Query 030858
Match_columns 170
No_of_seqs 123 out of 1369
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 05:38:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030858.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030858hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02473 glutathione S-transfe 100.0 1E-29 2.2E-34 177.1 17.3 162 2-164 51-212 (214)
2 PLN02395 glutathione S-transfe 100.0 2.2E-29 4.8E-34 175.6 17.5 163 2-165 50-212 (215)
3 PRK09481 sspA stringent starva 100.0 3.4E-28 7.3E-33 169.1 15.4 150 2-166 56-205 (211)
4 PRK10542 glutathionine S-trans 100.0 1.4E-27 3E-32 164.9 14.1 149 2-165 49-199 (201)
5 TIGR01262 maiA maleylacetoacet 100.0 4.5E-27 9.7E-32 163.4 16.0 156 2-165 49-206 (210)
6 PRK13972 GSH-dependent disulfi 100.0 2.2E-27 4.7E-32 165.5 13.4 154 2-167 49-209 (215)
7 PRK15113 glutathione S-transfe 99.9 9.8E-27 2.1E-31 162.1 14.0 156 2-167 56-212 (214)
8 PRK11752 putative S-transferas 99.9 1.1E-25 2.3E-30 161.1 16.0 155 2-165 98-260 (264)
9 PRK10357 putative glutathione 99.9 7E-26 1.5E-30 156.5 14.3 152 2-161 46-198 (202)
10 COG0625 Gst Glutathione S-tran 99.9 2.9E-25 6.3E-30 154.4 16.2 147 2-158 48-199 (211)
11 KOG0867 Glutathione S-transfer 99.9 2E-25 4.3E-30 156.1 14.0 160 2-165 51-211 (226)
12 PTZ00057 glutathione s-transfe 99.9 1.7E-24 3.6E-29 149.9 14.0 145 2-166 56-202 (205)
13 KOG0406 Glutathione S-transfer 99.9 3.8E-24 8.1E-29 146.6 13.2 152 2-165 56-213 (231)
14 KOG0868 Glutathione S-transfer 99.9 2.2E-23 4.7E-28 135.3 13.0 156 3-169 56-213 (217)
15 KOG1695 Glutathione S-transfer 99.9 3.4E-23 7.4E-28 140.9 13.8 153 1-166 48-203 (206)
16 TIGR00862 O-ClC intracellular 99.9 8.5E-23 1.8E-27 142.9 14.4 146 2-165 56-222 (236)
17 PLN02378 glutathione S-transfe 99.9 1.8E-22 4E-27 140.4 10.9 140 2-165 57-201 (213)
18 PRK10387 glutaredoxin 2; Provi 99.9 3E-22 6.5E-27 139.2 9.8 143 3-157 46-207 (210)
19 PLN02817 glutathione dehydroge 99.9 1.3E-21 2.8E-26 139.7 12.0 139 2-164 110-252 (265)
20 PLN02907 glutamate-tRNA ligase 99.9 7.2E-21 1.6E-25 150.9 14.3 135 2-167 35-176 (722)
21 TIGR02182 GRXB Glutaredoxin, G 99.8 7.1E-20 1.5E-24 127.1 7.8 144 2-157 44-206 (209)
22 cd03187 GST_C_Phi GST_C family 99.8 2.7E-18 5.9E-23 108.8 10.9 117 44-161 2-118 (118)
23 cd03178 GST_C_Ure2p_like GST_C 99.8 5.4E-18 1.2E-22 106.7 10.2 112 44-161 1-112 (113)
24 cd03196 GST_C_5 GST_C family, 99.8 4.7E-18 1E-22 107.2 8.5 113 40-160 2-114 (115)
25 cd03188 GST_C_Beta GST_C famil 99.8 4.4E-18 9.5E-23 107.2 7.8 113 44-161 2-114 (114)
26 KOG4420 Uncharacterized conser 99.7 1.6E-17 3.4E-22 114.3 9.9 160 3-164 76-288 (325)
27 cd03190 GST_C_ECM4_like GST_C 99.7 4.9E-17 1.1E-21 106.3 10.1 114 43-166 3-121 (142)
28 cd03183 GST_C_Theta GST_C fami 99.7 8.5E-17 1.8E-21 103.1 10.8 117 45-163 2-122 (126)
29 cd03191 GST_C_Zeta GST_C famil 99.7 7.5E-17 1.6E-21 102.7 10.2 116 43-163 2-119 (121)
30 cd03180 GST_C_2 GST_C family, 99.7 1.7E-16 3.8E-21 99.2 11.3 109 44-157 2-110 (110)
31 cd03186 GST_C_SspA GST_N famil 99.7 1E-16 2.3E-21 99.8 10.0 105 43-160 2-106 (107)
32 cd03185 GST_C_Tau GST_C family 99.7 6.4E-17 1.4E-21 103.6 9.3 112 43-165 2-117 (126)
33 cd03181 GST_C_EFB1gamma GST_C 99.7 8.1E-17 1.7E-21 102.8 8.9 118 45-166 2-119 (123)
34 cd03182 GST_C_GTT2_like GST_C 99.7 1.7E-16 3.7E-21 100.4 9.9 115 41-157 1-117 (117)
35 cd03189 GST_C_GTT1_like GST_C 99.7 3.7E-16 8.1E-21 99.1 10.8 114 39-155 2-119 (119)
36 cd03209 GST_C_Mu GST_C family, 99.7 4.2E-16 9E-21 99.2 9.8 113 44-168 2-114 (121)
37 cd03177 GST_C_Delta_Epsilon GS 99.7 4.4E-16 9.5E-21 98.7 9.4 112 44-164 2-113 (118)
38 cd03208 GST_C_Alpha GST_C fami 99.7 1.2E-15 2.7E-20 99.0 10.4 78 87-166 39-118 (137)
39 cd03210 GST_C_Pi GST_C family, 99.7 1.4E-15 3.1E-20 97.4 9.4 83 84-168 32-117 (126)
40 cd03184 GST_C_Omega GST_C fami 99.6 1.2E-15 2.7E-20 97.5 7.9 110 44-166 2-116 (124)
41 cd03207 GST_C_8 GST_C family, 99.6 1.4E-15 3.1E-20 94.1 6.2 75 85-163 28-102 (103)
42 PF13410 GST_C_2: Glutathione 99.6 5.5E-15 1.2E-19 84.8 7.2 68 83-150 2-69 (69)
43 cd03179 GST_C_1 GST_C family, 99.6 2.6E-15 5.6E-20 93.1 6.2 104 44-152 2-105 (105)
44 PF00043 GST_C: Glutathione S- 99.6 5.7E-15 1.2E-19 90.0 7.6 73 82-155 23-95 (95)
45 cd03195 GST_C_4 GST_C family, 99.6 4.2E-15 9E-20 93.6 6.7 111 43-163 2-113 (114)
46 cd03206 GST_C_7 GST_C family, 99.6 9.4E-15 2E-19 89.9 8.1 99 49-157 2-100 (100)
47 cd03198 GST_C_CLIC GST_C famil 99.6 9E-15 2E-19 93.6 7.9 86 79-164 21-125 (134)
48 KOG4244 Failed axon connection 99.6 3.1E-14 6.6E-19 98.6 10.7 146 3-154 92-273 (281)
49 cd03203 GST_C_Lambda GST_C fam 99.6 8.5E-14 1.8E-18 88.4 10.2 106 41-164 1-112 (120)
50 cd03204 GST_C_GDAP1 GST_C fami 99.5 3.2E-14 7E-19 88.4 7.8 79 79-157 21-111 (111)
51 cd03194 GST_C_3 GST_C family, 99.5 1.2E-13 2.6E-18 86.9 10.0 70 87-162 41-113 (114)
52 cd03200 GST_C_JTV1 GST_C famil 99.5 5.1E-14 1.1E-18 85.8 7.7 95 22-153 1-95 (96)
53 cd03201 GST_C_DHAR GST_C famil 99.5 3.8E-14 8.3E-19 90.0 6.3 80 86-165 29-112 (121)
54 COG0435 ECM4 Predicted glutath 99.5 6.7E-14 1.4E-18 97.4 5.8 148 4-163 129-286 (324)
55 cd00299 GST_C_family Glutathio 99.5 1.3E-13 2.8E-18 84.4 6.4 99 49-151 2-100 (100)
56 KOG1422 Intracellular Cl- chan 99.5 4.3E-13 9.4E-18 89.9 8.5 143 3-165 59-207 (221)
57 KOG2903 Predicted glutathione 99.4 6E-13 1.3E-17 91.9 6.4 148 3-162 122-287 (319)
58 PF14497 GST_C_3: Glutathione 99.3 2.1E-12 4.6E-17 79.2 5.5 65 84-153 32-99 (99)
59 cd03193 GST_C_Metaxin GST_C fa 99.3 4.4E-12 9.5E-17 76.1 6.7 68 85-152 17-88 (88)
60 cd03192 GST_C_Sigma_like GST_C 99.3 4.9E-12 1.1E-16 78.2 7.0 100 44-151 2-104 (104)
61 cd03202 GST_C_etherase_LigE GS 99.3 6.1E-12 1.3E-16 80.3 7.4 68 85-153 56-123 (124)
62 KOG3027 Mitochondrial outer me 99.3 3.9E-11 8.4E-16 80.4 9.7 147 3-153 66-247 (257)
63 cd03205 GST_C_6 GST_C family, 99.3 2.9E-11 6.2E-16 74.0 7.0 71 78-151 28-98 (98)
64 PF14834 GST_C_4: Glutathione 99.2 1.7E-10 3.7E-15 70.5 9.7 114 41-164 1-115 (117)
65 cd03211 GST_C_Metaxin2 GST_C f 99.2 1.4E-11 3.1E-16 78.8 4.9 69 84-152 54-126 (126)
66 cd03212 GST_C_Metaxin1_3 GST_C 99.2 8.3E-11 1.8E-15 76.2 6.6 72 82-153 59-134 (137)
67 KOG3029 Glutathione S-transfer 99.1 6.2E-10 1.3E-14 78.1 8.1 49 104-153 306-354 (370)
68 cd03197 GST_C_mPGES2 GST_C fam 98.9 3.4E-09 7.3E-14 68.8 6.5 51 102-153 95-145 (149)
69 KOG3028 Translocase of outer m 98.9 7.4E-08 1.6E-12 68.9 11.6 148 3-153 48-233 (313)
70 COG2999 GrxB Glutaredoxin 2 [P 98.7 4.9E-08 1.1E-12 64.2 6.2 143 4-157 47-207 (215)
71 cd03075 GST_N_Mu GST_N family, 98.7 1.6E-08 3.4E-13 59.8 3.4 28 2-29 55-82 (82)
72 cd03077 GST_N_Alpha GST_N fami 98.7 2E-08 4.3E-13 58.9 3.7 29 2-30 49-77 (79)
73 PF13417 GST_N_3: Glutathione 98.6 6.4E-08 1.4E-12 56.1 4.0 30 2-31 44-73 (75)
74 cd03046 GST_N_GTT1_like GST_N 98.5 1.1E-07 2.3E-12 55.2 3.7 29 2-30 48-76 (76)
75 cd03050 GST_N_Theta GST_N fami 98.5 1.6E-07 3.4E-12 54.6 3.6 28 2-29 49-76 (76)
76 cd03080 GST_N_Metaxin_like GST 98.5 1.5E-07 3.2E-12 54.6 3.5 29 2-30 47-75 (75)
77 cd03048 GST_N_Ure2p_like GST_N 98.5 2.4E-07 5.1E-12 54.5 3.7 30 2-31 49-81 (81)
78 PF02798 GST_N: Glutathione S- 98.4 2.4E-07 5.2E-12 53.9 3.5 25 3-27 51-76 (76)
79 cd03057 GST_N_Beta GST_N famil 98.4 2.4E-07 5.2E-12 53.9 3.5 29 2-30 48-77 (77)
80 cd03038 GST_N_etherase_LigE GS 98.4 2.4E-07 5.3E-12 54.9 3.2 29 2-30 55-84 (84)
81 cd03061 GST_N_CLIC GST_N famil 98.4 3.4E-07 7.3E-12 54.8 3.6 30 2-31 59-88 (91)
82 cd03076 GST_N_Pi GST_N family, 98.4 2.6E-07 5.7E-12 53.2 2.9 27 2-28 47-73 (73)
83 cd03079 GST_N_Metaxin2 GST_N f 98.4 3.2E-07 7E-12 52.7 2.9 26 3-28 49-74 (74)
84 cd03058 GST_N_Tau GST_N family 98.4 4.3E-07 9.2E-12 52.4 3.4 27 3-29 48-74 (74)
85 cd03052 GST_N_GDAP1 GST_N fami 98.4 2.9E-07 6.4E-12 53.0 2.6 25 2-26 49-73 (73)
86 cd03059 GST_N_SspA GST_N famil 98.4 5.2E-07 1.1E-11 51.8 3.6 28 2-29 46-73 (73)
87 PF13409 GST_N_2: Glutathione 98.3 9.4E-07 2E-11 50.5 3.4 26 2-27 43-69 (70)
88 cd03039 GST_N_Sigma_like GST_N 98.3 7.9E-07 1.7E-11 51.0 2.8 26 2-27 47-72 (72)
89 cd03053 GST_N_Phi GST_N family 98.3 9.4E-07 2E-11 51.2 3.1 27 2-28 50-76 (76)
90 cd03041 GST_N_2GST_N GST_N fam 98.2 1.3E-06 2.8E-11 50.8 3.5 27 3-29 49-77 (77)
91 cd03045 GST_N_Delta_Epsilon GS 98.2 1.1E-06 2.4E-11 50.6 3.0 26 2-27 49-74 (74)
92 cd03047 GST_N_2 GST_N family, 98.2 1.1E-06 2.4E-11 50.6 2.7 25 2-26 49-73 (73)
93 cd03040 GST_N_mPGES2 GST_N fam 98.1 2.8E-06 6E-11 49.4 3.3 28 3-30 46-77 (77)
94 cd03043 GST_N_1 GST_N family, 98.1 2.5E-06 5.3E-11 49.1 2.7 25 2-26 49-73 (73)
95 cd03042 GST_N_Zeta GST_N famil 98.1 2.7E-06 6E-11 48.7 2.6 25 2-26 49-73 (73)
96 cd03054 GST_N_Metaxin GST_N fa 98.0 4.4E-06 9.6E-11 47.9 2.9 27 2-28 46-72 (72)
97 cd03044 GST_N_EF1Bgamma GST_N 98.0 4.4E-06 9.5E-11 48.3 2.7 26 2-27 48-74 (75)
98 cd03056 GST_N_4 GST_N family, 98.0 4.9E-06 1.1E-10 47.7 2.7 25 2-26 49-73 (73)
99 cd03037 GST_N_GRX2 GST_N famil 98.0 4.5E-06 9.7E-11 47.7 2.5 25 3-27 46-71 (71)
100 cd03049 GST_N_3 GST_N family, 97.9 8.5E-06 1.8E-10 46.8 2.0 25 2-26 48-73 (73)
101 cd03060 GST_N_Omega_like GST_N 97.9 1.4E-05 3E-10 45.7 2.7 24 2-25 46-70 (71)
102 PF04399 Glutaredoxin2_C: Glut 97.8 7.4E-05 1.6E-09 47.8 5.7 68 85-157 57-124 (132)
103 cd03051 GST_N_GTT2_like GST_N 97.8 1.3E-05 2.9E-10 45.9 2.1 25 2-26 49-74 (74)
104 cd00570 GST_N_family Glutathio 97.6 4.4E-05 9.5E-10 42.8 2.6 25 2-26 47-71 (71)
105 cd03199 GST_C_GRX2 GST_C famil 97.5 0.00039 8.4E-09 44.2 6.0 67 86-157 59-125 (128)
106 KOG1147 Glutamyl-tRNA syntheta 97.5 5.7E-05 1.2E-09 58.3 2.6 73 89-161 90-162 (712)
107 cd03078 GST_N_Metaxin1_like GS 97.5 0.00015 3.2E-09 41.7 3.1 26 3-28 47-72 (73)
108 PF10568 Tom37: Outer mitochon 94.8 0.035 7.6E-07 31.7 2.7 23 3-25 48-71 (72)
109 PF11801 Tom37_C: Tom37 C-term 94.3 0.068 1.5E-06 35.9 3.5 38 92-129 113-154 (168)
110 cd03029 GRX_hybridPRX5 Glutare 88.9 0.45 9.7E-06 26.8 2.4 24 3-26 49-72 (72)
111 KOG1668 Elongation factor 1 be 85.0 1.2 2.7E-05 31.3 3.2 59 93-158 10-68 (231)
112 TIGR02183 GRXA Glutaredoxin, G 84.6 1.6 3.5E-05 25.6 3.2 28 3-30 56-83 (86)
113 PF09635 MetRS-N: MetRS-N bind 83.8 0.66 1.4E-05 29.2 1.3 26 6-31 37-64 (122)
114 PRK11200 grxA glutaredoxin 1; 82.0 2.6 5.7E-05 24.5 3.4 28 3-30 57-84 (85)
115 TIGR02196 GlrX_YruB Glutaredox 73.7 5 0.00011 22.0 2.8 23 3-25 49-73 (74)
116 cd02066 GRX_family Glutaredoxi 60.8 12 0.00026 20.1 2.7 22 3-24 49-70 (72)
117 PRK10638 glutaredoxin 3; Provi 54.6 19 0.0004 20.7 2.8 24 3-26 51-74 (83)
118 cd03418 GRX_GRXb_1_3_like Glut 51.4 22 0.00047 19.7 2.8 22 4-25 51-72 (75)
119 TIGR02681 phage_pRha phage reg 51.4 16 0.00035 22.6 2.3 27 5-31 2-29 (108)
120 cd03419 GRX_GRXh_1_2_like Glut 47.9 27 0.00058 19.7 2.8 25 3-27 52-76 (82)
121 TIGR02180 GRX_euk Glutaredoxin 47.2 30 0.00064 19.5 2.9 25 3-27 53-77 (84)
122 TIGR01764 excise DNA binding d 43.3 40 0.00087 16.5 2.8 24 3-26 25-48 (49)
123 PF11732 Thoc2: Transcription- 38.8 53 0.0011 19.0 2.9 34 118-152 43-76 (77)
124 TIGR02181 GRX_bact Glutaredoxi 33.7 60 0.0013 18.1 2.8 25 3-27 48-72 (79)
125 cd02976 NrdH NrdH-redoxin (Nrd 32.9 39 0.00084 18.1 1.8 16 3-18 49-64 (73)
126 PF09098 Dehyd-heme_bind: Quin 30.0 38 0.00082 22.8 1.6 14 17-30 55-68 (167)
127 PRK15371 effector protein YopJ 29.1 2.4E+02 0.0053 21.0 5.8 43 86-129 22-64 (287)
128 PF04763 DUF562: Protein of un 29.0 33 0.00072 22.3 1.1 48 102-153 97-144 (146)
129 PHA02776 E7 protein; Provision 26.9 30 0.00065 21.2 0.6 13 109-121 1-13 (101)
130 PF00392 GntR: Bacterial regul 26.8 82 0.0018 17.0 2.4 29 93-121 3-32 (64)
131 PF04564 U-box: U-box domain; 24.3 1E+02 0.0022 17.3 2.5 24 5-29 16-39 (73)
132 PF07862 Nif11: Nitrogen fixat 24.1 1.1E+02 0.0023 15.6 2.4 22 142-163 4-25 (49)
133 PF10022 DUF2264: Uncharacteri 24.0 1.4E+02 0.0031 22.9 3.9 100 10-121 103-206 (361)
134 KOG0095 GTPase Rab30, small G 23.7 86 0.0019 20.9 2.3 34 90-123 96-131 (213)
135 PF10990 DUF2809: Protein of u 22.8 48 0.001 19.8 1.0 17 107-123 71-87 (91)
136 PF13227 DUF4035: Protein of u 22.4 47 0.001 17.7 0.8 12 111-122 30-41 (53)
137 PF03421 YopJ: YopJ Serine/Thr 21.9 2.7E+02 0.0058 19.0 5.1 38 91-129 3-40 (177)
138 cd06891 PX_Vps17p The phosphoi 21.7 62 0.0013 21.2 1.4 19 141-159 111-129 (140)
139 PF11216 DUF3012: Protein of u 21.3 83 0.0018 14.8 1.4 12 145-156 4-15 (32)
140 COG3646 Uncharacterized phage- 20.9 62 0.0013 21.8 1.3 24 8-31 7-30 (167)
141 COG4545 Glutaredoxin-related p 20.5 1.5E+02 0.0033 17.2 2.6 46 123-168 17-65 (85)
142 TIGR02200 GlrX_actino Glutared 20.4 71 0.0015 17.4 1.4 18 2-19 49-67 (77)
143 cd03028 GRX_PICOT_like Glutare 20.3 1.6E+02 0.0035 17.1 2.9 22 4-25 63-84 (90)
144 PF12728 HTH_17: Helix-turn-he 20.1 1.4E+02 0.003 15.0 3.1 25 3-27 25-49 (51)
No 1
>PLN02473 glutathione S-transferase
Probab=99.97 E-value=1e-29 Score=177.14 Aligned_cols=162 Identities=40% Similarity=0.731 Sum_probs=128.2
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQD 81 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (170)
.|+||+|+++|.+|+||.||++||++++++.+ .++.|.++.+++++++|+.+..+.+.+.+........+.+..+...+
T Consensus 51 ~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~-~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (214)
T PLN02473 51 FGQVPAIEDGDLKLFESRAIARYYATKYADQG-TDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCD 129 (214)
T ss_pred CCCCCeEEECCEEEEehHHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCC
Confidence 48999999999999999999999999998642 24889999999999999998877776544333333333332233344
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHH
Q 030858 82 EGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVV 161 (170)
Q Consensus 82 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 161 (170)
....+.....+.+.++.+|+.|++++|++|+++|+||+++++.+.++..........+.+|+|.+|+++|.+||++++++
T Consensus 130 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~ 209 (214)
T PLN02473 130 VALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLM 209 (214)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcChhhHHHH
Confidence 45566777889999999999999889999999999999999998776532221123578999999999999999999998
Q ss_pred HHH
Q 030858 162 DMQ 164 (170)
Q Consensus 162 ~~~ 164 (170)
.+.
