BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030852
(170 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6AZD4|IMP2L_DANRE Mitochondrial inner membrane protease subunit 2 OS=Danio rerio
GN=immp2l PE=2 SV=1
Length = 183
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 93/158 (58%), Gaps = 6/158 (3%)
Query: 3 AQNFLWSFTKNCFTFGLIGLTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVE 62
+ + +F F + +T+ DR A + V G+SM P+ N +S S D VL+
Sbjct: 7 GRRYFKAFVSGFFVAVPVTVTVLDRLAYVARVEGASMQPSLNPDGES-----SPDVVLLN 61
Query: 63 KFCLQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGT-PMTNDVMKVPNGHCWVEG 121
++ ++ Y GD++ SP N ++K +KR+IG+ GD+I T N ++VP+GH W+EG
Sbjct: 62 RWSVRNYHVQRGDIVSVLSPKNPQQKIIKRVIGIEGDFIKTLGYKNRYVRVPDGHLWIEG 121
Query: 122 DNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRVRHIE 159
D+ S DS +FGP+ LGL+ G +HI+WPP R + IE
Sbjct: 122 DHHGHSFDSNAFGPVSLGLVHGRASHIIWPPSRWQRIE 159
>sp|Q8BPT6|IMP2L_MOUSE Mitochondrial inner membrane protease subunit 2 OS=Mus musculus
GN=Immp2l PE=2 SV=1
Length = 175
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 91/158 (57%), Gaps = 6/158 (3%)
Query: 3 AQNFLWSFTKNCFTFGLIGLTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVE 62
A+ +F K F + +T DR A + V GSSM P+ N GS S D VL+
Sbjct: 8 ARRCFKAFCKGFFVAVPVAVTFLDRVACVARVEGSSMQPSLNPG-----GSQSSDVVLLN 62
Query: 63 KFCLQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGT-PMTNDVMKVPNGHCWVEG 121
+ ++ ++ GD++ SP N ++K +KR+I L GD + T N ++KVP GH WVEG
Sbjct: 63 HWKVRNFEVQRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRLVKVPRGHMWVEG 122
Query: 122 DNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRVRHIE 159
D+ S DS SFGP+ LGL+ THILWPP+R + +E
Sbjct: 123 DHHGHSFDSNSFGPVSLGLLHAHATHILWPPERWQRLE 160
>sp|Q96T52|IMP2L_HUMAN Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens
GN=IMMP2L PE=2 SV=1
Length = 175
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 6/157 (3%)
Query: 4 QNFLWSFTKNCFTFGLIGLTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVEK 63
+ ++ +F K F + +T DR A + V G+SM P+ N GS S D VL+
Sbjct: 9 KRYIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPG-----GSQSSDVVLLNH 63
Query: 64 FCLQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGT-PMTNDVMKVPNGHCWVEGD 122
+ ++ ++ GD++ SP N ++K +KR+I L GD + T N +KVP GH WVEGD
Sbjct: 64 WKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWVEGD 123
Query: 123 NPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRVRHIE 159
+ S DS SFGP+ LGL+ THILWPP+R + +E
Sbjct: 124 HHGHSFDSNSFGPVSLGLLHAHATHILWPPERWQKLE 160
>sp|Q2KI92|IMP2L_BOVIN Mitochondrial inner membrane protease subunit 2 OS=Bos taurus
GN=IMMP2L PE=2 SV=1
Length = 177
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 6/158 (3%)
Query: 3 AQNFLWSFTKNCFTFGLIGLTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVE 62
+ + +F K F + +T DR A + V G+SM P+ N GS S D VL+
Sbjct: 8 VRRYFKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPG-----GSQSSDVVLLN 62
Query: 63 KFCLQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGT-PMTNDVMKVPNGHCWVEG 121
+ ++ ++ GD++ SP N ++K +KR+I L GD + T N +KVP GH WVEG
Sbjct: 63 HWKVRNFEVQRGDIVSLVSPKNPEQKIIKRVIALEGDIVKTMGHKNRYVKVPRGHIWVEG 122
Query: 122 DNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRVRHIE 159
D+ S DS SFGP+ LGL+ THILWPP+R + +E
Sbjct: 123 DHHGHSFDSNSFGPVSLGLLHAHATHILWPPKRWQKLE 160
>sp|Q5PQ63|IMP2L_XENLA Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis
GN=immp2l PE=2 SV=1
Length = 170
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
Query: 3 AQNFLWSFTKNCFTFGLIGLTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVE 62
+ ++ +F F + +T DR A I V G SM P+ N D VL+
Sbjct: 5 GRRYVRAFISGFFVAVPVTVTFLDRVACIARVEGVSMQPSLNPDARG-----ESDIVLLN 59
Query: 63 KFCLQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGT-PMTNDVMKVPNGHCWVEG 121
++ + Y GD++ SP N ++K +KR+I L GD + T N +KVP GH WVEG
Sbjct: 60 RWRARNYDVQRGDIVSLVSPKNPEQKIIKRVIALEGDIVKTLGHKNRYVKVPRGHVWVEG 119
Query: 122 DNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQR 154
