Your job contains 1 sequence.
>030853
MEVSLLSLSSSQNLTLKPSTNPLFHFHPSKRSKPPPTHIRAAISRTKKEETVDTVKTHLE
NCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNA
WLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGVGYWIGGDFAGSG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030853
(170 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2185051 - symbol:EMB3136 "AT5G13510" species:3... 485 3.0e-46 1
TAIR|locus:2092527 - symbol:AT3G12370 "AT3G12370" species... 365 1.5e-33 1
UNIPROTKB|P66044 - symbol:rplJ "50S ribosomal protein L10... 112 1.0e-06 1
UNIPROTKB|Q9KV32 - symbol:rplJ "50S ribosomal protein L10... 106 4.3e-06 1
TIGR_CMR|VC_0326 - symbol:VC_0326 "ribosomal protein L10"... 106 4.3e-06 1
TIGR_CMR|SPO_3510 - symbol:SPO_3510 "ribosomal protein L1... 100 0.00018 1
TIGR_CMR|BA_0099 - symbol:BA_0099 "ribosomal protein L10"... 99 0.00022 1
TIGR_CMR|CBU_0228 - symbol:CBU_0228 "ribosomal protein L1... 99 0.00028 1
UNIPROTKB|P0A7J3 - symbol:rplJ "50S ribosomal subunit pro... 97 0.00050 1
>TAIR|locus:2185051 [details] [associations]
symbol:EMB3136 "AT5G13510" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005840 "ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0009902 "chloroplast relocation" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010103
"stomatal complex morphogenesis" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR001790 Pfam:PF00466
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0009941
GO:GO:0042254 EMBL:AL391710 GO:GO:0022626 GO:GO:0019843
eggNOG:COG0244 EMBL:AY086884 IPI:IPI00541353 RefSeq:NP_196855.1
UniGene:At.32058 UniGene:At.69710 ProteinModelPortal:Q9FY50
SMR:Q9FY50 STRING:Q9FY50 PaxDb:Q9FY50 PRIDE:Q9FY50
EnsemblPlants:AT5G13510.1 GeneID:831195 KEGG:ath:AT5G13510
GeneFarm:80 TAIR:At5g13510 HOGENOM:HOG000241177 InParanoid:Q9FY50
KO:K02864 OMA:ELRGGVM PhylomeDB:Q9FY50 ProtClustDB:CLSN2684604
Genevestigator:Q9FY50 GermOnline:AT5G13510 InterPro:IPR022973
PANTHER:PTHR11560:SF8 Uniprot:Q9FY50
Length = 220
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 91/122 (74%), Positives = 102/122 (83%)
Query: 39 IRAAISRXXXXXXXXXXXXHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTL 98
IR+A+SR HLENCHL+AAI YKG TVKQFQDLRR+LP+ TKLIVAKNTL
Sbjct: 39 IRSAVSRNKKEETVEAVKSHLENCHLLAAINYKGLTVKQFQDLRRTLPDTTKLIVAKNTL 98
Query: 99 VYKAIEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGV 158
V+KAIEGT+WEALKPCM GMNAWLFV T+EIP+AIKPYR+FQKE+KLE NDFAGAVFEG
Sbjct: 99 VFKAIEGTKWEALKPCMKGMNAWLFVQTDEIPSAIKPYRSFQKERKLENNDFAGAVFEGK 158
Query: 159 GY 160
Y
Sbjct: 159 FY 160
>TAIR|locus:2092527 [details] [associations]
symbol:AT3G12370 "AT3G12370" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] InterPro:IPR001790 Pfam:PF00466
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0042254 GO:GO:0005840
EMBL:AP002047 EMBL:AC069474 eggNOG:COG0244 HOGENOM:HOG000241177
KO:K02864 ProtClustDB:CLSN2684604 InterPro:IPR022973
PANTHER:PTHR11560:SF8 EMBL:AY085935 EMBL:BT003736 EMBL:AK118387