T Consensus 210 ~~~ 212 (214)
T PLN02473 210 ELA 212 (214)
T ss_pred HHh
Confidence 764
No 2
>PLN02395 glutathione S-transferase
Probab=99.97 E-value=2.2e-29 Score=175.56 Aligned_cols=163 Identities=42% Similarity=0.730 Sum_probs=128.8
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQD 81 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (170)
.|+||+|+++|.+|+||.+|++||+++++..+ ..++|.++.++++++.|+.+....+.+.+........+.+..+....
T Consensus 50 ~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~-~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (215)
T PLN02395 50 FGVVPVIVDGDYKIFESRAIMRYYAEKYRSQG-PDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPAD 128 (215)
T ss_pred CCCCCEEEECCEEEEcHHHHHHHHHHHcCCCC-cCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCc
Confidence 48999999999999999999999999998632 24899999999999999999888777665554443333222122333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHH
Q 030858 82 EGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVV 161 (170)
Q Consensus 82 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 161 (170)
....+.....+.+.++.+|+.|++++|++|+++|+||+++++++.++.........++.+|+|.+|+++|.++|++++++
T Consensus 129 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~ 208 (215)
T PLN02395 129 EKVIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWKEVL 208 (215)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHHHHH
Confidence 44556778889999999999999889999999999999999988776432111124677999999999999999999998
Q ss_pred HHHh
Q 030858 162 DMQK 165 (170)
Q Consensus 162 ~~~~ 165 (170)
.+..
T Consensus 209 ~~~~ 212 (215)
T PLN02395 209 AKYS 212 (215)
T ss_pred HHhc
Confidence 8654
No 3
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.96 E-value=3.4e-28 Score=169.10 Aligned_cols=150 Identities=17% Similarity=0.188 Sum_probs=118.3
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQD 81 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (170)
.|+||+|+++|.+|+||.||++||++++++. .|.|.++.+++.++.|+.+....+...... . . ...
T Consensus 56 ~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~---~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~-----~-~-----~~~ 121 (211)
T PRK09481 56 YQSVPTLVDRELTLYESRIIMEYLDERFPHP---PLMPVYPVARGESRLMMHRIEKDWYSLMNK-----I-V-----NGS 121 (211)
T ss_pred CCCCCEEEECCEEeeCHHHHHHHHHHhCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-----H-h-----cCC
Confidence 5899999999999999999999999999863 489999999999999988765433221111 1 0 112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHH
Q 030858 82 EGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVV 161 (170)
Q Consensus 82 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 161 (170)
+...+.....+...++.+|++|++++|++|+++|+||+++++.+.++...... .....+|+|.+|+++|.+||++++++
T Consensus 122 ~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~~~~-~~~~~~p~l~~w~~~~~~rp~~~~~~ 200 (211)
T PRK09481 122 ASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVLGIE-LSGPGAKELKGYMTRVFERDSFLASL 200 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhcCCC-CCCCCChhHHHHHHHHhccHHHHHHc
Confidence 33456677788899999999999999999999999999999999777543322 11257999999999999999999998
Q ss_pred HHHhh
Q 030858 162 DMQKQ 166 (170)
Q Consensus 162 ~~~~~ 166 (170)
.....
T Consensus 201 ~~~~~ 205 (211)
T PRK09481 201 TEAER 205 (211)
T ss_pred CHHHH
Confidence 76543
No 4
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.96 E-value=1.4e-27 Score=164.89 Aligned_cols=149 Identities=15% Similarity=0.259 Sum_probs=117.8
Q ss_pred Cccceeee-eCCeEEechhHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCC
Q 030858 2 IHLYLVLG-FNHVILSESRAICRYVCENYPEKGNKGLF-GTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIK 79 (170)
Q Consensus 2 ~~~vP~L~-~~~~~l~eS~aI~~yL~~~~~~~~~~~l~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (170)
.|+||+|+ ++|.+|+||.+|++||++++++. .++ |.++.+++++++|+.+..+.+.+.+... +. ..
T Consensus 49 ~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~~---~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~-----~~----~~ 116 (201)
T PRK10542 49 KGQVPALLLDDGTLLTEGVAIMQYLADSVPDR---QLLAPVGSLSRYHTIEWLNYIATELHKGFTPL-----FR----PD 116 (201)
T ss_pred CCCCCeEEeCCCcEeecHHHHHHHHHHhCccc---ccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhc-----cC----CC
Confidence 48999998 58899999999999999999863 344 5677889999999988766655432221 11 12
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHH
Q 030858 80 QDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKK 159 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~ 159 (170)
..+...+.....+.+.++.+|++|++++|++|+++|+||+++++++.++..... ....+|+|.+|+++|.++|++|+
T Consensus 117 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~---~~~~~p~l~~w~~~~~~~p~~k~ 193 (201)
T PRK10542 117 TPEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAVKL---NLEGLEHIAAYMQRVAERPAVAA 193 (201)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhccCC---CcccchHHHHHHHHHHcCHHHHH
Confidence 223334566778899999999999989999999999999999999888754332 25689999999999999999999
Q ss_pred HHHHHh
Q 030858 160 VVDMQK 165 (170)
Q Consensus 160 ~~~~~~ 165 (170)
++..+.
T Consensus 194 ~~~~~~ 199 (201)
T PRK10542 194 ALKAEG 199 (201)
T ss_pred HHHHcc
Confidence 998753
No 5
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.95 E-value=4.5e-27 Score=163.38 Aligned_cols=156 Identities=20% Similarity=0.254 Sum_probs=119.8
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQD 81 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (170)
.|+||+|+++|.+|+||.+|++||++++++. .+.|.+..+++++++|+.+....+.+........... +..+ ...
T Consensus 49 ~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~---~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~ 123 (210)
T TIGR01262 49 QGLVPTLDIDGEVLTQSLAIIEYLEETYPDP---PLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLR-EKLG-VEE 123 (210)
T ss_pred CCcCCEEEECCEEeecHHHHHHHHHHhCCCC---CCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHH-hhcC-CCH
Confidence 4899999999999999999999999999873 4899999999999999998876665432211111111 1001 122
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCC--CCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHH
Q 030858 82 EGVIKQNEEKLAKVLDVYEKRLGE--SRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKK 159 (170)
Q Consensus 82 ~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~ 159 (170)
....+...+.+.+.++.+|++|++ ++|++|+++|+||+++++.+.++.... ..++.+|+|.+|+++|.+||++|+
T Consensus 124 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~~---~~~~~~p~l~~~~~~~~~rp~~~~ 200 (210)
T TIGR01262 124 EARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERFG---VDLTPYPTLRRIAAALAALPAFQR 200 (210)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHcC---CCcccchHHHHHHHHHhcCHHHHH
Confidence 223344556789999999999986 469999999999999999998875332 235789999999999999999999
Q ss_pred HHHHHh
Q 030858 160 VVDMQK 165 (170)
Q Consensus 160 ~~~~~~ 165 (170)
++....
T Consensus 201 ~~~~~~ 206 (210)
T TIGR01262 201 AHPENQ 206 (210)
T ss_pred hCcccC
Confidence 988764
No 6
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.95 E-value=2.2e-27 Score=165.52 Aligned_cols=154 Identities=19% Similarity=0.194 Sum_probs=118.5
Q ss_pred Cccceeeee-----CC--eEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhcc
Q 030858 2 IHLYLVLGF-----NH--VILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAP 74 (170)
Q Consensus 2 ~~~vP~L~~-----~~--~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (170)
.|+||+|++ +| .+|+||.||++||+++++. +.|.++.+++++++|+.|....+.+.+.... .+..
T Consensus 49 ~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~~~-----l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~---~~~~ 120 (215)
T PRK13972 49 NNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGL-----FLSHETRERAATLQWLFWQVGGLGPMLGQNH---HFNH 120 (215)
T ss_pred CCCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHHHHhhccCcceeeee---eeec
Confidence 489999986 45 5899999999999999863 6788889999999999998777765432210 0000
Q ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcC
Q 030858 75 RMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNR 154 (170)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~ 154 (170)
. .....+...+.....+.+.+..+|++|++++|++|+++|+|||++++.+....... ...+.+|+|.+|+++|.+|
T Consensus 121 ~-~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~---~~~~~~P~l~~w~~r~~~r 196 (215)
T PRK13972 121 A-APQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQR---IDLAMYPAVKNWHERIRSR 196 (215)
T ss_pred c-CCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhcC---CcchhCHHHHHHHHHHHhC
Confidence 0 11223345566777889999999999998999999999999999988775443222 2357899999999999999
Q ss_pred ccHHHHHHHHhhc
Q 030858 155 DSWKKVVDMQKQQ 167 (170)
Q Consensus 155 p~~~~~~~~~~~~ 167 (170)
|++++++.+..-+
T Consensus 197 p~~~~~~~~~~~~ 209 (215)
T PRK13972 197 PATGQALLKAQLG 209 (215)
T ss_pred HHHHHHHHHhccc
Confidence 9999998877644
No 7
>PRK15113 glutathione S-transferase; Provisional
Probab=99.95 E-value=9.8e-27 Score=162.08 Aligned_cols=156 Identities=17% Similarity=0.164 Sum_probs=116.9
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQD 81 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (170)
.|+||+|+++|.+|+||.||++||++++++.+..+++|.++.+++++++|+.+....+.+..........+. ....
T Consensus 56 ~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 131 (214)
T PRK15113 56 TRRVPTLQHDDFELSESSAIAEYLEERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFA----GAKK 131 (214)
T ss_pred CCCCCEEEECCEEEecHHHHHHHHHHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhcc----CCCC
Confidence 589999999999999999999999999986321238899999999999999988765543221100001111 1111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCC-CCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHH
Q 030858 82 EGVIKQNEEKLAKVLDVYEKRLGE-SRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKV 160 (170)
Q Consensus 82 ~~~~~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 160 (170)
....+.....+.+.++.+|++|++ +.|++|+ +|+||+++++.+.++..... .+ .|+|.+|++||.+||+|+++
T Consensus 132 ~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~~~---~~--~p~l~~~~~r~~~rp~~~~~ 205 (214)
T PRK15113 132 APLSEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLHGD---EV--PERLADYATFQWQRASVQRW 205 (214)
T ss_pred CcccHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHcCC---CC--CHHHHHHHHHHhcCHHHHHH
Confidence 223455666788999999999975 4799996 99999999999987754322 12 29999999999999999999
Q ss_pred HHHHhhc
Q 030858 161 VDMQKQQ 167 (170)
Q Consensus 161 ~~~~~~~ 167 (170)
++..+..
T Consensus 206 ~~~~~~~ 212 (214)
T PRK15113 206 LALSAKR 212 (214)
T ss_pred HHHhhhh
Confidence 9987654
No 8
>PRK11752 putative S-transferase; Provisional
Probab=99.94 E-value=1.1e-25 Score=161.08 Aligned_cols=155 Identities=24% Similarity=0.238 Sum_probs=116.2
Q ss_pred CccceeeeeC----CeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccC
Q 030858 2 IHLYLVLGFN----HVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMN 77 (170)
Q Consensus 2 ~~~vP~L~~~----~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (170)
.|+||+|+++ +.+|+||.||++||+++++. |+|.++.+++++++|+.+....+ ..+...+...+.. .
T Consensus 98 ~GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~~~-----L~P~~~~era~v~~wl~~~~~~~-~~~~~~~~~~~~~---~ 168 (264)
T PRK11752 98 NSKIPALLDRSGNPPIRVFESGAILLYLAEKFGA-----FLPKDLAARTETLNWLFWQQGSA-PFLGGGFGHFYAY---A 168 (264)
T ss_pred CCCCCEEEeCCCCCCeEEEcHHHHHHHHHHhcCC-----cCCCCHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHh---C
Confidence 4899999874 37999999999999999974 88999999999999999876543 2121111111111 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhc----CcCcccCCCchHHHHHHHHhc
Q 030858 78 IKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNAT----DRGEILTSRDNVGRWWGEISN 153 (170)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~----~~~~~~~~~p~l~~w~~~~~~ 153 (170)
....+...+.....+.+.|+.+|++|++++|++|+++|+|||++++.+.++.... ......+.+|+|.+|+++|.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~ 248 (264)
T PRK11752 169 PEKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAE 248 (264)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHh
Confidence 1222334566677789999999999998899999999999999999887764311 011125779999999999999
Q ss_pred CccHHHHHHHHh
Q 030858 154 RDSWKKVVDMQK 165 (170)
Q Consensus 154 ~p~~~~~~~~~~ 165 (170)
||++++++..+.
T Consensus 249 rPs~k~~~~~~~ 260 (264)
T PRK11752 249 RPAVKRGRIVNR 260 (264)
T ss_pred CHHHHHHHhccc
Confidence 999999887654
No 9
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.94 E-value=7e-26 Score=156.52 Aligned_cols=152 Identities=18% Similarity=0.166 Sum_probs=116.2
Q ss_pred Cccceeee-eCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCC
Q 030858 2 IHLYLVLG-FNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQ 80 (170)
Q Consensus 2 ~~~vP~L~-~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (170)
.|+||+|+ ++|.+|+||.+|++||++++++. .++|.++.+++.+++|..+....+..... ...... .+ +...
T Consensus 46 ~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~---~l~p~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~-~~--~~~~ 118 (202)
T PRK10357 46 LGKVPALVTEEGECWFDSPIIAEYIELLNVAP---AMLPRDPLAALRVRQLEALADGIMDAALV-SVREQA-RP--AAQQ 118 (202)
T ss_pred ccCCCeEEeCCCCeeecHHHHHHHHHHhCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHh-Cc--cccc
Confidence 48999997 67899999999999999998763 48999988999999998776655433222 121111 11 1223
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHH
Q 030858 81 DEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKV 160 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 160 (170)
.....+.....+.+.++.+|++|++++ ++|+++|+||+++++++.++............+|++.+|+++|.+||+|+++
T Consensus 119 ~~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp~~~~~ 197 (202)
T PRK10357 119 SEDELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFART 197 (202)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcChhhhhc
Confidence 334556677889999999999998878 9999999999999999987754222222346799999999999999999986
Q ss_pred H
Q 030858 161 V 161 (170)
Q Consensus 161 ~ 161 (170)
.
T Consensus 198 ~ 198 (202)
T PRK10357 198 E 198 (202)
T ss_pred C
Confidence 4
No 10
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=2.9e-25 Score=154.39 Aligned_cols=147 Identities=24% Similarity=0.402 Sum_probs=121.0
Q ss_pred CccceeeeeCCe-EEechhHHHHHHHHhCCCCCCCCCCCCCHH---HHHHHHHHHHHHhcccCchhHHHHHHHHhccccC
Q 030858 2 IHLYLVLGFNHV-ILSESRAICRYVCENYPEKGNKGLFGTNPL---AKASIDQWLEAEGQSFNPPSSALVFQLALAPRMN 77 (170)
Q Consensus 2 ~~~vP~L~~~~~-~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (170)
.|+||+|++++. +|+||.||++||+++|++.+ ++|.++. +++.+..|+.+....+.+.+....... ...
