BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030853
(170 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FY50|RK10_ARATH 50S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana
GN=RPL10 PE=2 SV=1
Length = 220
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 99/122 (81%), Positives = 112/122 (91%)
Query: 39 IRAAISRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTL 98
IR+A+SR KKEETV+ VK+HLENCHL+AAI YKG TVKQFQDLRR+LP+ TKLIVAKNTL
Sbjct: 39 IRSAVSRNKKEETVEAVKSHLENCHLLAAINYKGLTVKQFQDLRRTLPDTTKLIVAKNTL 98
Query: 99 VYKAIEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGV 158
V+KAIEGT+WEALKPCM GMNAWLFV T+EIP+AIKPYR+FQKE+KLE NDFAGAVFEG
Sbjct: 99 VFKAIEGTKWEALKPCMKGMNAWLFVQTDEIPSAIKPYRSFQKERKLENNDFAGAVFEGK 158
Query: 159 GY 160
Y
Sbjct: 159 FY 160
>sp|O80362|RK10_TOBAC 50S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum
GN=RPL10 PE=2 SV=1
Length = 227
Score = 213 bits (542), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/155 (69%), Positives = 122/155 (78%), Gaps = 6/155 (3%)
Query: 6 LSLSSSQNLTLKPSTNPLFHFHPSKRSKPPPTHIRAAISRTKKEETVDTVKTHLENCHLI 65
SL S N +L T+P HF P ++ IR+AISRTKKEETV+TVK LE+C+L+
Sbjct: 18 FSLKSHFNNSLTLPTHP--HFKPKSKN----LTIRSAISRTKKEETVETVKQQLEDCYLL 71
Query: 66 AAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVH 125
A I YKG TVKQFQ+LR LP+ TKL+VAKNTLV KAIEGT+WEALKPCM GMNAWLFVH
Sbjct: 72 AGIGYKGLTVKQFQELRSQLPDTTKLLVAKNTLVLKAIEGTKWEALKPCMKGMNAWLFVH 131
Query: 126 TEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGVGY 160
+EEIPAA+KPYR FQKEKKLEENDF GAVFEG Y
Sbjct: 132 SEEIPAALKPYRTFQKEKKLEENDFTGAVFEGKFY 166
>sp|Q119S8|RL10_TRIEI 50S ribosomal protein L10 OS=Trichodesmium erythraeum (strain
IMS101) GN=rplJ PE=3 SV=1
Length = 190
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
Query: 44 SRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKA 102
S+ +KEE + +K +L L I Y+G +V + DLRR L P + +AKNTL+ A
Sbjct: 4 SKKQKEEMLAGIKQNLSESQLALVINYQGLSVAEITDLRRRLIPTGSICSIAKNTLMGIA 63
Query: 103 I-EGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ E + W+ ++ ++G NA+LF+ +I AIK Y++FQK K + +F G V EG
Sbjct: 64 VKEDSNWQPMEDLLAGSNAFLFLKN-DIGGAIKAYQDFQKATK--KTEFKGGVMEG 116
>sp|Q7V383|RL10_PROMP 50S ribosomal protein L10 OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=rplJ PE=3 SV=1
Length = 175
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG- 105
K++ V +K+ L++ + + YKG T+K+ DLR L N + V KN+L+ KAI+G
Sbjct: 8 KQKIVTEIKSLLDDSEMAVVLDYKGLTIKEMSDLRSRLQTNNGICKVTKNSLMRKAIDGN 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ W L+ ++G NA++ + E++ A+K ++FQKE K E GA+FEG
Sbjct: 68 SNWTDLESLLTGTNAFVLIK-EDVGGAVKAIQSFQKETKKSET--KGALFEG 116
>sp|A2BUH9|RL10_PROM5 50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT
9515) GN=rplJ PE=3 SV=1
Length = 175
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG- 105
K++ V +K+ L++ + + YKG T+K+ DLR L N + V KN+L+ KAI+G
Sbjct: 8 KQKIVTELKSLLDDSEMAVVLDYKGLTIKEMSDLRSRLQTNKGICKVTKNSLMRKAIDGN 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ W L+ ++G NA++ + E++ A+K ++FQKE K E GA+FEG
Sbjct: 68 SNWTDLESLLTGTNAFVLIK-EDVGGAVKAIQSFQKETKKSETK--GALFEG 116
>sp|A5GWK0|RL10_SYNR3 50S ribosomal protein L10 OS=Synechococcus sp. (strain RCC307)
GN=rplJ PE=3 SV=1
Length = 174
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGTQ 107
K++ V+ +K L + + YKG ++K+ DLR L N V KNTL+ +AI+G
Sbjct: 8 KQQIVEELKQLLGEAEMALVLDYKGLSIKEMSDLRGRLAANGICKVTKNTLMRRAIDGND 67