D+ S DS +FGP+ LGL+ THILWPP R
Sbjct: 120 DHHGHSFDSNAFGPVSLGLLHSHATHILWPPNR 152
>sp|P46972|IMP2_YEAST Mitochondrial inner membrane protease subunit 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMP2 PE=1
SV=1
Length = 177
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 22 LTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQK-YKFSHGDVIVFC 80
LTI++ I V+G+SM PT N T++ L+ D+VL+ KF ++ S D+I+F
Sbjct: 25 LTINNNVVHIAQVKGTSMQPTLNPQTET----LATDWVLLWKFGVKNPSNLSRDDIILFK 80
Query: 81 SPSNHKEKHVKRIIGLPGDWIGT--PMTNDVMKVPNGHCWVEGDNPSSSLDSRSFGPIPL 138
+P+N ++ + KR+ GLP D I T P + +P GH WVEGDN S+DS +FGPI
Sbjct: 81 APTNPRKVYCKRVKGLPFDTIDTKFPYPKPQVNLPRGHIWVEGDNYFHSIDSNTFGPISS 140
Query: 139 GLIKGWVTHILWPPQR 154
GL+ G I+WPP R
Sbjct: 141 GLVIGKAITIVWPPSR 156
>sp|Q96LU5|IMP1L_HUMAN Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens
GN=IMMP1L PE=2 SV=1
Length = 166
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 72/149 (48%), Gaps = 23/149 (15%)
Query: 16 TFGLIGLTIS---------DRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCL 66
TF L+G TI + +V G SM PT + D V E
Sbjct: 9 TFRLVGYTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQ----------NSDIVFAENLSR 58
Query: 67 QKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVMK----VPNGHCWVEGD 122
Y GD+++ SPS+ K KR+IGL GD I T +D K VP GH W+EGD
Sbjct: 59 HFYGIQRGDIVIAKSPSDPKSNICKRVIGLEGDKILTTSPSDFFKSHSYVPMGHVWLEGD 118
Query: 123 NPSSSLDSRSFGPIPLGLIKGWVTHILWP 151
N +S DSR +GPIP GLI+G + +WP
Sbjct: 119 NLQNSTDSRCYGPIPYGLIRGRIFFKIWP 147
>sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1 OS=Mus musculus
GN=Immp1l PE=2 SV=1
Length = 166
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 17 FGLIGLTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDV 76
+G I + +V G SM PT + D V E Y GD+
Sbjct: 19 YGCIAHCAFEYVGGVVMCSGPSMEPTIQ----------NSDIVFAENLSRHFYGIQRGDI 68
Query: 77 IVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVMK----VPNGHCWVEGDNPSSSLDSRS 132
++ SPS+ K KR+IGL GD I + +DV K VP GH W+EGDN +S DSR
Sbjct: 69 VIAKSPSDPKSNICKRVIGLEGDKILSTSPSDVFKSRSYVPTGHVWLEGDNLQNSTDSRY 128
Query: 133 FGPIPLGLIKGWVTHILWP 151
+GPIP GLI+G + +WP
Sbjct: 129 YGPIPYGLIRGRIFFKIWP 147
>sp|Q9UST2|IMP2L_SCHPO Mitochondrial inner membrane protease subunit 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC336.13c PE=3 SV=1
Length = 180
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 84/165 (50%), Gaps = 21/165 (12%)
Query: 12 KNCFTFGLIGLT--------ISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVEK 63
K+ F L+G+T + S+ + G SM P FN T+ L D VL+ K
Sbjct: 12 KSVFFKNLVGITLWVPVLMFVEQHVVSVGTIEGRSMKPAFNPETNM----LQRDRVLLWK 67
Query: 64 FCLQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGT--PMTNDVMKVPNGHCWVEG 121
+ + YK GDV++ SP N +E VKR++G+ D + T P ++ VP GH WVEG
Sbjct: 68 WN-KDYK--RGDVVILRSPENPEELLVKRVLGVEYDIMKTRPPKKLSLVPVPEGHVWVEG 124
Query: 122 DNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRVRHIE----RKN 162
D S+DS FGP+ GLI V IL+P R I+ RKN
Sbjct: 125 DEQFHSIDSNKFGPVSTGLITAKVIAILFPFSRAGRIDHEGFRKN 169
>sp|O74800|IMP1_SCHPO Mitochondrial inner membrane protease subunit 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=imp1 PE=3 SV=1
Length = 157
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 69/119 (57%), Gaps = 12/119 (10%)
Query: 36 GSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQ-KYKFSHGDVIVFCSPSNHKEKHVKRII 94
G SM PT N ++VL++K + S GDV+V PS+ K+ KRII
Sbjct: 33 GPSMMPTLNS---------GGEFVLLDKLHGRFARSCSVGDVVVSAKPSDSKQHVCKRII 83
Query: 95 GLPGD--WIGTPMTNDVMKVPNGHCWVEGDNPSSSLDSRSFGPIPLGLIKGWVTHILWP 151
G+PGD ++ +N + +P GH W+ GDN + SLDSR++GP+P+GLIK V +WP
Sbjct: 84 GMPGDTIYVDPTSSNKKITIPLGHVWLAGDNIAHSLDSRNYGPVPMGLIKAKVIARVWP 142
>sp|Q28I39|IMP1L_XENTR Mitochondrial inner membrane protease subunit 1 OS=Xenopus
tropicalis GN=immp1l PE=2 SV=1
Length = 167
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 16 TFGLIGLTIS---------DRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCL 66
T GL+G TI + +V G SM PT + D +L +
