPC 73 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~ 73 (170)
.++++|+.|.--.||+|.+..+.+.++.+++....|.++.-..
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~ 55 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQ 55 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEc
Confidence 4689999999999999999999998888876222377776654
No 285
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=94.54 E-value=0.043 Score=37.25 Aligned_cols=44 Identities=20% Similarity=0.281 Sum_probs=33.2
Q ss_pred cCCcEEEEEEecCCCCCchHhHHHH-HHHHHHhccC-CeEEEEeeC
Q 030845 30 YKGKVLLIVNVASKCGFTDSNYSQL-TDLYNKYKHK-GLEILAFPC 73 (170)
Q Consensus 30 ~~gk~~ll~f~~~~C~~C~~~~~~l-~~~~~~~~~~-~v~vi~vs~ 73 (170)
-.++++|+.|+...||+|....+.+ ..+.++|.+. ++.++...+
T Consensus 9 ~~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~ 54 (186)
T 3bci_A 9 KNGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNL 54 (186)
T ss_dssp --CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEC
T ss_pred CCCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEec
Confidence 3567889999999999999999998 5677888653 366666554
No 286
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=94.26 E-value=0.18 Score=29.65 Aligned_cols=21 Identities=33% Similarity=0.302 Sum_probs=15.8
Q ss_pred EEEEecC----CCCCchHhHHHHHH
Q 030845 36 LIVNVAS----KCGFTDSNYSQLTD 56 (170)
Q Consensus 36 ll~f~~~----~C~~C~~~~~~l~~ 56 (170)
++.|+.+ |||.|.+....|.+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~ 26 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV 26 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH
Confidence 3457789 99999877766655
No 287
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=94.25 E-value=0.72 Score=33.55 Aligned_cols=38 Identities=11% Similarity=0.158 Sum_probs=27.4
Q ss_pred EEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 34 VLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 34 ~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
..|..|+..+||+|+..-..|.++..+ .++..+.+..+
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~v~ 81 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQK---GDVVGLSYHVD 81 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHH---TSSEEEEEECS
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhcc---CCeeeEEEEEE
Confidence 466667789999999999999888765 34544455543
No 288
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=94.15 E-value=0.26 Score=29.35 Aligned_cols=12 Identities=33% Similarity=0.191 Sum_probs=9.7
Q ss_pred EEEEecCCCCCc
Q 030845 36 LIVNVASKCGFT 47 (170)
Q Consensus 36 ll~f~~~~C~~C 47 (170)
++.|..++||.|
T Consensus 4 v~ly~~~~C~~c 15 (93)
T 1t1v_A 4 LRVYSTSVTGSR 15 (93)
T ss_dssp EEEEECSSCSCH
T ss_pred EEEEEcCCCCCc
Confidence 445778999999
No 289
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=94.12 E-value=0.47 Score=35.52 Aligned_cols=96 Identities=8% Similarity=-0.014 Sum_probs=59.0
Q ss_pred cEEEEEEecCCCCCchHhHHHHHHHHHHhcc-CCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCCC
Q 030845 33 KVLLIVNVASKCGFTDSNYSQLTDLYNKYKH-KGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPN 111 (170)
Q Consensus 33 k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (170)
+..++.|...+|+.|...+..|+++.++++. ..+.++.+..+. -.....|+.+.+++.
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~--------~~~~~~~~~~~~gi~------------- 304 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDD--------FPLLVAYWEKTFKID------------- 304 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGG--------CHHHHHHHHHHCCSC-------------
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchh--------hHHHHHHHHhhcCCC-------------
Confidence 4444557778998899999999999999974 457777775331 122222221233331
Q ss_pred CchHHHHHhhhcCCccCcccccCceEEEECCCCcEEEe--c---CCCCCchhHHHHHHHHhhc
Q 030845 112 AEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGR--Y---SPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~i~~~--~---~g~~~~~~~~~~l~~ll~~ 169 (170)
...|++.+++....-.+. . .+..+++.+.+.++.+++.
T Consensus 305 --------------------~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~G 347 (350)
T 1sji_A 305 --------------------LFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSG 347 (350)
T ss_dssp --------------------TTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHHTS
T ss_pred --------------------ccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHHhcC
Confidence 013677788773322333 2 2366788899999988763
No 290
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=93.99 E-value=0.17 Score=35.22 Aligned_cols=48 Identities=13% Similarity=-0.056 Sum_probs=36.4
Q ss_pred ecCccCCcEEEEEEecCCCCCchHhHHHHHHHHH-HhccC-CeEEEEeeC
Q 030845 26 DLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYN-KYKHK-GLEILAFPC 73 (170)
Q Consensus 26 ~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~-~~~~~-~v~vi~vs~ 73 (170)
.+..-.++++|+.|.--.||+|....+.+....+ +|-+. .|.++....
T Consensus 9 ~~G~~~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 9 LLGNPAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp EESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred eecCCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 4555678999999999999999999888766555 77332 477776655
No 291
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=93.93 E-value=0.29 Score=37.04 Aligned_cols=96 Identities=8% Similarity=-0.011 Sum_probs=60.9
Q ss_pred cEEEEEEecCCCCCchHhHHHHHHHHHHhccC-CeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCCC
Q 030845 33 KVLLIVNVASKCGFTDSNYSQLTDLYNKYKHK-GLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPN 111 (170)
Q Consensus 33 k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (170)
++.++.|...+|+.|...+..|+++.+++++. .+.++.+..+. ....+ .++.+.+++.
T Consensus 248 ~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~-------~~~~l-~~~~~~fgl~------------- 306 (367)
T 3us3_A 248 GIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDD-------FPLLV-PYWEKTFDID------------- 306 (367)
T ss_dssp TEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGG-------CTTTH-HHHHHHHTCC-------------
T ss_pred CcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCcc-------chhHH-HHHHHhcCCC-------------
Confidence 35566677778888889999999999999875 48888886542 11111 2211222321
Q ss_pred CchHHHHHhhhcCCccCcccccCceEEEECCCCc--EEEecC---CCCCchhHHHHHHHHhhc
Q 030845 112 AEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGN--VIGRYS---PTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~v~~~p~~~lid~~G~--i~~~~~---g~~~~~~~~~~l~~ll~~ 169 (170)
...|.+.+++.... ..+.+. +..+.+.+.+.++.+++.
T Consensus 307 --------------------~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~G 349 (367)
T 3us3_A 307 --------------------LSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEG 349 (367)
T ss_dssp --------------------TTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHT
T ss_pred --------------------CCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcC
Confidence 12467788887654 233233 257888899999988763
No 292
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=93.86 E-value=0.74 Score=29.22 Aligned_cols=36 Identities=14% Similarity=0.018 Sum_probs=27.8
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEe
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAF 71 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~v 71 (170)
..++++|-||.+||..| .+.+.++.+.+ + ++.+..+
T Consensus 38 ~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~-d~~F~~t 73 (124)
T 2l4c_A 38 ATEVAVIGFFQDLEIPA---VPILHSMVQKF-P-GVSFGIS 73 (124)
T ss_dssp TSSEEEEEECSCTTSTH---HHHHHHHHHHC-T-TSEEEEE
T ss_pred cCCCEEEEEECCCCChh---HHHHHHHHHhC-C-CceEEEE
Confidence 35799999999999988 56777777877 3 3776555
No 293
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=93.60 E-value=0.079 Score=34.41 Aligned_cols=34 Identities=18% Similarity=0.284 Sum_probs=20.8
Q ss_pred EEEEEEec----CCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 34 VLLIVNVA----SKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 34 ~~ll~f~~----~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
.++|+.++ +|||.|......|.+. |+.+..+.++
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-------gv~y~~vdI~ 73 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAAC-------GERFAYVDIL 73 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHTT-------CSCCEEEEGG
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHHc-------CCceEEEECC
Confidence 34554444 7999998777666543 4555555544
No 294
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=92.17 E-value=0.28 Score=30.51 Aligned_cols=24 Identities=17% Similarity=0.419 Sum_probs=16.9
Q ss_pred CcEEEEEEec-----CCCCCchHhHHHHHH
Q 030845 32 GKVLLIVNVA-----SKCGFTDSNYSQLTD 56 (170)
Q Consensus 32 gk~~ll~f~~-----~~C~~C~~~~~~l~~ 56 (170)
...++| |.. +|||.|.+....|.+
T Consensus 15 ~~~Vvl-f~kg~~~~~~Cp~C~~ak~~L~~ 43 (111)
T 3zyw_A 15 AAPCML-FMKGTPQEPRCGFSKQMVEILHK 43 (111)
T ss_dssp SSSEEE-EESBCSSSBSSHHHHHHHHHHHH
T ss_pred cCCEEE-EEecCCCCCcchhHHHHHHHHHH
Confidence 344555 555 899999887777765
No 295
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=92.16 E-value=0.74 Score=29.02 Aligned_cols=25 Identities=20% Similarity=0.454 Sum_probs=16.8
Q ss_pred cEEEEEEec----CCCCCchHhHHHHHHH
Q 030845 33 KVLLIVNVA----SKCGFTDSNYSQLTDL 57 (170)
Q Consensus 33 k~~ll~f~~----~~C~~C~~~~~~l~~~ 57 (170)
..++|+--. +|||+|......|.+.
T Consensus 16 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~ 44 (121)
T 3gx8_A 16 APVVLFMKGTPEFPKCGFSRATIGLLGNQ 44 (121)
T ss_dssp CSEEEEESBCSSSBCTTHHHHHHHHHHHH
T ss_pred CCEEEEEeccCCCCCCccHHHHHHHHHHc
Confidence 344553334 3999998888777765
No 296
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=91.57 E-value=0.47 Score=30.43 Aligned_cols=52 Identities=10% Similarity=0.108 Sum_probs=33.5
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCC
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEY 99 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (170)
+..|+.++|+.|.+....|.+ .|+.+-.+.++. ++.+.+++++++ ...+.++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~----~~~~~~el~~~l-~~~~~~~ 54 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE-------HEIPFVERNIFS----EPLSIDEIKQIL-RMTEDGT 54 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEETTT----SCCCHHHHHHHH-HTCSSCG
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEccC----CCccHHHHHHHH-HHcCCCH
Confidence 445678999999888777765 345544444432 344678888888 3445543
No 297
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=89.94 E-value=0.48 Score=29.21 Aligned_cols=16 Identities=31% Similarity=0.721 Sum_probs=12.0
Q ss_pred CCCCCchHhHHHHHHH
Q 030845 42 SKCGFTDSNYSQLTDL 57 (170)
Q Consensus 42 ~~C~~C~~~~~~l~~~ 57 (170)
+|||+|.+....|.+.
