BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030848
(170 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q63055|ARFRP_RAT ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus
GN=Arfrp1 PE=2 SV=1
Length = 201
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 117/173 (67%), Gaps = 3/173 (1%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYS-NVEGLPPDRIVPTVGLN 59
M++L GL+KY+F K E+ +LILG+D AGKTT LE+ K+ ++ N +G+ +I TVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLR 119
IG ++V ++L+FWDLGGQ L+S+W+KYY E H V++VID+ R +SK A EKV+
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVS 120
Query: 120 NEDLQGAPLLILANKQDLPDAVSADEL-ARYLDLK-KLDERVCMFEAVSGYDG 170
+E L G P+L+LANKQD+ +S ++ + D K+ R C+ +A S G
Sbjct: 121 SEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCKIGRRDCLTQACSALTG 173
>sp|Q8BXL7|ARFRP_MOUSE ADP-ribosylation factor-related protein 1 OS=Mus musculus GN=Arfrp1
PE=2 SV=2
Length = 201
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 117/173 (67%), Gaps = 3/173 (1%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYS-NVEGLPPDRIVPTVGLN 59
M++L GL+KY+F K E+ +LILG+D AGKTT LE+ K+ ++ N +G+ +I TVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLR 119
IG ++V ++L+FWDLGGQ L+S+W+KYY E H V++VID+ R +SK A EKV+
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVS 120
Query: 120 NEDLQGAPLLILANKQDLPDAVSADEL-ARYLDLK-KLDERVCMFEAVSGYDG 170
+E L G P+L+LANKQD+ +S ++ + D K+ R C+ +A S G
Sbjct: 121 SEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCKIGRRDCLTQACSALTG 173
>sp|Q32LJ2|ARFRP_BOVIN ADP-ribosylation factor-related protein 1 OS=Bos taurus GN=ARFRP1
PE=2 SV=1
Length = 201
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 115/173 (66%), Gaps = 3/173 (1%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYS-NVEGLPPDRIVPTVGLN 59
M++L GL+KY+F K E+ VLILG+D AGKTT LE+ K+ ++ N +G+ +I TVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCVLILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLR 119
IG ++V ++L+FWDLGGQ L+S+W+KYY E H V++VID+ R +SK A EK++
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKQAFEKMVT 120
Query: 120 NEDLQGAPLLILANKQDLPDAVSADELARYLD--LKKLDERVCMFEAVSGYDG 170
+E L G P+L+LANKQD+ +S ++ K+ R C+ +A S G
Sbjct: 121 SEALDGVPILVLANKQDVETCLSIPDIKTAFSDCASKIGRRDCLTQACSALTG 173
>sp|Q5R579|ARFRP_PONAB ADP-ribosylation factor-related protein 1 OS=Pongo abelii GN=ARFRP1
PE=2 SV=1
Length = 201
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 115/173 (66%), Gaps = 3/173 (1%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYS-NVEGLPPDRIVPTVGLN 59
M++L GL+KY+F K E+ +LILG+D AGKTT LE+ K+ ++ N +G+ +I TVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLR 119
IG ++V ++L+FWDLGGQ L+S+W+KYY E H V++VID+ R +SK A EKV+
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT 120
Query: 120 NEDLQGAPLLILANKQDLPDAVSADELARYLD--LKKLDERVCMFEAVSGYDG 170
+E L G P+L+LANKQD+ +S ++ K+ R C+ +A S G
Sbjct: 121 SEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
>sp|Q13795|ARFRP_HUMAN ADP-ribosylation factor-related protein 1 OS=Homo sapiens GN=ARFRP1
PE=1 SV=1
Length = 201
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 115/173 (66%), Gaps = 3/173 (1%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYS-NVEGLPPDRIVPTVGLN 59
M++L GL+KY+F K E+ +LILG+D AGKTT LE+ K+ ++ N +G+ +I TVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLR 119
IG ++V ++L+FWDLGGQ L+S+W+KYY E H V++VID+ R +SK A EKV+
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT 120
Query: 120 NEDLQGAPLLILANKQDLPDAVSADELARYLD--LKKLDERVCMFEAVSGYDG 170
+E L G P+L+LANKQD+ +S ++ K+ R C+ +A S G
Sbjct: 121 SEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTG 173
>sp|Q02804|ARL3_YEAST ADP-ribosylation factor-like protein 3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ARL3 PE=1 SV=1
Length = 198
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 104/173 (60%), Gaps = 7/173 (4%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNI 60
MF L GL+ K ++ +LILG+D AGKTT LE LK YS + ++I PTVG N+
Sbjct: 1 MFHLVKGLYNNWNKKEQYSILILGLDNAGKTTFLETLKKEYS-LAFKALEKIQPTVGQNV 59
Query: 61 GRIEVSNSKLV-FWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLR 119