T Consensus 48 ~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~~---l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 120 (211)
T COG0625 48 LGKVPALVDDDGEVLTESGAILEYLAERYPGPP---LLPADPLARRARALLLWWLFFAASDLHPVIGQRRRAL-LGS--- 120 (211)
T ss_pred CCCCCEEeeCCCCeeecHHHHHHHHHhhCCCCC---cCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhh-ccc---
Confidence 489999998765 99999999999999999732 8998875 788888999998888887766655444 222
Q ss_pred CCC-ChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCcc
Q 030858 78 IKQ-DEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDS 156 (170)
Q Consensus 78 ~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~ 156 (170)
... .....+.....+...+..+++.|++++|++|+++|+||+.+++.+.++...... .+.+|++.+|++||.++|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~~~~---~~~~p~l~~w~~r~~~rp~ 197 (211)
T COG0625 121 EPELLEAALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALLGEE---LADYPALKAWYERVLARPA 197 (211)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhcCcc---cccChHHHHHHHHHHcCCc
Confidence 122 566788889999999999999999999999999999999999999886543322 3789999999999999999
Q ss_pred HH
Q 030858 157 WK 158 (170)
Q Consensus 157 ~~ 158 (170)
++
T Consensus 198 ~~ 199 (211)
T COG0625 198 FR 199 (211)
T ss_pred hh
Confidence 66
No 11
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=2e-25 Score=156.14 Aligned_cols=160 Identities=28% Similarity=0.382 Sum_probs=132.2
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhcc-ccCCCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAP-RMNIKQ 80 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 80 (170)
+|+||+|+++|..++||.||+.||.++|+ .....++|.+...++.+++|+.+..+.+.+... ...++.+ ..+...
T Consensus 51 ~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~-~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~---~~~~~~p~~~~~~~ 126 (226)
T KOG0867|consen 51 LGKVPALEDGGLTLWESHAILRYLAEKYG-PLGGILLPKDLKERAIVDQWLEFENGVLDPVTF---ERPILAPLLVGLPL 126 (226)
T ss_pred CCCCCeEecCCeEEeeHHHHHHHHHHHcC-CCCcccCCcCHHHHHHHHHHHHhhhcccccccc---cceeeecceecccC
Confidence 58999999999999999999999999998 432339999999999999999998888887543 2233334 334445
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHH
Q 030858 81 DEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKV 160 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 160 (170)
+....++....+...++.+|++|.++.|+.|+++|+||+.+.+.+..+...........++|++.+|++++.++|++++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P~~~e~ 206 (226)
T KOG0867|consen 127 NPTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRPAYEEA 206 (226)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCccHHHH
Confidence 66778899999999999999999999999999999999999999988842111235678899999999999999999997
Q ss_pred HHHHh
Q 030858 161 VDMQK 165 (170)
Q Consensus 161 ~~~~~ 165 (170)
.....
T Consensus 207 ~~~~~ 211 (226)
T KOG0867|consen 207 NEKGA 211 (226)
T ss_pred HHHHH
Confidence 76543
No 12
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.93 E-value=1.7e-24 Score=149.91 Aligned_cols=145 Identities=19% Similarity=0.212 Sum_probs=103.4
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQD 81 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (170)
+|+||+|++||.+|+||.||++||+++++. .+.+..++..+........+ +...+... ..+ .
T Consensus 56 ~g~vP~L~~~~~~l~eS~AI~~YLa~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~--------~ 117 (205)
T PTZ00057 56 FEQVPILEMDNIIFAQSQAIVRYLSKKYKI------CGESELNEFYADMIFCGVQD-IHYKFNNT---NLF--------K 117 (205)
T ss_pred CCCCCEEEECCEEEecHHHHHHHHHHHcCC------CCCCHHHHHHHHHHHHHHHH-HHHHHhhh---HHH--------H
Confidence 589999999999999999999999999974 34444444344333222111 11001000 000 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCC--CccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHH
Q 030858 82 EGVIKQNEEKLAKVLDVYEKRLGES--RFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKK 159 (170)
Q Consensus 82 ~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~ 159 (170)
+...+.....+.+.+..+|+.|+++ +|++|+++|+||+++++.+.++... . ...++.+|+|.+|++||.++|++++
T Consensus 118 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~-~-~~~l~~~P~l~~~~~r~~~~P~~k~ 195 (205)
T PTZ00057 118 QNETTFLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETK-Y-PNSLKNFPLLKAHNEFISNLPNIKN 195 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHh-C-hhhhccChhHHHHHHHHHhChHHHH
Confidence 1122445677899999999999754 7999999999999999988776531 1 2346899999999999999999999
Q ss_pred HHHHHhh
Q 030858 160 VVDMQKQ 166 (170)
Q Consensus 160 ~~~~~~~ 166 (170)
+++++..
T Consensus 196 y~~~~~~ 202 (205)
T PTZ00057 196 YISNRKE 202 (205)
T ss_pred HHHhCCC
Confidence 9988753
No 13
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=3.8e-24 Score=146.59 Aligned_cols=152 Identities=19% Similarity=0.287 Sum_probs=120.3
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQD 81 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (170)
.++||+|+++|..|+||..|++||++.+++. .+++|+++.+|+..+.|..+.+.-+........ ....
T Consensus 56 hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~--~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~----------~~~~ 123 (231)
T KOG0406|consen 56 HKKVPVLEHNGKPICESLIIVEYIDETWPSG--PPILPSDPYERAQARFWAEYIDKKVFFVGRFVV----------AAKG 123 (231)
T ss_pred cccCCEEEECCceehhhHHHHHHHHhhccCC--CCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHH----------hhcC
Confidence 5799999999999999999999999999963 469999999999999999988765533222211 1222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhC-CCCccccCCcchhhhchhhhHHHHHhhcC-----cCcccCCCchHHHHHHHHhcCc
Q 030858 82 EGVIKQNEEKLAKVLDVYEKRLG-ESRFLAGDEFSLADLSHLPNAHYLVNATD-----RGEILTSRDNVGRWWGEISNRD 155 (170)
Q Consensus 82 ~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aDi~~~~~l~~~~~~~~-----~~~~~~~~p~l~~w~~~~~~~p 155 (170)
....+...+.+...|..+|+.|. +++|++|+++++.|+++++.+.+...... .....+++|+|.+|.+||.+++
T Consensus 124 ~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~ 203 (231)
T KOG0406|consen 124 GEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDE 203 (231)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcCh
Confidence 23456677788899999999998 78999999999999999977655543321 1234678999999999999999
Q ss_pred cHHHHHHHHh
Q 030858 156 SWKKVVDMQK 165 (170)
Q Consensus 156 ~~~~~~~~~~ 165 (170)
++++++....
T Consensus 204 ~V~~~~p~~e 213 (231)
T KOG0406|consen 204 AVKAVLPDSE 213 (231)
T ss_pred hHHhhcCCHH
Confidence 9999865443
No 14
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=2.2e-23 Score=135.32 Aligned_cols=156 Identities=21% Similarity=0.224 Sum_probs=125.1
Q ss_pred ccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCCh
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDE 82 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (170)
++||+|++||.+|+||.||++||+++||+ ++|+|.++..|+..++......+.+.+.-........ +.....
T Consensus 56 ~kVP~L~i~g~tl~eS~AII~YLeEt~P~---ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l-----~ek~~~ 127 (217)
T KOG0868|consen 56 EKVPTLVIDGLTLTESLAIIEYLEETYPD---PPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKML-----NEKEPG 127 (217)
T ss_pred hhCCeEEECCEEeehHHHHHHHHHhcCCC---CCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHh-----cccccc
Confidence 68999999999999999999999999998 5699999999999999999888888775444333222 222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHH
Q 030858 83 GVIKQNEEKLAKVLDVYEKRLGE--SRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKV 160 (170)
Q Consensus 83 ~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 160 (170)
....-+...+.+.+..||+.|.. +.|-+||++|+||+++.+.+....... ..+..||.+.+-.+.+...|+|+..
T Consensus 128 ~~~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~rf~---vdl~PYPti~ri~e~l~elpaFq~a 204 (217)
T KOG0868|consen 128 YGDQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRFH---VDLTPYPTITRINEELAELPAFQAA 204 (217)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhhcc---ccCCcCchHHHHHHHHHhCHHHHhc
Confidence 22445566788999999999964 689999999999999999987774332 4578999999999999999999998
Q ss_pred HHHHhhcCC
Q 030858 161 VDMQKQQHS 169 (170)
Q Consensus 161 ~~~~~~~~~ 169 (170)
+.....-.|
T Consensus 205 hP~nQPD~P 213 (217)
T KOG0868|consen 205 HPDNQPDTP 213 (217)
T ss_pred CCCCCCCCC
Confidence 776554443
No 15
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=3.4e-23 Score=140.91 Aligned_cols=153 Identities=22% Similarity=0.201 Sum_probs=119.7
Q ss_pred CCccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCC
Q 030858 1 MIHLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQ 80 (170)
Q Consensus 1 ~~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (170)
.+|.||+|..||..|.+|.||++||+++++ +.|.++.+.+.++.+.+...+.... ++...+..+ ....
T Consensus 48 pfgqlP~l~vDg~~i~QS~AI~RyLArk~g------l~Gkt~~E~a~vD~i~d~~~D~~~~----~~~~~~~~~--~~g~ 115 (206)
T KOG1695|consen 48 PFGQLPVLEVDGKKLVQSRAILRYLARKFG------LAGKTEEEEAWVDMIVDQFKDFRWE----IFRQPYTAP--EAGK 115 (206)
T ss_pred CCCCCCEEeECCEeeccHHHHHHHHHHHhC------cCCCCHHHHHHHHHHHHhhhhHHHH----HHHHhhhhh--hhcc
Confidence 378999999999999999999999999999 8999999999999988866554322 122122212 1122
Q ss_pred ChHHHH-HHHHHHHHHHHHHHHHhC--CCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccH
Q 030858 81 DEGVIK-QNEEKLAKVLDVYEKRLG--ESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSW 157 (170)
Q Consensus 81 ~~~~~~-~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 157 (170)
.+...+ .........++.+++.|. .++|++|+++|+||+.++..+..+... ........+|+|.++.+++.++|.+
T Consensus 116 ~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~-~~~~~~~~~P~L~a~~~kv~~~p~i 194 (206)
T KOG1695|consen 116 SEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEEL-LDPSALDHFPKLKAFKERVSSIPNI 194 (206)
T ss_pred chhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHh-cCchhhccChHHHHHHHHHhcCchH
Confidence 222222 667778889999999997 358999999999999999999888763 2235577899999999999999999
Q ss_pred HHHHHHHhh
Q 030858 158 KKVVDMQKQ 166 (170)
Q Consensus 158 ~~~~~~~~~ 166 (170)
+++++.+..
T Consensus 195 k~~i~~r~~ 203 (206)
T KOG1695|consen 195 KKYLESRPV 203 (206)
T ss_pred HHHHhcCCC
Confidence 999987653
No 16
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.90 E-value=8.5e-23 Score=142.86 Aligned_cols=146 Identities=20% Similarity=0.214 Sum_probs=103.7
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQD 81 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (170)
.|+||+|+++|.+|+||.+|++||++.|+....+++.|.++..++....+... +..+ .. ...
T Consensus 56 ~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~~~~~~~~~~~l~~~--------~~~~-----~~-----~~~ 117 (236)
T TIGR00862 56 GTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPKHPESNTAGLDIFAK--------FSAY-----IK-----NSN 117 (236)
T ss_pred CCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHHH--------HHHH-----HH-----cCC
Confidence 47999999999999999999999999997531123566665544422111110 1111 10 111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhC------------------CCCccccCCcchhhhchhhhHHHHHhh---cCcCcccCC
Q 030858 82 EGVIKQNEEKLAKVLDVYEKRLG------------------ESRFLAGDEFSLADLSHLPNAHYLVNA---TDRGEILTS 140 (170)
Q Consensus 82 ~~~~~~~~~~~~~~l~~le~~L~------------------~~~~l~G~~~t~aDi~~~~~l~~~~~~---~~~~~~~~~ 140 (170)
+...+...+.+.+.++.||++|. +++|+.|+++|+|||++++.+.++..+ ..+....+.
T Consensus 118 ~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~ 197 (236)
T TIGR00862 118 PEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAE 197 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCcccc
Confidence 22334455668888999999886 479999999999999999999888643 123234688
Q ss_pred CchHHHHHHHHhcCccHHHHHHHHh
Q 030858 141 RDNVGRWWGEISNRDSWKKVVDMQK 165 (170)
Q Consensus 141 ~p~l~~w~~~~~~~p~~~~~~~~~~ 165 (170)
+|+|.+|++++.++|+|++++....
T Consensus 198 ~p~l~~w~~~~~~~~sf~~t~p~~~ 222 (236)
T TIGR00862 198 FTGVWRYLSNAYAREEFTNTCPDDK 222 (236)
T ss_pred CchHHHHHHHHhccchHHhhCCChH
Confidence 9999999999999999999865543
No 17
>PLN02378 glutathione S-transferase DHAR1
Probab=99.89 E-value=1.8e-22 Score=140.43 Aligned_cols=140 Identities=24% Similarity=0.277 Sum_probs=100.0
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQD 81 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (170)
.|+||+|+++|.+|+||.+|++||++++++.. + .++.+++.+...+.. .+..+ ... ...
T Consensus 57 ~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~---l--~~~~~~a~i~~~~~~-------~~~~~-----~~~----~~~ 115 (213)
T PLN02378 57 QGKVPVLKIDDKWVTDSDVIVGILEEKYPDPP---L--KTPAEFASVGSNIFG-------TFGTF-----LKS----KDS 115 (213)
T ss_pred CCCCCEEEECCEEecCHHHHHHHHHHhCCCCC---C--CCHHHHHHHHHHHHH-------HHHHH-----Hhc----CCh
Confidence 48999999999999999999999999998632 3 345566655543211 11111 111 111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhC--CCCccccCCcchhhhchhhhHHHHHhh-c--CcCcccCCCchHHHHHHHHhcCcc
Q 030858 82 EGVIKQNEEKLAKVLDVYEKRLG--ESRFLAGDEFSLADLSHLPNAHYLVNA-T--DRGEILTSRDNVGRWWGEISNRDS 156 (170)
Q Consensus 82 ~~~~~~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aDi~~~~~l~~~~~~-~--~~~~~~~~~p~l~~w~~~~~~~p~ 156 (170)
.+.....+.+.++.+|++|+ +++|++|+++|+||+++++.+.++... . ......+.+|+|.+|+++|.+||+
T Consensus 116 ---~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa 192 (213)
T PLN02378 116 ---NDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDS 192 (213)
T ss_pred ---hhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCC
Confidence 12233566778999999997 469999999999999999998776422 1 111234679999999999999999
Q ss_pred HHHHHHHHh
Q 030858 157 WKKVVDMQK 165 (170)
Q Consensus 157 ~~~~~~~~~ 165 (170)
+++++..++
T Consensus 193 ~~~~~~~~~ 201 (213)
T PLN02378 193 FEKTKTEEK 201 (213)
T ss_pred eecccCChH
Confidence 998876654
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.88 E-value=3e-22 Score=139.15 Aligned_cols=143 Identities=15% Similarity=0.123 Sum_probs=99.1
Q ss_pred ccceee-eeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccc------
Q 030858 3 HLYLVL-GFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPR------ 75 (170)
Q Consensus 3 ~~vP~L-~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 75 (170)
|+||+| .++|.+|+||.+|++||+++|++. .+.+ ..++.+++|+.+....+...+...+... ..+.
T Consensus 46 ~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~---~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 118 (210)
T PRK10387 46 KQVPILQKDDGSYMPESLDIVHYIDELDGKP---LLTG---KRSPAIEEWLRKVFGYLNKLLYPRFAKA-DLPEFATPSA 118 (210)
T ss_pred cccceEEecCCeEecCHHHHHHHHHHhCCCc---cCCC---cccHHHHHHHHHHHHHhhcchhcccccC-CCcccCCHHH
Confidence 789999 588999999999999999999863 2331 2567788888766544433221111000 0000
Q ss_pred ---------cCCCCCh---HHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCch
Q 030858 76 ---------MNIKQDE---GVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDN 143 (170)
Q Consensus 76 ---------~~~~~~~---~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~ 143 (170)
......+ ...+.....+.+.|+.++++|++ +|++|+++|+||+++++++.++..... ...+|+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~~----~~~~p~ 193 (210)
T PRK10387 119 RQYFIDKKEASIGDFDALLAHTPGLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVKG----IEWPPR 193 (210)
T ss_pred HHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeecC----CCCCHH
Confidence 0000000 01135567889999999999987 999999999999999999988864321 234699
Q ss_pred HHHHHHHHhcCccH
Q 030858 144 VGRWWGEISNRDSW 157 (170)
Q Consensus 144 l~~w~~~~~~~p~~ 157 (170)
|.+|++||.+||.+
T Consensus 194 l~~w~~r~~~r~~~ 207 (210)
T PRK10387 194 VADYRDNMSKKTQV 207 (210)
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999875
No 19
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.87 E-value=1.3e-21 Score=139.65 Aligned_cols=139 Identities=22% Similarity=0.239 Sum_probs=100.6
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQD 81 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (170)
.|+||+|+++|.+|+||.+|++||++++++. .+. ++.+++.+..++... +.. ++.. ....