Sbjct: 9 TLGLLGYTIQYGCIAHCAFEYIGEVVICSGPSMEPTIR----------NYDVLLCDNLSR 58
Query: 67 QKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVMK----VPNGHCWVEGD 122
+ GD+IV SP KR+IGL GD + + ++K VP GH W+EGD
Sbjct: 59 HFFSIHKGDIIVAKSPDKPSVNICKRVIGLEGDKVCMSSPSALLKRHTYVPKGHVWLEGD 118
Query: 123 NPSSSLDSRSFGPIPLGLIKGWVTHILWP 151
N +S DSRS+GP+P LI+G + +WP
Sbjct: 119 NLDNSTDSRSYGPVPYALIRGRICLRVWP 147
>sp|P28627|IMP1_YEAST Mitochondrial inner membrane protease subunit 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMP1 PE=1
SV=3
Length = 190
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 72/154 (46%), Gaps = 26/154 (16%)
Query: 7 LWSFTKNCFTFGLIGLTISDRYA-SIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFC 65
+WS T + L L I YA RG SM PT S ++DYV V K
Sbjct: 8 IWSKTFSYAIRSLCFLHIIHMYAYEFTETRGESMLPTL---------SATNDYVHVLKNF 58
Query: 66 LQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGD-----------WIGTPMTND-----V 109
GD IV P++ + KR+ G+PGD ++G + ++
Sbjct: 59 QNGRGIKMGDCIVALKPTDPNHRICKRVTGMPGDLVLVDPSTIVNYVGDVLVDEERFGTY 118
Query: 110 MKVPNGHCWVEGDNPSSSLDSRSFGPIPLGLIKG 143
+KVP GH WV GDN S SLDSR++ +P+GLI G
Sbjct: 119 IKVPEGHVWVTGDNLSHSLDSRTYNALPMGLIMG 152
>sp|Q9M9Z2|TPP2_ARATH Probable thylakoidal processing peptidase 2, chloroplastic
OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1
Length = 367
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 40/184 (21%)
Query: 11 TKNCFTFGLIGLTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYK 70
K FT + L A + +SM PT ++ D V+ EK K
Sbjct: 187 AKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDV----------GDRVIAEKVSYFFRK 236
Query: 71 FSHGDVIVFCSPS-------NHKEKHVKRIIGLPGDWI----GTPMTNDVMK-------- 111
D+++F +P + + +KRI+ GDW+ G + ND ++
Sbjct: 237 PEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEP 296
Query: 112 ---------VPNGHCWVEGDNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRVRHIERKN 162
VP G+ +V GDN + S DS ++GP+P+ I G WPP +V I +
Sbjct: 297 IDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPSKVSDI--IH 354
Query: 163 HENI 166
HE +
Sbjct: 355 HEQV 358
>sp|O04348|TPP1_ARATH Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis
thaliana GN=TPP1 PE=2 SV=2
Length = 340
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 41/176 (23%)
Query: 11 TKNCFTFGLIGLTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYK 70
K FT + + A + +SM PT + D V+ EK K
Sbjct: 157 AKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLD----------KGDRVMAEKVSYFFRK 206
Query: 71 FSHGDVIVFCSPS----------NHKEKHVKRIIGLPGDWI----GTPMTNDVMK----- 111
D+++F +P + + +KRI+ GDW+ G ND+++
Sbjct: 207 PEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFV 266
Query: 112 ------------VPNGHCWVEGDNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRV 155
VP G+ +V GDN + S DS ++GP+P+ I G WPP +V
Sbjct: 267 LEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPSKV 322
>sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1
PE=2 SV=2
Length = 291
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 71/170 (41%), Gaps = 40/170 (23%)
Query: 16 TFGLIGLTISDRYASIVP--VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSH 73
F I ++++ RY P + SM PTF++ D ++ EK K
Sbjct: 118 VFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDV----------GDRLVAEKVSYYFRKPCA 167
Query: 74 GDVIVFCSPSNHKEK-------HVKRIIGLPGDWI----GTPMTNDV------------- 109
D+++F SP +E +KRI+ GD + G M N V
Sbjct: 168 NDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEPPGY 227
Query: 110 ----MKVPNGHCWVEGDNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRV 155
++VP +V GDN ++S DS +GP+PL I G WPP RV
Sbjct: 228 EMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPNRV 277
>sp|Q57350|LEPQ_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=3
SV=1
Length = 185
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 62/158 (39%), Gaps = 47/158 (29%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
V+G SM PT + + + V KF F GD++V + K +VKR+
Sbjct: 39 VQGESMKPTL----------FNSERLFVNKFVKYTGDFKRGDIVV-LNGEEKKTHYVKRL 87