T Consensus 31 p~Cp~C~~ak~~L~~~ 46 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL 46 (109)
T ss_dssp BSSHHHHHHHHHHHHT
T ss_pred CCChhHHHHHHHHHHc
Confidence 3999998877777653
No 298
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=89.93 E-value=0.86 Score=28.65 Aligned_cols=15 Identities=27% Similarity=0.541 Sum_probs=11.4
Q ss_pred CCCCchHhHHHHHHH
Q 030845 43 KCGFTDSNYSQLTDL 57 (170)
Q Consensus 43 ~C~~C~~~~~~l~~~ 57 (170)
|||+|.+....|.+.
T Consensus 34 ~Cp~C~~ak~lL~~~ 48 (118)
T 2wem_A 34 QCGFSNAVVQILRLH 48 (118)
T ss_dssp SSHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHc
Confidence 999998777766653
No 299
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=89.87 E-value=0.76 Score=28.93 Aligned_cols=52 Identities=8% Similarity=0.063 Sum_probs=33.8
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCC
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEY 99 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (170)
+..|..++|+.|++....|.+ .|+.+-.+.+. .++.+.+++++++ ...+.++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~el~~~l-~~~~~~~ 53 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR-------HDVVFQEHNIM----TSPLSRDELLKIL-SYTENGT 53 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEETT----TSCCCHHHHHHHH-HHCSSTH
T ss_pred EEEEeCCCCHHHHHHHHHHHH-------cCCCeEEEecc----cCCCcHHHHHHHH-hhcCCCH
Confidence 344668899999888777764 34555444443 2345789999998 4545543
No 300
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=89.61 E-value=7.6 Score=31.83 Aligned_cols=145 Identities=13% Similarity=0.113 Sum_probs=74.5
Q ss_pred CCCCCcccceEeec-CCCCeeecCc-c--CCcEEEEEEecCCC-CCchHhHHHHHHHH-------HHhcc------CCeE
Q 030845 6 SVPQKSIYEFTVKD-SKGKDVDLSI-Y--KGKVLLIVNVASKC-GFTDSNYSQLTDLY-------NKYKH------KGLE 67 (170)
Q Consensus 6 ~~~~~~~p~f~l~~-~~G~~v~l~~-~--~gk~~ll~f~~~~C-~~C~~~~~~l~~~~-------~~~~~------~~v~ 67 (170)
..+|..+|++.+.. .+|+++++.+ + .|+.+||.|-..-. +.+...+..+.+.. .+|.. .-+.
T Consensus 479 ~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 558 (665)
T 1pn0_A 479 CVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGKATDATQMSRIKKFAAYLDSENSVISRYTPKGADRNSRID 558 (665)
T ss_dssp SCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEECTTSHHHHHHHHHHHHHHHSTTSHHHHHSBTTSCTTSSEE
T ss_pred CCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCCcccchhHHHHHHHHHHhhccccHHhhcCCcccCccceeE
Confidence 36899999999976 5898888888 4 36999998865422 12333333333322 23321 1267
Q ss_pred EEEeeCCCCCCCCCCCHHHHHHHHH--HhcCCC-CceeEEeecCCCCCchHHHHHhhhcCCccCccccc-CceEEEECCC
Q 030845 68 ILAFPCNQFLKQEPGTSQEAHEFAC--TRYKAE-YPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKW-NFTKFLVDTE 143 (170)
Q Consensus 68 vi~vs~d~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~p~~~lid~~ 143 (170)
++.|...+ .... ++..+-. -+-+.. ..++.|..........+|.. |++.. ...++||-||
T Consensus 559 ~~~i~~~~-----~~~~-~~~~~p~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----------~g~~~~~g~~vlvRPD 622 (665)
T 1pn0_A 559 VITIHSCH-----RDDI-EMHDFPAPALHPKWQYDFIYADCDSWHHPHPKSYQA----------WGVDETKGAVVVVRPD 622 (665)
T ss_dssp EEEEESSC-----TTSC-CGGGSCTTTTSCTTCCSSEEECSCCSSSCCCCHHHH----------HTBCTTTCEEEEECTT
T ss_pred EEEEecCC-----CCcc-chhhCCHHHcCcccchheEeecCcccccccccHHHH----------cCCCCCCceEEEECCC
Confidence 77774321 0000 0001100 000112 23444321111111223443 24542 2477999999
Q ss_pred CcEEEecCCCCCchhHHHHHHHHh
Q 030845 144 GNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 144 G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
|.|-++... ...+.+.+.+..++
T Consensus 623 ~yV~~~~~~-~~~~~l~~~~~~~~ 645 (665)
T 1pn0_A 623 GYTSLVTDL-EGTAEIDRYFSGIL 645 (665)
T ss_dssp SBEEEEECT-TTHHHHHHHHHTTB
T ss_pred CcEEEEecc-ccHHHHHHHHHHHh
Confidence 999987642 23556777776665
No 301
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=88.90 E-value=0.3 Score=30.50 Aligned_cols=48 Identities=4% Similarity=0.079 Sum_probs=30.4
Q ss_pred EEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcC
Q 030845 37 IVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYK 96 (170)
Q Consensus 37 l~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
..|..++|+.|++....|.+. +..++++-|.-+ +.+.+++++++. +.+
T Consensus 3 ~iY~~~~C~~C~kak~~L~~~-----gi~~~~~di~~~------~~~~~~l~~~~~-~~g 50 (114)
T 1rw1_A 3 VLYGIKACDTMKKARTWLDEH-----KVAYDFHDYKAV------GIDREHLRRWCA-EHG 50 (114)
T ss_dssp EEEECSSCHHHHHHHHHHHHT-----TCCEEEEEHHHH------CCCHHHHHHHHH-HHC
T ss_pred EEEECCCChHHHHHHHHHHHC-----CCceEEEeecCC------CCCHHHHHHHHH-hCC
Confidence 446688999998887777652 122444555322 346788888884 544
No 302
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=88.83 E-value=2.2 Score=26.96 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=22.2
Q ss_pred EEEEecCCCCCch--HhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 36 LIVNVASKCGFTD--SNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 36 ll~f~~~~C~~C~--~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
|..|..+.||.|. +.....+.+.+. +||.+--+.++
T Consensus 2 V~vYtt~~c~~c~~kk~c~~aK~lL~~---kgV~feEidI~ 39 (121)
T 1u6t_A 2 IRVYIASSSGSTAIKKKQQDVLGFLEA---NKIGFEEKDIA 39 (121)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHHHHHH---TTCCEEEEECT
T ss_pred EEEEecCCCCCccchHHHHHHHHHHHH---CCCceEEEECC
Confidence 4557789999994 344445555444 45666666554
No 303
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=88.74 E-value=1.4 Score=27.78 Aligned_cols=53 Identities=15% Similarity=0.186 Sum_probs=34.8
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCc
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYP 100 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (170)
+..|..++|+.|++...-|.+. +..++++-+.- ++.+.+++..++ ...+.++.
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~~-----gi~~~~~di~~------~~~~~~eL~~~l-~~~g~~~~ 57 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDDL-----AWDYDAIDIKK------NPPAASLIRNWL-ENSGLELK 57 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----TCCEEEEETTT------SCCCHHHHHHHH-HHSCCCGG
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----CCceEEEEecc------CchhHHHHHHHH-HHcCCCHH
Confidence 3445688999999888777653 11244444433 346789999998 46676544
No 304
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=87.37 E-value=3.6 Score=28.80 Aligned_cols=38 Identities=11% Similarity=-0.085 Sum_probs=25.8
Q ss_pred cccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHH
Q 030845 129 SRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNA 166 (170)
Q Consensus 129 ~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~l 166 (170)
++|...|++++++++|++.........-+.+...|+++
T Consensus 201 f~v~~~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 201 FGVTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp HTCCCSSEEEEEETTSCEEECCCSSSSHHHHHHHHHTC
T ss_pred cCCCCCCeEEEEeCCCCeEeeccccccHHHHHHHHHhC
Confidence 47888999999999999887654332333344444443
No 305
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=86.61 E-value=1 Score=28.37 Aligned_cols=52 Identities=8% Similarity=-0.041 Sum_probs=34.1
Q ss_pred EEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCCc
Q 030845 37 IVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYP 100 (170)
Q Consensus 37 l~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (170)
..|..++|+.|++....|.+. +..++++-+.- ++.+.+++.+++ ...+.++.
T Consensus 7 ~iY~~p~C~~c~ka~~~L~~~-----gi~~~~~di~~------~~~~~~eL~~~l-~~~g~~~~ 58 (120)
T 3gkx_A 7 LFLQYPACSTCQKAKKWLIEN-----NIEYTNRLIVD------DNPTVEELKAWI-PLSGLPVK 58 (120)
T ss_dssp EEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTT------TCCCHHHHHHHH-HHHTSCGG
T ss_pred EEEECCCChHHHHHHHHHHHc-----CCceEEEeccc------CcCCHHHHHHHH-HHcCCCHH
Confidence 345688999998887777642 11244555533 345789999998 46676544
No 306
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=86.19 E-value=0.81 Score=31.47 Aligned_cols=40 Identities=8% Similarity=-0.196 Sum_probs=31.2
Q ss_pred cccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 129 SRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 129 ~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
.+|..+|++++. .+|+.+....|..+.+.+.+.|++++++
T Consensus 172 ~gv~g~Pt~~i~-~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 211 (216)
T 2in3_A 172 WGISGFPALVVE-SGTDRYLITTGYRPIEALRQLLDTWLQQ 211 (216)
T ss_dssp TTCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEE-ECCEEEEeccCCCCHHHHHHHHHHHHHh
Confidence 678889996654 4687655677888889999999988764
No 307
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=86.17 E-value=0.45 Score=29.95 Aligned_cols=49 Identities=8% Similarity=0.053 Sum_probs=31.5
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcC
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYK 96 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
+..|..++|+.|++....|.+. +..++++-|.-+ +.+.++++++. ++.+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~-----gi~y~~~di~~~------~~~~~~l~~~~-~~~g 55 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH-----GIDYTFHDYKKE------GLDAETLDRFL-KTVP 55 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----TCCEEEEEHHHH------CCCHHHHHHHH-HHSC
T ss_pred EEEEECCCChHHHHHHHHHHHc-----CCcEEEEeeeCC------CCCHHHHHHHH-HHcC
Confidence 3446688999999888877763 112444554322 34678888888 4555
No 308
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=86.05 E-value=1 Score=28.26 Aligned_cols=38 Identities=18% Similarity=0.266 Sum_probs=27.7
Q ss_pred cEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCC
Q 030845 33 KVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQ 75 (170)
Q Consensus 33 k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~ 75 (170)
|.+||-|.-+.|+.|......|+ ++.++ .+++-|++=.