T Consensus 110 ~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~---~L~--~~~era~i~~~l~~~-------~~~-----~~~~---~~~~ 169 (265)
T PLN02817 110 EGKVPVVKLDEKWVADSDVITQALEEKYPDP---PLA--TPPEKASVGSKIFST-------FIG-----FLKS---KDPG 169 (265)
T ss_pred CCCCCEEEECCEEEecHHHHHHHHHHHCCCC---CCC--CHHHHHHHHHHHHHH-------HHH-----Hhcc---CCcc
Confidence 4899999999999999999999999999973 243 466777776644211 111 1111 1111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCC-CCccccCCcchhhhchhhhHHHHHhh-c--CcCcccCCCchHHHHHHHHhcCccH
Q 030858 82 EGVIKQNEEKLAKVLDVYEKRLGE-SRFLAGDEFSLADLSHLPNAHYLVNA-T--DRGEILTSRDNVGRWWGEISNRDSW 157 (170)
Q Consensus 82 ~~~~~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~aDi~~~~~l~~~~~~-~--~~~~~~~~~p~l~~w~~~~~~~p~~ 157 (170)
+.....+.+.++.+|+.|++ ++|++|+++|+||+++++.+.++... . .+....+.+|+|.+|+++|.++|+|
T Consensus 170 ----~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~ 245 (265)
T PLN02817 170 ----DGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESF 245 (265)
T ss_pred ----hHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhH
Confidence 12234567789999999974 69999999999999999998776432 1 1112347899999999999999999
Q ss_pred HHHHHHH
Q 030858 158 KKVVDMQ 164 (170)
Q Consensus 158 ~~~~~~~ 164 (170)
+++....
T Consensus 246 ~~~~~~~ 252 (265)
T PLN02817 246 VKTRALP 252 (265)
T ss_pred hhcCCCH
Confidence 9986643
No 20
>PLN02907 glutamate-tRNA ligase
Probab=99.86 E-value=7.2e-21 Score=150.87 Aligned_cols=135 Identities=16% Similarity=0.232 Sum_probs=105.5
Q ss_pred Cccceeee-eCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCC
Q 030858 2 IHLYLVLG-FNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQ 80 (170)
Q Consensus 2 ~~~vP~L~-~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (170)
.|+||+|+ ++|.+|+||.||++||++.++.. .|+|.++.+++++++|+.+......
T Consensus 35 ~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~---~L~p~d~~erAqV~qWL~~~~~~~~-------------------- 91 (722)
T PLN02907 35 SGSAPTLLFSSGEKLTGTNVLLRYIARSASLP---GFYGQDAFESSQVDEWLDYAPTFSS-------------------- 91 (722)
T ss_pred CCCCcEEEECCCCEEECHHHHHHHHHHhCCCc---CCCCCCHHHHHHHHHHHHHHhhccc--------------------
Confidence 47999998 58899999999999999999863 4899999999999999987643110
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCcc----
Q 030858 81 DEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDS---- 156 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~---- 156 (170)
...+...++.+|++|++++|++|+++|+||+++++.+...............+|+|.+|+++|.++|+
T Consensus 92 --------~~~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs~~~~ 163 (722)
T PLN02907 92 --------GSEFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYSDILN 163 (722)
T ss_pred --------HHHHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCCcchh
Confidence 01345678999999999999999999999999998885541111111235789999999999999999
Q ss_pred --HHHHHHHHhhc
Q 030858 157 --WKKVVDMQKQQ 167 (170)
Q Consensus 157 --~~~~~~~~~~~ 167 (170)
++++.++++..
T Consensus 164 ~~~~a~~~~~~~~ 176 (722)
T PLN02907 164 EVTAAYVGKRGAG 176 (722)
T ss_pred hHHHHHHHhhccc
Confidence 66666554433
No 21
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.81 E-value=7.1e-20 Score=127.08 Aligned_cols=144 Identities=16% Similarity=0.124 Sum_probs=93.6
Q ss_pred Cccceeee-eCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHH------------
Q 030858 2 IHLYLVLG-FNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVF------------ 68 (170)
Q Consensus 2 ~~~vP~L~-~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 68 (170)
.|+||+|+ ++|.+++||.+|++||+++|+.. .+.|. .+..++.|+.+....+...+...+.
T Consensus 44 ~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (209)
T TIGR02182 44 AKQVPILQKDDGRAMPESLDIVAYFDKLDGEP---LLTGK---VSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQSA 117 (209)
T ss_pred CCCcceEEeeCCeEeccHHHHHHHHHHhCCCc---cCCCC---ChHHHHHHHHHHHHHhhhhhccccccCCCcccCCHHH
Confidence 38999998 88999999999999999999862 23332 3456666666544333211111000
Q ss_pred -HHHhccc-cCCCCCh---HHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCc-
Q 030858 69 -QLALAPR-MNIKQDE---GVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRD- 142 (170)
Q Consensus 69 -~~~~~~~-~~~~~~~---~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p- 142 (170)
..+..+. .+.+... ...++....+++.|+.++++|++++|++| ++|+||+++++.+.++..... ..+|
T Consensus 118 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~~-----~~~p~ 191 (209)
T TIGR02182 118 RKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVAG-----INWPS 191 (209)
T ss_pred HHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeecC-----CCCCh
Confidence 0000000 0000000 00135567788999999999999999965 699999999999977753221 1256
Q ss_pred hHHHHHHHHhcCccH
Q 030858 143 NVGRWWGEISNRDSW 157 (170)
Q Consensus 143 ~l~~w~~~~~~~p~~ 157 (170)
+|.+|++||.+|+++
T Consensus 192 ~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 192 RVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999999865
No 22
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.79 E-value=2.7e-18 Score=108.77 Aligned_cols=117 Identities=51% Similarity=0.959 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhh
Q 030858 44 AKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLP 123 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~ 123 (170)
+++++.+|+.+..+.+.+.+........+.+..+........+.....+.+.++.+|++|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 81 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLP 81 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHH
Confidence 57889999999888888776665444444443333455566677888999999999999999999999999999999999
Q ss_pred hHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHH
Q 030858 124 NAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVV 161 (170)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 161 (170)
++.++..... ....+.+|+|.+|+++|.++|++++++
T Consensus 82 ~~~~~~~~~~-~~~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 82 YLQYLMATPF-AKLFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHccc-hhhhhcCchHHHHHHHHHhCHHHHhhC
Confidence 9888753222 123568999999999999999998763
No 23
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.77 E-value=5.4e-18 Score=106.66 Aligned_cols=112 Identities=25% Similarity=0.348 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhh
Q 030858 44 AKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLP 123 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~ 123 (170)
+++++++|+.|....+.+.+........+.+ ...+...+.....+.+.++.+|+.|++++|++|+++|+|||++++
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 76 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAP----EKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFP 76 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCC----CCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHH
Confidence 3688999999999999887765544333322 233445677888899999999999998999999999999999999
Q ss_pred hHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHH
Q 030858 124 NAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVV 161 (170)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 161 (170)
.+.+...... .....+|++.+|+++|.++|++++++
T Consensus 77 ~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 77 WVRRLEWIGI--DDLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHHHHhccc--cchhhchHHHHHHHHHhhCHHHHHhc
Confidence 9988865432 23577999999999999999999875
No 24
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.76 E-value=4.7e-18 Score=107.18 Aligned_cols=113 Identities=16% Similarity=0.213 Sum_probs=87.9
Q ss_pred CCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhh
Q 030858 40 TNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADL 119 (170)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi 119 (170)
.++..++.+++|.++....+.+.+....+... .+. ...+.....+.+.++.+|++|++++|++|+++|+||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi 73 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADR----YPE----ESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADW 73 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhh----cCc----ccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHH
Confidence 35788999999999998888765555433221 111 1366778889999999999999999999999999999
Q ss_pred chhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHH
Q 030858 120 SHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKV 160 (170)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 160 (170)
++++.+.++..........+.+|+|.+|+++|.++|+++++
T Consensus 74 ~l~~~l~~~~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 74 AIFPFVRQFAHVDPKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHHHHHHHHHhhhcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 99988876643322122358899999999999999999985
No 25
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.75 E-value=4.4e-18 Score=107.16 Aligned_cols=113 Identities=19% Similarity=0.297 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhh
Q 030858 44 AKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLP 123 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~ 123 (170)
+++.+++|+.|..+.+.+.+....+.....+ +....+...+.....+.+.++.+|+.|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~ 79 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWAT--DEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFV 79 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhccccccccc--ChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHH
Confidence 4788999999998888876644332211111 11222445667788899999999999998899999999999999999
Q ss_pred hHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHH
Q 030858 124 NAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVV 161 (170)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 161 (170)
.+.++.... ...+.+|++.+|+++|.++|++++++
T Consensus 80 ~~~~~~~~~---~~~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 80 VLRWAPGVG---LDLSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHhhcC---CChhhChHHHHHHHHHHhCHHhHhhC
Confidence 998775422 22467999999999999999999863
No 26
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.75 E-value=1.6e-17 Score=114.25 Aligned_cols=160 Identities=24% Similarity=0.261 Sum_probs=107.3
Q ss_pred ccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCC-HHHHHHH---HHHHH------HHhcc-cCc---------h
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTN-PLAKASI---DQWLE------AEGQS-FNP---------P 62 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~-~~~~~~~---~~~~~------~~~~~-~~~---------~ 62 (170)
+.|||+.+++.+|.|+.-|++|+++++-++. .|.|+- ..+..++ ++.++ |...+ +++ .
T Consensus 76 gevPVl~~g~~II~d~tqIIdYvErtf~ger--~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~ 153 (325)
T KOG4420|consen 76 GEVPVLIHGDNIISDYTQIIDYVERTFTGER--VLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPK 153 (325)
T ss_pred CCCceEecCCeecccHHHHHHHHHHhhcccc--cccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcc
Confidence 6799999999999999999999999988763 577742 2222222 22221 11111 111 1
Q ss_pred hH---HHHHHH---Hhc-ccc--------------------CCCCChHHHHHHHHHHHHHHHHHHHHhCC----CCcccc
Q 030858 63 SS---ALVFQL---ALA-PRM--------------------NIKQDEGVIKQNEEKLAKVLDVYEKRLGE----SRFLAG 111 (170)
Q Consensus 63 ~~---~~~~~~---~~~-~~~--------------------~~~~~~~~~~~~~~~~~~~l~~le~~L~~----~~~l~G 111 (170)
.. ...-.. ... ... ....+.....+....+.+.|+.+|+.|.. ..|++|
T Consensus 154 ~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G 233 (325)
T KOG4420|consen 154 YAEIRRHLAKATTDVMKLDHEEEPDLAEAYLAKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCG 233 (325)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeecc
Confidence 11 000000 000 000 01123345566677788888999998876 489999
Q ss_pred CCcchhhhchhhhHHHHHhhcCcCccc--CCCchHHHHHHHHhcCccHHHHHHHH
Q 030858 112 DEFSLADLSHLPNAHYLVNATDRGEIL--TSRDNVGRWWGEISNRDSWKKVVDMQ 164 (170)
Q Consensus 112 ~~~t~aDi~~~~~l~~~~~~~~~~~~~--~~~p~l~~w~~~~~~~p~~~~~~~~~ 164 (170)
+++|+||+++.+.|.++...+...... .+.|+|.+|+.|+..|++|++++..-
T Consensus 234 ~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrpnle~Yf~rvrrR~sf~kvlg~~ 288 (325)
T KOG4420|consen 234 CEFSLADVSLGATLHRLKFLGLEKKYWEDGSRPNLESYFERVRRRFSFRKVLGDI 288 (325)
T ss_pred ccchHHHHHHHHHHHHHHHcccHHHhcccCCCccHHHHHHHHHhhhHHHHhhhhH
Confidence 999999999999999998776654433 37999999999999999999997653
No 27
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.73 E-value=4.9e-17 Score=106.26 Aligned_cols=114 Identities=14% Similarity=0.142 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchh
Q 030858 43 LAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHL 122 (170)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~ 122 (170)
+.++++++|++|..+.+.+.+.... ...++...+.....+.+.++.+|+.|++++|++|+++|+|||+++
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~ 72 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAG----------FATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLF 72 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHh----------hccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHH
Confidence 4678899999999887765432211 133445667788899999999999999999999999999999999
Q ss_pred hhHHHHHhhcC-----cCcccCCCchHHHHHHHHhcCccHHHHHHHHhh
Q 030858 123 PNAHYLVNATD-----RGEILTSRDNVGRWWGEISNRDSWKKVVDMQKQ 166 (170)
Q Consensus 123 ~~l~~~~~~~~-----~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~ 166 (170)
+.+.++..... +...+..+|+|.+|+++|.++|++++++.....
T Consensus 73 ~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~~~~ 121 (142)
T cd03190 73 TTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNFDHI 121 (142)
T ss_pred HHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcCchHhhhcCHHHH
Confidence 99876632211 112346899999999999999999998876543
No 28
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.73 E-value=8.5e-17 Score=103.13 Aligned_cols=117 Identities=24% Similarity=0.392 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHhcccCchhHHHHHHHHhcccc-CCCCChHHHHHHHHHHHHHHHHHHHH-hCCCCccccCCcchhhhchh
Q 030858 45 KASIDQWLEAEGQSFNPPSSALVFQLALAPRM-NIKQDEGVIKQNEEKLAKVLDVYEKR-LGESRFLAGDEFSLADLSHL 122 (170)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~le~~-L~~~~~l~G~~~t~aDi~~~ 122 (170)
++++++|+.|....+.+.+...+......+.. +....+...+.....+.+.++.+|++ +++++|++|+++|+|||+++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~ 81 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAV 81 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHH
Confidence 46688899988877776655544333332221 22345566778888999999999997 55579999999999999999
Q ss_pred hhHHHHHhhcCcCcccCCCchHHHHHHHHhc--CccHHHHHHH
Q 030858 123 PNAHYLVNATDRGEILTSRDNVGRWWGEISN--RDSWKKVVDM 163 (170)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~--~p~~~~~~~~ 163 (170)
+.+.+...... ...+.+|+|.+|+++|.+ ||+++++++.
T Consensus 82 ~~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~~~p~~~~~~~~ 122 (126)
T cd03183 82 CEIMQPEAAGY--DVFEGRPKLAAWRKRVKEAGNPLFDEAHKI 122 (126)
T ss_pred HHHHHHHhcCC--cccccCchHHHHHHHHHHhcchhHHHHHHH
Confidence 98877754332 235789999999999999 9999998754
No 29
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.72 E-value=7.5e-17 Score=102.67 Aligned_cols=116 Identities=16% Similarity=0.127 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhC--CCCccccCCcchhhhc
Q 030858 43 LAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLG--ESRFLAGDEFSLADLS 120 (170)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aDi~ 120 (170)
.+++.+++|+.+..+.+.+.+........... .+ ...+...+.....+.+.++.+|++|+ .++|++|+++|+|||+
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~ 79 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEE-LG-LDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADIC 79 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHH
Confidence 46899999999999888876444333222111 01 11223334455678999999999997 4589999999999999
Q ss_pred hhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHHHH
Q 030858 121 HLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVVDM 163 (170)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 163 (170)
+++.+.++..... ....+|+|.+|+++|.++|+|+++++.
T Consensus 80 ~~~~~~~~~~~~~---~~~~~p~l~~w~~~~~~~p~~~~~~~~ 119 (121)
T cd03191 80 LVPQVYNARRFGV---DLSPYPTIARINEACLELPAFQAAHPD 119 (121)
T ss_pred HHHHHHHHHHhCC---CcccCcHHHHHHHHHHhChhHHHhCcC
Confidence 9999887754322 257899999999999999999998653
No 30
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.72 E-value=1.7e-16 Score=99.20 Aligned_cols=109 Identities=23% Similarity=0.421 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhh
Q 030858 44 AKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLP 123 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~ 123 (170)
+++++++|+.+..+.+.+.+...+......+ .....+...+.....+.+.++.+|++|++++|++|+++|+||+++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~ 79 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTP--PEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGC 79 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCC--cccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHH
Confidence 4788999999998888887765543322221 22334556677888999999999999998999999999999999998
Q ss_pred hHHHHHhhcCcCcccCCCchHHHHHHHHhcCccH
Q 030858 124 NAHYLVNATDRGEILTSRDNVGRWWGEISNRDSW 157 (170)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 157 (170)
++....... ...+.+|+|.+|+++|.++|+|
T Consensus 80 ~~~~~~~~~---~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 80 SAYRWFELP---IERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHcc---cccccCchHHHHHHHHHhCCCC
Confidence 885433222 2357899999999999999975
No 31
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.72 E-value=1e-16 Score=99.83 Aligned_cols=105 Identities=17% Similarity=0.229 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchh
Q 030858 43 LAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHL 122 (170)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~ 122 (170)
.++++++.|+.+....+.+.+.... .+ . +...+.....+.+.+..+|+.|++++|++|+++|+|||+++
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~-----~~----~--~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~ 70 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIE-----KG----R--KKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALA 70 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-----hC----c--HHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHH
Confidence 4689999999998887766553332 11 1 34456778889999999999999999999999999999999
Q ss_pred hhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHH
Q 030858 123 PNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKV 160 (170)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 160 (170)
+.+.++...+. .....+|++.+|+++|.+||+++++
T Consensus 71 ~~~~~~~~~~~--~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 71 PLLWRLPALGI--ELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHcCC--CCcccchHHHHHHHHHHCCHHHHHh
Confidence 99865542222 2235799999999999999999875
No 32
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.72 E-value=6.4e-17 Score=103.65 Aligned_cols=112 Identities=16% Similarity=0.225 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchh
Q 030858 43 LAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHL 122 (170)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~ 122 (170)
.++++++.|+.+..+.+.+.+...+ .. . +...+.....+.+.++.+|++|++++|++|+++|+|||+++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~-----~~----~--~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~ 70 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVL-----AA----K--GEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALG 70 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH-----cc----c--hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHH
Confidence 4688999999998877765544322 11 1 33456678889999999999999899999999999999999
Q ss_pred hhHHHHHhhc--CcCc--ccCCCchHHHHHHHHhcCccHHHHHHHHh
Q 030858 123 PNAHYLVNAT--DRGE--ILTSRDNVGRWWGEISNRDSWKKVVDMQK 165 (170)
Q Consensus 123 ~~l~~~~~~~--~~~~--~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 165 (170)
+.+.++.... .+.. ..+.+|++.+|+++|.++|++++++...+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 117 (126)
T cd03185 71 SFLGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDRD 117 (126)
T ss_pred HHHHHHHHHHHHcCccccCcccCchHHHHHHHHHhccHHHHhCCCHH
Confidence 9998875321 1112 24679999999999999999999977654
No 33
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.71 E-value=8.1e-17 Score=102.76 Aligned_cols=118 Identities=24% Similarity=0.328 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhh
Q 030858 45 KASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPN 124 (170)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~ 124 (170)
++++++|+.+....+.+.+...+.... . ....+....+.....+.+.++.+|+.|+.++|++|+++|+||+++++.