Query: 94 IGLPGDWIGTPMTNDVM---------------------------------KVPNGHCWVE 120
IGLPGD I M ND + KVP +V
Sbjct: 88 IGLPGDTI--EMKNDNLFVNGKRFNEEYLKENKKDAHDSDLNLTGDFGPIKVPKDKYFVM 145
Query: 121 GDNPSSSLDSRS-FGPIPLGLIKGWVTHILWPPQRVRH 157
GDN +S+DSR+ G I G + +P R+RH
Sbjct: 146 GDNRQNSMDSRNGLGLFNKKDIVGVEELVFFPLDRIRH 183
>sp|P41027|LEP_BACCL Signal peptidase I OS=Bacillus caldolyticus GN=lepB PE=3 SV=1
Length = 182
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 61/155 (39%), Gaps = 51/155 (32%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
V G SM PT + LS D + +F D+IVF +N KE +VKR+
Sbjct: 34 VEGKSMMPTLESGNLLIVNKLSYDIGPIRRF----------DIIVF--HANKKEDYVKRV 81
Query: 94 IGLPGDWIGTPMTNDVM-------------------------------------KVPNGH 116
IGLPGD I ND++ +VP G
Sbjct: 82 IGLPGDRIA--YKNDILYVNGKKVDEPYLRPYKQKLLDGRLTGDFTLEEVTGKTRVPPGC 139
Query: 117 CWVEGDNPSSSLDSRSFGPIPLGLIKGWVTHILWP 151
+V GDN SS DSR FG + + I G V WP
Sbjct: 140 IFVLGDNRLSSWDSRHFGFVKINQIVGKVDFRYWP 174
>sp|P73157|LEP2_SYNY3 Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB2 PE=3 SV=1
Length = 218
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 70/178 (39%), Gaps = 36/178 (20%)
Query: 4 QNFLWSFTKNCFTFGLIGLTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVEK 63
+N K T ++ + I A + SSM PT + +D +++EK
Sbjct: 18 ENTWLELGKTMVTAVILAIGIRTFVAEARYIPSSSMEPTLQI----------NDRLIIEK 67
Query: 64 FCLQKYKFSHGDVIVF-----CSPSNHKEKHVKRIIGLPGD------------------- 99
+ G+++VF N + +KRIIGLPGD
Sbjct: 68 ISYRLRDPERGEIVVFNPTDALKAKNFHDAFIKRIIGLPGDEVRVSQGNVYVNGKMLDEN 127
Query: 100 WIGTPMTNDV--MKVPNGHCWVEGDNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRV 155
+I P + +KVP+ V GDN ++S DS +G +P + G WP RV
Sbjct: 128 YIAAPPAYEYGPVKVPDDQYLVLGDNRNNSYDSHYWGFVPREKLLGRAFVRFWPVPRV 185
>sp|O07560|LEPV_BACSU Signal peptidase I V OS=Bacillus subtilis (strain 168) GN=sipV PE=2
SV=1
Length = 168
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 51/171 (29%)
Query: 15 FTFGLIGLTISDRYASIV----PVRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYK 70
F G++ + ++ + + V V G SM+PTF + + S + + +F
Sbjct: 7 FLAGVVSVVLAIQVKNAVFIDYKVEGVSMNPTFQEGNELLVNKFSHRFKTIHRF------ 60
Query: 71 FSHGDVIVFCSPSNHKEKHVKRIIGLPGDWI---------------------------GT 103
D+++F P +HK +KR+IGLPG+ I G+
Sbjct: 61 ----DIVLFKGP-DHKV-LIKRVIGLPGETIKYKDDQLYVNGKQVAEPFLKHLKSVSAGS 114
Query: 104 PMTND--------VMKVPNGHCWVEGDNPSSSLDSRSFGPIPLGLIKGWVT 146
+T D KVP G +V GDN S DSR FGPI I G ++
Sbjct: 115 HVTGDFSLKDVTGTSKVPKGKYFVVGDNRIYSFDSRHFGPIREKNIVGVIS 165
>sp|P42668|LEP_BACLI Signal peptidase I OS=Bacillus licheniformis GN=lepB PE=3 SV=1
Length = 186
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 72/188 (38%), Gaps = 43/188 (22%)
Query: 4 QNFLWSFTKNCFTFGLIGLTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVEK 63
+N L+ + K ++ L I V G+SM PT + + + V K
Sbjct: 10 KNSLFEWVKAIIIAVVLALLIRAFLFEPYLVEGTSMDPTLH----------DGERLFVYK 59
Query: 64 FCLQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGD------------------------ 99
+F GD+++ + +VKR+IGLPGD
Sbjct: 60 TVRYVGEFKRGDIVIIDGDEKNVH-YVKRLIGLPGDTVQMKDDTLYINGKKVSEPYLSEN 118
Query: 100 -----WIGTPMTNDV--MKVPNGHCWVEGDNPSSSLDSRS-FGPIPLGLIKGWVTHILWP 151
+G +T D +KVP G +V GDN S+DSR+ G I + G + +P
Sbjct: 119 RKEAEAVGVKLTGDFGPVKVPEGKYFVMGDNRQRSMDSRNGLGLIDKKRVAGTSQFVFFP 178
Query: 152 PQRVRHIE 159
+R +
Sbjct: 179 FNEIRKTD 186
>sp|Q51876|LEP_PHOLA Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1
Length = 203
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 29/140 (20%)
Query: 45 LTTDSFMGSLS-DDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKH-------VKRIIGL 96
+ ++S + +L +D ++VEK GD+IVF K+++ +KR+IGL
Sbjct: 55 IPSESMLPTLEVNDRLIVEKISYHFNPPRRGDIIVFHPTEALKQQNPSLNEAFIKRVIGL 114
Query: 97 PGDWI----------GTPMTNDVMKVPNGHCW-----------VEGDNPSSSLDSRSFGP 135
PG+ + G P+ + ++ P + W V GDN ++S DS +G
Sbjct: 115 PGETVQVTGGRVLINGQPLEENYIQSPPDYQWGPEKVPADSFLVLGDNRNNSYDSHFWGY 174
Query: 136 IPLGLIKGWVTHILWPPQRV 155
+P I G WP R+
Sbjct: 175 VPRQNIIGRAVVRFWPVNRL 194
>sp|P42959|LEPU_BACSU Signal peptidase I U OS=Bacillus subtilis (strain 168) GN=sipU PE=1