Query: 108 -WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
W L P ++G NA++ V ++ A+K ++FQK+ K +++ G +FEG
Sbjct: 68 TWSDLDPLLTGTNAFVLVKG-DVGGAVKAVQSFQKDSK--KSELKGGLFEG 115
>sp|A2BNZ7|RL10_PROMS 50S ribosomal protein L10 OS=Prochlorococcus marinus (strain
AS9601) GN=rplJ PE=3 SV=1
Length = 175
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG- 105
K++ V +K+ L++ + + YKG T+K+ DLR L + V KN+L+ KAI+G
Sbjct: 8 KQKIVTEIKSLLDDSEMAVVLDYKGLTIKEMSDLRSRLQTTNGICKVTKNSLMRKAIDGD 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ W L+ ++G NA++ + E++ A+K ++FQK+ K E GA+FEG
Sbjct: 68 SNWNDLESLLTGTNAFVLIK-EDVGGAVKAIQSFQKDTKKSET--KGALFEG 116
>sp|A3PAS0|RL10_PROM0 50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT
9301) GN=rplJ PE=3 SV=1
Length = 175
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG- 105
K++ V +K+ L + + + YKG T+K+ DLR L + V KN+L+ KAI+G
Sbjct: 8 KQQIVTEIKSLLNDSEMAVVLDYKGLTIKEMSDLRSRLQTTNGICKVTKNSLMRKAIDGD 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ W L+ ++G NA++ + E++ A+K ++FQK+ K E GA+FEG
Sbjct: 68 SNWNDLESLLTGTNAFVLIK-EDVGGAVKAIQSFQKDTKKSET--KGALFEG 116
>sp|A8G2K9|RL10_PROM2 50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT
9215) GN=rplJ PE=3 SV=1
Length = 175
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG- 105
K++ V +K+ L + + + YKG T+K+ DLR L + V KN+L+ KAI+G
Sbjct: 8 KQQIVTEIKSLLNDSEMAVVLDYKGLTIKEMSDLRSRLRTTNGICRVTKNSLMRKAIDGD 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ W L+ ++G NA++ + E++ A+K ++FQK+ K E GA+FEG
Sbjct: 68 SNWNDLESLLTGTNAFVLIK-EDVGGAVKAIQSFQKDTKKSET--KGALFEG 116
>sp|Q31CX9|RL10_PROM9 50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplJ PE=3 SV=1
Length = 175
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG- 105
K++ V +K+ L + + + YKG T+K+ DLR L + V KN+L+ KAI+G
Sbjct: 8 KQQIVTEIKSLLNDSEMAVVLDYKGLTIKEMSDLRSRLQTTNGICKVTKNSLMRKAIDGD 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ W L+ ++G NA++ + E++ A+K ++FQK+ K E GA+FEG
Sbjct: 68 SNWNDLESLLTGTNAFVLIK-EDVGGAVKAIQSFQKDTKKSET--KGALFEG 116
>sp|Q2JTQ3|RL10_SYNJA 50S ribosomal protein L10 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=rplJ PE=3 SV=1
Length = 187
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Query: 46 TKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAIE 104
KK E VD V++ L+ ++ I Y+G TV + LR L + + +V KNTL+ +A+
Sbjct: 7 AKKAEMVDEVRSLLQASQMVLVIDYRGLTVSEMNQLRAELRKADAVCMVVKNTLMRRAVA 66
Query: 105 GTQ-WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGVGYWI 162
+ W + P +SG A++ + + IPAA+K Y++F K+ K + +F GA EG+ +
Sbjct: 67 DQKAWAGILPFLSGPTAFIMIRGD-IPAALKAYQDFAKQTK--KTEFRGAAAEGLSLTL 122
>sp|B7KIR6|RL10_CYAP7 50S ribosomal protein L10 OS=Cyanothece sp. (strain PCC 7424)
GN=rplJ PE=3 SV=1
Length = 178
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 44 SRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKA 102
+R KE+ V +K L+ L I Y+G +V + DLRR + P +AKNTLV A
Sbjct: 4 TRENKEDVVADLKELLKESQLAVIIDYQGLSVAEITDLRRRIRPVGGTCKIAKNTLVRIA 63
Query: 103 IEGTQ-WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
++G Q W+ ++ + G +A L V E++ +K Y++FQK+ K + + G V EG
Sbjct: 64 VDGDQNWQPMQEYLKGSSAVLLVQ-EDVGGIVKAYKSFQKDSK--KTELRGGVMEG 116
>sp|A9BDG5|RL10_PROM4 50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT
9211) GN=rplJ PE=3 SV=1
Length = 175
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAIEG- 105
K++ V+ +K L+ + I Y+G T+K+ DLR L P + V KNTL+ KAI+G