IPI:IPI00521031 RefSeq:NP_187843.1 UniGene:At.39606
ProteinModelPortal:Q9LHH1 SMR:Q9LHH1 STRING:Q9LHH1 PaxDb:Q9LHH1
PRIDE:Q9LHH1 EnsemblPlants:AT3G12370.1 GeneID:820415
KEGG:ath:AT3G12370 TAIR:At3g12370 InParanoid:Q9LHH1 OMA:INLENCH
PhylomeDB:Q9LHH1 Genevestigator:Q9LHH1 Uniprot:Q9LHH1
Length = 171
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 69/101 (68%), Positives = 82/101 (81%)
Query: 58 HLENCHLIAAIKYKGFTVKQFQDLRRSLPENT--KLIVAKNTLVYKAIEGTQWEALKPCM 115
+LENCH I I Y G +VKQ Q+LR L ENT KL+VAKNTLVYKA+EGT+WE+LKPCM
Sbjct: 17 NLENCHFITGINYNGLSVKQLQELRGILRENTNTKLLVAKNTLVYKALEGTKWESLKPCM 76
Query: 116 SGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFE 156
GMNAWLFV +E+IPAA+K + NFQKEKKL +N+ GAVFE
Sbjct: 77 KGMNAWLFVQSEDIPAALKTFINFQKEKKLYDNNLGGAVFE 117
>UNIPROTKB|P66044 [details] [associations]
symbol:rplJ "50S ribosomal protein L10" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] HAMAP:MF_00362 InterPro:IPR001790 InterPro:IPR002363
Pfam:PF00466 PROSITE:PS01109 GO:GO:0005886 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0042254 GO:GO:0005840
EMBL:BX842574 GO:GO:0003735 eggNOG:COG0244 KO:K02864 OMA:ELRGGVM
InterPro:IPR022973 PANTHER:PTHR11560:SF8 HOGENOM:HOG000004852
ProtClustDB:PRK00099 PIR:H70614 RefSeq:NP_215165.1
RefSeq:NP_335091.1 RefSeq:YP_006513992.1 ProteinModelPortal:P66044
SMR:P66044 PRIDE:P66044 EnsemblBacteria:EBMYCT00000001927
EnsemblBacteria:EBMYCT00000070232 GeneID:13318537 GeneID:888049
GeneID:925963 KEGG:mtc:MT0680 KEGG:mtu:Rv0651 KEGG:mtv:RVBD_0651
PATRIC:18123217 TubercuList:Rv0651 Uniprot:P66044
Length = 178
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/76 (39%), Positives = 38/76 (50%)
Query: 69 KYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEE 128
+Y+G TV +LRRSL + VAKNTL+ +A E L G A FV E
Sbjct: 27 EYRGLTVANLAELRRSLTGSATYAVAKNTLIKRAASEAGIEGLDELFVGPTAIAFVTGEP 86
Query: 129 IPAAIKPYRNFQKEKK 144
+ AA K + F KE K
Sbjct: 87 VDAA-KAIKTFAKEHK 101
>UNIPROTKB|Q9KV32 [details] [associations]
symbol:rplJ "50S ribosomal protein L10" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] HAMAP:MF_00362 InterPro:IPR001790
InterPro:IPR002363 Pfam:PF00466 PROSITE:PS01109 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0244 KO:K02864 InterPro:IPR022973
PANTHER:PTHR11560:SF8 ProtClustDB:PRK00099 OMA:EGTDFEC PIR:D82336
RefSeq:NP_229980.1 ProteinModelPortal:Q9KV32 PRIDE:Q9KV32
DNASU:2615092 GeneID:2615092 KEGG:vch:VC0326 PATRIC:20079709
Uniprot:Q9KV32
Length = 162
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 33/90 (36%), Positives = 45/90 (50%)
Query: 71 KGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEEI 129
+G V +LR+ E L V +NTL +A+EGT +E LK G L + E
Sbjct: 31 RGVQVAAMTNLRKQAREAGVYLKVVRNTLARRAVEGTAYECLKDVFVGPT--LIGFSNEH 88
Query: 130 P-AAIKPYRNFQKEKKLEENDFAGAVFEGV 158
P AA + +++F KE K E A FEGV
Sbjct: 89 PGAAARLFKDFAKENKAFE--IKAAAFEGV 116
>TIGR_CMR|VC_0326 [details] [associations]
symbol:VC_0326 "ribosomal protein L10" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00362 InterPro:IPR001790 InterPro:IPR002363 Pfam:PF00466