SV=1
Length = 187
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 59/134 (44%), Gaps = 41/134 (30%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
+ GSSM+PT DS + +LV+K F GD+IV + + VKR+
Sbjct: 42 IEGSSMAPTLK---DS-------ERILVDKAVKWTGGFHRGDIIVIHDKKSGRS-FVKRL 90
Query: 94 IGLPGDWI-----------------------------GTPMTNDV-MKVPNGHCWVEGDN 123
IGLPGD I G +T D ++VP+G +V GDN
Sbjct: 91 IGLPGDSIKMKNDQLYINDKKVEEPYLKEYKQEVKESGVTLTGDFEVEVPSGKYFVMGDN 150
Query: 124 PSSSLDSRSFGPIP 137
+SLDSR+ +P
Sbjct: 151 RLNSLDSRNGMGMP 164
>sp|P37943|LEPP_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=1
SV=1
Length = 186
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 61/159 (38%), Gaps = 49/159 (30%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEK---HV 90
V G SM PT + + + V K F GD+I+ N KEK +V
Sbjct: 40 VEGKSMDPTL----------VDSERLFVNKTVKYTGNFKRGDIIIL----NGKEKSTHYV 85
Query: 91 KRIIGLPGDW-----------------------------IGTPMTNDV--MKVPNGHCWV 119
KR+IGLPGD +G +T D +KVP +V
Sbjct: 86 KRLIGLPGDTVEMKNDHLFINGNEVKEPYLSYNKENAKKVGINLTGDFGPIKVPKDKYFV 145
Query: 120 EGDNPSSSLDSRS-FGPIPLGLIKGWVTHILWPPQRVRH 157
GDN S+DSR+ G I+G + +P +R
Sbjct: 146 MGDNRQESMDSRNGLGLFTKDDIQGTEEFVFFPFSNMRK 184
>sp|P0A069|LEP_STAAW Signal peptidase IB OS=Staphylococcus aureus (strain MW2) GN=spsB
PE=3 SV=1
Length = 191
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 59/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V V + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIIGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------GTPMTNDVMK-------------------------VPN 114
IG+PGD + P N +K +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRVRH 157
G V GDN S DSR+FG I I G V+ WP +H
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKH 182
>sp|P0A070|LEP_STAAU Signal peptidase IB OS=Staphylococcus aureus GN=spsB PE=3 SV=1
Length = 191
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 59/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V V + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIIGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------GTPMTNDVMK-------------------------VPN 114
IG+PGD + P N +K +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRVRH 157
G V GDN S DSR+FG I I G V+ WP +H
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKH 182
>sp|Q6GAW1|LEP_STAAS Signal peptidase IB OS=Staphylococcus aureus (strain MSSA476)
GN=spsB PE=3 SV=1
Length = 191
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 59/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V V + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIIGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------GTPMTNDVMK-------------------------VPN 114
IG+PGD + P N +K +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRVRH 157
G V GDN S DSR+FG I I G V+ WP +H
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKH 182
>sp|P0A068|LEP_STAAN Signal peptidase IB OS=Staphylococcus aureus (strain N315) GN=spsB
PE=1 SV=1
Length = 191
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 59/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V V + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIIGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------GTPMTNDVMK-------------------------VPN 114
IG+PGD + P N +K +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRVRH 157
G V GDN S DSR+FG I I G V+ WP +H
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKH 182
>sp|P0A067|LEP_STAAM Signal peptidase IB OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=spsB PE=3 SV=1
Length = 191
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 59/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V V + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIIGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------GTPMTNDVMK-------------------------VPN 114
IG+PGD + P N +K +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRVRH 157
G V GDN S DSR+FG I I G V+ WP +H