Sbjct: 8 KKQIVEELKALLDQAEMALVIDYQGLTIKEMSDLRTRLGPSSGICKVTKNTLMRKAIDGD 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
T W +L+ ++G NA++ V ++ A+K + FQKE K ++ G +FEG
Sbjct: 68 TSWSSLESLLNGTNAFVLVKG-DVGGALKAVQAFQKETK--KSKTKGGLFEG 116
>sp|Q2JM49|RL10_SYNJB 50S ribosomal protein L10 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=rplJ PE=3 SV=1
Length = 187
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 46 TKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKL-IVAKNTLVYKAIE 104
KK E VD V++ L+ ++ I YKG TV + LR L ++ + +V KNTL+ +AI
Sbjct: 7 AKKAEIVDKVRSLLQASQMVLVIDYKGLTVAEMDQLRAELRKSDSVCMVVKNTLMRRAIA 66
Query: 105 GTQ-WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGV 158
+ W + P ++G A++ + +I AA+K Y++F K+ K + +F GA EG+
Sbjct: 67 DQKAWAGIIPFLAGPTAFILIRG-DISAALKAYQDFAKQTK--KTEFRGAGIEGL 118
>sp|B0JTA6|RL10_MICAN 50S ribosomal protein L10 OS=Microcystis aeruginosa (strain
NIES-843) GN=rplJ PE=3 SV=1
Length = 182
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 44 SRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKA 102
SR K ++ +KT L L I Y+G TV + +LRR L P T V KNTL+ A
Sbjct: 4 SRESKGVILEELKTSLSEAQLTMVIDYQGLTVAEISNLRRKLRPTGTICKVTKNTLMGLA 63
Query: 103 I-EGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVF 155
I E + WE +K +SG +A+L V E+I A K Y+ F+KE K + + G V
Sbjct: 64 IAEDSGWEPMKSLLSGTSAFLLVK-EDIGGAFKAYQEFKKESK--KTELRGGVL 114
>sp|Q3MA17|RL10_ANAVT 50S ribosomal protein L10 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rplJ PE=3 SV=1
Length = 181
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAIEGT 106
K+E V +K L L I+Y+G TV + DLRR L P T V KNTL+ AI+
Sbjct: 8 KKEIVADLKETLGESTLALVIEYQGLTVAEISDLRRRLRPSGTVCKVTKNTLMGIAIQDD 67
Query: 107 Q-WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ W+ L + G +A+L V E+ +AIK Y++FQK K + + G V EG
Sbjct: 68 EKWQPLSELLKGSSAFLLVK-EDFSSAIKAYQDFQKVTK--KTELRGGVMEG 116
>sp|Q3AGT1|RL10_SYNSC 50S ribosomal protein L10 OS=Synechococcus sp. (strain CC9605)
GN=rplJ PE=3 SV=1
Length = 175
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG- 105
K++ V +K L + L + +KG ++K+ DLR L + + V KNTL+ +AI+G
Sbjct: 8 KQQIVGELKELLADAELALVLDFKGLSIKEMSDLRDRLRASDSVCKVTKNTLMRRAIDGD 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ W +L ++G NA++ V ++ A +K + FQKE L++++ G +FEG
Sbjct: 68 SNWASLDSLLTGTNAFVLVKG-DVGAGVKAVQTFQKE--LKKSETKGGLFEG 116
>sp|Q7VDY7|RL10_PROMA 50S ribosomal protein L10 OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=rplJ PE=3 SV=1
Length = 175
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG- 105
K++ V+ +K L+ + + Y+G ++K+ DLR L +++ + V KNTL+ KAI G
Sbjct: 8 KKQIVEEIKGLLDKADMALVLDYQGLSIKEMSDLRSRLEQSSGICKVTKNTLMRKAINGD 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
W L+ ++G NA++ V ++ +A+K + FQKE K E G ++EG
Sbjct: 68 ATWSGLESLLNGTNAFVLVKG-DVGSALKAVQAFQKETKKSETK--GGLYEG 116
>sp|Q7NK77|RL10_GLOVI 50S ribosomal protein L10 OS=Gloeobacter violaceus (strain PCC
7421) GN=rplJ PE=3 SV=1
Length = 192
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 45 RTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAI 103
R KE V ++ LE ++ I Y+G +V + LRR + E +VAKNTL+ A
Sbjct: 4 RPVKEALVGDLQKLLEKSSVVMVIDYRGLSVAEITGLRRRMREHGGTCVVAKNTLMGVAT 63
Query: 104 EGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
T W + P ++G +A+LF E++ +K Y +F +E K + +F GAV +G
Sbjct: 64 RETAWRNIDPLLAGPSAFLF-GNEKLKEMLKTYEDFARETK--KTEFRGAVVDG 114