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~----~lede-Y~ilrVNIlS 39 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVE----ELKSE-YDILHVDILS 39 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHH----TTTTT-EEEEEEECCC
T ss_pred CceEEEeCCCccHHHHHHHHHHH----Hhhcc-ccEEEEEeee
Confidence 67889899999999987777774 44443 6666666543
No 309
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=84.69 E-value=15 Score=29.93 Aligned_cols=148 Identities=11% Similarity=0.069 Sum_probs=75.1
Q ss_pred CCCCCcccceEeec-CCCCeeecCcc---CCcEEEEEEecCCCCCch-HhHHHHHHHH--------HHhccC------Ce
Q 030845 6 SVPQKSIYEFTVKD-SKGKDVDLSIY---KGKVLLIVNVASKCGFTD-SNYSQLTDLY--------NKYKHK------GL 66 (170)
Q Consensus 6 ~~~~~~~p~f~l~~-~~G~~v~l~~~---~gk~~ll~f~~~~C~~C~-~~~~~l~~~~--------~~~~~~------~v 66 (170)
..+|..+|+..+.. .+|+++++.++ .|+.+||.|-....+.+. ..+..+.+.. .+|... -+
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 546 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAFAAQNDLAQPESGLLALCRFLEGDAASPLRRFTPAGQDIDSIF 546 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEECCTTTTTCTTSHHHHHHHHHHHCTTCHHHHHSCTTSCTTSSE
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEecCCCCchhhHHHHHHHHHHHhhCCccHHHhcCCCCCCcCceE
Confidence 35899999999876 58999888884 369999998654444443 3333443322 244321 26
Q ss_pred EEEEeeCCCCCCCC-CCCHHHHHHHHHHhcCC-CC-ceeEEeecCCCCCchHHHHHhhhcCCccCccccc-CceEEEECC
Q 030845 67 EILAFPCNQFLKQE-PGTSQEAHEFACTRYKA-EY-PIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKW-NFTKFLVDT 142 (170)
Q Consensus 67 ~vi~vs~d~~~~~~-~~~~~~~~~~~~~~~~~-~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~p~~~lid~ 142 (170)
.++.|...+....+ .+-++.++.+. ..++. .| .++.|..... ...++.. |++.. ...++||-|
T Consensus 547 ~~~~i~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~d~~~~~--~~~~~~~----------~g~~~~~g~~v~vRP 613 (639)
T 2dkh_A 547 DLRAVFPQAYTEVALETLPALLLPPK-GQLGMIDYEKVFSPDLKNA--GQDIFEL----------RGIDRQQGALVVVRP 613 (639)
T ss_dssp EEEEECSSCGGGCCGGGSCGGGSCEE-TTTTEECCCSEEECCCSST--TCCHHHH----------TTBCTTTCEEEEECT
T ss_pred EEEEEecCCCCccchhhCcHhhCCcc-cccccccceeEEeCCCccc--ccchHHH----------hCCCCCceEEEEECC
Confidence 77766322100000 00001111110 11121 22 3444311000 0123433 34542 347799999
Q ss_pred CCcEEEecCCCCCchhHHHHHHHHh
Q 030845 143 EGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 143 ~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
||.|-++... ...+.+.+.+..++
T Consensus 614 D~yv~~~~~~-~~~~~l~~~~~~~~ 637 (639)
T 2dkh_A 614 DQYVAQVLPL-GDHAALSAYFESFM 637 (639)
T ss_dssp TSBEEEEECT-TCHHHHHHHHHTTB
T ss_pred CCceEEeech-hhHHHHHHHHHHHh
Confidence 9998887532 24556777766554
No 310
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=84.08 E-value=1.3 Score=28.74 Aligned_cols=49 Identities=10% Similarity=0.152 Sum_probs=32.0
Q ss_pred EEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCC
Q 030845 38 VNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAE 98 (170)
Q Consensus 38 ~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~ 98 (170)
.|..++|+.|++....|.+ .|+.+-.+.+. .++.+.+++.++. ...+.+
T Consensus 6 iY~~p~C~~crkak~~L~~-------~gi~~~~idi~----~~~~~~~eL~~~~-~~~g~p 54 (141)
T 1s3c_A 6 IYHNPASGTSRNTLEMIRN-------SGTEPTIILYL----ENPPSRDELVKLI-ADMGIS 54 (141)
T ss_dssp EECCTTCHHHHHHHHHHHH-------TTCCCEEECTT----TSCCCHHHHHHHH-HHHTSC
T ss_pred EEECCCChHHHHHHHHHHH-------cCCCEEEEECC----CCCccHHHHHHHh-cccCCC
Confidence 4567899999887777665 34554444443 2345788888888 455554
No 311
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=82.48 E-value=1.9 Score=27.09 Aligned_cols=50 Identities=8% Similarity=0.198 Sum_probs=32.9
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCC
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKA 97 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~ 97 (170)
+..|..++|+.|++...-|.+ .|+.+-.+.+. .++.+.++++.++ ...+.
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~----~~~~~~~eL~~~l-~~~g~ 56 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ-------QGITPQVVLYL----ETPPSVDKLKELL-QQLGF 56 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT-------TTCCCEEECTT----TSCCCHHHHHHHH-HHTTC
T ss_pred EEEEECCCCHHHHHHHHHHHH-------cCCCcEEEeec----cCCCcHHHHHHHH-HhcCC
Confidence 334568899999887776653 44544444332 2356789999998 46665
No 312
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=81.01 E-value=12 Score=26.28 Aligned_cols=34 Identities=9% Similarity=-0.061 Sum_probs=25.0
Q ss_pred CceEEEECCCCcEEEecCCCCCchh--HHHHHHHHhh
Q 030845 134 NFTKFLVDTEGNVIGRYSPTTSPMA--IEGDIKNALG 168 (170)
Q Consensus 134 ~p~~~lid~~G~i~~~~~g~~~~~~--~~~~l~~ll~ 168 (170)
.|.+.++|.++. .+...+..+.+. +.+.++.+++
T Consensus 195 ~P~v~i~~~~~~-ky~~~~~~t~~~~~i~~F~~~~~~ 230 (252)
T 2h8l_A 195 IPVVAIRTAKGE-KFVMQEEFSRDGKALERFLQDYFD 230 (252)
T ss_dssp SCEEEEECTTSC-EEECCSCCCTTSHHHHHHHHHHHH
T ss_pred CCEEEEEeCcCc-EecCCcccCcchHHHHHHHHHHHC
Confidence 477788887665 455556677777 9999988875
No 313
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=79.87 E-value=12 Score=25.74 Aligned_cols=36 Identities=14% Similarity=0.060 Sum_probs=27.4
Q ss_pred CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEe
Q 030845 31 KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAF 71 (170)
Q Consensus 31 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~v 71 (170)
..+++||-|+++|| ....+.+.++.+.+. .+.+...
T Consensus 26 ~~~v~vVgff~~~~---~~~~~~f~~~A~~l~--~~~F~~t 61 (227)
T 4f9z_D 26 ATEVAVIGFFQDLE---IPAVPILHSMVQKFP--GVSFGIS 61 (227)
T ss_dssp TSSEEEEEECSCSC---STHHHHHHHHTTTCT--TSEEEEE
T ss_pred cCCeEEEEEecCCC---chhHHHHHHHHHhCC--CceEEEE
Confidence 35799999999885 577888888888883 4666554
No 314
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=77.17 E-value=2.8 Score=28.71 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=26.7
Q ss_pred cccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 129 SRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 129 ~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
.+|..+|+++| +|+. ..|..+.+.+.+.|++++++
T Consensus 159 ~gV~gtPtfvv---nG~~---~~G~~~~e~l~~~i~~~~~~ 193 (202)
T 3gha_A 159 MNIQATPTIYV---NDKV---IKNFADYDEIKETIEKELKG 193 (202)
T ss_dssp TTCCSSCEEEE---TTEE---CSCTTCHHHHHHHHHHHHHH
T ss_pred cCCCcCCEEEE---CCEE---ecCCCCHHHHHHHHHHHHHh
Confidence 57888999665 5764 45777889999999888753
No 315
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=77.15 E-value=2.3 Score=29.08 Aligned_cols=38 Identities=11% Similarity=0.092 Sum_probs=25.7
Q ss_pred EEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEee
Q 030845 34 VLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFP 72 (170)
Q Consensus 34 ~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs 72 (170)
+.|..|+-..||.|-...+.+.++.+ +.+.++.+.-..
T Consensus 8 ~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~ 45 (216)
T 2in3_A 8 PVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMP 45 (216)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred eeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEee
Confidence 45666677799999977788888777 433345554443
No 316
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=76.11 E-value=1.8 Score=32.88 Aligned_cols=16 Identities=13% Similarity=0.432 Sum_probs=10.6
Q ss_pred EEEecCCCCCchHhHH
Q 030845 37 IVNVASKCGFTDSNYS 52 (170)
Q Consensus 37 l~f~~~~C~~C~~~~~ 52 (170)
+.|..+|||+|.+...
T Consensus 264 vVYsk~~CPyC~~Ak~ 279 (362)
T 2jad_A 264 FVASKTYCPYSHAALN 279 (362)
T ss_dssp EEEECTTCHHHHHHHH
T ss_pred EEEEcCCCcchHHHHH
Confidence 3366788888866543
No 317
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=76.06 E-value=1.2 Score=31.27 Aligned_cols=24 Identities=17% Similarity=0.205 Sum_probs=18.0
Q ss_pred EEEEEEecCCCCCchHhHHHHHHH
Q 030845 34 VLLIVNVASKCGFTDSNYSQLTDL 57 (170)
Q Consensus 34 ~~ll~f~~~~C~~C~~~~~~l~~~ 57 (170)
..++.|..+|||.|.+....|.+.
T Consensus 170 ~~i~ly~~~~Cp~C~~a~~~L~~~ 193 (241)
T 1nm3_A 170 ESISIFTKPGCPFCAKAKQLLHDK 193 (241)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHH
T ss_pred ceEEEEECCCChHHHHHHHHHHHc
Confidence 345567889999999887777653
No 318
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=76.05 E-value=3.1 Score=28.70 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=26.9
Q ss_pred cccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 129 SRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 129 ~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
.+|..+|+++| +|+. ..|..+.+.+.+.|++++++
T Consensus 164 ~GV~GtPtfvv---ng~~---~~G~~~~e~l~~~i~~~~~~ 198 (205)
T 3gmf_A 164 YNVSGTPSFMI---DGIL---LAGTHDWASLRPQILARLNE 198 (205)
T ss_dssp HCCCSSSEEEE---TTEE---CTTCCSHHHHHHHHHHHHTC
T ss_pred cCCccCCEEEE---CCEE---EeCCCCHHHHHHHHHHHhhc
Confidence 47888999665 5653 56777889999999988764
No 319
>2a4h_A Selenoprotein SEP15; redox, oxidoreductase; NMR {Drosophila melanogaster} SCOP: c.47.1.23
Probab=76.02 E-value=3.7 Score=26.02 Aligned_cols=34 Identities=18% Similarity=0.117 Sum_probs=28.3
Q ss_pred ceEEEECCCCcEEEec-CCCCCchhHHHHHHHHhh
Q 030845 135 FTKFLVDTEGNVIGRY-SPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 135 p~~~lid~~G~i~~~~-~g~~~~~~~~~~l~~ll~ 168 (170)
|.+.++|.+|+++-+. ...++.+++.+.|++-|.