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKH 182
>sp|P57347|LEP_BUCAI Signal peptidase I OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=lepB PE=3 SV=1
Length = 314
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 28 YASIVPVRGSSMSPTFNLTTDSFMGSL-SDDYVLVEKF------------CLQKYKFSHG 74
+ +I +R P F + + S M +L D++LVEKF ++ K + G
Sbjct: 68 FLAIFIIRSFIYEP-FQIPSGSMMPTLLVGDFILVEKFSYGIKEPITHKILIRTKKPNRG 126
Query: 75 DVIVFCSPSNHKEKHVKRIIGLPGDWI 101
D+ VF P++H ++KRIIGLPGD I
Sbjct: 127 DIAVFQHPTDHNINYIKRIIGLPGDKI 153
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 112 VPNGHCWVEGDNPSSSLDSRSFGPIP 137
VP G ++ GDN +SLDSR +G +P
Sbjct: 254 VPKGEYFMMGDNRDNSLDSRYWGFVP 279
>sp|P72660|LEP1_SYNY3 Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB1 PE=3 SV=1
Length = 196
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 29/139 (20%)
Query: 45 LTTDSFMGSLSD-DYVLVEKFCLQKYKFSHGDVIVFCSPS-------NHKEKHVKRIIGL 96
+ +DS + +L D ++VEK + GD+IVF P + + +KR+I L
Sbjct: 40 IPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQAFIKRVIAL 99
Query: 97 PGDWI----------GTPMTND-----------VMKVPNGHCWVEGDNPSSSLDSRSFGP 135
PG + G P+ + ++VP+G +V GDN ++S DS +G
Sbjct: 100 PGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVMGDNRNNSNDSHVWGF 159
Query: 136 IPLGLIKGWVTHILWPPQR 154
+P I G +P R
Sbjct: 160 LPQQNIIGHALFRFFPASR 178
>sp|Q5HHB9|LEP_STAAC Signal peptidase IB OS=Staphylococcus aureus (strain COL) GN=spsB
PE=3 SV=2
Length = 191
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 59/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V V + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIVGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------GTPMTNDVMK-------------------------VPN 114
IG+PGD + P N +K +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRVRH 157
G V GDN S DSR+FG I I G V+ WP +H
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKH 182
>sp|P41026|LEP1_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipA PE=3 SV=1
Length = 185
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 45/155 (29%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
V G SM PT + F+ +++ Y+ F G ++V + H +VKRI
Sbjct: 41 VDGESMEPTLHDRERIFV-NMTVKYI---------SDFKRGQIVVLNGENEH---YVKRI 87
Query: 94 IGLPGDWI-----------------------------GTPMTNDV--MKVPNGHCWVEGD 122
IGLPGD + G +T+D +KVP+ +V GD
Sbjct: 88 IGLPGDTVQMKNDQLYINGKKVSEPYLAANKKKAKQDGYTLTDDFGPVKVPDDKYFVMGD 147
Query: 123 NPSSSLDSRS-FGPIPLGLIKGWVTHILWPPQRVR 156
N +S+DSR+ G I G + +P +R
Sbjct: 148 NRRNSMDSRNGLGLFTKKQIAGTSKFVFFPFNEIR 182
>sp|Q6GIC3|LEP_STAAR Signal peptidase IB OS=Staphylococcus aureus (strain MRSA252)
GN=spsB PE=3 SV=1
Length = 191
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 59/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V V + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIIGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------GTPMTNDVMK-------------------------VPN 114
IG+PGD + P N +K +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLIKGWVTHILWPPQRVRH 157
G V GDN S DSR+FG I I G V+ WP ++
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKY 182
>sp|Q89AM6|LEP_BUCBP Signal peptidase I OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=lepB PE=3 SV=1
Length = 310
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 31 IVPVRGSSMSPTFNLTTDSFMGSL-SDDYVLVEKFCLQ-KYKFSH-----------GDVI 77
IV + + + F + ++S M +L D++LV+KF K FS+ GD++
Sbjct: 64 IVFIIRTFICEPFQIPSESMMPTLLPGDFILVKKFSYGIKNPFSNNVIVFINTPKRGDIV 123
Query: 78 VFCSPSNHKEKHVKRIIGLPGDWIG 102
VF P+N+ +VKRI+GLPGD I
Sbjct: 124 VFKHPNNNAINYVKRIVGLPGDKIN 148
Score = 30.0 bits (66), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Query: 84 NHKEKHVKRIIGLPGDWIGTPMTNDVMKVPNGHCWVEGDNPSSSLDSRSFGPIPLGLIKG 143
+ K+ + K+ G WI VP +V GDN +SLDSR +G +P + G
Sbjct: 232 DQKDLYFKQFSQKQGTWI----------VPKHKYFVLGDNRDNSLDSRYWGFVPEKNLIG 281
Query: 144 WVTHI 148
V I
Sbjct: 282 KVVFI 286
>sp|P28628|LEPS_BACSU Signal peptidase I S OS=Bacillus subtilis (strain 168) GN=sipS PE=1
SV=1
Length = 184