>sp|B1XJH0|RL10_SYNP2 50S ribosomal protein L10 OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rplJ PE=3 SV=1
Length = 175
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 44 SRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKA 102
S K+E V +K L++ L I YKG TV + DLR L P +AKNTL++ A
Sbjct: 4 SLADKQELVAEIKDLLKDAQLTFVIDYKGLTVAEITDLRNRLRPAGAYCKIAKNTLMHIA 63
Query: 103 IEGTQ-WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
++G + W+ ++ + +A+L + E++ +A+K Y+ F+K K + + G V EG
Sbjct: 64 VDGDETWQPVQSLLKDSSAFL-IAGEDVASAVKAYKEFRKATK--KTELRGGVMEG 116
>sp|A2C032|RL10_PROM1 50S ribosomal protein L10 OS=Prochlorococcus marinus (strain
NATL1A) GN=rplJ PE=3 SV=1
Length = 175
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG- 105
K++ V ++ L+N + + YKG + K+ DLR L ++ + V KNTL+ +AI+G
Sbjct: 8 KKQIVKKIEDLLDNSEMALVLDYKGLSTKEMSDLRSRLQQSDGVCKVTKNTLMRQAIKGK 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
W L ++G NA++ + ++ +A+K + FQKE ++++ G +FEG
Sbjct: 68 NSWTGLDSLLTGTNAFVLIKG-DVGSAVKAVQAFQKET--QKSETKGGLFEG 116
>sp|Q3AUJ7|RL10_SYNS9 50S ribosomal protein L10 OS=Synechococcus sp. (strain CC9902)
GN=rplJ PE=3 SV=2
Length = 175
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLP-ENTKLIVAKNTLVYKAIEG- 105
K++ V +K L L + +KG ++K+ DLR L N+ V KNTL+ +AI+G
Sbjct: 8 KQQIVGELKGLLAETELALVLDFKGLSIKEMSDLRDRLRVTNSVCKVTKNTLMRRAIDGD 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ W L ++G NA++ V ++ A +K R+FQ E K E GA+FEG
Sbjct: 68 SSWANLDSLLTGTNAFVLVKG-DVGAGVKAVRSFQNEFKKSET--KGALFEG 116
>sp|Q46HH1|RL10_PROMT 50S ribosomal protein L10 OS=Prochlorococcus marinus (strain
NATL2A) GN=rplJ PE=3 SV=1
Length = 175
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG- 105
K++ V ++ L+N + + YKG + K+ DLR L ++ + V KNTL+ +AI+G
Sbjct: 8 KKQIVKKIEDLLDNSEMALVLDYKGLSTKEMSDLRSRLQQSDGVCKVTKNTLMRQAIKGK 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
W L ++G NA++ + ++ +A+K + FQKE ++++ G +FEG
Sbjct: 68 NSWTGLDSLLTGTNAFVLIKG-DVGSAVKAVQAFQKET--QKSETKGGLFEG 116
>sp|Q0I6K9|RL10_SYNS3 50S ribosomal protein L10 OS=Synechococcus sp. (strain CC9311)
GN=rplJ PE=3 SV=1
Length = 175
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAIEG- 105
K++ V+ +K L + + Y+G ++K+ DLR L N V KNTL+ +AI+G
Sbjct: 8 KQQIVEELKKLLGEAEMALVLDYQGLSIKEMSDLRTRLQASNGVCKVTKNTLMRRAIDGD 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ W +L ++G NA++ + ++ A+K ++FQKE K E G +FEG
Sbjct: 68 SVWSSLDSLLNGTNAFVLIKG-DVGGAVKAVQSFQKETKKSETK--GGLFEG 116
>sp|Q7U3T8|RL10_SYNPX 50S ribosomal protein L10 OS=Synechococcus sp. (strain WH8102)
GN=rplJ PE=3 SV=1
Length = 175
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAIEG- 105
K++ V +K L L + YKG ++K+ DLR L N V KNTL+ +AI+G
Sbjct: 8 KQQIVGELKELLAESELALVLDYKGLSIKEMSDLRDRLRAGNAVCKVTKNTLMRRAIDGD 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ W L ++G NA++ + ++ A +K + FQKE K E G +FEG
Sbjct: 68 SAWSNLDSLLTGTNAFVLIKG-DVGAGVKAVQAFQKETKKSETK--GGLFEG 116
>sp|P23350|RL10_SYNY3 50S ribosomal protein L10 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rplJ PE=3 SV=1
Length = 173
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 44 SRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKA 102
+R K + V+ ++ + I Y+G TV + DLR L P +AKNTLV +A
Sbjct: 4 TRENKATVISDVQELFQDAQMTVIIDYQGLTVAEITDLRNRLRPLGGTCKIAKNTLVRRA 63
Query: 103 IEGTQ-WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ G + W ++ ++G A + V E++ AIK Y+ FQK+ K + + G V EG
Sbjct: 64 LAGQEAWSPMEEFLTGTTA-ILVLKEDLGGAIKAYKKFQKDTK--KTELRGGVLEG 116