I V + +++ FWD+GGQ LRS+W +YY H ++F++D++ R ++ T L+ V+
Sbjct: 60 ATIPVDSKQILKFWDVGGQESLRSMWSEYYSLCHGIIFIVDSSDRERLDECSTTLQSVVM 119
Query: 120 NEDLQGAPLLILANKQDLPDAVSADELARYLD-----LKKLDERVCMFEAVSG 167
+E+++G P+L+LANKQD D + ++ + + D RV A++G
Sbjct: 120 DEEIEGVPILMLANKQDRQDRMEVQDIKEVFNKIAEHISARDSRVLPISALTG 172
>sp|Q54R04|ARL8_DICDI ADP-ribosylation factor-like protein 8 OS=Dictyostelium discoideum
GN=arl8 PE=3 SV=1
Length = 185
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 97/162 (59%), Gaps = 7/162 (4%)
Query: 2 FSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIG 61
F +K +F K E + ++G+ +GKTTL+ +V SN G D I PT+G N+
Sbjct: 4 FESIINFFKSLFWKQEMELTLVGLQGSGKTTLV----NVISN-GGFIEDTI-PTIGFNMK 57
Query: 62 RIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNE 121
++ N + WD+GGQP RS+WE+Y +A+VFV+D+A +FE SK AL+ ++
Sbjct: 58 KVTKGNVTIKLWDIGGQPRFRSMWERYCRGVNAIVFVVDSADREKFEQSKQALQDLINKP 117
Query: 122 DLQGAPLLILANKQDLPDAVSADELARYLDLKKLDER-VCMF 162
L PLL++ANK DLP++ DE+ + LDL+ + R VC +
Sbjct: 118 PLAKIPLLVVANKNDLPNSAGVDEMIQNLDLRGIVGREVCCY 159
>sp|Q06849|ARL2_DROME ADP-ribosylation factor-like protein 2 OS=Drosophila melanogaster
GN=Arf84F PE=2 SV=2
Length = 184
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 88/154 (57%), Gaps = 7/154 (4%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
E +L+LG+D AGKTT+L++ G P D I PT+G NI +E + L WD+G
Sbjct: 16 EMRILLLGLDNAGKTTILKRFN-------GEPIDTISPTLGFNIKTLEHNGYTLNMWDVG 68
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQD 136
GQ LRS W Y+E +V+V+D+A R E L+ +L+ E L GA LL+L NKQD
Sbjct: 69 GQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQD 128
Query: 137 LPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
LP A+S++E+ L L+ + + VS G
Sbjct: 129 LPGALSSNEIKEILHLEDITTHHWLVAGVSAVTG 162
>sp|Q7RVM2|ARF_NEUCR ADP-ribosylation factor OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=NCU08340 PE=3 SV=3
Length = 185
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 11/171 (6%)
Query: 2 FSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLN 59
S+F L+ +F K E +L++G+D AGKTT+L KLK V + + PT+G N
Sbjct: 5 LSIFGKLFDGLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTI---------PTIGFN 55
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLR 119
+ +E N + WD+GGQ +R +W Y++ ++FV+D+ R +++ L+++L
Sbjct: 56 VETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLN 115
Query: 120 NEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LL+ ANKQDLP+A++A E+ L L L +R +A G
Sbjct: 116 EDELRDALLLVFANKQDLPNAMNAAEITDKLGLSSLRQRSWYIQATCATTG 166
>sp|P51643|ARF1_XENLA ADP-ribosylation factor 1 OS=Xenopus laevis GN=arf1 PE=2 SV=2
Length = 181
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + +PT+G
Sbjct: 1 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVT---------TIPTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVL 118
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRML 111
Query: 119 RNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LL+ ANKQDLP+A++A E+ L L L R +A G
Sbjct: 112 AEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSG 163
>sp|P84079|ARF1_RAT ADP-ribosylation factor 1 OS=Rattus norvegicus GN=Arf1 PE=1 SV=2
Length = 181
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVL 118
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRML 111
Query: 119 RNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LL+ ANKQDLP+A++A E+ L L L R +A G
Sbjct: 112 AEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSG 163
>sp|P84078|ARF1_MOUSE ADP-ribosylation factor 1 OS=Mus musculus GN=Arf1 PE=1 SV=2
Length = 181
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVL 118
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRML 111
Query: 119 RNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LL+ ANKQDLP+A++A E+ L L L R +A G
Sbjct: 112 AEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSG 163
>sp|Q4R5P2|ARF1_MACFA ADP-ribosylation factor 1 OS=Macaca fascicularis GN=ARF1 PE=2 SV=3
Length = 181
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVL 118
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRML 111
Query: 119 RNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LL+ ANKQDLP+A++A E+ L L L R +A G