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~ 77 (123)
T cd03181 2 EAQVLQWVSFANTELLPAVAAWFLPLL-G---IAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGA 77 (123)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHHc-C---ccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHH
Confidence 678899999998888877665443322 1 123344566778888999999999999999999999999999999999
Q ss_pred HHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHHHHHhh
Q 030858 125 AHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVVDMQKQ 166 (170)
Q Consensus 125 l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~ 166 (170)
+.++............+|++.+|++++.++|+|++++.+.+=
T Consensus 78 ~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~ 119 (123)
T cd03181 78 LLLGFTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFGEVKL 119 (123)
T ss_pred HHHHHHHHcCHHHHHhChHHHHHHHHHHcCHHHHHHcCCCCc
Confidence 988754322212346799999999999999999999876543
No 34
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.71 E-value=1.7e-16 Score=100.36 Aligned_cols=115 Identities=18% Similarity=0.279 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHHhcccCchhHHHHHHHHhcc-cc-CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhh
Q 030858 41 NPLAKASIDQWLEAEGQSFNPPSSALVFQLALAP-RM-NIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLAD 118 (170)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD 118 (170)
++..++.+++|+.+....+.+.+...+....... .. +....+...++....+.+.++.+|+.|++++|++|+++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 3568899999999988777665554332211111 00 123445677888899999999999999988999999999999
Q ss_pred hchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccH
Q 030858 119 LSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSW 157 (170)
Q Consensus 119 i~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 157 (170)
|++++.+.++...+. .....+|+|.+|++++.++|++
T Consensus 81 i~l~~~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKVVKL--RVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHhHHHHhcCC--CCccccHHHHHHHHHHHhccCC
Confidence 999999988765432 2346899999999999999974
No 35
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.70 E-value=3.7e-16 Score=99.13 Aligned_cols=114 Identities=20% Similarity=0.239 Sum_probs=85.4
Q ss_pred CCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhcccc----CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCc
Q 030858 39 GTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRM----NIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEF 114 (170)
Q Consensus 39 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~ 114 (170)
|.++.+++++++|+.+..+.+.+.+..........+.. +...++...+.....+.+.++.+|++|++++|++|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 46788999999999999888877655332222111100 00123344556677899999999999999999999999
Q ss_pred chhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCc
Q 030858 115 SLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRD 155 (170)
Q Consensus 115 t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 155 (170)
|+|||++++.+.++..... ....+|+|.+|+++|.++|
T Consensus 82 t~ADi~l~~~~~~~~~~~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 82 TAADIMMSFPLEAALARGP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CHHHHHHHHHHHHHHHcCc---ccccCchHHHHHHHHhcCC
Confidence 9999999998888754322 3678999999999999987
No 36
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.68 E-value=4.2e-16 Score=99.24 Aligned_cols=113 Identities=12% Similarity=0.134 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhh
Q 030858 44 AKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLP 123 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~ 123 (170)
++++++++++...+.... .... ++.+ ..+...+.....+.+.++.+|++|++++|++|+++|+||+++++
T Consensus 2 e~~~id~~~~~~~d~~~~-~~~~----~~~~-----~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~ 71 (121)
T cd03209 2 ERIRVDMLEQQAMDLRMG-LARI----CYSP-----DFEKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYE 71 (121)
T ss_pred chHHHHHHHHHHHHHHHH-HHHh----hcCc-----chHHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHH
Confidence 456777777755443211 1111 1111 11344566777889999999999998999999999999999999
Q ss_pred hHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHHHHHhhcC
Q 030858 124 NAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVVDMQKQQH 168 (170)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~ 168 (170)
++.++..... ..++.+|+|.+|+++|.++|+++++++.+....
T Consensus 72 ~~~~~~~~~~--~~~~~~P~l~~~~~rv~~~p~vk~~~~~~~~~~ 114 (121)
T cd03209 72 ALDQHRIFEP--DCLDAFPNLKDFLERFEALPKISAYMKSDRFIK 114 (121)
T ss_pred HHHHHHHhCc--cccccChHHHHHHHHHHHCHHHHHHHhcccCcC
Confidence 9988864322 346789999999999999999999998875443
No 37
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.68 E-value=4.4e-16 Score=98.72 Aligned_cols=112 Identities=20% Similarity=0.275 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhh
Q 030858 44 AKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLP 123 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~ 123 (170)
+++++++|+.+....+.+.+...++...... . ...+.....+.+.++.+|++|++++|++|+++|+||+++++
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~ 74 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGG----A---EPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVA 74 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcC----C---CCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHH
Confidence 4788899999887777765544443332211 1 12345667889999999999998899999999999999999
Q ss_pred hHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHHHHH
Q 030858 124 NAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVVDMQ 164 (170)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 164 (170)
++.++... .+ .....+|+|.+|+++|.++|++++.....
T Consensus 75 ~~~~~~~~-~~-~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 113 (118)
T cd03177 75 TVSTLEAL-LP-LDLSKYPNVRAWLERLKALPPYEEANGKG 113 (118)
T ss_pred HHHHHHHh-cC-CChhhCchHHHHHHHHHcccchHHHHHHH
Confidence 99888541 11 22467999999999999999999976443
No 38
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.67 E-value=1.2e-15 Score=99.00 Aligned_cols=78 Identities=23% Similarity=0.273 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHHHHH
Q 030858 87 QNEEKLAKVLDVYEKRLG--ESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVVDMQ 164 (170)
Q Consensus 87 ~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 164 (170)
.....+.+.++.+|++|+ +++|++|+++|+||+.+++.+.++..... ..+..+|+|.+|+++|.++|+++++++.+
T Consensus 39 ~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~~--~~l~~~P~l~~~~~rv~~~P~vk~~~~~~ 116 (137)
T cd03208 39 IKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELDP--SLLSDFPLLQAFKTRISNLPTIKKFLQPG 116 (137)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhch--hhhccChHHHHHHHHHHcCHHHHHHHhcC
Confidence 334456899999999998 67899999999999999999988754322 34678999999999999999999999876
Q ss_pred hh
Q 030858 165 KQ 166 (170)
Q Consensus 165 ~~ 166 (170)
..
T Consensus 117 ~~ 118 (137)
T cd03208 117 SP 118 (137)
T ss_pred CC
Confidence 64
No 39
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.65 E-value=1.4e-15 Score=97.41 Aligned_cols=83 Identities=18% Similarity=0.211 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC---CCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHH
Q 030858 84 VIKQNEEKLAKVLDVYEKRLGE---SRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKV 160 (170)
Q Consensus 84 ~~~~~~~~~~~~l~~le~~L~~---~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 160 (170)
..+.....+.+.+..+|+.|++ ++|++|+++|+||+++++++.++..... ..+..+|+|.+|+++|.++|+++++
T Consensus 32 ~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~~--~~~~~~P~l~~~~~rv~~~p~v~~~ 109 (126)
T cd03210 32 GKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLAP--GCLDAFPLLKAFVERLSARPKLKAY 109 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhCh--HhhhcChHHHHHHHHHHhCcHHHHH
Confidence 3456667789999999999974 5899999999999999999988764322 3467899999999999999999999
Q ss_pred HHHHhhcC
Q 030858 161 VDMQKQQH 168 (170)
Q Consensus 161 ~~~~~~~~ 168 (170)
++.+....
T Consensus 110 ~~~~~~~~ 117 (126)
T cd03210 110 LESDAFKN 117 (126)
T ss_pred HhCcCCCC
Confidence 98876544
No 40
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.64 E-value=1.2e-15 Score=97.46 Aligned_cols=110 Identities=16% Similarity=0.148 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCC--CCccccCCcchhhhch
Q 030858 44 AKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGE--SRFLAGDEFSLADLSH 121 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~~ 121 (170)
++++.+.|+++.+..+.+ +...+ .. ++..+...+.+.+.++.+|+.|++ ++|++|+++|+||+++
T Consensus 2 ~ra~~r~~~~~~~~~~~~-~~~~~----~~--------~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~ 68 (124)
T cd03184 2 EKAQQKLLLERFSKVVSA-FYKLL----GA--------PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMI 68 (124)
T ss_pred hHHHHHHHHHHHhhhhHH-HHHHH----hc--------cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHh
Confidence 478888899887643322 22222 11 223457777888999999999975 7999999999999999
Q ss_pred hhhHHHHHhhcCc---CcccCCCchHHHHHHHHhcCccHHHHHHHHhh
Q 030858 122 LPNAHYLVNATDR---GEILTSRDNVGRWWGEISNRDSWKKVVDMQKQ 166 (170)
Q Consensus 122 ~~~l~~~~~~~~~---~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~ 166 (170)
++++.++...... ....+.+|+|.+|+++|.++|++++++...+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~~ 116 (124)
T cd03184 69 WPWFERLEALKLLLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTEI 116 (124)
T ss_pred hHHHHHHHHHHhhccccCCcccChHHHHHHHHhccChHHHHHhCCHHH
Confidence 9999877544321 12357899999999999999999999876543
No 41
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.62 E-value=1.4e-15 Score=94.07 Aligned_cols=75 Identities=17% Similarity=0.297 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHHHH
Q 030858 85 IKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVVDM 163 (170)
Q Consensus 85 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 163 (170)
.+.....+...++.+|++|++++|++|+++|+|||++++.+.++.... ..+.+|+|.+|+++|.++|++++++++
T Consensus 28 ~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~~----~~~~~p~l~~w~~~~~~~p~~~~~~~~ 102 (103)
T cd03207 28 RMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQFG----LLPERPAFDAYIARITDRPAFQRAAAI 102 (103)
T ss_pred hhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHcC----CCCCChHHHHHHHHHHcCHHHHHHhcc
Confidence 456677899999999999999999999999999999999998886432 247899999999999999999998764
No 42
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.60 E-value=5.5e-15 Score=84.78 Aligned_cols=68 Identities=26% Similarity=0.417 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHH
Q 030858 83 GVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGE 150 (170)
Q Consensus 83 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~ 150 (170)
...++....+.+.++.+|++|++++|++|++||+||+++++++.++..........+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 45788899999999999999999999999999999999999999998776544556899999999986
No 43
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.60 E-value=2.6e-15 Score=93.12 Aligned_cols=104 Identities=24% Similarity=0.299 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhh
Q 030858 44 AKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLP 123 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~ 123 (170)
.++++++|+.+..+.+.+.+........+.+ ....++...+.....+.+.++.+|+.|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~ 79 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLG--LGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAA 79 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeecc--CCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHH
Confidence 5788999999988888776544322222212 23444566778899999999999999998899999999999999999
Q ss_pred hHHHHHhhcCcCcccCCCchHHHHHHHHh
Q 030858 124 NAHYLVNATDRGEILTSRDNVGRWWGEIS 152 (170)
Q Consensus 124 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~ 152 (170)
++.++..... ....+|+|.+|+++++
T Consensus 80 ~~~~~~~~~~---~~~~~p~l~~~~~~~~ 105 (105)
T cd03179 80 YTHVADEGGF---DLADYPAIRAWLARIE 105 (105)
T ss_pred HHHhccccCC---ChHhCccHHHHHHhhC
Confidence 9988754322 2577999999999874
No 44
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.60 E-value=5.7e-15 Score=89.96 Aligned_cols=73 Identities=23% Similarity=0.472 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCc
Q 030858 82 EGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRD 155 (170)
Q Consensus 82 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 155 (170)
+...+.....+.+.++.+++.|++++|++|+++|+||+++++.+.++........ .+++|+|.+|+++|.+||
T Consensus 23 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 23 EEMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcc-cccCHHHHHHHHHHHcCC
Confidence 4467788889999999999999999999999999999999999999987655311 389999999999999997
No 45
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.59 E-value=4.2e-15 Score=93.61 Aligned_cols=111 Identities=17% Similarity=0.118 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhC-CCCccccCCcchhhhch
Q 030858 43 LAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLG-ESRFLAGDEFSLADLSH 121 (170)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aDi~~ 121 (170)
.++++++.|+.+..+.+.+......++..+.. .......+.....+.+.++.+|..|+ +++|++| ++|+||+++
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l 76 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVVFAG----AKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDL 76 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccceecC----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHH
Confidence 46899999999999888764211111111111 11112345667777888999999995 4489999 599999999
Q ss_pred hhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHHHH
Q 030858 122 LPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVVDM 163 (170)
Q Consensus 122 ~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 163 (170)
++++.+....+.. +. |++.+|++||.+||+|+++++.
T Consensus 77 ~~~~~~~~~~g~~---l~--p~l~ay~~r~~~rPa~~~~~~~ 113 (114)
T cd03195 77 ALMLNRLVLNGDP---VP--ERLRDYARRQWQRPSVQAWLAL 113 (114)
T ss_pred HHHHHHHHHcCCC---CC--HHHHHHHHHHHCCHHHHHHHhc
Confidence 9999998765442 22 9999999999999999999863
No 46
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.59 E-value=9.4e-15 Score=89.91 Aligned_cols=99 Identities=18% Similarity=0.306 Sum_probs=73.3
Q ss_pred HHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHH
Q 030858 49 DQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYL 128 (170)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~ 128 (170)
++|+.+..+.+.+............. ....+.....+.+.++.+|+.|++++|++|+++|+||+.+++++.+.
T Consensus 2 ~~w~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~ 74 (100)
T cd03206 2 QRWLSVAAGEIANGPAAARLITLFGA-------PLDKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALA 74 (100)
T ss_pred ceehhhhhhhcccchhHHHHHHHhCC-------HhHHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHH
Confidence 45777777777654443333222211 11345678889999999999999999999999999999999988765
Q ss_pred HhhcCcCcccCCCchHHHHHHHHhcCccH
Q 030858 129 VNATDRGEILTSRDNVGRWWGEISNRDSW 157 (170)
Q Consensus 129 ~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 157 (170)
... ......+|+|.+|+++|.++|++
T Consensus 75 ~~~---~~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 75 PEG---GVDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred hcc---CCChhhCcHHHHHHHHHHhCcCC
Confidence 321 12357899999999999999975
No 47
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.59 E-value=9e-15 Score=93.65 Aligned_cols=86 Identities=23% Similarity=0.349 Sum_probs=69.9
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhCC----------------CCccccCCcchhhhchhhhHHHHHhhc---CcCcccC
Q 030858 79 KQDEGVIKQNEEKLAKVLDVYEKRLGE----------------SRFLAGDEFSLADLSHLPNAHYLVNAT---DRGEILT 139 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~~le~~L~~----------------~~~l~G~~~t~aDi~~~~~l~~~~~~~---~~~~~~~ 139 (170)
..+++..+.....+...|+.+|++|++ ++|++|+++|+|||.+++.+.++.... .+....+
T Consensus 21 ~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~ 100 (134)
T cd03198 21 NSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPA 100 (134)
T ss_pred CCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCccc
Confidence 344556778888999999999999986 679999999999999999987764321 1222347
Q ss_pred CCchHHHHHHHHhcCccHHHHHHHH
Q 030858 140 SRDNVGRWWGEISNRDSWKKVVDMQ 164 (170)
Q Consensus 140 ~~p~l~~w~~~~~~~p~~~~~~~~~ 164 (170)
.+|+|.+|+++|.+||+|++++...
T Consensus 101 ~~P~L~aw~~ri~aRPsfk~t~~~~ 125 (134)
T cd03198 101 DLTGLWRYLKNAYQREEFTNTCPAD 125 (134)
T ss_pred cCHHHHHHHHHHHCCHHHHHHcCCH
Confidence 8999999999999999999987655
No 48
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.58 E-value=3.1e-14 Score=98.59 Aligned_cols=146 Identities=13% Similarity=0.109 Sum_probs=97.9
Q ss_pred ccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCc---------------------
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNP--------------------- 61 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~--------------------- 61 (170)
|++|.++.||+.+.||.-|..+|.++++-.. . + .+++++..+++....++.+..
T Consensus 92 G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~--~-L--~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~ 166 (281)
T KOG4244|consen 92 GTLPFIELNGEHIADSDLIEDRLRKHFKIPD--D-L--SAEQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIG 166 (281)
T ss_pred CCcceEEeCCeeccccHHHHHHHHHHcCCCC--C-C--CHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccC
Confidence 7899999999999999999999999988632 1 2 344555555444333322221
Q ss_pred -------hhHHHHHHHHhccc----cCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHh
Q 030858 62 -------PSSALVFQLALAPR----MNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVN 130 (170)
Q Consensus 62 -------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~ 130 (170)
.+..+++...+... ..+.-..-..++..+.+.+.|+.+++.|++++|++|+++|-+|+.+|+.|..+..
T Consensus 167 l~~~l~~~l~~~~~~~~f~~kv~~r~~g~IG~f~~~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y 246 (281)
T KOG4244|consen 167 LPGFLFPLLLPLFWKAIFGKKVYKRSTGAIGDFESAEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY 246 (281)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHhhccccCcCHHHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec
Confidence 11111111111110 0001111123457777899999999999999999999999999999999988865
Q ss_pred hcCcCc----ccCCCchHHHHHHHHhcC
Q 030858 131 ATDRGE----ILTSRDNVGRWWGEISNR 154 (170)
Q Consensus 131 ~~~~~~----~~~~~p~l~~w~~~~~~~ 154 (170)
+.... ..+.+|+|.+|++||.+.
T Consensus 247 -P~~~~i~d~le~d~p~l~eYceRIr~~ 273 (281)
T KOG4244|consen 247 -PFRSHISDLLEGDFPNLLEYCERIRKE 273 (281)
T ss_pred -cCCCcHHHHHhhhchHHHHHHHHHHHH
Confidence 43321 245799999999999864
No 49
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.55 E-value=8.5e-14 Score=88.43 Aligned_cols=106 Identities=19% Similarity=0.302 Sum_probs=70.1
Q ss_pred CHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhC---CCCccccCCcchh
Q 030858 41 NPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLG---ESRFLAGDEFSLA 117 (170)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~G~~~t~a 117 (170)
++..|+.+++++.+... +.... +.+..++.. .. .+.+.++.+|+.|+ +++|++| ++|+|
T Consensus 1 d~~~ra~~~~~~~~~~~-----~~~~~----~~~~~~~~~-~~-------~~~~~l~~Le~~L~~~~~~~fl~G-~~tlA 62 (120)
T cd03203 1 DPAKREFADELLAYTDA-----FTKAL----YSSLIKGDP-SA-------EAAAALDYIENALSKFDDGPFFLG-QFSLV 62 (120)
T ss_pred CHHHHHHHHHHHHHHHH-----HHHHH----HHHHhcCCc-hH-------HHHHHHHHHHHHHHhcCCCCCcCC-CccHH
Confidence 35678999999887221 11122 222111121 11 22445666666665 4799999 99999
Q ss_pred hhchhhhHHHHHhh---cCcCcccCCCchHHHHHHHHhcCccHHHHHHHH
Q 030858 118 DLSHLPNAHYLVNA---TDRGEILTSRDNVGRWWGEISNRDSWKKVVDMQ 164 (170)
Q Consensus 118 Di~~~~~l~~~~~~---~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 164 (170)
||++++.+.++... ..+....+.+|+|.+|+++|.++|+++++....