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 50/158 (31%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
V G SM PT + F+ +++ Y+ +F GD++V H +VKRI
Sbjct: 39 VDGDSMYPTLHNRERVFV-NMTVKYI---------GEFDRGDIVVLNGDDVH---YVKRI 85
Query: 94 IGLPGDWIGTPMTNDVM----------------------------------KVPNGHCWV 119
IGLPGD + M ND + KVP+ +V
Sbjct: 86 IGLPGDTV--EMKNDQLYINGKKVDEPYLAANKKRAKQDGFDHLTDDFGPVKVPDNKYFV 143
Query: 120 EGDNPSSSLDSRS-FGPIPLGLIKGWVTHILWPPQRVR 156
GDN +S+DSR+ G I G + +P +R
Sbjct: 144 MGDNRRNSMDSRNGLGLFTKKQIAGTSKFVFYPFNEMR 181
>sp|P0A1W2|LEP_SALTY Signal peptidase I OS=Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720) GN=lepB PE=3 SV=1
Length = 324
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 30 SIVPVRGSSMSPTFNLTTDSFMGSLS-DDYVLVEKFCL-------QKYKFS-----HGDV 76
+IV + S + F + + S M +L D++LVEKF QK GD+
Sbjct: 72 AIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDI 131
Query: 77 IVFCSPSNHKEKHVKRIIGLPGDWI 101
+VF P + K ++KR +GLPGD I
Sbjct: 132 VVFKYPEDPKLDYIKRAVGLPGDKI 156
>sp|P0A1W3|LEP_SALTI Signal peptidase I OS=Salmonella typhi GN=lepB PE=3 SV=1
Length = 324
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 30 SIVPVRGSSMSPTFNLTTDSFMGSLS-DDYVLVEKFCL-------QKYKFS-----HGDV 76
+IV + S + F + + S M +L D++LVEKF QK GD+
Sbjct: 72 AIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDI 131
Query: 77 IVFCSPSNHKEKHVKRIIGLPGDWI 101
+VF P + K ++KR +GLPGD I
Sbjct: 132 VVFKYPEDPKLDYIKRAVGLPGDKI 156
>sp|P71013|LEPT_BACSU Signal peptidase I T OS=Bacillus subtilis (strain 168) GN=sipT PE=1
SV=1
Length = 193
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 43/156 (27%)
Query: 34 VRGSSMSPTFNLTTDSFMGSLSDDYVLVEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
V GSSM PT + + + V K + GD+++ ++ K +VKR+
Sbjct: 47 VEGSSMYPTLH----------DGERLFVNKTVNYIGELKRGDIVIINGETS-KIHYVKRL 95
Query: 94 IGLPGDWI-----------------------------GTPMTNDV--MKVPNGHCWVEGD 122
IG PG+ + G +T D +KVP G +V GD
Sbjct: 96 IGKPGETVQMKDDTLYINGKKVAEPYLSKNKKEAEKLGVSLTGDFGPVKVPKGKYFVMGD 155
Query: 123 NPSSSLDSRS-FGPIPLGLIKGWVTHILWPPQRVRH 157
N +S+DSR+ G I I G + +P +R
Sbjct: 156 NRLNSMDSRNGLGLIAEDRIVGTSKFVFFPFNEMRQ 191
>sp|P00803|LEP_ECOLI Signal peptidase I OS=Escherichia coli (strain K12) GN=lepB PE=1
SV=2
Length = 324
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 30 SIVPVRGSSMSPTFNLTTDSFMGSLS-DDYVLVEKFCL-------QKYKFS-----HGDV 76
+IV + S + F + + S M +L D++LVEKF QK GD+
Sbjct: 72 AIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDI 131
Query: 77 IVFCSPSNHKEKHVKRIIGLPGDWI 101
+VF P + K ++KR +GLPGD +
Sbjct: 132 VVFKYPEDPKLDYIKRAVGLPGDKV 156
>sp|P26844|LEP_PSEFL Signal peptidase I OS=Pseudomonas fluorescens GN=lepB PE=3 SV=1
Length = 284
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 4 QNFLWSFTKNCFTFGLIGLTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVL--V 61
+ L + K+ F I L + + SM PT ++ + S L +
Sbjct: 56 EPLLVEYGKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLDVGDFILVNKFSYGIRLPVI 115
Query: 62 EKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVMKVPNGHCWVE 120
+K ++ GDV+VF PS+ ++KR++GLPGD + T+D NG E
Sbjct: 116 DKKVIEVGDPQRGDVMVFRYPSDPNVNYIKRVVGLPGDVVRY--TSDKRLFINGESVAE 172
>sp|P41025|LEP2_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipS2 PE=3 SV=1
Length = 193
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 69/185 (37%), Gaps = 43/185 (23%)
Query: 5 NFLWSFTKNCFTFGLIGLTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVLVEKF 64
N W + K + L I V GSSM PT + + + V K
Sbjct: 18 NTYWEWGKAIIIAVALALLIRHFLFEPYLVEGSSMYPTLH----------DGERLFVNKS 67
Query: 65 CLQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWI----------------------- 101
+ GD+++ ++ K +VKR+IG PG+ +
Sbjct: 68 VNYIGEIERGDIVIINGDTS-KVHYVKRLIGKPGETVEMKNDTLYINGKKIAEPYLASNK 126
Query: 102 ------GTPMTNDV--MKVPNGHCWVEGDNPSSSLDSRS-FGPIPLGLIKGWVTHILWPP 152
G +T D +KVP G +V GDN +S+DSR+ G I I G + +P
Sbjct: 127 KEAKKLGVNLTGDFGPVKVPKGKYFVMGDNRLNSMDSRNGLGLIAENRIVGTSKFVFFPF 186
Query: 153 QRVRH 157
+R
Sbjct: 187 HDMRQ 191