Sbjct: 112 AEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSG 163
>sp|P84077|ARF1_HUMAN ADP-ribosylation factor 1 OS=Homo sapiens GN=ARF1 PE=1 SV=2
Length = 181
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVL 118
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRML 111
Query: 119 RNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LL+ ANKQDLP+A++A E+ L L L R +A G
Sbjct: 112 AEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSG 163
>sp|P84080|ARF1_BOVIN ADP-ribosylation factor 1 OS=Bos taurus GN=ARF1 PE=1 SV=2
Length = 181
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVL 118
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRML 111
Query: 119 RNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LL+ ANKQDLP+A++A E+ L L L R +A G
Sbjct: 112 AEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSG 163
>sp|P61210|ARF1_LOCMI ADP-ribosylation factor 1 OS=Locusta migratoria GN=ARF1 PE=2 SV=2
Length = 182
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + +PT+G
Sbjct: 1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVT---------TIPTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVL 118
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRML 111
Query: 119 RNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LLI ANKQDLP+A++A E+ L L L R +A G
Sbjct: 112 AEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSG 163
>sp|P61209|ARF1_DROME ADP-ribosylation factor 1 OS=Drosophila melanogaster GN=Arf79F PE=2
SV=2
Length = 182
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + +PT+G
Sbjct: 1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVT---------TIPTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVL 118
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRML 111
Query: 119 RNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LLI ANKQDLP+A++A E+ L L L R +A G
Sbjct: 112 AEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSG 163
>sp|Q3SXC5|ARL14_MOUSE ADP-ribosylation factor-like protein 14 OS=Mus musculus GN=Arl14
PE=2 SV=1
Length = 192
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 93/141 (65%), Gaps = 9/141 (6%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNS-KLVFWDL 75
+ H+L+LG+D AGK+TLL +LK E L +PT+G N+ +++ +S L WD+
Sbjct: 13 QAHILLLGLDSAGKSTLLYRLKFA----ETLA---TIPTIGFNVEMVQLQSSLTLTVWDV 65
Query: 76 GGQPGLRSIWEKYYEEAHAVVFVIDAA-CPSRFEDSKTALEKVLRNEDLQGAPLLILANK 134
GGQ +R++W+ Y E A +++V+D + R EDS+ + +L+NE ++ P++ILANK
Sbjct: 66 GGQEKMRTVWDCYCENAQGLMYVVDCSEGKKRLEDSRKEFKHILKNEHIKNTPVVILANK 125
Query: 135 QDLPDAVSADELARYLDLKKL 155
QDLP A+SA+++ R +KKL
Sbjct: 126 QDLPGALSAEDITRMFKVKKL 146
>sp|P26991|ARF_GIAIN ADP-ribosylation factor OS=Giardia intestinalis PE=3 SV=3
Length = 191
Score = 116 bits (290), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 91/149 (61%), Gaps = 9/149 (6%)
Query: 12 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLV 71
+F+K E +L++G+D AGKTT+L KL + V VPT+G N+ +E N
Sbjct: 12 LFSKKEVRILMVGLDAAGKTTILYKL--MLGEVV-----TTVPTIGFNVETVEYKNINFT 64
Query: 72 FWDLGGQPGLRSIWEKYYEEAHAVVFVIDAAC--PSRFEDSKTALEKVLRNEDLQGAPLL 129
WD+GGQ +R +W YY+ A+++VID+A P R ED+K L +L ++L+ A LL
Sbjct: 65 VWDVGGQDSIRPLWRHYYQNTDALIYVIDSADLEPKRIEDAKNELHTLLGEDELRDAALL 124
Query: 130 ILANKQDLPDAVSADELARYLDLKKLDER 158
+ ANKQDLP A+S +L L L++L +R
Sbjct: 125 VFANKQDLPKAMSTTDLTERLGLQELKKR 153
>sp|Q8QHI3|ARL3_XENLA ADP-ribosylation factor-like protein 3 OS=Xenopus laevis GN=arl3
PE=2 SV=1
Length = 182
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 7/154 (4%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
E +L+LG+D AGKTTLL++L S E + I PT G NI ++ KL WD+G
Sbjct: 17 EVRILLLGLDNAGKTTLLKQLAS-----EDIS--HITPTQGFNIKSVQSQGFKLNVWDIG 69
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQD 136
GQ +R W Y+E +++VID+A RFE++ L ++L E L G P+LI ANKQD
Sbjct: 70 GQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQD 129
Query: 137 LPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
L A A E+A L+L + +RV ++ S G
Sbjct: 130 LLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTG 163
>sp|B5FYQ0|ARL3_TAEGU ADP-ribosylation factor-like protein 3 OS=Taeniopygia guttata