T Consensus 63 Di~l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~~ 112 (120)
T cd03203 63 DIAYVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQDP 112 (120)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCCH
Confidence 99999998766421 112233468999999999999999999997643
No 50
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.55 E-value=3.2e-14 Score=88.40 Aligned_cols=79 Identities=27% Similarity=0.329 Sum_probs=65.3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhCCC----------CccccCCcchhhhchhhhHHHHHhhcCcCc--ccCCCchHHH
Q 030858 79 KQDEGVIKQNEEKLAKVLDVYEKRLGES----------RFLAGDEFSLADLSHLPNAHYLVNATDRGE--ILTSRDNVGR 146 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~~le~~L~~~----------~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~--~~~~~p~l~~ 146 (170)
..+....+.....+.+.++.+|++|+++ +|++|+++|+|||++++.+.++........ ....+|+|.+
T Consensus 21 ~~~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~ 100 (111)
T cd03204 21 HDNVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEA 100 (111)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHH
Confidence 4556677889999999999999999765 499999999999999999988865433211 1367999999
Q ss_pred HHHHHhcCccH
Q 030858 147 WWGEISNRDSW 157 (170)
Q Consensus 147 w~~~~~~~p~~ 157 (170)
|++||.+||+|
T Consensus 101 w~~rv~aRpsf 111 (111)
T cd03204 101 YFERVLQRESF 111 (111)
T ss_pred HHHHHHcCCCC
Confidence 99999999985
No 51
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.54 E-value=1.2e-13 Score=86.90 Aligned_cols=70 Identities=16% Similarity=0.222 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHh---CCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHHH
Q 030858 87 QNEEKLAKVLDVYEKRL---GESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVVD 162 (170)
Q Consensus 87 ~~~~~~~~~l~~le~~L---~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 162 (170)
.....+.+.+..++..| ++++|++|+ +|+||+++++.+.+....+. ...|+|.+|+++|.++|+++++++
T Consensus 41 ~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~~~-----~~~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 41 AVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTYGL-----PLSPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHcCC-----CCCHHHHHHHHHHHCCHHHHHHHh
Confidence 33444445555555544 567899999 99999999999988854322 123999999999999999999975
No 52
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.53 E-value=5.1e-14 Score=85.82 Aligned_cols=95 Identities=24% Similarity=0.364 Sum_probs=72.4
Q ss_pred HHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 030858 22 CRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEK 101 (170)
Q Consensus 22 ~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~ 101 (170)
++||++..+ +.|.+..+.+.++.|++.....+. . .........++.+|+
T Consensus 1 ~r~~~~~~~------~~~~~~~~~~~vd~~~d~~~~~l~------------------~-------~~~~~~~~~l~~le~ 49 (96)
T cd03200 1 ARFLYRLLG------PAPNAPNAATNIDSWVDTAIFQLA------------------E-------GSSKEKAAVLRALNS 49 (96)
T ss_pred CchHHHHhc------ccCCCchHHHHHHHHHHHHHHHHh------------------c-------CCHHHHHHHHHHHHH
Confidence 478888822 789999999999999985432221 0 123334567888999
Q ss_pred HhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhc
Q 030858 102 RLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISN 153 (170)
Q Consensus 102 ~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 153 (170)
+|++++|++|+++|+|||++++.+.+. . .....+|+|.+|++||.+
T Consensus 50 ~L~~~~fl~Gd~~tiADi~l~~~l~~~---~---~~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 50 ALGRSPWLVGSEFTVADIVSWCALLQT---G---LASAAPANVQRWLKSCEN 95 (96)
T ss_pred HHcCCCccCCCCCCHHHHHHHHHHHHc---c---cccccChHHHHHHHHHHh
Confidence 999999999999999999999887643 1 123679999999999975
No 53
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.51 E-value=3.8e-14 Score=90.00 Aligned_cols=80 Identities=25% Similarity=0.310 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHhCC-CCccccCCcchhhhchhhhHHHHHhh-cC--cCcccCCCchHHHHHHHHhcCccHHHHH
Q 030858 86 KQNEEKLAKVLDVYEKRLGE-SRFLAGDEFSLADLSHLPNAHYLVNA-TD--RGEILTSRDNVGRWWGEISNRDSWKKVV 161 (170)
Q Consensus 86 ~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~aDi~~~~~l~~~~~~-~~--~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 161 (170)
++....+.+.+..+|+.|++ ++|++|+++|+||+++++.+.++... .. +....+.+|+|.+|+++|.+||+|++++
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~ 108 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTK 108 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcC
Confidence 44556788899999999985 79999999999999999987666432 11 2123478999999999999999999987
Q ss_pred HHHh
Q 030858 162 DMQK 165 (170)
Q Consensus 162 ~~~~ 165 (170)
...+
T Consensus 109 ~~~~ 112 (121)
T cd03201 109 AEKE 112 (121)
T ss_pred CCHH
Confidence 7544
No 54
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.48 E-value=6.7e-14 Score=97.42 Aligned_cols=148 Identities=18% Similarity=0.203 Sum_probs=111.2
Q ss_pred cceeeeeCC---eEEechhHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCC
Q 030858 4 LYLVLGFNH---VILSESRAICRYVCENYPEK--GNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNI 78 (170)
Q Consensus 4 ~vP~L~~~~---~~l~eS~aI~~yL~~~~~~~--~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (170)
+||||-|.. .+=.||..|++-+...+++- ....|+|.. .+.+++.+.+++-+.+..-+ ++. |.
T Consensus 129 TVPVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~~--Lr~eId~~n~~Iy~~vNNGV--------Yk~--GF 196 (324)
T COG0435 129 TVPVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPEA--LRTEIDELNKWIYDTVNNGV--------YKA--GF 196 (324)
T ss_pred eEEEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCHH--HHHHHHHHHhhhcccccCce--------eee--cc
Confidence 689997643 34589999999997654431 113477744 67888888887655544322 222 45
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCc-----CcccCCCchHHHHHHHHhc
Q 030858 79 KQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDR-----GEILTSRDNVGRWWGEISN 153 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~-----~~~~~~~p~l~~w~~~~~~ 153 (170)
...+++.++....+-..|+.+|+.|+++.|++|+++|-||+.+|+.|.++.....+ ......||+|..|++.+.+
T Consensus 197 A~tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq 276 (324)
T COG0435 197 ATTQEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQ 276 (324)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhc
Confidence 56667788999999999999999999999999999999999999999877543321 1224459999999999999
Q ss_pred CccHHHHHHH
Q 030858 154 RDSWKKVVDM 163 (170)
Q Consensus 154 ~p~~~~~~~~ 163 (170)
.|.|+++...
T Consensus 277 ~pg~~~T~df 286 (324)
T COG0435 277 LPGFAETVDF 286 (324)
T ss_pred Ccccccccch
Confidence 9999987543
No 55
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.48 E-value=1.3e-13 Score=84.42 Aligned_cols=99 Identities=26% Similarity=0.418 Sum_probs=73.2
Q ss_pred HHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHH
Q 030858 49 DQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYL 128 (170)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~ 128 (170)
+.|+.+....+.+.+....+.... .....+...+...+.+.+.++.+|++|++++|++|+++|+||+++++++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~ 77 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFV----GPEVDEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARL 77 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeecc----CCCCCHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHH
Confidence 456677776666555444322211 1123455678888899999999999999999999999999999999999998
Q ss_pred HhhcCcCcccCCCchHHHHHHHH
Q 030858 129 VNATDRGEILTSRDNVGRWWGEI 151 (170)
Q Consensus 129 ~~~~~~~~~~~~~p~l~~w~~~~ 151 (170)
..........+.+|++.+|+++|
T Consensus 78 ~~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 78 DLLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHhhhhhhhhccCccHHHHHHhC
Confidence 76543211357899999999875
No 56
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.46 E-value=4.3e-13 Score=89.91 Aligned_cols=143 Identities=27% Similarity=0.318 Sum_probs=99.7
Q ss_pred ccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCCh
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDE 82 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (170)
+++|+|..|+..++||..|-++|+++++......+ .+.+.+.+-. + +...+..++ . ...+
T Consensus 59 ~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~---~~~E~asag~------d-iF~kF~~fi-----~-----ksk~ 118 (221)
T KOG1422|consen 59 GKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTL---APPESASAGS------D-IFAKFSAFI-----K-----KSKD 118 (221)
T ss_pred CCCCeEEeCCceeccHHHHHHHHHHhcCCCCCccc---CCHHHHhhHH------H-HHHHHHHHH-----h-----Cchh
Confidence 68999999999999999999999999998432221 1223332221 1 111111111 0 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC---CCccccCCcchhhhchhhhHHHHHhhc---CcCcccCCCchHHHHHHHHhcCcc
Q 030858 83 GVIKQNEEKLAKVLDVYEKRLGE---SRFLAGDEFSLADLSHLPNAHYLVNAT---DRGEILTSRDNVGRWWGEISNRDS 156 (170)
Q Consensus 83 ~~~~~~~~~~~~~l~~le~~L~~---~~~l~G~~~t~aDi~~~~~l~~~~~~~---~~~~~~~~~p~l~~w~~~~~~~p~ 156 (170)
...+.....+...|..|+++|+. ++|+-|+++|.||+.+.+=|..+.... .....-+..+.+.+|++.+.++.+
T Consensus 119 ~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~ 198 (221)
T KOG1422|consen 119 AANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDE 198 (221)
T ss_pred hccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHH
Confidence 23344555667778999999985 699999999999999999998775442 223455779999999999999999
Q ss_pred HHHHHHHHh
Q 030858 157 WKKVVDMQK 165 (170)
Q Consensus 157 ~~~~~~~~~ 165 (170)
|..+....+
T Consensus 199 F~~tcp~d~ 207 (221)
T KOG1422|consen 199 FTNTCPADQ 207 (221)
T ss_pred hhcCCchHH
Confidence 988766544
No 57
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.41 E-value=6e-13 Score=91.93 Aligned_cols=148 Identities=20% Similarity=0.202 Sum_probs=108.1
Q ss_pred ccceeeeeC---CeEEechhHHHHHHHHhCC---C-C--CCCCCCCCCHHHHHHHHHHHHHHhcccCchhHHHHHHHHhc
Q 030858 3 HLYLVLGFN---HVILSESRAICRYVCENYP---E-K--GNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALA 73 (170)
Q Consensus 3 ~~vP~L~~~---~~~l~eS~aI~~yL~~~~~---~-~--~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (170)
.+||||=|- ..+=.||..|++.+...+. + + ..-.|+| +..++.++++-+|+-+.+..-+ ++
T Consensus 122 fTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P--~~L~~~Ide~N~wvy~~INNGV--------Yk 191 (319)
T KOG2903|consen 122 FTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYP--SSLRAQIDETNSWVYDKINNGV--------YK 191 (319)
T ss_pred EEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCC--HHHHHHHhhhhceecccccCce--------ee
Confidence 479999663 3455899999999983322 2 1 1123666 4478888888888766554322 22
Q ss_pred cccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCC--ccccCCcchhhhchhhhHHHHHhhcC------cCcccCCCchHH
Q 030858 74 PRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESR--FLAGDEFSLADLSHLPNAHYLVNATD------RGEILTSRDNVG 145 (170)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~--~l~G~~~t~aDi~~~~~l~~~~~~~~------~~~~~~~~p~l~ 145 (170)
. |.....+..+.....+-..|+.+|+.|+++. |++|+.+|.|||.+|+.+.++..... .......||+|.
T Consensus 192 ~--GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~ 269 (319)
T KOG2903|consen 192 C--GFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLH 269 (319)
T ss_pred e--ccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHH
Confidence 2 4455666788888899999999999999876 99999999999999999876643321 113456899999
Q ss_pred HHHHHHhc-CccHHHHHH
Q 030858 146 RWWGEISN-RDSWKKVVD 162 (170)
Q Consensus 146 ~w~~~~~~-~p~~~~~~~ 162 (170)
.|.+++.. .|+++.+..
T Consensus 270 ~~lk~iY~~~~~~~~Ttd 287 (319)
T KOG2903|consen 270 NWLKNIYWNIPGFSSTTD 287 (319)
T ss_pred HHHHHHHhhccchhhccc
Confidence 99999998 798887754
No 58
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.35 E-value=2.1e-12 Score=79.22 Aligned_cols=65 Identities=32% Similarity=0.426 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCC--ccccCCcchhhhchhhhHHHHHhhcCcCccc-CCCchHHHHHHHHhc
Q 030858 84 VIKQNEEKLAKVLDVYEKRLGESR--FLAGDEFSLADLSHLPNAHYLVNATDRGEIL-TSRDNVGRWWGEISN 153 (170)
Q Consensus 84 ~~~~~~~~~~~~l~~le~~L~~~~--~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~-~~~p~l~~w~~~~~~ 153 (170)
..+.....+...++.++++|+++. |++|++||+||+++++.|..+... .+ +.+|+|.+|++||++
T Consensus 32 ~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~-----~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 32 SGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA-----DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC-----HHTTTCHHHHHHHHHHHT
T ss_pred hHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc-----ccccccHHHHHHHHhhcC
Confidence 457788889999999999998877 999999999999999999777532 12 689999999999974
No 59
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.34 E-value=4.4e-12 Score=76.13 Aligned_cols=68 Identities=19% Similarity=0.208 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcC----cccCCCchHHHHHHHHh
Q 030858 85 IKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRG----EILTSRDNVGRWWGEIS 152 (170)
Q Consensus 85 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~----~~~~~~p~l~~w~~~~~ 152 (170)
..+....+.+.++.+|+.|++++|++|+++|+|||++++.+.++....... ...+.+|+|.+|++||.
T Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 17 TREIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 346777889999999999999999999999999999999998876432211 13467999999999974
No 60
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.34 E-value=4.9e-12 Score=78.25 Aligned_cols=100 Identities=19% Similarity=0.242 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCC--CCccccCCcchhhhch
Q 030858 44 AKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGE--SRFLAGDEFSLADLSH 121 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~~ 121 (170)
++.+++.+++...+.... +...++ .+ .+....+...+.....+.+.++.+|++|++ ++|++|+++|+||+++
T Consensus 2 e~~~v~~~~~~~~d~~~~-~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l 75 (104)
T cd03192 2 EAARVDALVDTIADLRAE-FAKYFY----EK-DGEEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVV 75 (104)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHhh----cC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHH
Confidence 356777777765443222 222221 11 011123455677788899999999999987 8999999999999999
Q ss_pred hhhHHHHHhhcCcCcc-cCCCchHHHHHHHH
Q 030858 122 LPNAHYLVNATDRGEI-LTSRDNVGRWWGEI 151 (170)
Q Consensus 122 ~~~l~~~~~~~~~~~~-~~~~p~l~~w~~~~ 151 (170)
++++.++..... .. ...+|++.+|++++
T Consensus 76 ~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 76 FDVLDYLLYLDP--KLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHhhCc--hhhHHhChhHHHHHHhC
Confidence 999988864432 23 67899999999875
No 61
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.34 E-value=6.1e-12 Score=80.32 Aligned_cols=68 Identities=16% Similarity=0.200 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhc
Q 030858 85 IKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISN 153 (170)
Q Consensus 85 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 153 (170)
.+.....+.+.++.++++|++++|+.|+++|+||+++++.+.++.... +....+.+|++.+|++||.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~-~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVS-PFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcC-cccccccCChHHHHHHHHhc
Confidence 457778889999999999999999999999999999999998886532 22345789999999999976
No 62
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.30 E-value=3.9e-11 Score=80.38 Aligned_cols=147 Identities=14% Similarity=0.142 Sum_probs=106.4
Q ss_pred ccceeeeeCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCch------hHHHHHHHHhcccc
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPP------SSALVFQLALAPRM 76 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 76 (170)
|+||.|..+..+++|-.+|..+..++--.-+ ...+..+++.++.+++.+++.+..+ .....+..+..++.
T Consensus 66 G~vPllr~g~~~~aef~pIV~fVeak~~~l~----s~lsE~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~ 141 (257)
T KOG3027|consen 66 GKVPLLRIGKTLFAEFEPIVDFVEAKGVTLT----SWLSEDQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRY 141 (257)
T ss_pred CCCceeeecchhhhhhhHHHHHHHHhccchh----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhcc
Confidence 7899999999999999999999999865411 1245568888888888766544311 01111111222221
Q ss_pred C-------------------------CCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhh
Q 030858 77 N-------------------------IKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNA 131 (170)
Q Consensus 77 ~-------------------------~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~ 131 (170)
+ ..-+....++..+.+...++.|+..|+.++||.|+.||-+|..+|+++-.+...
T Consensus 142 gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt 221 (257)
T KOG3027|consen 142 GSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTT 221 (257)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhh
Confidence 1 112233456778888999999999999999999999999999999999888766
Q ss_pred cCcCc----ccCCCchHHHHHHHHhc
Q 030858 132 TDRGE----ILTSRDNVGRWWGEISN 153 (170)
Q Consensus 132 ~~~~~----~~~~~p~l~~w~~~~~~ 153 (170)
..... .+++|++|.++++|+++
T Consensus 222 ~Lpn~ela~~lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 222 RLPNMELANILKKYSNLLEFCRRIEQ 247 (257)
T ss_pred cCCcHHHHHHHHHhHHHHHHHHHHHH
Confidence 54322 35679999999999986
No 63
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.26 E-value=2.9e-11 Score=74.04 Aligned_cols=71 Identities=18% Similarity=0.309 Sum_probs=59.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHH
Q 030858 78 IKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEI 151 (170)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~ 151 (170)
....+...+.....+.+.++.+|++|++++| +++|+|||++++.+.+......+....+.+|+|.+|+++|
T Consensus 28 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 28 EKRSQPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred hhhChHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHhC
Confidence 4556667889999999999999999998888 8999999999999988864433323457899999999985
No 64
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=99.25 E-value=1.7e-10 Score=70.55 Aligned_cols=114 Identities=15% Similarity=0.134 Sum_probs=79.4
Q ss_pred CHHHHHHHHHHHHHHhcccCchhHHHHHHHHhccccCCCCChHHHHHHHHHHHHHHHHHHHHhCC-CCccccCCcchhhh
Q 030858 41 NPLAKASIDQWLEAEGQSFNPPSSALVFQLALAPRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGE-SRFLAGDEFSLADL 119 (170)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~aDi 119 (170)
|..+|++.+++..|..+.+.+.-.....+.++.. .......+.....+++.+...++.|.. ++|++|+ .|+||.