T Consensus 63 P~LvLlD~~Ge~~E~I~IekW~tD~I~efL~ekL~ 97 (126)
T 2a4h_A 63 PVVKLLDASGKVQETLSITKWNTDTVEEFFETHLA 97 (126)
T ss_dssp CEEEECCSSSCCSEEEECSSSSCSHHHHHHHHHSC
T ss_pred CEEEEecCCCCEeeEeccccCCHHHHHHHHHHHhh
Confidence 8889999999988775 467888999999887664
No 320
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=75.27 E-value=0.27 Score=22.65 Aligned_cols=21 Identities=10% Similarity=0.048 Sum_probs=16.8
Q ss_pred CCCCchHhHHHHHHHHHHhcc
Q 030845 43 KCGFTDSNYSQLTDLYNKYKH 63 (170)
Q Consensus 43 ~C~~C~~~~~~l~~~~~~~~~ 63 (170)
.||.|..++|.++.+..-|.+
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHHH
Confidence 599999999988887766543
No 321
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=74.81 E-value=14 Score=26.01 Aligned_cols=34 Identities=9% Similarity=-0.015 Sum_probs=23.6
Q ss_pred ceEEEECCCCcEEEecC-CCCCchhHHHHHHHHhhc
Q 030845 135 FTKFLVDTEGNVIGRYS-PTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 135 p~~~lid~~G~i~~~~~-g~~~~~~~~~~l~~ll~~ 169 (170)
|.++++|.++. .+... +..+++.+.+.++.+++.
T Consensus 195 p~~~~~~~~~~-ky~~~~~~~t~~~i~~Fv~~~~~G 229 (250)
T 3ec3_A 195 VNAAILDESGK-KFAMEPEEFDSDALREFVMAFKKG 229 (250)
T ss_dssp CEEEEECTTSC-EEECCCCSCCHHHHHHHHHHHHTT
T ss_pred cEEEEEcCCCc-eecCCcccCCHHHHHHHHHHHHCC
Confidence 45677776654 44443 567888999999988764
No 322
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=73.17 E-value=2.9 Score=27.90 Aligned_cols=34 Identities=21% Similarity=0.207 Sum_probs=23.3
Q ss_pred cccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 129 SRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 129 ~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
.+|..+|+++| +|+. ..|..+.+.+.+.|++++.
T Consensus 145 ~gv~GtPt~vv---nG~~---~~G~~~~~~l~~~i~~~~~ 178 (186)
T 3bci_A 145 NHIKTTPTAFI---NGEK---VEDPYDYESYEKLLKDKIK 178 (186)
T ss_dssp TTCCSSSEEEE---TTEE---CSCTTCHHHHHHHHHC---
T ss_pred cCCCCCCeEEE---CCEE---cCCCCCHHHHHHHHHHHHH
Confidence 47888999665 6763 3566788889988887764
No 323
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=72.53 E-value=2.2 Score=26.75 Aligned_cols=50 Identities=8% Similarity=0.183 Sum_probs=33.2
Q ss_pred EEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCC
Q 030845 37 IVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAE 98 (170)
Q Consensus 37 l~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~ 98 (170)
..|..++|+.|++...-|.+. +..++++-+.-+ +.+.++++.++ ...+.+
T Consensus 7 ~iY~~p~C~~c~ka~~~L~~~-----gi~~~~~di~~~------~~t~~eL~~~l-~~~g~~ 56 (119)
T 3f0i_A 7 VIYHNPKCSKSRETLALLENQ-----GIAPQVIKYLET------SPSVEELKRLY-QQLGLN 56 (119)
T ss_dssp EEECCTTCHHHHHHHHHHHHT-----TCCCEEECHHHH------CCCHHHHHHHH-HHHTCS
T ss_pred EEEECCCChHHHHHHHHHHHc-----CCceEEEEeccC------cCcHHHHHHHH-HHcCCc
Confidence 345578999999888777652 222455555433 35789999998 466654
No 324
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=69.29 E-value=20 Score=23.06 Aligned_cols=36 Identities=11% Similarity=-0.118 Sum_probs=23.3
Q ss_pred CceEEEECC-CCcEEEecC-CCCCchhHHHHHHHHhhc
Q 030845 134 NFTKFLVDT-EGNVIGRYS-PTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 134 ~p~~~lid~-~G~i~~~~~-g~~~~~~~~~~l~~ll~~ 169 (170)
.|++.+++. .....+... +..+++.+.+.++.+++.
T Consensus 91 ~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~G 128 (147)
T 3bj5_A 91 CPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEG 128 (147)
T ss_dssp CSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTT
T ss_pred CCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcC
Confidence 367677764 222234433 677888899999888753
No 325
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=69.05 E-value=30 Score=25.89 Aligned_cols=34 Identities=3% Similarity=-0.122 Sum_probs=19.0
Q ss_pred CceEEEECCCCcEEEecC---CCCCchhHHHHHHHHhhc
Q 030845 134 NFTKFLVDTEGNVIGRYS---PTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 134 ~p~~~lid~~G~i~~~~~---g~~~~~~~~~~l~~ll~~ 169 (170)
.|.+.+++. ++. +.+. +..+++.+.+.++.+++.
T Consensus 294 ~P~i~i~~~-~~~-y~~~~~~~~~~~~~i~~F~~d~~~G 330 (382)
T 2r2j_A 294 CPVIAIDSF-RHM-YVFGDFKDVLIPGKLKQFVFDLHSG 330 (382)
T ss_dssp CSEEEEECS-SCE-EECCCSGGGGSTTHHHHHHHHHHHT
T ss_pred CCEEEEEcc-hhc-CCCCccccccCHHHHHHHHHHHHCC
Confidence 356566654 332 3331 223567788888888753
No 326
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=67.93 E-value=0.5 Score=22.81 Aligned_cols=20 Identities=15% Similarity=0.406 Sum_probs=14.5
Q ss_pred CCCCchHhHHHHHHHHHHhc
Q 030845 43 KCGFTDSNYSQLTDLYNKYK 62 (170)
Q Consensus 43 ~C~~C~~~~~~l~~~~~~~~ 62 (170)
-||.|.+.+....+|..-|.
T Consensus 7 iCP~C~~~l~s~~~L~~Hye 26 (34)
T 3mjh_B 7 ICPQCMKSLGSADELFKHYE 26 (34)
T ss_dssp ECTTTCCEESSHHHHHHHHH
T ss_pred CCcHHHHHcCCHHHHHHHHH
Confidence 49999888876666666554
No 327
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=67.92 E-value=12 Score=26.23 Aligned_cols=41 Identities=12% Similarity=0.299 Sum_probs=29.1
Q ss_pred CcEEEEEEecCCCCCchHhHHHHHHHHHHhcc-CCeEEEEee
Q 030845 32 GKVLLIVNVASKCGFTDSNYSQLTDLYNKYKH-KGLEILAFP 72 (170)
Q Consensus 32 gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~v~vi~vs 72 (170)
||..|-+|+-.-||.|-.-...|.++.+++.+ .+++|.-.+
T Consensus 1 ~~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~P 42 (239)
T 3gl5_A 1 GHMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRS 42 (239)
T ss_dssp -CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEEE
T ss_pred CCeEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEEE
Confidence 45555545566999999999999999998864 355554444
No 328
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=64.50 E-value=8.1 Score=31.00 Aligned_cols=21 Identities=14% Similarity=0.347 Sum_probs=15.8
Q ss_pred EEEEecCCCCCchHhHHHHHH
Q 030845 36 LIVNVASKCGFTDSNYSQLTD 56 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~ 56 (170)
++.|..+|||+|......|.+
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAE 40 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH
Confidence 455888999999876666664
No 329
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=60.45 E-value=9.6 Score=26.79 Aligned_cols=36 Identities=8% Similarity=-0.044 Sum_probs=25.5
Q ss_pred cccccCceEEEECCCCcEEEecCCCCCchhHHHHHHHHhhc
Q 030845 129 SRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 169 (170)
Q Consensus 129 ~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~~ 169 (170)
.+|..+|+++ | +|+. ...|..+++.+.+.|++++++
T Consensus 179 ~Gv~GvPtfv-v--~g~~--~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 179 LGATGVPFFV-L--DRAY--GVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp TTCCSSSEEE-E--TTTE--EEESSCCHHHHHHHHHHHHHT
T ss_pred CCCCeeCeEE-E--CCcE--eecCCCCHHHHHHHHHHHHhh
Confidence 4788889855 5 4542 235667889999999988753
No 330
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=55.98 E-value=53 Score=23.49 Aligned_cols=136 Identities=13% Similarity=0.078 Sum_probs=68.1
Q ss_pred CcccceEeecCCCCeeecCccC-------CcEEEEEEecCCCCCchH-hHHHHHHHHH---------HhccCCeEEEEee
Q 030845 10 KSIYEFTVKDSKGKDVDLSIYK-------GKVLLIVNVASKCGFTDS-NYSQLTDLYN---------KYKHKGLEILAFP 72 (170)
Q Consensus 10 ~~~p~f~l~~~~G~~v~l~~~~-------gk~~ll~f~~~~C~~C~~-~~~~l~~~~~---------~~~~~~v~vi~vs 72 (170)
..+|=|.++|..|.++-.+.-. ++-+...|+ ++. ....|.++.. ++. .++.|..|+
T Consensus 12 ~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~------s~~dA~~~L~~lk~~~~~np~~~~~~-~~~kV~~vs 84 (252)
T 4ev1_A 12 DSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM------SRQEAQAFINELRNAKNKDPKMQEIV-KSLQVTAVP 84 (252)
T ss_dssp TTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES------CHHHHHHHHHHHHHCSSCCHHHHHHH-TTCEEEEEE
T ss_pred cCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe------cHHHHHHHHHHHHhccccCchhhhhc-cCceEEEee
Confidence 3589999999999997665433 445544444 222 2234444444 222 258999996
Q ss_pred CCCCCCCCCCCHHHHHHHHHHhcCCCCceeEEeecCCCCCchHHHHHhhhcCCccCcccccCceEEEEC----------C
Q 030845 73 CNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVD----------T 142 (170)
Q Consensus 73 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~lid----------~ 142 (170)
+ ..+...+++..+-+-.+....-+.......+...+......+ .++..+|.++.-. .