GN=ARL3 PE=2 SV=1
Length = 182
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 7/154 (4%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
E +L+LG+D AGKTTLL++L S E + I PT G NI ++ KL WD+G
Sbjct: 17 EVRILLLGLDNAGKTTLLKQLAS-----EDIS--HITPTQGFNIKSVQSQGFKLNVWDIG 69
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQD 136
GQ +R W Y+E +++VID+A RFE++ L ++L E L G P+LI ANKQD
Sbjct: 70 GQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQD 129
Query: 137 LPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
L A A E+A L+L + +RV ++ S G
Sbjct: 130 LLTAAPASEIAEGLNLHTIRDRVWQIQSCSALSG 163
>sp|Q75A26|ARF_ASHGO ADP-ribosylation factor OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=ARF1 PE=3 SV=3
Length = 181
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 94/168 (55%), Gaps = 11/168 (6%)
Query: 5 FYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGR 62
F L+ +F E +L++G+D AGKTT+L KLK V + + PT+G N+
Sbjct: 5 FSKLFSNLFGHKEMRILMVGLDGAGKTTVLYKLKLGEVVTTI---------PTIGFNVET 55
Query: 63 IEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNED 122
+E N WD+GGQ +R +W Y+ ++FV+D+ SR +++ L+++L ++
Sbjct: 56 VEYKNISFTVWDVGGQDKIRPLWRHYFRNTEGIIFVVDSNDRSRIAEAREVLQRMLNEDE 115
Query: 123 LQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++ A LL+ ANKQDLP+A+SA E+ L L + +R +A G
Sbjct: 116 IRNAVLLVFANKQDLPEAMSAAEITEKLGLHSIRQRPWYIQATCATSG 163
>sp|P84082|ARF2_RAT ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1
Length = 181
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVL 118
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRML 111
Query: 119 RNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LL+ NKQDLP+A++A E+ L L L +R +A G
Sbjct: 112 AEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSG 163
>sp|Q8BSL7|ARF2_MOUSE ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2
Length = 181
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVL 118
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRML 111
Query: 119 RNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LL+ NKQDLP+A++A E+ L L L +R +A G
Sbjct: 112 AEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSG 163
>sp|P84081|ARF2_BOVIN ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1
Length = 181
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVL 118
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRML 111
Query: 119 RNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LL+ NKQDLP+A++A E+ L L L +R +A G
Sbjct: 112 AEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSG 163
>sp|Q9D0J4|ARL2_MOUSE ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1
SV=1
Length = 184
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 89/156 (57%), Gaps = 10/156 (6%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
E +L+LG+D AGKTT+L+K G D I PT+G NI +E KL WD+G
Sbjct: 16 ELRLLMLGLDNAGKTTILKKFN-------GEDVDTISPTLGFNIKTLEHRGFKLNIWDVG 68
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQD 136
GQ LRS W Y+E +++V+D+A R +D + L+ +L E L GA LLI ANKQD
Sbjct: 69 GQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQD 128
Query: 137 LPDAVSADELARYLDLKKLDE---RVCMFEAVSGYD 169
LP A+S + + L+L + R+ AV+G D
Sbjct: 129 LPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGED 164
>sp|Q8BGX0|TRI23_MOUSE E3 ubiquitin-protein ligase TRIM23 OS=Mus musculus GN=Trim23 PE=2
SV=1
Length = 574
Score = 115 bits (288), Expect = 2e-25, Method: Composition-based stats.
Identities = 61/145 (42%), Positives = 88/145 (60%), Gaps = 7/145 (4%)
Query: 11 YIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKL 70
+I K E V+ LG+D AGKTT+L KLK E + P +PT+G N+ +E N K
Sbjct: 398 HIGPKMEIRVVTLGLDGAGKTTILFKLK----QDEFMQP---IPTIGFNVETVEYKNLKF 450
Query: 71 VFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLI 130
WD+GG+ LR +W+ YY AVVFV+D++ R ++ + L K+L ++L+ A LLI
Sbjct: 451 TIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLI 510
Query: 131 LANKQDLPDAVSADELARYLDLKKL 155
ANKQD+ A+S +E+ L L KL
Sbjct: 511 FANKQDVAGALSVEEITELLSLHKL 535
>sp|P36406|TRI23_HUMAN E3 ubiquitin-protein ligase TRIM23 OS=Homo sapiens GN=TRIM23 PE=1
SV=1
Length = 574
Score = 115 bits (288), Expect = 2e-25, Method: Composition-based stats.