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~----~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~ 75 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRG----ARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADA 75 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS------------HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcC----CCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHH
Confidence 3568999999999999888776555444444332 222334567777788888889998876 5899996 999999
Q ss_pred chhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHHHHH
Q 030858 120 SHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVVDMQ 164 (170)
Q Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 164 (170)
.+++++.++...+. +-.+++..|.++.-++|+++++++..
T Consensus 76 dlA~ml~Rl~~~gd-----~vP~~l~~Ya~~qwqrpsVQ~Wla~~ 115 (117)
T PF14834_consen 76 DLALMLNRLVTYGD-----PVPERLADYAERQWQRPSVQRWLALS 115 (117)
T ss_dssp HHHHHHHHHHTTT---------HHHHHHHHHHHT-HHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-----CCCHHHHHHHHHHHCCHHHHHHHHHh
Confidence 99999999975432 45679999999999999999998764
No 65
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.23 E-value=1.4e-11 Score=78.75 Aligned_cols=69 Identities=16% Similarity=0.215 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCc----CcccCCCchHHHHHHHHh
Q 030858 84 VIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDR----GEILTSRDNVGRWWGEIS 152 (170)
Q Consensus 84 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~----~~~~~~~p~l~~w~~~~~ 152 (170)
..++......+.++.|++.|++++|++|++||.+|+.+++++..+...... ......+|+|.+|++||.
T Consensus 54 ~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 54 TLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 456888888999999999999999999999999999999999888644221 123668999999999984
No 66
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=99.18 E-value=8.3e-11 Score=76.22 Aligned_cols=72 Identities=24% Similarity=0.247 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcC----cccCCCchHHHHHHHHhc
Q 030858 82 EGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRG----EILTSRDNVGRWWGEISN 153 (170)
Q Consensus 82 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~----~~~~~~p~l~~w~~~~~~ 153 (170)
....++......+.++.+++.|++++|++|+++|.+|+.+++++..+....... ....++|+|.+|++||.+
T Consensus 59 ~~~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 59 TEVEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 345677788889999999999999999999999999999999987776433321 235689999999999975
No 67
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.10 E-value=6.2e-10 Score=78.12 Aligned_cols=49 Identities=20% Similarity=0.329 Sum_probs=40.8
Q ss_pred CCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhc
Q 030858 104 GESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISN 153 (170)
Q Consensus 104 ~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 153 (170)
.+++|+.|++|++||+.+|..|..+..+... ...-...++..|+-+|++
T Consensus 306 knr~flGG~kPnLaDLsvfGvl~sm~gc~af-kd~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 306 KNRPFLGGKKPNLADLSVFGVLRSMEGCQAF-KDCLQNTSIGEWYYRMEA 354 (370)
T ss_pred CCCCccCCCCCchhhhhhhhhhhHhhhhhHH-HHHHhcchHHHHHHHHHH
Confidence 5789999999999999999999999877543 334456789999999986
No 68
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.94 E-value=3.4e-09 Score=68.77 Aligned_cols=51 Identities=16% Similarity=0.274 Sum_probs=41.8
Q ss_pred HhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhc
Q 030858 102 RLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISN 153 (170)
Q Consensus 102 ~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 153 (170)
..++++|+.|++||+||+++++.+..+..... ...+..+|++.+|++||++
T Consensus 95 ~~~~~~FlaGd~ptIADisvyg~l~s~e~~~~-~~Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 95 LGKDRQFHGGSKPNLADLAVYGVLRSVEGHPA-FKDMVEETKIGEWYERMDA 145 (149)
T ss_pred hcCCCCccCCCCCCHHHHHHHHHHHHHHHhcc-ccchhhCcCHHHHHHHHHH
Confidence 34557899999999999999999988876532 2246789999999999986
No 69
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.87 E-value=7.4e-08 Score=68.86 Aligned_cols=148 Identities=16% Similarity=0.125 Sum_probs=100.8
Q ss_pred ccceeeee-CCeEEechhHHHHHHHHhCCCCCCCCCCCC-CHHHHHHHHHHHHHHhcccCchhHHHHHHH----------
Q 030858 3 HLYLVLGF-NHVILSESRAICRYVCENYPEKGNKGLFGT-NPLAKASIDQWLEAEGQSFNPPSSALVFQL---------- 70 (170)
Q Consensus 3 ~~vP~L~~-~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 70 (170)
|++|+|+. +|..++.-.-|..+|...-.+.. +.+. ...+.+.+..|+++....+.+++...++-.
T Consensus 48 g~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~---~d~dl~~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk 124 (313)
T KOG3028|consen 48 GKLPYLITDNGTKVAGPVKIVQFLKKNTKKYN---LDADLSAKQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKK 124 (313)
T ss_pred CCCCeEEecCCceeccHHHHHHHHHHhcccCC---cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHH
Confidence 78999985 56999999999999998422211 2222 245677788888877776665544332221
Q ss_pred Hhc-----ccc-----------------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHH
Q 030858 71 ALA-----PRM-----------------NIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYL 128 (170)
Q Consensus 71 ~~~-----~~~-----------------~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~ 128 (170)
++. |.. -.+...+..++......+.++.+++.|+++.|++|+++|--|..++..+..+
T Consensus 125 ~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~ 204 (313)
T KOG3028|consen 125 WYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAIL 204 (313)
T ss_pred HHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHH
Confidence 111 000 0111122345566677889999999999999999999999999999999886
Q ss_pred HhhcCcCc----ccCCCchHHHHHHHHhc
Q 030858 129 VNATDRGE----ILTSRDNVGRWWGEISN 153 (170)
Q Consensus 129 ~~~~~~~~----~~~~~p~l~~w~~~~~~ 153 (170)
........ .+...++|.++++++.+
T Consensus 205 ~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 205 LQVALPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HhccCCchhHHHHHHhcchHHHHHHHHHH
Confidence 65554322 23349999999999876
No 70
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=98.71 E-value=4.9e-08 Score=64.24 Aligned_cols=143 Identities=16% Similarity=0.144 Sum_probs=87.4
Q ss_pred cceeee-eCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----ccCchhHHHHHHH--------
Q 030858 4 LYLVLG-FNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQ----SFNPPSSALVFQL-------- 70 (170)
Q Consensus 4 ~vP~L~-~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-------- 70 (170)
.||+|+ ++|..+.||..|.+|+++..++. +.. ...+..++.|+..+.. .+.|-+.......
T Consensus 47 qVPiL~Kedg~~m~ESlDIV~y~d~~~~~~----~lt--~~~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~ 120 (215)
T COG2999 47 QVPILQKEDGRAMPESLDIVHYVDELDGKP----LLT--GKVRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARK 120 (215)
T ss_pred ccceEEccccccchhhhHHHHHHHHhcCch----hhc--cCcCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHH
Confidence 489997 68899999999999999999862 222 2234455555553332 2222111111000
Q ss_pred -Hhcc--ccCCCCC--hHHHHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHH
Q 030858 71 -ALAP--RMNIKQD--EGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVG 145 (170)
Q Consensus 71 -~~~~--~~~~~~~--~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~ 145 (170)
+... ...+... -........++...++.++..+....=+-| .+|.-|+.+|+.|+.+... .+ ..-..++.
T Consensus 121 yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l~~Li~~~s~~n~-~l~~ddi~vFplLRnlt~v-~g---i~wps~v~ 195 (215)
T COG2999 121 YFTDKKEASEGSFESLLNHTAQYLKRIQADLRALDKLIVGPSAVNG-ELSEDDILVFPLLRNLTLV-AG---IQWPSRVA 195 (215)
T ss_pred HHHhhhhhccccHHHHHhchHHHHHHHHHHHHHHHHHhcCcchhcc-ccchhhhhhhHHhccceec-cc---CCCcHHHH
Confidence 0000 0000111 112456677888889999988866552333 5999999999999887533 33 34456899
Q ss_pred HHHHHHhcCccH
Q 030858 146 RWWGEISNRDSW 157 (170)
Q Consensus 146 ~w~~~~~~~p~~ 157 (170)
.|+++|.+...+
T Consensus 196 dy~~~msektqV 207 (215)
T COG2999 196 DYRDNMSEKTQV 207 (215)
T ss_pred HHHHHHHHhhCc
Confidence 999999876554
No 71
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=98.70 E-value=1.6e-08 Score=59.79 Aligned_cols=28 Identities=25% Similarity=0.196 Sum_probs=25.8
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENY 29 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~ 29 (170)
+++||+|+++|.+|+||.||++||++++
T Consensus 55 ~g~vP~L~~~g~~l~ES~AIl~YLa~~~ 82 (82)
T cd03075 55 FPNLPYYIDGDVKLTQSNAILRYIARKH 82 (82)
T ss_pred CCCCCEEEECCEEEeehHHHHHHHhhcC
Confidence 4799999999999999999999999864
No 72
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=98.70 E-value=2e-08 Score=58.88 Aligned_cols=29 Identities=21% Similarity=0.409 Sum_probs=27.2
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYP 30 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~ 30 (170)
.++||+|++||.+|+||.||++||+++++
T Consensus 49 ~g~vP~L~~~g~~l~ES~AI~~YL~~~~~ 77 (79)
T cd03077 49 FQQVPMVEIDGMKLVQTRAILNYIAGKYN 77 (79)
T ss_pred CCCCCEEEECCEEEeeHHHHHHHHHHHcC
Confidence 57999999999999999999999999987
No 73
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=98.61 E-value=6.4e-08 Score=56.13 Aligned_cols=30 Identities=33% Similarity=0.370 Sum_probs=28.2
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYPE 31 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~ 31 (170)
-++||+|+++|.+++||.+|++||++.+++
T Consensus 44 ~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~ 73 (75)
T PF13417_consen 44 KGKVPVLVDDGEVLTDSAAIIEYLEERYPG 73 (75)
T ss_dssp TSBSSEEEETTEEEESHHHHHHHHHHHSTS
T ss_pred cccceEEEECCEEEeCHHHHHHHHHHHcCC
Confidence 379999999999999999999999999986
No 74
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=98.54 E-value=1.1e-07 Score=55.20 Aligned_cols=29 Identities=34% Similarity=0.411 Sum_probs=26.8
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYP 30 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~ 30 (170)
.++||+|+++|.+++||.+|++||+++++
T Consensus 48 ~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 48 LGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 47899999999999999999999999875
No 75
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=98.49 E-value=1.6e-07 Score=54.57 Aligned_cols=28 Identities=25% Similarity=0.292 Sum_probs=25.8
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENY 29 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~ 29 (170)
.++||+|+++|.+++||.||++||+++|
T Consensus 49 ~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 49 FGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 4789999999999999999999999875
No 76
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=98.49 E-value=1.5e-07 Score=54.57 Aligned_cols=29 Identities=17% Similarity=0.144 Sum_probs=26.9
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYP 30 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~ 30 (170)
.++||+|+++|.+++||.+|++||+++|+
T Consensus 47 ~g~vPvl~~~g~~l~eS~~I~~yL~~~~~ 75 (75)
T cd03080 47 KGKLPFIELNGEKIADSELIIDHLEEKYG 75 (75)
T ss_pred CCCCCEEEECCEEEcCHHHHHHHHHHHcC
Confidence 47999999999999999999999999875
No 77
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=98.45 E-value=2.4e-07 Score=54.51 Aligned_cols=30 Identities=23% Similarity=0.183 Sum_probs=26.9
Q ss_pred CccceeeeeC---CeEEechhHHHHHHHHhCCC
Q 030858 2 IHLYLVLGFN---HVILSESRAICRYVCENYPE 31 (170)
Q Consensus 2 ~~~vP~L~~~---~~~l~eS~aI~~yL~~~~~~ 31 (170)
.++||+|+++ |.+|+||.+|++||++++++
T Consensus 49 ~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~~ 81 (81)
T cd03048 49 NGRIPAIVDHNGTPLTVFESGAILLYLAEKYDK 81 (81)
T ss_pred CCCCCEEEeCCCCceEEEcHHHHHHHHHHHhCC
Confidence 4789999987 79999999999999999873
No 78
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=98.44 E-value=2.4e-07 Score=53.86 Aligned_cols=25 Identities=32% Similarity=0.345 Sum_probs=23.8
Q ss_pred ccceeeeeC-CeEEechhHHHHHHHH
Q 030858 3 HLYLVLGFN-HVILSESRAICRYVCE 27 (170)
Q Consensus 3 ~~vP~L~~~-~~~l~eS~aI~~yL~~ 27 (170)
|+||+|+++ |.+|+||.||++||++
T Consensus 51 g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 51 GKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp SSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred ceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 899999998 9999999999999985
No 79
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=98.44 E-value=2.4e-07 Score=53.93 Aligned_cols=29 Identities=28% Similarity=0.330 Sum_probs=26.1
Q ss_pred CccceeeeeC-CeEEechhHHHHHHHHhCC
Q 030858 2 IHLYLVLGFN-HVILSESRAICRYVCENYP 30 (170)
Q Consensus 2 ~~~vP~L~~~-~~~l~eS~aI~~yL~~~~~ 30 (170)
.++||+|+++ |.+++||.+|++||++++|
T Consensus 48 ~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 48 KGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 4789999976 8999999999999999875
No 80
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=98.42 E-value=2.4e-07 Score=54.88 Aligned_cols=29 Identities=28% Similarity=0.348 Sum_probs=26.5
Q ss_pred CccceeeeeC-CeEEechhHHHHHHHHhCC
Q 030858 2 IHLYLVLGFN-HVILSESRAICRYVCENYP 30 (170)
Q Consensus 2 ~~~vP~L~~~-~~~l~eS~aI~~yL~~~~~ 30 (170)
.++||+|+++ |.+++||.+|++||+++|+
T Consensus 55 ~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 55 FYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 4789999988 8999999999999999875
No 81
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=98.41 E-value=3.4e-07 Score=54.80 Aligned_cols=30 Identities=13% Similarity=0.061 Sum_probs=28.1
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhCCC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENYPE 31 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~~~ 31 (170)
.|+||+|.++|.+|+||.+|++||+++++.