PROSITE:PS01109 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0244 KO:K02864 InterPro:IPR022973 PANTHER:PTHR11560:SF8
ProtClustDB:PRK00099 OMA:EGTDFEC PIR:D82336 RefSeq:NP_229980.1
ProteinModelPortal:Q9KV32 PRIDE:Q9KV32 DNASU:2615092 GeneID:2615092
KEGG:vch:VC0326 PATRIC:20079709 Uniprot:Q9KV32
Length = 162
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 33/90 (36%), Positives = 45/90 (50%)
Query: 71 KGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEEI 129
+G V +LR+ E L V +NTL +A+EGT +E LK G L + E
Sbjct: 31 RGVQVAAMTNLRKQAREAGVYLKVVRNTLARRAVEGTAYECLKDVFVGPT--LIGFSNEH 88
Query: 130 P-AAIKPYRNFQKEKKLEENDFAGAVFEGV 158
P AA + +++F KE K E A FEGV
Sbjct: 89 PGAAARLFKDFAKENKAFE--IKAAAFEGV 116
>TIGR_CMR|SPO_3510 [details] [associations]
symbol:SPO_3510 "ribosomal protein L10" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00362 InterPro:IPR001790 InterPro:IPR002363 Pfam:PF00466
PROSITE:PS01109 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0244 KO:K02864 OMA:ELRGGVM InterPro:IPR022973
PANTHER:PTHR11560:SF8 HOGENOM:HOG000004852 ProtClustDB:PRK00099
RefSeq:YP_168705.2 ProteinModelPortal:Q5LMQ3 GeneID:3195233
KEGG:sil:SPO3510 PATRIC:23380491 Uniprot:Q5LMQ3
Length = 172
Score = 100 (40.3 bits), Expect = 0.00018, P = 0.00018
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 60 ENCHLIAAIKYKGFTVKQFQDLR-RSLPENTKLIVAKNTLVYKAIEGTQWEALKPCMSGM 118
E+ ++ Y G TV + QDLR R+ + VAKN L A+EG ++ ++GM
Sbjct: 18 ESSGVVVVAHYAGLTVAEMQDLRARAREAGGSVRVAKNRLAKIALEGKPCASMADLLTGM 77
Query: 119 NAWLFVHTEEIPAAIKPYRNFQKE-KKLE 146
+ ++E+ AA K F K+ KK E
Sbjct: 78 T--VLTYSEDPVAAAKVAEGFAKDNKKFE 104
>TIGR_CMR|BA_0099 [details] [associations]
symbol:BA_0099 "ribosomal protein L10" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00362 InterPro:IPR001790 InterPro:IPR002363 Pfam:PF00466
PROSITE:PS01109 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0042254 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0244 KO:K02864 OMA:ELRGGVM
InterPro:IPR022973 PANTHER:PTHR11560:SF8 RefSeq:NP_842667.1
RefSeq:YP_016703.1 RefSeq:YP_026385.1 ProteinModelPortal:Q81VU1
DNASU:1086413 EnsemblBacteria:EBBACT00000009447
EnsemblBacteria:EBBACT00000017734 EnsemblBacteria:EBBACT00000019911
GeneID:1086413 GeneID:2814893 GeneID:2852419 KEGG:ban:BA_0099
KEGG:bar:GBAA_0099 KEGG:bat:BAS0099 HOGENOM:HOG000004852
ProtClustDB:PRK00099 BioCyc:BANT260799:GJAJ-110-MONOMER
BioCyc:BANT261594:GJ7F-112-MONOMER Uniprot:Q81VU1
Length = 166
Score = 99 (39.9 bits), Expect = 0.00022, P = 0.00022
Identities = 28/91 (30%), Positives = 45/91 (49%)
Query: 68 IKYKGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHT 126
+ Y+G TV + +LR+ L E + V KN+L +A E + L ++G NA F +
Sbjct: 28 VDYRGLTVSEATELRKQLREAGVEFKVYKNSLTRRAAESAEMAELNEFLTGPNAIAFSN- 86
Query: 127 EEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
E++ A K +F K+ E + V EG
Sbjct: 87 EDVVAPAKVLNDFAKDH--EALEIKAGVIEG 115