Identities = 61/145 (42%), Positives = 88/145 (60%), Gaps = 7/145 (4%)
Query: 11 YIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKL 70
+I K E V+ LG+D AGKTT+L KLK E + P +PT+G N+ +E N K
Sbjct: 398 HIGPKMEIRVVTLGLDGAGKTTILFKLK----QDEFMQP---IPTIGFNVETVEYKNLKF 450
Query: 71 VFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLI 130
WD+GG+ LR +W+ YY AVVFV+D++ R ++ + L K+L ++L+ A LLI
Sbjct: 451 TIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLI 510
Query: 131 LANKQDLPDAVSADELARYLDLKKL 155
ANKQD+ A+S +E+ L L KL
Sbjct: 511 FANKQDVAGALSVEEITELLSLHKL 535
>sp|Q9Y7Z2|ARF6_SCHPO ADP-ribosylation factor 6 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=arf6 PE=3 SV=1
Length = 184
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
Query: 3 SLFYGLWK---YIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLN 59
SLF G K +F+ E +L+LG+D AGKTT+L KLK S V +PTVG N
Sbjct: 4 SLFKGFSKPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVT-------IPTVGFN 56
Query: 60 IGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLR 119
+ + N K WD+GGQ +R +W Y+ ++FV+D+A +R +++ L +++
Sbjct: 57 VETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIIS 116
Query: 120 NEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
+ +++ LL+LANKQDLP A+S ++ L L KL +R+ + G
Sbjct: 117 DREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDRLWNVQPTCALTG 167
>sp|P11076|ARF1_YEAST ADP-ribosylation factor 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ARF1 PE=1 SV=3
Length = 181
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 11/165 (6%)
Query: 8 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEV 65
L+ +F E +L++G+D AGKTT+L KLK V + + PT+G N+ ++
Sbjct: 8 LFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTI---------PTIGFNVETVQY 58
Query: 66 SNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQG 125
N WD+GGQ +RS+W YY V+FV+D+ SR +++ ++++L ++L+
Sbjct: 59 KNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRN 118
Query: 126 APLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
A L+ ANKQDLP+A+SA E+ L L + R +A G
Sbjct: 119 AAWLVFANKQDLPEAMSAAEITEKLGLHSIRNRPWFIQATCATSG 163
>sp|P40946|ARF3_DROME ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2
SV=3
Length = 175
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 7/147 (4%)
Query: 12 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLV 71
IF E +L+LG+D AGKTT+L KLK S +PTVG N+ + N K
Sbjct: 8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVT-------TIPTVGFNVETVTYKNVKFN 60
Query: 72 FWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLIL 131
WD+GGQ +R +W YY ++FV+D A R ++++T L +++ + +++ A +LI
Sbjct: 61 VWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIF 120
Query: 132 ANKQDLPDAVSADELARYLDLKKLDER 158
ANKQDLPDA+ E+ L L ++ +R
Sbjct: 121 ANKQDLPDAMKPHEIQEKLGLTRIRDR 147
>sp|Q25761|ARF1_PLAFO ADP-ribosylation factor 1 OS=Plasmodium falciparum (isolate NF54)
GN=ARF1 PE=2 SV=2
Length = 181
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 93/165 (56%), Gaps = 11/165 (6%)
Query: 8 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEV 65
L+ +F K + +L++G+D AGKTT+L K+K V + + PT+G N+ +E
Sbjct: 8 LFNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVVTTI---------PTIGFNVETVEF 58
Query: 66 SNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQG 125
N WD+GGQ +R +W YY ++FV+D+ R +D++ L +++ E+L+
Sbjct: 59 RNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREGLHRMINEEELKD 118
Query: 126 APLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
A +L+ ANKQDLP+A+SA E+ L L + ER ++ G
Sbjct: 119 AIILVFANKQDLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRG 163
>sp|Q2TA37|ARL2_BOVIN ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=1
SV=1
Length = 184
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 86/154 (55%), Gaps = 7/154 (4%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
E +L+LG+D AGKTT+L+K G D I PT+G NI +E KL WD+G
Sbjct: 16 ELRLLMLGLDNAGKTTILKKFN-------GEDIDTISPTLGFNIKTLEHRGFKLNIWDVG 68
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQD 136
GQ LRS W Y+E +++V+D+A R +D + L+ +L E L GA LLI ANKQD
Sbjct: 69 GQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQNLLVEERLAGATLLIFANKQD 128
Query: 137 LPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
LP A+S++ + L+L + + S G
Sbjct: 129 LPGALSSNAIREALELDSIRSHHWCIQGCSAVTG 162
>sp|P36407|TRI23_RAT E3 ubiquitin-protein ligase TRIM23 OS=Rattus norvegicus GN=Trim23
PE=2 SV=2
Length = 573
Score = 114 bits (286), Expect = 2e-25, Method: Composition-based stats.