T Consensus 85 L-----------~~vyql~~~~~~k~~~l~F~fvP~~~qV~~A~~Ll~~~Gq~~--~~f~gVPvF~~~~~~~~~~Lti~~ 151 (252)
T 4ev1_A 85 L-----------GVIYQQLQQTKKDPNRLLFAFKPVDQEIKGAMDLLRQSGQQV--NQFKSVPMFAVRFAPDQGYVPIKV 151 (252)
T ss_dssp H-----------HHHHHHHHHTTTCTTCEEEEEECCHHHHHHHHHHHHTTTCCC--SCCCSCEEEEEESSTTSCBCCEEE
T ss_pred H-----------HHHHHHHHhhccCCcCceEEEcCCHHHHHHHHHHHHHcCCCc--ccCCCccEEEEecCCCCccEEEEe
Confidence 4 455555533222222222222233333444444444332222 2344556765542 1
Q ss_pred C--Cc-EEEecCCCCCchhHHHHHHHHhh
Q 030845 143 E--GN-VIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 143 ~--G~-i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+ |+ ++-. .++.+++...|+++.+
T Consensus 152 ~~~~~~~iPl---FF~KedL~~~l~~~kk 177 (252)
T 4ev1_A 152 GTGNEQVVPL---FLSKQDAQGLLGQVKP 177 (252)
T ss_dssp TTTTEEEEEE---ESSHHHHHHHHHHHTT
T ss_pred CCCCCEEEee---EecHHHHHHHHHHHHH
Confidence 2 22 2222 2366778888777654
No 331
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=54.91 E-value=8.1 Score=26.14 Aligned_cols=35 Identities=14% Similarity=0.089 Sum_probs=26.2
Q ss_pred EEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEe
Q 030845 36 LIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAF 71 (170)
Q Consensus 36 ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~v 71 (170)
|.+|+-.-||.|-...+.|.++.++++ ..+.+..+
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~~-~~v~~~p~ 37 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDYG-LTIRYNAI 37 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHC-CEEEEEEC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcC-CeEEEEee
Confidence 445566799999999999999999985 22444444
No 332
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=54.56 E-value=25 Score=21.93 Aligned_cols=53 Identities=13% Similarity=0.083 Sum_probs=34.4
Q ss_pred cCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCC
Q 030845 30 YKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKA 97 (170)
Q Consensus 30 ~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~ 97 (170)
++|.+++|++-.-. . . ..+.++.+.+...|+.+++|.-. +.+..++.+ ...++
T Consensus 45 F~~aPVVlDl~~l~-~--~---~dl~~L~~~l~~~gl~~vGV~g~--------~~~~~~~~a-~~~GL 97 (120)
T 3ghf_A 45 LKHAPVVINVSGLE-S--P---VNWPELHKIVTSTGLRIIGVSGC--------KDASLKVEI-DRMGL 97 (120)
T ss_dssp HTTCEEEEEEEECC-S--S---CCHHHHHHHHHTTTCEEEEEESC--------CCHHHHHHH-HHHTC
T ss_pred hCCCcEEEEccccC-C--h---HHHHHHHHHHHHcCCEEEEEeCC--------CcHHHHHHH-HHCCC
Confidence 57889999986432 1 1 24666666677789999999743 335466666 34455
No 333
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=54.39 E-value=16 Score=26.47 Aligned_cols=35 Identities=9% Similarity=0.095 Sum_probs=26.0
Q ss_pred ccCceEEEECCCCcEEEecCC-CCCchhHHHHHHHH
Q 030845 132 KWNFTKFLVDTEGNVIGRYSP-TTSPMAIEGDIKNA 166 (170)
Q Consensus 132 ~~~p~~~lid~~G~i~~~~~g-~~~~~~~~~~l~~l 166 (170)
...|+++++++.......+.| ..+.+++.++|.+-
T Consensus 230 ~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~fi~~~ 265 (298)
T 3ed3_A 230 SDKSKLVVFDADKDKFWEYEGNSINKNDISKFLRDT 265 (298)
T ss_dssp CSSCEEEEEETTTTEEEECCCSSCCHHHHHHHHHHH
T ss_pred cCCCeEEEEcCCCCceEEeccccCCHHHHHHHHHhh
Confidence 345899999887666667775 56788888888743
No 334
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=52.70 E-value=37 Score=20.78 Aligned_cols=35 Identities=11% Similarity=0.200 Sum_probs=26.1
Q ss_pred ecCCCCC--c----hHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 40 VASKCGF--T----DSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 40 ~~~~C~~--C----~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
-|-+|+. | -.++-.+....+.++++|+.+--.++.
T Consensus 12 pamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~ 52 (106)
T 3ktb_A 12 PAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNLR 52 (106)
T ss_dssp CSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEETT
T ss_pred hhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 3557762 4 467888888888888888888777765
No 335
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=52.59 E-value=7.5 Score=26.14 Aligned_cols=32 Identities=22% Similarity=0.104 Sum_probs=22.1
Q ss_pred cccccCceEEEECCCCcEEEecCCCCCchhHHHHH
Q 030845 129 SRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDI 163 (170)
Q Consensus 129 ~~v~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (170)
.+|..+|+++ | +|+.+....|..+.+++.+.|
T Consensus 150 ~GV~gtPtf~-i--ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 150 NGIHVSPTFM-I--NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HTCCSSSEEE-E--TTEECTTCCTTSCHHHHHHHH
T ss_pred CCCCccCEEE-E--CCEEccCCCCCCCHHHHHHHh
Confidence 4788899955 4 677664456667777776654
No 336
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=52.12 E-value=8.5 Score=16.78 Aligned_cols=15 Identities=13% Similarity=0.301 Sum_probs=12.7
Q ss_pred eEEEECCCCcEEEec
Q 030845 136 TKFLVDTEGNVIGRY 150 (170)
Q Consensus 136 ~~~lid~~G~i~~~~ 150 (170)
++.|.|++|+++...
T Consensus 6 ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 6 SSKIYDNKNQLIADL 20 (26)
T ss_pred CCEEEeCCCCEeeec
Confidence 458999999999875
No 337
>2kii_A Putative uncharacterized protein; H-NOX, unknown function; HET: HEM; NMR {Shewanella oneidensis} PDB: 2kil_A*
Probab=51.42 E-value=51 Score=21.99 Aligned_cols=53 Identities=6% Similarity=-0.013 Sum_probs=38.2
Q ss_pred CCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEee
Q 030845 8 PQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFP 72 (170)
Q Consensus 8 ~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs 72 (170)
|+..+|.|.+...++. -..+.+.+..| .|.-....|+...+.| +..+.+--+.
T Consensus 111 p~~~~Psf~~~~~~~~----------~l~l~Y~S~R~-l~~~~~Gli~~~A~~f-~~~v~i~~~~ 163 (181)
T 2kii_A 111 HEPSLPHINGQLLPNN----------QIALRYSSPRR-LCFCAEGLLFGAAQHF-QQKIQISHDT 163 (181)
T ss_dssp SCSCCCEEEEEECSSS----------EEEEEEECTTC-CHHHHHHHHHHHHHHT-TCCEEEEEEE
T ss_pred CCCCCCeeEEEECCCC----------EEEEEEecCCC-hHHHHHHHHHHHHHHh-CCCeEEEEEe
Confidence 6677888887665433 34466777777 9999999999999999 4446665443
No 338
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=49.97 E-value=1.1 Score=19.81 Aligned_cols=12 Identities=8% Similarity=0.249 Sum_probs=8.9
Q ss_pred cCCCCCchHhHH
Q 030845 41 ASKCGFTDSNYS 52 (170)
Q Consensus 41 ~~~C~~C~~~~~ 52 (170)
..-||.|+.++|
T Consensus 6 ~vqcpvcqq~mp 17 (29)
T 3vhs_A 6 QVQCPVCQQMMP 17 (29)
T ss_dssp EEECTTTCCEEE
T ss_pred eeeChHHHHhCc
Confidence 356999987765
No 339
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=49.04 E-value=45 Score=20.59 Aligned_cols=26 Identities=15% Similarity=0.193 Sum_probs=20.7
Q ss_pred HhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 49 SNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 49 ~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
.++-.+....+.++++|+.+--.++.
T Consensus 24 ~~L~~~~~~~~~lk~~Gi~V~RyNL~ 49 (110)
T 3kgk_A 24 QALVDFSTDVQWLKQSGVQIERFNLA 49 (110)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEETT
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEccc
Confidence 47778888888888888888887765
No 340
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=48.95 E-value=85 Score=23.77 Aligned_cols=43 Identities=19% Similarity=0.363 Sum_probs=31.6
Q ss_pred hHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHHhcCCCC
Q 030845 48 DSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEY 99 (170)
Q Consensus 48 ~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (170)
.+..|.+.++.+.+++.|+.++-||-. ..+-++.++ ++.++.|
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg--------~~~~v~~ia-~~lg~~y 262 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSAS--------FIDIVRAFA-TDTNNNY 262 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEE--------EHHHHHHHH-HCTTSSC
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCC--------cHHHHHHHH-HHhCccc
Confidence 356788999999999999999999853 355666666 5655544
No 341
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=48.91 E-value=12 Score=25.90 Aligned_cols=35 Identities=6% Similarity=0.028 Sum_probs=25.4
Q ss_pred EEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEe
Q 030845 34 VLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAF 71 (170)
Q Consensus 34 ~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~v 71 (170)
..|.+|+-.-||.|-...+.|.++.+++ ++.|.-.
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~---~~~v~~~ 40 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLW---NIKLKLR 40 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTS---SEEEEEE
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHc---CCeEEEE
Confidence 4455566779999999999999987765 3544443
No 342
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=44.86 E-value=41 Score=19.07 Aligned_cols=43 Identities=12% Similarity=0.206 Sum_probs=27.0
Q ss_pred CCC-CeeecCccCCcEEEEEEecCCCCCchHhHHHHHH-HHHHhcc
Q 030845 20 SKG-KDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTD-LYNKYKH 63 (170)
Q Consensus 20 ~~G-~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~-~~~~~~~ 63 (170)
.|| =.+.+-++++..+.|.+-.+ |..|.+....+++ +.+++++
T Consensus 22 ~dGGGdvelv~v~~g~V~v~l~Ga-C~gc~Tlk~gIe~~L~~~vpe 66 (74)
T 1th5_A 22 GTGGGGLQFLMIKGPIVKVRLTGP-AAVVRTVRIAVSKKLREKIPS 66 (74)
T ss_dssp TTTCCCCCCCEEETTEEEECCCSS-SSSSSSHHHHHHHHHHHHCTT
T ss_pred hcCCCcEEEEEEeCCEEEEEEecC-CcchHHHHHHHHHHHHHHCCC
Confidence 345 55777777777777777755 8889655545555 4444444
No 343
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=43.91 E-value=20 Score=20.31 Aligned_cols=35 Identities=6% Similarity=0.205 Sum_probs=22.8
Q ss_pred ccCCcEEEEE-EecCCCCCc------hHhHHHHHHHHHHhcc
Q 030845 29 IYKGKVLLIV-NVASKCGFT------DSNYSQLTDLYNKYKH 63 (170)
Q Consensus 29 ~~~gk~~ll~-f~~~~C~~C------~~~~~~l~~~~~~~~~ 63 (170)
+++|+.++|. ..+.+|+.| ...+..+.++..+++.
