BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030849
MGGGDEKKLKHRNRVLNNKMPLWLTQLVACDRSGSPSMEDIEAFCTTYRARLDEAEIAKS
IPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVGETVTTGSPSESDGVFRLISFDM
ETECCTWGLADVRINREKAGKGRPLSKKQREWRLNTTFDSLRLVRLHSDC

High Scoring Gene Products

Symbol, full name Information P value
AT1G77122 protein from Arabidopsis thaliana 8.3e-51
AT1G69210 protein from Arabidopsis thaliana 1.3e-27

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030849
        (170 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1005716723 - symbol:AT1G77122 "AT1G77122" spec...   528  8.3e-51   1
TAIR|locus:2033263 - symbol:AT1G69210 "AT1G69210" species...   309  1.3e-27   1


>TAIR|locus:1005716723 [details] [associations]
            symbol:AT1G77122 "AT1G77122" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
            UniGene:At.22653 UniGene:At.64099 InterPro:IPR003728 Pfam:PF02576
            EMBL:BT028925 EMBL:AK221733 EMBL:AK227101 IPI:IPI00534864
            RefSeq:NP_849898.1 ProteinModelPortal:Q56XE2 PaxDb:Q56XE2
            PRIDE:Q56XE2 EnsemblPlants:AT1G77122.1 GeneID:844048
            KEGG:ath:AT1G77122 TAIR:At1g77122 eggNOG:NOG113194
            HOGENOM:HOG000083803 InParanoid:Q56XE2 OMA:RFKERAM PhylomeDB:Q56XE2
            ProtClustDB:CLSN2714441 Genevestigator:Q56XE2 Uniprot:Q56XE2
        Length = 323

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 99/140 (70%), Positives = 118/140 (84%)

Query:    31 DRSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 90
             ++ GSP+MEDIEAF T YRA+L EAE+AKSIP+N SLEVSSPGVERVVRIP +L+R+KDR
Sbjct:   188 NKFGSPTMEDIEAFSTIYRAKLAEAELAKSIPDNISLEVSSPGVERVVRIPQDLDRYKDR 247

Query:    91 AMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKKQR 150
              MYV+Y  E   T    E DG+FRL+SFD+E + C WG+AD+R+NREKAGKGRPLSKKQR
Sbjct:   248 PMYVRYTNEDTET----EGDGIFRLVSFDVEAKICIWGIADIRVNREKAGKGRPLSKKQR 303

Query:   151 EWRLNTTFDSLRLVRLHSDC 170
             EWRL T F+SLRLVRLHS+C
Sbjct:   304 EWRLETAFESLRLVRLHSEC 323


>TAIR|locus:2033263 [details] [associations]
            symbol:AT1G69210 "AT1G69210" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009560 "embryo sac egg cell differentiation"
            evidence=RCA] HAMAP:MF_01077 EMBL:CP002684
            GenomeReviews:CT485782_GR InterPro:IPR003728 Pfam:PF02576
            UniGene:At.48351 UniGene:At.71139 EMBL:AF372924 EMBL:AY133517
            IPI:IPI00539800 RefSeq:NP_564954.1 ProteinModelPortal:Q94JV0
            PRIDE:Q94JV0 EnsemblPlants:AT1G69210.1 GeneID:843252
            KEGG:ath:AT1G69210 TAIR:At1g69210 HOGENOM:HOG000084433
            InParanoid:Q94JV0 OMA:YVYVRLD PhylomeDB:Q94JV0
            ProtClustDB:CLSN2689097 ArrayExpress:Q94JV0 Genevestigator:Q94JV0
            Uniprot:Q94JV0
        Length = 305

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 63/136 (46%), Positives = 87/136 (63%)

Query:    34 GSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMY 93
             G P+M+++E F   ++ RLD+A   K IPE+ +LEVSSPG ER++R+P +L RFKD  M 
Sbjct:   172 GCPTMDELEEFSREFKKRLDDAGAEKVIPEDLALEVSSPGAERLLRVPEDLPRFKDMPMT 231

Query:    94 VKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKKQREWR 153
             V YV ET      +   GVF L S D E++ C W LADVR NR+   KGRPLS+KQ++ R
Sbjct:   232 VSYVEET--NSRKAVKSGVFLLESIDAESDNCVWKLADVRENRDPESKGRPLSRKQKDLR 289

Query:   154 LNTTFDSLRLVRLHSD 169
             +   F   + + L+ D
Sbjct:   290 ITLPFADHKKINLYLD 305


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.133   0.399    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      170       170   0.00086  108 3  11 22  0.41    32
                                                     31  0.47    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  155 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.28u 0.11s 16.39t   Elapsed:  00:00:01
  Total cpu time:  16.28u 0.11s 16.39t   Elapsed:  00:00:01
  Start:  Fri May 10 00:25:50 2013   End:  Fri May 10 00:25:51 2013

Back to top