Identities = 60/141 (42%), Positives = 86/141 (60%), Gaps = 7/141 (4%)
Query: 15 KTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWD 74
K E V+ LG+D AGKTT+L KLK E + P +PT+G N+ +E N K WD
Sbjct: 401 KMEIRVVTLGLDGAGKTTILFKLK----QDEFMQP---IPTIGFNVETVEYKNLKFTIWD 453
Query: 75 LGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANK 134
+GG+ LR +W+ YY AVVFV+D++ R ++ + L K+L ++L+ A LLI ANK
Sbjct: 454 VGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANK 513
Query: 135 QDLPDAVSADELARYLDLKKL 155
QD+ A+S +E+ L L KL
Sbjct: 514 QDVAGALSVEEITELLSLHKL 534
>sp|P36404|ARL2_HUMAN ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1
SV=4
Length = 184
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 86/154 (55%), Gaps = 7/154 (4%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
E +L+LG+D AGKTT+L+K G D I PT+G NI +E KL WD+G
Sbjct: 16 ELRLLMLGLDNAGKTTILKKFN-------GEDIDTISPTLGFNIKTLEHRGFKLNIWDVG 68
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQD 136
GQ LRS W Y+E +++V+D+A R +D + L+ +L E L GA LLI ANKQD
Sbjct: 69 GQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQD 128
Query: 137 LPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
LP A+S++ + L+L + + S G
Sbjct: 129 LPGALSSNAIREVLELDSIRSHHWCIQGCSAVTG 162
>sp|P84083|ARF5_RAT ADP-ribosylation factor 5 OS=Rattus norvegicus GN=Arf5 PE=1 SV=2
Length = 180
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 17/172 (9%)
Query: 7 GLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIE 64
L+ IF K + +L++G+D AGKTT+L KLK + + + PT+G N+ +E
Sbjct: 7 ALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVE 57
Query: 65 VSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQ 124
N WD+GGQ +R +W Y++ ++FV+D+ R ++S L+K+L+ ++L+
Sbjct: 58 YKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELR 117
Query: 125 GAPLLILANKQDLPDAVSADELARYLDLKKLDER------VCMFEAVSGYDG 170
A LL+ ANKQD+P+A+ EL L L+ L R C + YDG
Sbjct: 118 DAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDG 169
>sp|P84084|ARF5_MOUSE ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 PE=2 SV=2
Length = 180
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 17/172 (9%)
Query: 7 GLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIE 64
L+ IF K + +L++G+D AGKTT+L KLK + + + PT+G N+ +E
Sbjct: 7 ALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVE 57
Query: 65 VSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQ 124
N WD+GGQ +R +W Y++ ++FV+D+ R ++S L+K+L+ ++L+
Sbjct: 58 YKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELR 117
Query: 125 GAPLLILANKQDLPDAVSADELARYLDLKKLDER------VCMFEAVSGYDG 170
A LL+ ANKQD+P+A+ EL L L+ L R C + YDG
Sbjct: 118 DAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDG 169
>sp|P84085|ARF5_HUMAN ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2
Length = 180
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 17/172 (9%)
Query: 7 GLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIE 64
L+ IF K + +L++G+D AGKTT+L KLK + + + PT+G N+ +E
Sbjct: 7 ALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVE 57
Query: 65 VSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQ 124
N WD+GGQ +R +W Y++ ++FV+D+ R ++S L+K+L+ ++L+
Sbjct: 58 YKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELR 117
Query: 125 GAPLLILANKQDLPDAVSADELARYLDLKKLDER------VCMFEAVSGYDG 170
A LL+ ANKQD+P+A+ EL L L+ L R C + YDG
Sbjct: 118 DAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDG 169
>sp|P34727|ARF_AJECA ADP-ribosylation factor OS=Ajellomyces capsulatus GN=ARF PE=1 SV=3
Length = 183
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 96/168 (57%), Gaps = 11/168 (6%)
Query: 5 FYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGR 62
F L+ I+ K E +L++G+D AGKTT+L KLK + + + PT+G N+
Sbjct: 5 FSKLFDRIWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVET 55
Query: 63 IEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNED 122
+E N + WD+GGQ +R +W Y++ ++FV+D+ R +++ L+++L ++
Sbjct: 56 VEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDE 115
Query: 123 LQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
L+ A LL+ ANKQDLP+A+S E+ + L L+ L R ++ G
Sbjct: 116 LRDALLLVFANKQDLPNAMSPAEITQQLGLQSLTRRAWYIQSTCATTG 163
>sp|Q94650|ARF1_PLAFA ADP-ribosylation factor 1 OS=Plasmodium falciparum GN=ARF1 PE=1
SV=3
Length = 181