T Consensus 23 ~~~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~~ 64 (78)
T 3ga8_A 23 TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 64 (78)
T ss_dssp EETTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 4588777774 478899988 3455555566665553
No 344
>3tfg_A ALR2278 protein; heme-based sensor domain, GAS binding, signaling protein; HET: HEM; 1.90A {Nostoc SP} PDB: 3tfd_A* 3tfe_A* 3tff_A* 2o09_A* 2o0c_A* 2o0g_A* 3l6j_A* 3tf8_A* 3tf9_A* 3tfa_A*
Probab=42.68 E-value=57 Score=21.95 Aligned_cols=54 Identities=19% Similarity=0.345 Sum_probs=38.6
Q ss_pred CCCcccceEeecCCCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEee
Q 030845 8 PQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFP 72 (170)
Q Consensus 8 ~~~~~p~f~l~~~~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs 72 (170)
|+..+|.|.+...+. .-..+.+.+.-|+.|.-....|+...+.|... +.|--+.
T Consensus 113 p~~~~Psf~~~~~~~----------~~l~l~Y~S~R~gl~~~~~Gli~~~A~~f~~~-v~i~~~~ 166 (189)
T 3tfg_A 113 PQLRPPAFECQHTSS----------KSMELHYQSTRCGLAPMVLGLLHGLGKRFQTK-VEVTQTA 166 (189)
T ss_dssp TTCCCCEEEEEEEET----------TEEEEEEECSSSSCHHHHHHHHHHHHHHTTCE-EEEEEEE
T ss_pred CCCCCCeEEEEECCC----------CEEEEEEECCCCCHHHHHHHHHHHHHHHhCCC-eEEEEEe
Confidence 566777777765432 34566777888899999999999999988654 5555443
No 345
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=41.50 E-value=28 Score=22.14 Aligned_cols=31 Identities=10% Similarity=0.046 Sum_probs=23.1
Q ss_pred ceEEEECCCCcEEEec-CCCCCchhHHHHHHH
Q 030845 135 FTKFLVDTEGNVIGRY-SPTTSPMAIEGDIKN 165 (170)
Q Consensus 135 p~~~lid~~G~i~~~~-~g~~~~~~~~~~l~~ 165 (170)
|.+.++|.+|+.+-+. .-.++.+++.+.|.+
T Consensus 57 P~LvL~D~~G~e~E~I~Iekw~~d~I~efL~e 88 (129)
T 2a2p_A 57 PELVLLSRNYQELERIPLSQMTRDEINALVQE 88 (129)
T ss_dssp CEEEEECSSSCCCEEEECSSSCHHHHHHHHHH
T ss_pred CEEEEecCCCCEEEEeecccCCHHHHHHHHHH
Confidence 7889999999987665 445666777776654
No 346
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=41.00 E-value=42 Score=21.71 Aligned_cols=34 Identities=12% Similarity=0.038 Sum_probs=23.6
Q ss_pred CceEEEECCCCcEEEec----CCCCCchhHHHHHHHHhh
Q 030845 134 NFTKFLVDTEGNVIGRY----SPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 134 ~p~~~lid~~G~i~~~~----~g~~~~~~~~~~l~~ll~ 168 (170)
.|++-|+ ++|+++... .-..+++.+.+.|..+.+
T Consensus 107 SPS~ALf-KdGelVh~ieRh~IEGr~a~~Ia~~L~~afd 144 (147)
T 3fhk_A 107 SPSMALL-KGKEVVHFIPRHEIEGHDMEEIMKNLTAAFD 144 (147)
T ss_dssp SSEEEEE-ETTEEEEEECGGGTTTSCHHHHHHHHHHHHH
T ss_pred Cchheee-eCCEEEEEeehhhcCCCCHHHHHHHHHHHHH
Confidence 4676666 899999764 223367778888877664
No 347
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=40.64 E-value=89 Score=21.66 Aligned_cols=36 Identities=3% Similarity=-0.018 Sum_probs=25.8
Q ss_pred CcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEe
Q 030845 32 GKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAF 71 (170)
Q Consensus 32 gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~v 71 (170)
.++++|-|+..| |......+.++.+.+++. +.+..+
T Consensus 24 ~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~-~~F~~~ 59 (252)
T 2h8l_A 24 KDASIVGFFDDS---FSEAHSEFLKAASNLRDN-YRFAHT 59 (252)
T ss_dssp SSCEEEEEESCT---TSHHHHHHHHHHHHTTTT-SCEEEE
T ss_pred CCeEEEEEECCC---CChHHHHHHHHHHhcccC-cEEEEE
Confidence 457778788777 446778888888888654 666555
No 348
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=40.11 E-value=64 Score=20.11 Aligned_cols=33 Identities=21% Similarity=0.159 Sum_probs=25.1
Q ss_pred ceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 135 FTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 135 p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+.+.|.+.+|+|+++..+-.+.....+-|+.+.
T Consensus 66 ~yF~Lka~NgqvIg~Se~Y~s~~~~~~gI~sVk 98 (118)
T 2k49_A 66 PYFNLKAANHQIIGTSQMYSSTAARDNGIKSVM 98 (118)
T ss_dssp EEEEEECTTCCEEEEBCCCSSHHHHHHHHHHHH
T ss_pred EEEEEEcCCCcEEEEcCCcCCHHHHHHHHHHHH
Confidence 467899999999998766556666777776654
No 349
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=38.57 E-value=60 Score=19.07 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=21.9
Q ss_pred CCCeeecCccCCcEEEEEEecCCCCCchHhHHHHH
Q 030845 21 KGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLT 55 (170)
Q Consensus 21 ~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~ 55 (170)
||=.+.+-++++..+.|.|-+ .|..|+...-.|+
T Consensus 26 dGGdvelv~v~~g~V~V~L~G-aC~gCpss~~TLk 59 (88)
T 1xhj_A 26 DGGDCTLVDVEDGIVKLQLHG-ACGTCPSSTITLK 59 (88)
T ss_dssp HSCEEEEEECCSSEEEEEEES-SCCSSCHHHHHHH
T ss_pred cCCeEEEEEEECCEEEEEEee-cCCCCcchHHHHH
Confidence 455677777777777777764 4666666555555
No 350
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=38.10 E-value=99 Score=21.44 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=25.0
Q ss_pred CcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEe
Q 030845 32 GKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAF 71 (170)
Q Consensus 32 gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~v 71 (170)
.++++|-|+.++| ......+.++.+++++. +.+..+
T Consensus 25 ~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~-~~F~~t 60 (250)
T 3ec3_A 25 DDVVILGVFQGVG---DPGYLQYQDAANTLRED-YKFHHT 60 (250)
T ss_dssp SSCEEEEECSCTT---CHHHHHHHHHHHHHTTT-CCEEEE
T ss_pred CCeEEEEEEcCCC---chHHHHHHHHHHhhhcC-cEEEEE
Confidence 4677777887764 47777888888887654 665554
No 351
>3v67_A Sensor protein CPXA; PAS fold, signal sensing, signaling protein, merohedral twin; 2.30A {Vibrio parahaemolyticus}
Probab=36.57 E-value=42 Score=21.54 Aligned_cols=16 Identities=31% Similarity=0.387 Sum_probs=13.8
Q ss_pred ceEEEECCCCcEEEec
Q 030845 135 FTKFLVDTEGNVIGRY 150 (170)
Q Consensus 135 p~~~lid~~G~i~~~~ 150 (170)
|.+||+|.+|+|+...
T Consensus 56 ~r~~l~d~eG~Il~~~ 71 (138)
T 3v67_A 56 PRVFFSDYNGNVLTTD 71 (138)
T ss_dssp CEEEEECTTSCEECCC
T ss_pred ccEEEEcCCCCEecCC
Confidence 5789999999999864
No 352
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=35.90 E-value=56 Score=17.92 Aligned_cols=32 Identities=13% Similarity=-0.030 Sum_probs=24.5
Q ss_pred eEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 136 TKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 136 ~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
.+-|...+|+++....|-.+.....+.|+.+.
T Consensus 14 rfrLka~NGevI~sSe~Y~sk~~a~~gI~sVk 45 (64)
T 3bid_A 14 RWRLKAANHEIIAQGEGYTSKQNCQHAVDLLK 45 (64)
T ss_dssp EEEEECTTSCEEEECCCBSCHHHHHHHHHHHH
T ss_pred EEEEEeCCCCEEEECCCcCCHHHHHHHHHHHH
Confidence 56799999999997776666677777776654
No 353
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=34.63 E-value=73 Score=18.90 Aligned_cols=49 Identities=12% Similarity=0.116 Sum_probs=23.0
Q ss_pred EecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHH
Q 030845 39 NVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFAC 92 (170)
Q Consensus 39 f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~~ 92 (170)
+.+++||.-......+++...++. |+.-+.|.+. ...+|+.+.+...++
T Consensus 50 lt~~~cp~~~~l~~~i~~al~~l~--gv~~v~V~l~---~~p~W~~~~~s~~~r 98 (103)
T 1uwd_A 50 MTTPMCPLAGMILSDAEEAIKKIE--GVNNVEVELT---FDPPWTPERMSPELR 98 (103)
T ss_dssp CSSSCCSSHHHHHHHHHHHHHTSS--SCCEEEEEEC---CSSCCCGGGSCHHHH
T ss_pred ECCCCCcHHHHHHHHHHHHHHhCC--CcceEEEEEe---cCCCCChHHCCHHHH
Confidence 345677754444444444433332 4443444332 233566665555543
No 354
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=33.76 E-value=59 Score=19.61 Aligned_cols=15 Identities=27% Similarity=0.441 Sum_probs=13.1
Q ss_pred eEEEECCCCcEEEec
Q 030845 136 TKFLVDTEGNVIGRY 150 (170)
Q Consensus 136 ~~~lid~~G~i~~~~ 150 (170)
.+.|||++|+|++-.
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 568999999999875
No 355
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=32.44 E-value=28 Score=27.61 Aligned_cols=22 Identities=14% Similarity=-0.049 Sum_probs=18.4
Q ss_pred cccccCceEEEECCCCcEEEec
Q 030845 129 SRIKWNFTKFLVDTEGNVIGRY 150 (170)
Q Consensus 129 ~~v~~~p~~~lid~~G~i~~~~ 150 (170)
++|...|+.++++++|++....