>sp|Q8YLJ6|RL10_NOSS1 50S ribosomal protein L10 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplJ PE=3 SV=1
Length = 181
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAIEGT 106
K+E V +K L L I+Y+G TV + DLR+ L P T V KNTL+ AI+
Sbjct: 8 KKEIVADLKETLGESTLALVIEYQGLTVAEITDLRKRLRPSGTVCKVTKNTLMGIAIQDD 67
Query: 107 Q-WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ W+ L + G +A+L V E+ +AIK Y+ FQK K + + G V EG
Sbjct: 68 EKWQPLSELLKGSSAFLLVK-EDFSSAIKAYQEFQKVTK--KTELRGGVMEG 116
>sp|A5GPD3|RL10_SYNPW 50S ribosomal protein L10 OS=Synechococcus sp. (strain WH7803)
GN=rplJ PE=3 SV=1
Length = 175
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAIEG- 105
K++ V+ +K L + + Y+G ++K+ DLR L N V KNTL+ +AI+G
Sbjct: 8 KQQIVEELKQLLGEAEMALVLDYQGLSIKEMSDLRTRLQAANGVCKVTKNTLMRRAIDGD 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ W L ++G NA++ V ++ A+K + FQK+ K E G +FEG
Sbjct: 68 SAWSNLDSLLTGTNAFVLVKG-DVGGAVKAVQAFQKDTKKSETK--GGLFEG 116
>sp|B8HVL3|RL10_CYAP4 50S ribosomal protein L10 OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=rplJ PE=3 SV=1
Length = 175
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAIEGT 106
K+ V ++ L L I YKG TV + DLR+ L P T V KN + A++G
Sbjct: 8 KKSIVAELQETLSQSQLTLVIDYKGLTVAEITDLRKRLRPTGTLCKVTKNAFMRIAVDGN 67
Query: 107 Q-WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
Q W+ L+ +A+L V +++ AIK Y++FQK K + + G V EG
Sbjct: 68 QTWQPLQSFCQETSAFLLVK-DDLGGAIKAYQDFQKATK--KTELRGGVMEG 116
>sp|Q5N3N7|RL10_SYNP6 50S ribosomal protein L10 OS=Synechococcus sp. (strain ATCC 27144 /
PCC 6301 / SAUG 1402/1) GN=rplJ PE=3 SV=1
Length = 175
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAI-EG 105
K++ V +K ++ + + Y+G TV + DLR L N+ V KNTL+ +AI +
Sbjct: 8 KQDIVTELKGLVDEAQMAFVVDYQGLTVAEITDLRNRLEASNSVCKVTKNTLMRRAIADA 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
W+ L + G NA++ V ++ +AIK Y+ FQK+ K + + G + EG
Sbjct: 68 DDWQPLTELLKGTNAFVLVK-DDPGSAIKAYQAFQKDTK--KTELRGGLLEG 116
>sp|Q31QK5|RL10_SYNE7 50S ribosomal protein L10 OS=Synechococcus elongatus (strain PCC
7942) GN=rplJ PE=3 SV=1
Length = 175
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAI-EG 105
K++ V +K ++ + + Y+G TV + DLR L N+ V KNTL+ +AI +
Sbjct: 8 KQDIVTELKGLVDEAQMAFVVDYQGLTVAEITDLRNRLEASNSVCKVTKNTLMRRAIADA 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
W+ L + G NA++ V ++ +AIK Y+ FQK+ K + + G + EG
Sbjct: 68 DDWQPLTELLKGTNAFVLVK-DDPGSAIKAYQAFQKDTK--KTELRGGLLEG 116
>sp|B0CAD1|RL10_ACAM1 50S ribosomal protein L10 OS=Acaryochloris marina (strain MBIC
11017) GN=rplJ PE=3 SV=1
Length = 176
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAIEGT 106
K++ V ++ +L + + I Y+G TV + +LR L P + + KNTL+ +AI+G
Sbjct: 8 KKQIVAGLQENLSDTVMTIVIDYQGLTVAEITELRNKLRPAGAQCKITKNTLMRRAIKGD 67
Query: 107 Q-WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ WE L +S +A+L + +++ AIK Y+ FQK K + + G V +G
Sbjct: 68 EKWEPLSDWLSDSSAFLLIK-DDLGGAIKAYQAFQKATK--KTELRGGVMDG 116
>sp|Q7V477|RL10_PROMM 50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT
9313) GN=rplJ PE=3 SV=1
Length = 175
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAIEGT 106
K++ V+ +K L + + Y+G ++K+ DLR L N V KNTL+ AI G
Sbjct: 8 KQQIVEELKGLLGEAEMALVLDYQGLSIKEMSDLRTRLQASNGVCKVTKNTLMRHAINGN 67
Query: 107 -QWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
W L+ ++G NA++ + ++ A+K + FQK+ K E G +FEG
Sbjct: 68 GAWSNLESLLTGTNAFVLIKG-DVGGAVKAVQAFQKDTKKSETK--GGLFEG 116