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 93/165 (56%), Gaps = 11/165 (6%)
Query: 8 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEV 65
L+ +F K + +L++G+D AGKTT+L K+K V + + PT+G N+ +E
Sbjct: 8 LFNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVVTTI---------PTIGFNVETVEF 58
Query: 66 SNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQG 125
N WD+GGQ +R +W YY ++FV+D+ R +D++ L +++ E+L+
Sbjct: 59 RNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKD 118
Query: 126 APLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
A +L+ ANKQDLP+A+SA E+ L L + ER ++ G
Sbjct: 119 AIILVFANKQDLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRG 163
>sp|Q7KQL3|ARF1_PLAF7 ADP-ribosylation factor 1 OS=Plasmodium falciparum (isolate 3D7)
GN=ARF1 PE=1 SV=1
Length = 181
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 93/165 (56%), Gaps = 11/165 (6%)
Query: 8 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEV 65
L+ +F K + +L++G+D AGKTT+L K+K V + + PT+G N+ +E
Sbjct: 8 LFNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVVTTI---------PTIGFNVETVEF 58
Query: 66 SNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQG 125
N WD+GGQ +R +W YY ++FV+D+ R +D++ L +++ E+L+
Sbjct: 59 RNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKD 118
Query: 126 APLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
A +L+ ANKQDLP+A+SA E+ L L + ER ++ G
Sbjct: 119 AIILVFANKQDLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRG 163
>sp|Q8N4G2|ARL14_HUMAN ADP-ribosylation factor-like protein 14 OS=Homo sapiens GN=ARL14
PE=1 SV=2
Length = 192
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 89/141 (63%), Gaps = 10/141 (7%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPD-RIVPTVGLNIGRIEVS-NSKLVFWD 74
+ VL+LG+D AGK+TLL KLK L D +PT+G N+ IE+ N L WD
Sbjct: 13 QAQVLLLGLDSAGKSTLLYKLK--------LAKDITTIPTIGFNVEMIELERNLSLTVWD 64
Query: 75 LGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANK 134
+GGQ +R++W Y E +V+V+D+ R E+S+ E +L+NE ++ P+++LANK
Sbjct: 65 VGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNVPVVLLANK 124
Query: 135 QDLPDAVSADELARYLDLKKL 155
QD+P A++A+++ R +KKL
Sbjct: 125 QDMPGALTAEDITRMFKVKKL 145
>sp|P19146|ARF2_YEAST ADP-ribosylation factor 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ARF2 PE=1 SV=3
Length = 181
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 11/165 (6%)
Query: 8 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEV 65
L+ +F E +L++G+D AGKTT+L KLK V + +PT+G N+ ++
Sbjct: 8 LFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVIT---------TIPTIGFNVETVQY 58
Query: 66 SNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQG 125
N WD+GGQ +RS+W YY V+FVID+ SR +++ ++++L ++L+
Sbjct: 59 KNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVIDSNDRSRIGEAREVMQRMLNEDELRN 118
Query: 126 APLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
A L+ ANKQDLP+A+SA E+ L L + R ++ G
Sbjct: 119 AVWLVFANKQDLPEAMSAAEITEKLGLHSIRNRPWFIQSTCATSG 163
>sp|Q61LA8|ARF12_CAEBR ADP-ribosylation factor 1-like 2 OS=Caenorhabditis briggsae
GN=arf-1.2 PE=3 SV=3
Length = 181
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNVFGSLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVL 118
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRML 111
Query: 119 RNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LL+ ANKQDLP A++A E+ L L L R +A G
Sbjct: 112 AEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYIQATCATSG 163
>sp|P36579|ARF1_SCHPO ADP-ribosylation factor 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=arf1 PE=2 SV=2
Length = 180
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 93/165 (56%), Gaps = 11/165 (6%)
Query: 8 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEV 65
L++ +F K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E
Sbjct: 8 LFQSLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEY 58
Query: 66 SNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQG 125
N WD+GGQ +R +W Y++ ++FV+D+ R ++ L+++L ++L+
Sbjct: 59 RNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRD 118
Query: 126 APLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
A LL+ ANKQDLP+A++A E+ L L L R +A G
Sbjct: 119 ALLLVFANKQDLPNAMNAAEITDKLGLHSLRHRQWYIQATCATSG 163
>sp|Q10943|ARF12_CAEEL ADP-ribosylation factor 1-like 2 OS=Caenorhabditis elegans