T Consensus 201 fgV~~~Pslvl~~~nGk~~~~~ 222 (519)
T 3t58_A 201 FGVTDFPSCYLLLRNGSVSRVP 222 (519)
T ss_dssp HTCCCSSEEEEEETTSCEEECC
T ss_pred cCCCCCCeEEEEeCCCceeecc
Confidence 4788899999999999976543
No 356
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=31.79 E-value=44 Score=20.16 Aligned_cols=28 Identities=25% Similarity=0.180 Sum_probs=20.1
Q ss_pred ceEEEECCCCcEEEecCCCCCchhHHHHHHHH
Q 030845 135 FTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNA 166 (170)
Q Consensus 135 p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~l 166 (170)
+...++|.+|++++.. +..++.+.+.++
T Consensus 100 ~~lpVvd~~g~~~Gii----t~~dll~~l~~~ 127 (128)
T 3gby_A 100 SVVPLADEDGRYEGVV----SRKRILGFLAER 127 (128)
T ss_dssp SEEEEECTTCBEEEEE----EHHHHHHHHHTT
T ss_pred cEEEEECCCCCEEEEE----EHHHHHHHHHhh
Confidence 3567999999988875 566666666544
No 357
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=31.18 E-value=15 Score=29.43 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=28.6
Q ss_pred CCCCCcccceEeecCCCCeeecCcc--CCcEEEEEEec
Q 030845 6 SVPQKSIYEFTVKDSKGKDVDLSIY--KGKVLLIVNVA 41 (170)
Q Consensus 6 ~~~~~~~p~f~l~~~~G~~v~l~~~--~gk~~ll~f~~ 41 (170)
..+|..+|++.|.+.+|.+..|.++ .|+.+||.|-.
T Consensus 445 ~~~G~r~pd~~l~~~~g~~~~l~~~l~~~~~~ll~~~~ 482 (570)
T 3fmw_A 445 PWPGRFAGGLVLSRPSGEPVPVAELLRSARPLLLDLAG 482 (570)
T ss_dssp SSTTCBCTTCEECCSTTCCEEHHHHSTTCCCEEECSSC
T ss_pred ccccCcCCCceeecCCCcceeHHHHhcCCeEEEEEecC
Confidence 4578899999998888886777764 46899998763
No 358
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=30.66 E-value=30 Score=23.31 Aligned_cols=38 Identities=5% Similarity=-0.019 Sum_probs=26.9
Q ss_pred EEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCC
Q 030845 37 IVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQ 75 (170)
Q Consensus 37 l~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~ 75 (170)
-+|+-.-||.|-.-.+.|.++.+++. ..|++..+.+++
T Consensus 8 ~~~~D~~cPwcyi~~~~l~~~~~~~~-~~v~~~p~~L~~ 45 (202)
T 3fz5_A 8 EFWFDFSSGYAFFAAQRIEALAAELG-RTVLWRPYMLGA 45 (202)
T ss_dssp EEEECTTCHHHHHHHTTHHHHHHHHT-CCEEEEECTTC-
T ss_pred EEEEeCCCHHHHHHHHHHHHHHHHhC-CeEEEEeeeccc
Confidence 33446699999999999999998874 236666555543
No 359
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=30.25 E-value=45 Score=20.61 Aligned_cols=13 Identities=15% Similarity=0.189 Sum_probs=6.7
Q ss_pred HHHHHHHHHHhcCC
Q 030845 84 SQEAHEFACTRYKA 97 (170)
Q Consensus 84 ~~~~~~~~~~~~~~ 97 (170)
...+++.+ .+.+.
T Consensus 96 ~~~l~~~l-~~~G~ 108 (138)
T 5nul_A 96 MRDFEERM-NGYGC 108 (138)
T ss_dssp HHHHHHHH-HHTTC
T ss_pred HHHHHHHH-HHCCC
Confidence 45566666 34444
No 360
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=29.96 E-value=69 Score=17.33 Aligned_cols=33 Identities=6% Similarity=-0.108 Sum_probs=21.1
Q ss_pred ceEEEECCCCcEEEecCC----CCCchhHHHHHHHHh
Q 030845 135 FTKFLVDTEGNVIGRYSP----TTSPMAIEGDIKNAL 167 (170)
Q Consensus 135 p~~~lid~~G~i~~~~~g----~~~~~~~~~~l~~ll 167 (170)
|.++-|+++|.+..-..+ ..+.+++...|.++.
T Consensus 4 ~i~v~I~~dG~~~~~~~~~~~~~v~~~~L~~~l~~~~ 40 (74)
T 2jwk_A 4 PVILEVAGIGKYAISIGGERQEGLTEEMVTQLSRQEF 40 (74)
T ss_dssp CEEEEECSSSCEEEEETTEEEEEECHHHHHHHHHHHH
T ss_pred CEEEEEecCccEEEecCCCcCcccCHHHHHHHHHHHH
Confidence 456789999987654212 235567777776654
No 361
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=29.25 E-value=94 Score=18.52 Aligned_cols=34 Identities=12% Similarity=-0.025 Sum_probs=27.8
Q ss_pred ceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 135 FTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 135 p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
|.++....+|..+..-....+.+++.+.|+.+.+
T Consensus 66 P~i~a~Y~~G~ek~i~l~n~s~~eI~~~l~~l~~ 99 (102)
T 1s3a_A 66 PKLWARYAFGQETNVPLNNFSADQVTRALENVLS 99 (102)
T ss_dssp CEEEEEESSCCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 7777888889877776667788999999998875
No 362
>2hz5_A Dynein light chain 2A, cytoplasmic; DNLC2A, transport protein; 2.10A {Homo sapiens} SCOP: d.110.7.1 PDB: 2b95_A
Probab=27.92 E-value=41 Score=20.56 Aligned_cols=15 Identities=33% Similarity=0.315 Sum_probs=12.3
Q ss_pred eEEEECCCCcEEEec
Q 030845 136 TKFLVDTEGNVIGRY 150 (170)
Q Consensus 136 ~~~lid~~G~i~~~~ 150 (170)
.++|+|.+|.++...
T Consensus 29 G~iIln~~G~pIrSt 43 (106)
T 2hz5_A 29 GIIVVNTEGIPIKST 43 (106)
T ss_dssp EEEEECTTCCEEEES
T ss_pred EEEEEcCCCCeEEEe
Confidence 568999999988764
No 363
>2ijr_A Hypothetical protein API92; structural genomics, PSI, protein structure initiative; 2.70A {Yersinia pseudotuberculosis} SCOP: e.66.1.1
Probab=27.37 E-value=45 Score=24.27 Aligned_cols=39 Identities=8% Similarity=0.071 Sum_probs=29.1
Q ss_pred CCCeeecCccCCcEEEEEEecCCCCCchHhHHHHHHHHH
Q 030845 21 KGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYN 59 (170)
Q Consensus 21 ~G~~v~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~~~~ 59 (170)
.|..++...-...-+-|.|=.+|||+....+..|++.+.
T Consensus 208 ~Gh~~~~~r~g~~~L~v~FDTPW~PPs~ev~~~lS~~f~ 246 (300)
T 2ijr_A 208 SGQNIIWQRDRINSLRLDFDSPSYPPSAELMGELSAVFD 246 (300)
T ss_dssp SCEEEEEEEEETTEEEEEEEEESSCCCHHHHHHHHHHTT
T ss_pred CCCceeEEeCCCCeEEEeccCCCCCChHHHHHHHhccCC
Confidence 455555555445677888999999999888888887643
No 364
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=27.21 E-value=78 Score=22.39 Aligned_cols=23 Identities=17% Similarity=0.418 Sum_probs=11.4
Q ss_pred HHHHHHHHHhccCCeEEEEeeCC
Q 030845 52 SQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 52 ~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
..++++.+++++.|.+++.+..|
T Consensus 42 ~~~~~~~~~i~~~g~~~~~~~~D 64 (254)
T 4fn4_A 42 DRLNQIVQELRGMGKEVLGVKAD 64 (254)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHHHhcCCcEEEEEcc
Confidence 34445555554444455555554
No 365
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=26.74 E-value=1.2e+02 Score=19.27 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=23.9
Q ss_pred ceEEEECCCCcEEEecCCCCCchhHHHHHHHHh
Q 030845 135 FTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 167 (170)
Q Consensus 135 p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 167 (170)
+.+.|.+.+|+|+....+-.+.....+-|+.+.
T Consensus 82 ~~f~Lka~NgqvIa~Se~Y~ska~a~~gI~sVk 114 (130)
T 2k8e_A 82 FYFNLKAANHQIIGSSQMYATAQSRETGIASVK 114 (130)
T ss_dssp EEEEEECTTSCEEEECCCBSSHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHH
Confidence 356799999999998766555566666666554
No 366
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=26.62 E-value=74 Score=19.09 Aligned_cols=30 Identities=27% Similarity=0.254 Sum_probs=20.6
Q ss_pred ceEEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 135 FTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 135 p~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
+...++|.+|++++.. +..++.+.+.+.+.
T Consensus 99 ~~l~Vvd~~g~~~Gii----t~~dll~~~~~~~~ 128 (133)
T 2ef7_A 99 RHLPVVDDKGNLKGII----SIRDITRAIDDMFE 128 (133)
T ss_dssp SEEEEECTTSCEEEEE----EHHHHHHHHHHHC-
T ss_pred CEEEEECCCCeEEEEE----EHHHHHHHHHHHHH
Confidence 3567899999888765 56667766665543
No 367
>3hug_B Probable conserved membrane protein; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=26.29 E-value=14 Score=22.75 Aligned_cols=23 Identities=9% Similarity=0.096 Sum_probs=19.9
Q ss_pred CCCCCchHhHHHHHHHHHHhccC
Q 030845 42 SKCGFTDSNYSQLTDLYNKYKHK 64 (170)
Q Consensus 42 ~~C~~C~~~~~~l~~~~~~~~~~ 64 (170)
..|+.|..++..|+++...+..-
T Consensus 52 a~Cp~CR~ev~eL~~~~a~L~~l 74 (108)
T 3hug_B 52 AGCPECRGAVTELCGVPALLSQL 74 (108)
T ss_dssp HTCHHHHHHHHHHTTHHHHHTTS
T ss_pred HhCHHHHHHHHHHHHHHHHHhcC
Confidence 37999999999999999888763
No 368
>1yd6_A UVRC; DNA binding protein; 2.00A {Bacillus caldotenax}
Probab=25.78 E-value=92 Score=18.60 Aligned_cols=21 Identities=19% Similarity=0.079 Sum_probs=13.9
Q ss_pred ccccCceEE-EECCCCcEEEec
Q 030845 130 RIKWNFTKF-LVDTEGNVIGRY 150 (170)
Q Consensus 130 ~v~~~p~~~-lid~~G~i~~~~ 150 (170)
.++..|.+| +.|.+|++++..