>sp|A2CDE9|RL10_PROM3 50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT
9303) GN=rplJ PE=3 SV=1
Length = 175
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 48 KEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAIEGT 106
K++ V+ +K L + + Y+G ++K+ DLR L N V KNTL+ AI G
Sbjct: 8 KQQIVEELKGLLGEAEMALVLDYQGLSIKEMSDLRTRLQASNGVCKVTKNTLMRHAINGN 67
Query: 107 -QWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
W L+ ++G NA++ + ++ A+K + FQK+ K E G +FEG
Sbjct: 68 GAWSNLESLLTGTNAFVLIKG-DVGGAVKAVQAFQKDTKKSETK--GGLFEG 116
>sp|B1X074|RL10_CYAA5 50S ribosomal protein L10 OS=Cyanothece sp. (strain ATCC 51142)
GN=rplJ PE=3 SV=1
Length = 188
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Query: 44 SRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKA 102
+R K + +K L L I Y+G +V + +LR L P V KNTL+ +A
Sbjct: 4 TRENKATVIADLKELLSEAQLGMVIDYQGLSVAEITELRNRLRPSGAICKVTKNTLMEQA 63
Query: 103 IEGTQ-WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
I G + WE + + G +A++ V +++ +A++ Y++F+K+ K + +F G V +G
Sbjct: 64 ITGDEAWEPMTNFLKGSSAFVLVK-DDVGSAVRAYQSFKKDTK--KTEFRGGVMQG 116
>sp|B7GNG9|RL10_BIFLS 50S ribosomal protein L10 OS=Bifidobacterium longum subsp. infantis
(strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 /
S12) GN=rplJ PE=3 SV=1
Length = 173
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 43 ISRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKA 102
+ R +KE V + N + +Y+G TV Q DLR L +T VAKNTL A
Sbjct: 1 MKRPEKEAVVAQLTEEFRNADAVYLTEYRGLTVPQISDLREKLGRDTSYTVAKNTLARIA 60
Query: 103 IEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKK 144
+ E L +SG A FV + I AA K R+F K+ K
Sbjct: 61 AKEAGIEGLDEILSGPTAITFVKGDFIEAA-KVIRDFAKDNK 101
>sp|Q8G444|RL10_BIFLO 50S ribosomal protein L10 OS=Bifidobacterium longum (strain NCC
2705) GN=rplJ PE=3 SV=1
Length = 173
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 43 ISRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKA 102
+ R +KE V + N + +Y+G TV Q DLR L +T VAKNTL A
Sbjct: 1 MKRPEKEAVVAQLTEEFRNADAVYLTEYRGLTVPQISDLREKLGRDTSYTVAKNTLARIA 60
Query: 103 IEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKK 144
+ E L +SG A FV + I AA K R+F K+ K
Sbjct: 61 AKEAGIEGLDEILSGPTAITFVKGDFIEAA-KVIRDFAKDNK 101
>sp|B3DPX3|RL10_BIFLD 50S ribosomal protein L10 OS=Bifidobacterium longum (strain DJO10A)
GN=rplJ PE=3 SV=1
Length = 173
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 43 ISRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKA 102
+ R +KE V + N + +Y+G TV Q DLR L +T VAKNTL A
Sbjct: 1 MKRPEKEAVVAQLTEEFRNADAVYLTEYRGLTVPQISDLREKLGRDTSYTVAKNTLARIA 60
Query: 103 IEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKK 144
+ E L +SG A FV + I AA K R+F K+ K
Sbjct: 61 AKEAGIEGLDEILSGPTAITFVKGDFIEAA-KVIRDFAKDNK 101
>sp|B2GIJ3|RL10_KOCRD 50S ribosomal protein L10 OS=Kocuria rhizophila (strain ATCC 9341 /
DSM 348 / NBRC 103217 / DC2201) GN=rplJ PE=3 SV=1
Length = 177
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 47 KKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGT 106
+K V +K N H +Y+G TV Q + LRR+L EN + V KNTL A +
Sbjct: 5 EKAAAVAELKDLFSNSHAAVLTEYRGLTVAQLKTLRRALGENAEYAVVKNTLTAIAARES 64
Query: 107 QWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKE 142
EA + ++G +A FV + + AA K R+F K+
Sbjct: 65 GIEAFEGQLNGPSAIAFVSGDAVEAA-KSLRDFAKD 99
>sp|B8DVY4|RL10_BIFA0 50S ribosomal protein L10 OS=Bifidobacterium animalis subsp. lactis