>sp|Q92JB1|LEP_RICCN Signal peptidase I OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=lepB PE=3 SV=1
Length = 266
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 24/100 (24%)
Query: 34 VRGSSMSPTFNLTTDSFMGS-LSDDYVLVEKFCLQKYKFS-------------------- 72
+R M P FN+ T S + L +DY+ K+ +S
Sbjct: 31 IRILIMEP-FNVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRIFAREPD 89
Query: 73 HGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVMKV 112
GD++VF P++ +++KR+IGLPGD I + +DV+ +
Sbjct: 90 RGDIVVFRPPNDMSVRYIKRLIGLPGDKI--QLIDDVIYI 127
>sp|Q4UKA7|LEP_RICFE Signal peptidase I OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=lepB PE=3 SV=1
Length = 266
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 72 SHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVMKV 112
GD++VF P++ +++KR+IGLPGD I + +DV+ +
Sbjct: 89 ERGDIVVFRPPNDMNVRYIKRLIGLPGDKI--QLIDDVIYI 127
>sp|Q8L2J7|LEP_RICTY Signal peptidase I OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=lepB PE=1 SV=1
Length = 264
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 72 SHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVMKV 112
GD++VF P++ +++KR+IGLPGD I + +DV+ +
Sbjct: 87 ERGDIVVFRPPNDMSVRYIKRLIGLPGDKI--QLIDDVIYI 125
>sp|Q9ZE32|LEP_RICPR Signal peptidase I OS=Rickettsia prowazekii (strain Madrid E)
GN=lepB PE=3 SV=1
Length = 264
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 72 SHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVMKV 112
GD++VF P++ +++KR+IGLPGD I + +DV+ +
Sbjct: 87 ERGDIVVFRPPNDMSVRYIKRLIGLPGDKI--QLIDDVIYI 125
>sp|A8GM78|LEP_RICAH Signal peptidase I OS=Rickettsia akari (strain Hartford) GN=lepB
PE=3 SV=1
Length = 266
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 72 SHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVMKV 112
GD++VF P++ +++KR+IGLPGD I + +DV+ +
Sbjct: 89 ERGDIVVFRPPNDMNVRYIKRLIGLPGDKI--QLIDDVIYI 127
>sp|A8GQT7|LEP_RICRS Signal peptidase I OS=Rickettsia rickettsii (strain Sheila Smith)
GN=lepB PE=1 SV=1
Length = 266
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 73 HGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVMKV 112
GD++VF P++ +++KR+IGLPGD I + +DV+ +
Sbjct: 90 RGDIVVFRPPNDMSVRYIKRLIGLPGDKI--QLIDDVIYI 127
>sp|A8EXI2|LEP_RICCK Signal peptidase I OS=Rickettsia canadensis (strain McKiel) GN=lepB
PE=3 SV=1
Length = 265
Score = 37.7 bits (86), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 72 SHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVMKV 112
GD++VF P++ +++KR+IGLPGD I + +D++ +
Sbjct: 88 ERGDIVVFRPPNDMSVRYIKRLIGLPGDKI--QLIDDIIYI 126
>sp|Q9I5G7|LEP_PSEAE Signal peptidase I OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=lepB PE=3 SV=1
Length = 284
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 22/113 (19%)
Query: 1 MAAQNFLWSFTKNCFTFGLIGLTISDRYASIVPVRGSSMSPTFNLTTDSFMGSLSDDYVL 60
+ + L + K+ F I L + + SM PT + D++L
Sbjct: 53 LNKEPLLVEYGKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLEV----------GDFIL 102
Query: 61 VEKFC------LQKYKF------SHGDVIVFCSPSNHKEKHVKRIIGLPGDWI 101
V KF + K GDV+VF PS ++KR++GLPGD +
Sbjct: 103 VNKFAYGIRLPVLDTKVIPIGDPQRGDVMVFRYPSEPNINYIKRVVGLPGDTV 155
>sp|A8F0M1|LEP_RICM5 Signal peptidase I OS=Rickettsia massiliae (strain Mtu5) GN=lepB
PE=3 SV=2
Length = 266
Score = 37.4 bits (85), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 72 SHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVMKV 112
GD++VF P + +++KR+IGLPGD I + +DV+ +
Sbjct: 89 ERGDIVVFRPPHDMSVRYIKRLIGLPGDKI--QLIDDVIYI 127
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,581,903
Number of Sequences: 539616
Number of extensions: 3154460
Number of successful extensions: 5648
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 5534
Number of HSP's gapped (non-prelim): 106
length of query: 170
length of database: 191,569,459
effective HSP length: 109
effective length of query: 61
effective length of database: 132,751,315
effective search space: 8097830215
effective search space used: 8097830215
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)