T Consensus 11 ~lP~~pGVY~~~d~~g~vlYVG 32 (99)
T 1yd6_A 11 VLPEQPGCYLMKDKHGTVIYVG 32 (99)
T ss_dssp TCCSSCEEEEEECSSCCEEEEE
T ss_pred hCCCCCeEEEEEcCCCCEEEEe
Confidence 344455555 557799998865
No 369
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=24.56 E-value=1.6e+02 Score=19.75 Aligned_cols=61 Identities=11% Similarity=0.104 Sum_probs=35.2
Q ss_pred CCcccce-EeecCCCCeeecCcc----CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 9 QKSIYEF-TVKDSKGKDVDLSIY----KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 9 ~~~~p~f-~l~~~~G~~v~l~~~----~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
+.+..++ .+.+.+|..+....+ .++++||.+.+..+.. . .+..+.+.+.+.|+.++.+..-
T Consensus 13 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~--~---~~~~~~~~l~~~g~~v~~~d~~ 78 (303)
T 3pe6_A 13 SIPYQDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHS--G---RYEELARMLMGLDLLVFAHDHV 78 (303)
T ss_dssp SCBGGGSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCG--G---GGHHHHHHHHHTTEEEEEECCT
T ss_pred CcccCCCCeEecCCCeEEEEEEeccCCCCCeEEEEECCCCchh--h---HHHHHHHHHHhCCCcEEEeCCC
Confidence 3344555 677889988765443 3367777665443221 1 2233444445567889888763
No 370
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=23.44 E-value=26 Score=23.82 Aligned_cols=21 Identities=14% Similarity=0.113 Sum_probs=17.7
Q ss_pred CCCCCchHhHHHHHHHHHHhc
Q 030845 42 SKCGFTDSNYSQLTDLYNKYK 62 (170)
Q Consensus 42 ~~C~~C~~~~~~l~~~~~~~~ 62 (170)
..|+.|+.++.+++++...+-
T Consensus 33 ~~C~~Cr~~v~~l~~~~~~l~ 53 (195)
T 2q1z_B 33 SLCDECRARAGALDAVGGSLM 53 (195)
T ss_dssp HHCHHHHHHHHHHHHHHHHHH
T ss_pred hHCHHHHHHHHHHHHHHHHHh
Confidence 369999999999999886664
No 371
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=23.39 E-value=2e+02 Score=20.19 Aligned_cols=59 Identities=12% Similarity=0.117 Sum_probs=34.9
Q ss_pred cccce-EeecCCCCeeecCcc----CCcEEEEEEecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCC
Q 030845 11 SIYEF-TVKDSKGKDVDLSIY----KGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCN 74 (170)
Q Consensus 11 ~~p~f-~l~~~~G~~v~l~~~----~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d 74 (170)
+..++ .+.+.+|..+....+ .++++||.+-+..+.. . .+..+.+.+.+.|+.++.+..-
T Consensus 33 ~~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~-~----~~~~~~~~l~~~g~~vi~~D~~ 96 (342)
T 3hju_A 33 PYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHS-G----RYEELARMLMGLDLLVFAHDHV 96 (342)
T ss_dssp BTTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCG-G----GGHHHHHHHHTTTEEEEEECCT
T ss_pred ccccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCccc-c----hHHHHHHHHHhCCCeEEEEcCC
Confidence 34455 677788887665443 3467777665443321 1 2334455556668999988654
No 372
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=22.66 E-value=83 Score=20.00 Aligned_cols=28 Identities=25% Similarity=0.226 Sum_probs=21.6
Q ss_pred EEEECCCCcEEEecCCCCCchhHHHHHHHHhh
Q 030845 137 KFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 137 ~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll~ 168 (170)
..++|.+|++++.. +..++.+.+..++.
T Consensus 118 lpVVd~~g~l~Gii----T~~Dil~~~~~~~~ 145 (156)
T 3k6e_A 118 LPVVDAEGIFQGII----TRKSILKAVNALLH 145 (156)
T ss_dssp EEEECTTSBEEEEE----EHHHHHHHHHHHSC
T ss_pred eEEEecCCEEEEEE----EHHHHHHHHHHHhc
Confidence 46899999998875 67778887776654
No 373
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=22.31 E-value=64 Score=20.17 Aligned_cols=15 Identities=13% Similarity=0.357 Sum_probs=13.1
Q ss_pred eEEEECCCCcEEEec
Q 030845 136 TKFLVDTEGNVIGRY 150 (170)
Q Consensus 136 ~~~lid~~G~i~~~~ 150 (170)
++.|+|++|+.++.+
T Consensus 101 ~t~L~n~~Gee~A~~ 115 (123)
T 3hn9_A 101 KVILKNSQGEEVAQR 115 (123)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEECCCCCEEEEE
Confidence 578999999999875
No 374
>2j58_A WZA, outer membrane lipoprotein WZA; membrane protein; 2.26A {Escherichia coli} PDB: 2w8i_A 2w8h_A*
Probab=22.16 E-value=61 Score=24.37 Aligned_cols=32 Identities=19% Similarity=0.296 Sum_probs=25.4
Q ss_pred EEECCCCcEEEecCC-----CCCchhHHHHHHHHhhc
Q 030845 138 FLVDTEGNVIGRYSP-----TTSPMAIEGDIKNALGD 169 (170)
Q Consensus 138 ~lid~~G~i~~~~~g-----~~~~~~~~~~l~~ll~~ 169 (170)
+.||++|.|-.-+.| ..+.+++++.|.+.+++
T Consensus 98 ~~V~~dG~I~~P~iG~v~vaG~T~~e~~~~I~~~L~~ 134 (359)
T 2j58_A 98 NWVNSDGTIFYPYIGKVQVAGKTVSQVRQDITSRLTT 134 (359)
T ss_dssp EECCTTSEEEETTTEEEECTTCCHHHHHHHHHHHHTT
T ss_pred cEECCCCeEEecccceEEECCCCHHHHHHHHHHHHHH
Confidence 789999999877644 56788899988877654
No 375
>3vk8_A Probable formamidopyrimidine-DNA glycosylase; DNA glycosylase, hneil1 ortholog, DNA lesion, thymine glycol zincless finger; HET: DNA CTG; 2.00A {Acanthamoeba polyphaga mimivirus} PDB: 3vk7_A* 3a42_A 3a46_A* 3a45_A*
Probab=21.84 E-value=17 Score=26.63 Aligned_cols=10 Identities=0% Similarity=-0.356 Sum_probs=6.6
Q ss_pred cCCCCCchHh
Q 030845 41 ASKCGFTDSN 50 (170)
Q Consensus 41 ~~~C~~C~~~ 50 (170)
..|||.|++.
T Consensus 279 t~~CP~CQ~~ 288 (295)
T 3vk8_A 279 TYWAPAIQKL 288 (295)
T ss_dssp EEECTTTCBC
T ss_pred cEECCCCCCC
Confidence 3388888653
No 376
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=21.73 E-value=1.4e+02 Score=22.22 Aligned_cols=34 Identities=12% Similarity=0.016 Sum_probs=27.2
Q ss_pred ceEEEECCCCcEEEe-cCCCCCchhHHHHHHHHhh
Q 030845 135 FTKFLVDTEGNVIGR-YSPTTSPMAIEGDIKNALG 168 (170)
Q Consensus 135 p~~~lid~~G~i~~~-~~g~~~~~~~~~~l~~ll~ 168 (170)
|.++++|.+|+.+-. ..|..-..++.+.|.+++.
T Consensus 82 PaVvvvDe~G~~vIpLLsGH~GAN~LA~~IA~~lg 116 (336)
T 3eeq_A 82 PAIVCIDDKINYVIPLLGGHWGANDIARELSVILN 116 (336)
T ss_dssp CEEEEECTTCCEEEEEECTTTTHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCCEEEEeccCchhHHHHHHHHHHHhC
Confidence 899999999996655 4666677789998888764
No 377
>3bqa_A Sensor protein PHOQ; histidine kinase sensor domain, ATP-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding; 2.00A {Escherichia coli} PDB: 3bq8_A 1yax_A
Probab=20.74 E-value=73 Score=20.56 Aligned_cols=25 Identities=12% Similarity=0.102 Sum_probs=16.8
Q ss_pred eEEEECCCCcEEEecCCCCCchhHHHHH
Q 030845 136 TKFLVDTEGNVIGRYSPTTSPMAIEGDI 163 (170)
Q Consensus 136 ~~~lid~~G~i~~~~~g~~~~~~~~~~l 163 (170)
-++|.|.+|+++++-. ...++++.|
T Consensus 43 LvlIYDe~G~lLW~qr---~vP~le~~I 67 (148)
T 3bqa_A 43 MTLIYDENGQLLWAQR---DVPWLMKMI 67 (148)
T ss_dssp EEEEECTTSCEEEESS---CCHHHHHHS
T ss_pred EEEEEcCCCcEEEecC---cchHHHhhc
Confidence 3578899999999854 223355544
No 378
>2gx5_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, GAF domain; HET: PG4 P6G PCG PGE; 1.74A {Bacillus subtilis} PDB: 2b18_A 2hgv_A*
Probab=20.66 E-value=1.5e+02 Score=19.78 Aligned_cols=15 Identities=27% Similarity=0.583 Sum_probs=12.9
Q ss_pred eEEEECCCCcEEEec
Q 030845 136 TKFLVDTEGNVIGRY 150 (170)
Q Consensus 136 ~~~lid~~G~i~~~~ 150 (170)
.+||++++|++++..
T Consensus 48 NvyIvs~~GkiLG~~ 62 (170)
T 2gx5_A 48 NIFVVSRRGKLLGYS 62 (170)
T ss_dssp EEEEEETTSBEEEEE
T ss_pred CEEEEcCCCCEEEEe
Confidence 469999999999875
No 379
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=20.58 E-value=1.6e+02 Score=18.12 Aligned_cols=23 Identities=17% Similarity=0.465 Sum_probs=12.1
Q ss_pred cEEEEEEec----CCCCCchHhHHHHH
Q 030845 33 KVLLIVNVA----SKCGFTDSNYSQLT 55 (170)
Q Consensus 33 k~~ll~f~~----~~C~~C~~~~~~l~ 55 (170)
.+|+|+.=+ +.||+|.+....|.
T Consensus 20 ~~VvvF~Kgt~~~P~C~fc~~ak~lL~ 46 (118)
T 2wul_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILR 46 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCCHHHHHHHHHHH
Confidence 355554333 35777765555443
No 380
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=20.03 E-value=78 Score=18.79 Aligned_cols=48 Identities=19% Similarity=0.191 Sum_probs=22.7
Q ss_pred EecCCCCCchHhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHH
Q 030845 39 NVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFA 91 (170)
Q Consensus 39 f~~~~C~~C~~~~~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~~~~ 91 (170)
+.+++||.-......+++...++. |+.-+.|.+. ...+|+++.+.+.+
T Consensus 49 lt~~~cp~~~~l~~~i~~al~~l~--gv~~V~V~l~---~~p~W~~~~~s~~~ 96 (103)
T 3cq1_A 49 LTTPGCPLHDSLGEAVRQALSRLP--GVEEVEVEVT---FEPPWTLARLSEKA 96 (103)
T ss_dssp CSSSSCCSSCHHHHHHHHHHHTST--TCCEEEEEEC---CSSCCCGGGCCSGG
T ss_pred ECCCCCcHHHHHHHHHHHHHHhCC--CceeEEEEEe---cCCCCChHHCCHHH
Confidence 345677765455555555444433 4443444332 22356655444433
Done!