(strain AD011) GN=rplJ PE=3 SV=1
Length = 173
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 43 ISRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKA 102
+ R +KE V + N + +Y+G TV Q DLR L +T VAKNTL A
Sbjct: 1 MKRPEKEAVVAELTEQFRNASAVYLTEYRGLTVPQISDLREKLGRDTSYTVAKNTLFRIA 60
Query: 103 IEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKK--LEENDFA-GAVFEGVG 159
+ E L + G +A +FV + I AA K R+F K K + + FA G V++ G
Sbjct: 61 AKEAGIEGLDEMLKGPSAVVFVDGDFIEAA-KVLRDFAKTNKALIVKGGFADGTVYDAEG 119
>sp|A7NRZ6|RL10_ROSCS 50S ribosomal protein L10 OS=Roseiflexus castenholzii (strain DSM
13941 / HLO8) GN=rplJ PE=3 SV=1
Length = 187
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 47 KKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPEN-TKLIVAKNTLVYKAIEG 105
+K ETV +K LE + Y+G +V DLR+ L E+ + +VAKNTL A
Sbjct: 5 RKIETVADLKQRLERMQVAVVADYRGLSVADMTDLRKKLRESGAEFVVAKNTLTRIAARE 64
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKK 144
T EA++P + G A F + +++P ++ F + K
Sbjct: 65 TGHEAIEPLLEGPTALAFAY-DDVPKFVRAINEFNRGPK 102
>sp|A1A032|RL10_BIFAA 50S ribosomal protein L10 OS=Bifidobacterium adolescentis (strain
ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) GN=rplJ
PE=3 SV=1
Length = 173
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 43 ISRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKA 102
+ R +KE V + N I +Y+G TV Q +LR L +T VAKNTLV A
Sbjct: 1 MKRPEKEAVVAQLTDKFRNADAIYLTEYRGLTVPQISELREKLGRDTSYTVAKNTLVRIA 60
Query: 103 IEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKK--LEENDFA-GAVFEGVG 159
+ E L ++G A FV + I AA K R+F K K + + FA G V++ G
Sbjct: 61 AKEAGIEGLDELLAGPTAVTFVKGDFIEAA-KTLRDFAKTNKALIIKGGFADGTVYDAEG 119
>sp|Q1GK51|RL10_RUEST 50S ribosomal protein L10 OS=Ruegeria sp. (strain TM1040) GN=rplJ
PE=3 SV=1
Length = 172
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 43 ISRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLR-RSLPENTKLIVAKNTLVYK 101
+ R +KE+ V+ + E+ ++ Y G TV + QDLR R+ + VAKN L
Sbjct: 1 MDRAQKEKVVEELGQIFESSGVVVVAHYTGLTVSEMQDLRARARDAGGSVRVAKNRLAKI 60
Query: 102 AIEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKK 144
A+EG E++ ++GM + ++E+ AA K +F KE K
Sbjct: 61 ALEGKPCESMSDLLTGMT--VLTYSEDPVAAAKVAEDFAKENK 101
>sp|Q8DM26|RL10_THEEB 50S ribosomal protein L10 OS=Thermosynechococcus elongatus (strain
BP-1) GN=rplJ PE=3 SV=1
Length = 178
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 39 IRAAISRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPE-NTKLIVAKNT 97
+R + K+E V +K L + I Y+G + + +DLR+ L + N V KNT
Sbjct: 2 MRVGRTLANKKEIVAELKERLRESQMALVIDYQGLSDAEMKDLRQRLRKCNASCKVTKNT 61
Query: 98 LVYKAI-EGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFE 156
L+ A+ E W+ + + G +A+L + ++I AIK Y+ FQK K + G V E
Sbjct: 62 LMELAVKESDTWQPITQFLKGPSAFLLLK-DDIGGAIKAYQEFQKATK--KTTLRGGVME 118
Query: 157 G 157
G
Sbjct: 119 G 119
>sp|A7HNY4|RL10_FERNB 50S ribosomal protein L10 OS=Fervidobacterium nodosum (strain ATCC
35602 / DSM 5306 / Rt17-B1) GN=rplJ PE=3 SV=1
Length = 181
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 43 ISRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPE----NTKLIVAKNTL 98
+ R +KE+ V + + +N L+ +KG TV Q +LRR+L E +L V KNTL
Sbjct: 2 LRRPEKEQLVQELTSEFQNSSLVLFTDFKGLTVAQMTNLRRALREKLGSGARLTVVKNTL 61
Query: 99 VYKAIE--GTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKK---------LEE 147
+ A++ G ++ + G A L+V + AIK + NF KE K LE