>TIGR_CMR|CBU_0228 [details] [associations]
symbol:CBU_0228 "ribosomal protein L10" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] HAMAP:MF_00362 InterPro:IPR001790
InterPro:IPR002363 Pfam:PF00466 PROSITE:PS01109 GO:GO:0006412
GO:GO:0042254 GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0003735 eggNOG:COG0244 KO:K02864 OMA:ELRGGVM
InterPro:IPR022973 PANTHER:PTHR11560:SF8 ProtClustDB:PRK00099
HOGENOM:HOG000004851 RefSeq:NP_819272.1 ProteinModelPortal:Q83ET2
GeneID:1208109 KEGG:cbu:CBU_0228 PATRIC:17929147
BioCyc:CBUR227377:GJ7S-234-MONOMER Uniprot:Q83ET2
Length = 174
Score = 99 (39.9 bits), Expect = 0.00028, P = 0.00028
Identities = 30/87 (34%), Positives = 44/87 (50%)
Query: 67 AIKYKGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVH 125
A Y+G TV + DLR+S E + V +NTL +A + T + L+ ++G LF
Sbjct: 27 AADYRGLTVSEMSDLRKSAREARVHMRVYRNTLARRAFKETTYACLEEVLTGPIV-LFFS 85
Query: 126 TEEIPAAIKPYRNFQKE-KKLEENDFA 151
EE AA + F KE ++LE A
Sbjct: 86 QEEPGAAARLIEKFIKEHERLEVKGLA 112
>UNIPROTKB|P0A7J3 [details] [associations]
symbol:rplJ "50S ribosomal subunit protein L10"
species:83333 "Escherichia coli K-12" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] HAMAP:MF_00362
InterPro:IPR001790 InterPro:IPR002363 Pfam:PF00466 PROSITE:PS01109
GO:GO:0006417 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
GO:GO:0005840 EMBL:U00006 GO:GO:0003735 EMBL:V00339 eggNOG:COG0244
KO:K02864 InterPro:IPR022973 PANTHER:PTHR11560:SF8
ProtClustDB:PRK00099 HOGENOM:HOG000004851 OMA:EGTDFEC PIR:S12574
RefSeq:NP_418412.1 RefSeq:YP_491476.1 PDB:3J0T PDB:3J0W PDB:3J0Y
PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T
PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12 PDBsum:3J14
PDBsum:3SGF PDBsum:3UOS ProteinModelPortal:P0A7J3 SMR:P0A7J3
DIP:DIP-35816N IntAct:P0A7J3 MINT:MINT-1264502 PaxDb:P0A7J3
PRIDE:P0A7J3 EnsemblBacteria:EBESCT00000002708
EnsemblBacteria:EBESCT00000002709 EnsemblBacteria:EBESCT00000017699
GeneID:12930514 GeneID:948490 KEGG:ecj:Y75_p3212 KEGG:eco:b3985
PATRIC:32123491 EchoBASE:EB0864 EcoGene:EG10871
BioCyc:EcoCyc:EG10871-MONOMER BioCyc:ECOL316407:JW3948-MONOMER
Genevestigator:P0A7J3 Uniprot:P0A7J3
Length = 165
Score = 97 (39.2 bits), Expect = 0.00050, P = 0.00050
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 71 KGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEEI 129
+G TV + +LR++ E + V +NTL+ +A+EGT +E LK G L ++ E
Sbjct: 31 RGVTVDKMTELRKAGREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPT--LIAYSMEH 88
Query: 130 P-AAIKPYRNFQKEKKLEENDFAGAVFEG 157
P AA + ++ F K E A FEG
Sbjct: 89 PGAAARLFKEFAKANAKFE--VKAAAFEG 115
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 170 145 0.00071 103 3 11 22 0.46 31
30 0.49 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 598 (64 KB)
Total size of DFA: 159 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.32u 0.09s 15.41t Elapsed: 00:00:01
Total cpu time: 15.32u 0.09s 15.41t Elapsed: 00:00:01
Start: Fri May 10 00:37:12 2013 End: Fri May 10 00:37:13 2013