GN=arf-1.2 PE=2 SV=2
Length = 181
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Query: 1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGL 58
M ++F L+K +F K E +L++G+D AGKTT+L KLK + + + PT+G
Sbjct: 1 MGNVFGSLFKGLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGF 51
Query: 59 NIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVL 118
N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L
Sbjct: 52 NVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRML 111
Query: 119 RNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
++L+ A LL+ ANKQDLP A++A E+ L L L R +A G
Sbjct: 112 AEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYIQATCATSG 163
>sp|Q1MTE5|ARL3_DANRE ADP-ribosylation factor-like protein 3 OS=Danio rerio GN=arl3 PE=2
SV=1
Length = 182
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 7/154 (4%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
E +L+LG+D GKTTLL++L S E + I PT G NI ++ KL WD+G
Sbjct: 17 EVRILLLGLDNGGKTTLLKQLAS-----EDIT--HITPTQGFNIKSVQSQGFKLNVWDIG 69
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQD 136
GQ +R W Y+E +++VID+A RFE++ L ++L E L G P+L+ ANKQD
Sbjct: 70 GQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLVFANKQD 129
Query: 137 LPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
L A A E+A L+L + +RV ++ S G
Sbjct: 130 LLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTG 163
>sp|P38116|ARL1_YEAST ADP-ribosylation factor-like protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ARL1 PE=1 SV=4
Length = 183
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 3 SLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGR 62
S+F LW + E +LILG+D AGKTT+L +L+ + + + PT+G N+
Sbjct: 7 SMFDKLWG---SNKELRILILGLDGAGKTTILYRLQ-----IGEVVTTK--PTIGFNVET 56
Query: 63 IEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNED 122
+ N KL WDLGGQ +R W YY + AV+FV+D+ R + L +L+ E+
Sbjct: 57 LSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEE 116
Query: 123 LQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
LQ A LL+ ANKQD P A+SA E+++ L+L +L +R A S G
Sbjct: 117 LQDAALLVFANKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKG 164
>sp|Q627K4|ARL2_CAEBR ADP-ribosylation factor-like protein 2 OS=Caenorhabditis briggsae
GN=evl-20.1 PE=3 SV=1
Length = 184
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 7/139 (5%)
Query: 17 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLG 76
E +LILG+D AGKTTL++K P D I PT+G +I + + +L WD+G
Sbjct: 16 EMRILILGLDNAGKTTLMKKFLDE-------PTDTIEPTLGFDIKTVHFKDFQLNLWDVG 68
Query: 77 GQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQD 136
GQ LRS W+ Y+E A+++V+D++ R L+K+L+ E L GA LL+LANK D
Sbjct: 69 GQKSLRSYWKNYFESTDALIWVVDSSDRERLTQCSEELKKLLQEERLSGASLLVLANKSD 128
Query: 137 LPDAVSADELARYLDLKKL 155
LP A+ + +A+ L+L+ +
Sbjct: 129 LPGAIDVNSIAQVLELQSI 147
>sp|P0CM16|ARF_CRYNJ ADP-ribosylation factor OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=ARF PE=1
SV=1
Length = 182
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 92/161 (57%), Gaps = 11/161 (6%)
Query: 12 IFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSK 69
+F K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N
Sbjct: 12 LFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNIS 62
Query: 70 LVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLL 129
WD+GGQ +R +W Y++ ++FV+D+ R +++ L+++L ++L+ A LL
Sbjct: 63 FTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERITEAREELQRMLSEDELRDALLL 122
Query: 130 ILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDG 170
+ ANKQDLP+A++A E+ L L L +R +A G
Sbjct: 123 VFANKQDLPNAMNAAEITDKLGLHSLRQRSWYIQAACATSG 163
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.140 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,950,343
Number of Sequences: 539616
Number of extensions: 2638656
Number of successful extensions: 12594
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 1217
Number of HSP's that attempted gapping in prelim test: 11305
Number of HSP's gapped (non-prelim): 2004
length of query: 170
length of database: 191,569,459
effective HSP length: 109
effective length of query: 61
effective length of database: 132,751,315
effective search space: 8097830215
effective search space used: 8097830215
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)