Sbjct: 62 LKMALKNSGYDVDSHESSFFGPTAVLYVTEGDPVEAIKVFYNFVKENKGTPVCKGLFLER 121
Query: 148 NDFAGAVFE 156
FAG E
Sbjct: 122 KFFAGEQLE 130
>sp|B2GAC5|RL10_LACF3 50S ribosomal protein L10 OS=Lactobacillus fermentum (strain NBRC
3956 / LMG 18251) GN=rplJ PE=3 SV=1
Length = 167
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 41 AAISRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPE-NTKLIVAKNTLV 99
AAI+ KK E V +V L + Y+G TV++ DLR+ L + N K+ V KN ++
Sbjct: 4 AAIA--KKAEEVKSVNAQLLAAESAIVVDYRGLTVEEVTDLRKQLRDANIKMSVIKNKIL 61
Query: 100 YKAIEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQK 141
+A+EGT +E LK G A F ++E P I P + +K
Sbjct: 62 ERAVEGTDYEDLKATFVGPTAVAF--SDEDP--IAPAKILKK 99
>sp|B7JWT6|RL10_CYAP8 50S ribosomal protein L10 OS=Cyanothece sp. (strain PCC 8801)
GN=rplJ PE=3 SV=1
Length = 189
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 44 SRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKA 102
+R K + +K L + L I Y+G +V + +LR L P + V KNT + A
Sbjct: 4 TRDNKAAVIADLKELLSDAQLAFVIDYQGLSVSEITELRNRLRPTGSICKVTKNTFMEMA 63
Query: 103 I-EGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+ E W+ + ++G +A++ V +++ A++ Y+ F+K+ K + +F G V +G
Sbjct: 64 VQEDDNWQPMTQFLTGSSAFVLVK-DDVGGAVRAYQGFKKDTK--KTEFRGGVMQG 116
>sp|Q38V10|RL10_LACSS 50S ribosomal protein L10 OS=Lactobacillus sakei subsp. sakei
(strain 23K) GN=rplJ PE=3 SV=1
Length = 167
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 47 KKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAIEG 105
KK + VDTV N I + Y+G TV+Q +LR+ L E ++ V KNT + +A +
Sbjct: 8 KKAQIVDTVVEKFNNAVSIVVMDYRGLTVEQVTELRKQLREAGVQMEVVKNTYLRRAADK 67
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEG 157
+E L +G A F E++ A K NF K E G + EG
Sbjct: 68 AGYEGLDDTFTGPTAVAF-SNEDVVAPAKIIANFSKSADALE--IKGGMIEG 116
>sp|A5UYI6|RL10_ROSS1 50S ribosomal protein L10 OS=Roseiflexus sp. (strain RS-1) GN=rplJ
PE=3 SV=1
Length = 186
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 47 KKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPEN-TKLIVAKNTLVYKAIEG 105
+K ETV +K L+ + Y+G +V +LR+ L E+ + +VAKNTL A
Sbjct: 5 RKIETVADLKQRLKRMQVTVVADYRGLSVADMTELRKKLRESGAEFVVAKNTLTLIAARE 64
Query: 106 TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKK 144
T EA++P ++G A F + +++P +K F + K
Sbjct: 65 TGHEAIEPLLAGPTALAFAY-DDVPKFVKAINEFNRGPK 102
>sp|Q6NJG6|RL10_CORDI 50S ribosomal protein L10 OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=rplJ PE=3
SV=1
Length = 171
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 47 KKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGT 106
K E++ +K + + +Y+G TV Q +LRR+L + + VAKNTL+ A +
Sbjct: 5 KNTESLAELKNRFADIDSVFVTEYRGLTVAQITELRRALGSDVQYSVAKNTLIKLAAKEA 64
Query: 107 QWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKK 144
E L ++G A F+ E + AA K + F E K
Sbjct: 65 GIEGLDDILTGPTAVAFIKGEAVDAA-KAMKKFASENK 101
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,403,543
Number of Sequences: 539616
Number of extensions: 2659681
Number of successful extensions: 7107
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 488
Number of HSP's that attempted gapping in prelim test: 6758
Number of HSP's gapped (non-prelim): 654
length of query: 170
length of database: 191,569,459
effective HSP length: 109
effective length of query: 61
effective length of database: 132,751,315
effective search space: 8097830215
effective search space used: 8097830215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)