T Consensus 59 ~g~vPvL~~~~~~i~eS~~I~eYLde~~~~ 88 (91)
T cd03061 59 GTQPPFLLYNGEVKTDNNKIEEFLEETLCP 88 (91)
T ss_pred CCCCCEEEECCEEecCHHHHHHHHHHHccC
Confidence 489999999999999999999999999875
No 82
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=98.40 E-value=2.6e-07 Score=53.23 Aligned_cols=27 Identities=19% Similarity=0.122 Sum_probs=24.6
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHh
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCEN 28 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~ 28 (170)
.++||+|+++|.+++||.+|++||+++
T Consensus 47 ~~~vP~l~~~~~~l~es~aI~~yL~~~ 73 (73)
T cd03076 47 FGQLPCFKDGDLTLVQSNAILRHLGRK 73 (73)
T ss_pred CCCCCEEEECCEEEEcHHHHHHHHhcC
Confidence 478999999999999999999999863
No 83
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.38 E-value=3.2e-07 Score=52.72 Aligned_cols=26 Identities=19% Similarity=0.195 Sum_probs=24.2
Q ss_pred ccceeeeeCCeEEechhHHHHHHHHh
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCEN 28 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~~ 28 (170)
|+||+|++||.+|+||.+|+.||.++
T Consensus 49 GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 49 GKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred CcccEEEECCEEEeCHHHHHHHHhcC
Confidence 79999999999999999999999864
No 84
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=98.38 E-value=4.3e-07 Score=52.44 Aligned_cols=27 Identities=30% Similarity=0.269 Sum_probs=25.0
Q ss_pred ccceeeeeCCeEEechhHHHHHHHHhC
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCENY 29 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~~~ 29 (170)
++||+|+++|.+++||.+|++||++++
T Consensus 48 ~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 48 KKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 789999999999999999999999864
No 85
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=98.37 E-value=2.9e-07 Score=53.05 Aligned_cols=25 Identities=20% Similarity=0.162 Sum_probs=23.2
Q ss_pred CccceeeeeCCeEEechhHHHHHHH
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVC 26 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~ 26 (170)
.|+||+|+++|.+++||.+|++||+
T Consensus 49 ~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 49 TGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CCCCCEEEECCEEEEcHHHHHHHhC
Confidence 3799999999999999999999985
No 86
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=98.37 E-value=5.2e-07 Score=51.84 Aligned_cols=28 Identities=29% Similarity=0.307 Sum_probs=25.7
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHhC
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCENY 29 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~~ 29 (170)
.++||+|+++|..++||.+|++||++++
T Consensus 46 ~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 46 YGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 4789999999999999999999999875
No 87
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=98.28 E-value=9.4e-07 Score=50.48 Aligned_cols=26 Identities=31% Similarity=0.220 Sum_probs=22.9
Q ss_pred Cccceeeee-CCeEEechhHHHHHHHH
Q 030858 2 IHLYLVLGF-NHVILSESRAICRYVCE 27 (170)
Q Consensus 2 ~~~vP~L~~-~~~~l~eS~aI~~yL~~ 27 (170)
.++||+|++ +|.+++||.+|++||++
T Consensus 43 ~~~VP~L~~~~g~vi~eS~~I~~yL~~ 69 (70)
T PF13409_consen 43 RGKVPVLVDPDGTVINESLAILEYLEE 69 (70)
T ss_dssp T-SSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CeEEEEEEECCCCEeeCHHHHHHHHhc
Confidence 379999997 78999999999999986
No 88
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=98.27 E-value=7.9e-07 Score=51.02 Aligned_cols=26 Identities=31% Similarity=0.387 Sum_probs=23.9
Q ss_pred CccceeeeeCCeEEechhHHHHHHHH
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCE 27 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~ 27 (170)
.++||+|+++|.+++||.+|++||++
T Consensus 47 ~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 47 FGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CCCCCEEEECCEEEEecHHHHHHhhC
Confidence 47999999999999999999999974
No 89
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=98.26 E-value=9.4e-07 Score=51.21 Aligned_cols=27 Identities=37% Similarity=0.385 Sum_probs=24.7
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHh
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCEN 28 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~ 28 (170)
.++||+|+++|.+++||.+|++||+++
T Consensus 50 ~~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 50 FGQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred CCCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 478999999999999999999999863
No 90
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.24 E-value=1.3e-06 Score=50.84 Aligned_cols=27 Identities=26% Similarity=0.231 Sum_probs=24.0
Q ss_pred ccceeeee--CCeEEechhHHHHHHHHhC
Q 030858 3 HLYLVLGF--NHVILSESRAICRYVCENY 29 (170)
Q Consensus 3 ~~vP~L~~--~~~~l~eS~aI~~yL~~~~ 29 (170)
++||+|++ +|.+++||.+|++||+++|
T Consensus 49 ~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 49 VQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred CcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 78999986 4689999999999999875
No 91
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=98.23 E-value=1.1e-06 Score=50.58 Aligned_cols=26 Identities=38% Similarity=0.309 Sum_probs=23.8
Q ss_pred CccceeeeeCCeEEechhHHHHHHHH
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCE 27 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~ 27 (170)
.++||+|+++|.+++||.||++||++
T Consensus 49 ~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 49 QHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 47899999999999999999999974
No 92
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=98.22 E-value=1.1e-06 Score=50.58 Aligned_cols=25 Identities=36% Similarity=0.305 Sum_probs=23.2
Q ss_pred CccceeeeeCCeEEechhHHHHHHH
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVC 26 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~ 26 (170)
.++||+|+++|.+|+||.+|++||+
T Consensus 49 ~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 49 NGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CCCCCEEEECCEEEECHHHHHHHhC
Confidence 4799999999999999999999984
No 93
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=98.14 E-value=2.8e-06 Score=49.38 Aligned_cols=28 Identities=14% Similarity=0.025 Sum_probs=24.6
Q ss_pred ccceeeeeC----CeEEechhHHHHHHHHhCC
Q 030858 3 HLYLVLGFN----HVILSESRAICRYVCENYP 30 (170)
Q Consensus 3 ~~vP~L~~~----~~~l~eS~aI~~yL~~~~~ 30 (170)
++||+|+++ |.+++||.+|++||++..+
T Consensus 46 ~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~~ 77 (77)
T cd03040 46 KKVPILRVESGGDGQQLVDSSVIISTLKTYLG 77 (77)
T ss_pred CccCEEEECCCCCccEEEcHHHHHHHHHHHcC
Confidence 689999865 7899999999999998754
No 94
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.11 E-value=2.5e-06 Score=49.15 Aligned_cols=25 Identities=28% Similarity=0.360 Sum_probs=23.2
Q ss_pred CccceeeeeCCeEEechhHHHHHHH
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVC 26 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~ 26 (170)
.++||+|+++|.+++||.+|++||+
T Consensus 49 ~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 49 TGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCcCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999984
No 95
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=98.08 E-value=2.7e-06 Score=48.74 Aligned_cols=25 Identities=28% Similarity=0.321 Sum_probs=23.0
Q ss_pred CccceeeeeCCeEEechhHHHHHHH
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVC 26 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~ 26 (170)
.+++|+|+++|.+++||.||++||+
T Consensus 49 ~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 49 QGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CCCCCEEEECCEEEEcHHHHHHHhC
Confidence 3789999999999999999999985
No 96
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=98.05 E-value=4.4e-06 Score=47.86 Aligned_cols=27 Identities=19% Similarity=0.226 Sum_probs=24.7
Q ss_pred CccceeeeeCCeEEechhHHHHHHHHh
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVCEN 28 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~~~ 28 (170)
.++||+|+++|..++||.+|++||+++
T Consensus 46 ~g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 46 TGKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred CcccCEEEECCEEEcCHHHHHHHHhhC
Confidence 378999999999999999999999874
No 97
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=98.03 E-value=4.4e-06 Score=48.31 Aligned_cols=26 Identities=27% Similarity=0.217 Sum_probs=23.2
Q ss_pred Cccceeeee-CCeEEechhHHHHHHHH
Q 030858 2 IHLYLVLGF-NHVILSESRAICRYVCE 27 (170)
Q Consensus 2 ~~~vP~L~~-~~~~l~eS~aI~~yL~~ 27 (170)
.++||+|++ +|.+|+||.||++||++
T Consensus 48 ~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 48 LGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred CCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 478999996 58999999999999986
No 98
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.01 E-value=4.9e-06 Score=47.66 Aligned_cols=25 Identities=32% Similarity=0.325 Sum_probs=22.9
Q ss_pred CccceeeeeCCeEEechhHHHHHHH
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVC 26 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~ 26 (170)
.+++|+|+++|.+++||.+|++||+
T Consensus 49 ~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 49 NGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4789999999999999999999984
No 99
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=98.01 E-value=4.5e-06 Score=47.70 Aligned_cols=25 Identities=20% Similarity=0.250 Sum_probs=22.5
Q ss_pred ccceeeeeC-CeEEechhHHHHHHHH
Q 030858 3 HLYLVLGFN-HVILSESRAICRYVCE 27 (170)
Q Consensus 3 ~~vP~L~~~-~~~l~eS~aI~~yL~~ 27 (170)
++||+|+++ |..++||.+|++||++
T Consensus 46 ~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 46 KQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CccCEEEeCCCeEeehHHHHHHHHhC
Confidence 689999875 8999999999999974
No 100
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=97.88 E-value=8.5e-06 Score=46.77 Aligned_cols=25 Identities=28% Similarity=0.320 Sum_probs=22.2
Q ss_pred Cccceeee-eCCeEEechhHHHHHHH
Q 030858 2 IHLYLVLG-FNHVILSESRAICRYVC 26 (170)
Q Consensus 2 ~~~vP~L~-~~~~~l~eS~aI~~yL~ 26 (170)
.++||+|+ ++|..++||.+|++||+
T Consensus 48 ~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 48 LGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CCCCCEEEECCCCEEECHHHHHhhhC
Confidence 47899998 57899999999999985
No 101
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=97.85 E-value=1.4e-05 Score=45.66 Aligned_cols=24 Identities=25% Similarity=0.256 Sum_probs=21.5
Q ss_pred CccceeeeeC-CeEEechhHHHHHH
Q 030858 2 IHLYLVLGFN-HVILSESRAICRYV 25 (170)
Q Consensus 2 ~~~vP~L~~~-~~~l~eS~aI~~yL 25 (170)
.++||+|+++ |..++||.+|++|+
T Consensus 46 ~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 46 KGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred CCCCCEEEECCCcEEecHHHHHHhh
Confidence 3799999974 89999999999997
No 102
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.81 E-value=7.4e-05 Score=47.83 Aligned_cols=68 Identities=18% Similarity=0.194 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccH
Q 030858 85 IKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSW 157 (170)
Q Consensus 85 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 157 (170)
..+...+++..|..++..+......-| ++|+-||.+|+.|+.+... .+ +.-.|++.+|+++|.+...+
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltiv-kg---i~~P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIV-KG---IQWPPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTC-TT---S---HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhc-cC---CcCCHHHHHHHHHHHHHcCC
Confidence 356667777888888888875455445 8999999999999888543 33 45678999999999876544
No 103
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=97.81 E-value=1.3e-05 Score=45.86 Aligned_cols=25 Identities=36% Similarity=0.486 Sum_probs=21.9
Q ss_pred Cccceeee-eCCeEEechhHHHHHHH
Q 030858 2 IHLYLVLG-FNHVILSESRAICRYVC 26 (170)
Q Consensus 2 ~~~vP~L~-~~~~~l~eS~aI~~yL~ 26 (170)
.++||+|+ ++|..++||.+|++||+
T Consensus 49 ~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 49 AGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 36899998 57889999999999985
No 104
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=97.64 E-value=4.4e-05 Score=42.80 Aligned_cols=25 Identities=32% Similarity=0.353 Sum_probs=22.7
Q ss_pred CccceeeeeCCeEEechhHHHHHHH
Q 030858 2 IHLYLVLGFNHVILSESRAICRYVC 26 (170)
Q Consensus 2 ~~~vP~L~~~~~~l~eS~aI~~yL~ 26 (170)
.+++|+|.++|..++||.+|++||+
T Consensus 47 ~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 47 LGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CCCCCEEEECCEEEEcHHHHHHHhC
Confidence 3689999999999999999999984
No 105
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.55 E-value=0.00039 Score=44.21 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccH
Q 030858 86 KQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSW 157 (170)
Q Consensus 86 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 157 (170)
.+...+++..|..++..+..... +++.+|+-||.+|++|+.+... .+ ..-.|++.+|+++|.+...+
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt~v-kg---i~~P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 59 PQYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLTLV-KG---LVFPPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhhhh-cC---CCCCHHHHHHHHHHHHHhCC
Confidence 46667788888888888854343 4567999999999999888643 22 45568999999999886543
No 106
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=97.54 E-value=5.7e-05 Score=58.27 Aligned_cols=73 Identities=22% Similarity=0.298 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHHHHH
Q 030858 89 EEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWKKVV 161 (170)
Q Consensus 89 ~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 161 (170)
...+...+..++.+|.-+.|++|.++|+||++++..+..-..+.........+-++.+|++-.+..++.+.+.
T Consensus 90 ~~~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~~~~a~~~v~ 162 (712)
T KOG1147|consen 90 FDEISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPEFQEAHNKVL 162 (712)
T ss_pred hHHHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHhHHHHHHHHH
Confidence 3445667788888888889999999999999999998654222111112346889999999554445555444
No 107
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=97.46 E-value=0.00015 Score=41.69 Aligned_cols=26 Identities=15% Similarity=0.083 Sum_probs=24.5
Q ss_pred ccceeeeeCCeEEechhHHHHHHHHh
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCEN 28 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~~ 28 (170)
|++|+|++++..+.||..|++||.++
T Consensus 47 gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 47 GKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CccCEEEECCEEecChHHHHHHHHHc
Confidence 79999999999999999999999874
No 108
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=94.81 E-value=0.035 Score=31.70 Aligned_cols=23 Identities=22% Similarity=0.069 Sum_probs=21.8
Q ss_pred ccceeeee-CCeEEechhHHHHHH
Q 030858 3 HLYLVLGF-NHVILSESRAICRYV 25 (170)
Q Consensus 3 ~~vP~L~~-~~~~l~eS~aI~~yL 25 (170)
|++|+|.+ ++..+.+-..|++||
T Consensus 48 g~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 48 GELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred CCCCEEEECCCcEEECHHHHHHhh
Confidence 78999999 899999999999998
No 109
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=94.28 E-value=0.068 Score=35.93 Aligned_cols=38 Identities=29% Similarity=0.354 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhCCC---CccccCC-cchhhhchhhhHHHHH
Q 030858 92 LAKVLDVYEKRLGES---RFLAGDE-FSLADLSHLPNAHYLV 129 (170)
Q Consensus 92 ~~~~l~~le~~L~~~---~~l~G~~-~t~aDi~~~~~l~~~~ 129 (170)
-.+++..+++.|++. .|++|+. +|-+||.+++.|.-+.
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l 154 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLL 154 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 467888999999988 9999987 9999999999996654
No 110
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=88.94 E-value=0.45 Score=26.78 Aligned_cols=24 Identities=8% Similarity=0.095 Sum_probs=21.5
Q ss_pred ccceeeeeCCeEEechhHHHHHHH
Q 030858 3 HLYLVLGFNHVILSESRAICRYVC 26 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~ 26 (170)
..+|++..||..+.++..|.+||+
T Consensus 49 ~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 49 MTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred CCcCeEEECCEEEeCHHHHHHHhC
Confidence 369999999999999999999974
No 111
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=85.03 E-value=1.2 Score=31.29 Aligned_cols=59 Identities=17% Similarity=0.237 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhcCccHH
Q 030858 93 AKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISNRDSWK 158 (170)
Q Consensus 93 ~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~ 158 (170)
...++.++..|.+..|.-|..++-+|+.+|..+. .. ..-..+++..+|+..+.+.-.+.
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~----~e---p~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALG----VE---PQSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcc----cC---cchhhhhHHHHHHHHHHHHHHHH
Confidence 5678899999999999999999999999877651 11 12355777888888887755444
No 112
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=84.63 E-value=1.6 Score=25.60 Aligned_cols=28 Identities=11% Similarity=0.044 Sum_probs=25.3
Q ss_pred ccceeeeeCCeEEechhHHHHHHHHhCC
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCENYP 30 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~~~~ 30 (170)
..||++..+|..+.++..|.+++.++++
T Consensus 56 ~tVP~ifi~g~~igG~~dl~~~~~~~~~ 83 (86)
T TIGR02183 56 ETVPQIFVDEKHVGGCTDFEQLVKENFD 83 (86)
T ss_pred CCcCeEEECCEEecCHHHHHHHHHhccc
Confidence 4799999999999999999999988765
No 113
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=83.80 E-value=0.66 Score=29.24 Aligned_cols=26 Identities=27% Similarity=0.365 Sum_probs=13.1
Q ss_pred eeeee--CCeEEechhHHHHHHHHhCCC
Q 030858 6 LVLGF--NHVILSESRAICRYVCENYPE 31 (170)
Q Consensus 6 P~L~~--~~~~l~eS~aI~~yL~~~~~~ 31 (170)
|-|.+ +|+.++|..||++||..-|.+
T Consensus 37 ~~L~~~~~gF~L~e~NAIvrYl~nDF~~ 64 (122)
T PF09635_consen 37 PLLKDKKSGFELFEPNAIVRYLANDFEG 64 (122)
T ss_dssp --EEE-S--S----HHHHHHHHTT--TT
T ss_pred ceeeecCCceEEecccHHHHHHHhhcCC
Confidence 66643 579999999999999986664
No 114
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=81.99 E-value=2.6 Score=24.49 Aligned_cols=28 Identities=14% Similarity=0.062 Sum_probs=25.0
Q ss_pred ccceeeeeCCeEEechhHHHHHHHHhCC
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCENYP 30 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~~~~ 30 (170)
..||++..||..+.+...|.+++.+.++
T Consensus 57 ~~vP~ifi~g~~igg~~~~~~~~~~~~~ 84 (85)
T PRK11200 57 ETVPQIFVDQKHIGGCTDFEAYVKENLG 84 (85)
T ss_pred CcCCEEEECCEEEcCHHHHHHHHHHhcc
Confidence 4689999999999999999999988765
No 115
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=73.66 E-value=5 Score=21.95 Aligned_cols=23 Identities=13% Similarity=0.167 Sum_probs=16.1
Q ss_pred ccceeeeeCCeEE--echhHHHHHH
Q 030858 3 HLYLVLGFNHVIL--SESRAICRYV 25 (170)
Q Consensus 3 ~~vP~L~~~~~~l--~eS~aI~~yL 25 (170)
..||++..+|..+ .+...|.++|
T Consensus 49 ~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 49 RGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred CcccEEEECCEEEeeCCHHHHHHHh
Confidence 5789999888776 5555555554
No 116
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=60.82 E-value=12 Score=20.14 Aligned_cols=22 Identities=5% Similarity=-0.117 Sum_probs=18.4
Q ss_pred ccceeeeeCCeEEechhHHHHH
Q 030858 3 HLYLVLGFNHVILSESRAICRY 24 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~y 24 (170)
.++|++..+|..+.++..|.+.
T Consensus 49 ~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 49 PTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred CCcCEEEECCEEEecHHHHHHh
Confidence 4789999999999999887653
No 117
>PRK10638 glutaredoxin 3; Provisional
Probab=54.56 E-value=19 Score=20.72 Aligned_cols=24 Identities=0% Similarity=-0.122 Sum_probs=19.6
Q ss_pred ccceeeeeCCeEEechhHHHHHHH
Q 030858 3 HLYLVLGFNHVILSESRAICRYVC 26 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~ 26 (170)
.++|++..+|..+.....+..+-.
T Consensus 51 ~~vP~i~~~g~~igG~~~~~~~~~ 74 (83)
T PRK10638 51 TTVPQIFIDAQHIGGCDDLYALDA 74 (83)
T ss_pred CCcCEEEECCEEEeCHHHHHHHHH
Confidence 469999999999999888776644
No 118
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=51.45 E-value=22 Score=19.66 Aligned_cols=22 Identities=5% Similarity=-0.056 Sum_probs=19.0
Q ss_pred cceeeeeCCeEEechhHHHHHH
Q 030858 4 LYLVLGFNHVILSESRAICRYV 25 (170)
Q Consensus 4 ~vP~L~~~~~~l~eS~aI~~yL 25 (170)
.+|++..+|..+.+...+.++-
T Consensus 51 ~vP~v~i~g~~igg~~~~~~~~ 72 (75)
T cd03418 51 TVPQIFIGDVHIGGCDDLYALE 72 (75)
T ss_pred ccCEEEECCEEEeChHHHHHHH
Confidence 7999999999999988887764
No 119
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=51.40 E-value=16 Score=22.60 Aligned_cols=27 Identities=4% Similarity=0.076 Sum_probs=22.5
Q ss_pred ceeee-eCCeEEechhHHHHHHHHhCCC
Q 030858 5 YLVLG-FNHVILSESRAICRYVCENYPE 31 (170)
Q Consensus 5 vP~L~-~~~~~l~eS~aI~~yL~~~~~~ 31 (170)
+|.+. .+|.+++.|..|+++.+..|..
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~~ 29 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHDN 29 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchHH
Confidence 46664 6899999999999999988775
No 120
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=47.90 E-value=27 Score=19.65 Aligned_cols=25 Identities=0% Similarity=-0.154 Sum_probs=20.8
Q ss_pred ccceeeeeCCeEEechhHHHHHHHH
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCE 27 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~ 27 (170)
-.+|++..+|..+.++..|.++..+
T Consensus 52 ~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 52 RTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred CCCCeEEECCEEEcCHHHHHHHHHc
Confidence 3689999999999999988887654
No 121
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=47.17 E-value=30 Score=19.51 Aligned_cols=25 Identities=4% Similarity=-0.091 Sum_probs=18.8
Q ss_pred ccceeeeeCCeEEechhHHHHHHHH
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCE 27 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~ 27 (170)
..+|.+..+|..+.++..+.+...+
T Consensus 53 ~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 53 RTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CCCCeEEECCEEEcCHHHHHHHHHc
Confidence 4688888888888888777766543
No 122
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=43.25 E-value=40 Score=16.55 Aligned_cols=24 Identities=4% Similarity=-0.090 Sum_probs=15.9
Q ss_pred ccceeeeeCCeEEechhHHHHHHH
Q 030858 3 HLYLVLGFNHVILSESRAICRYVC 26 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~ 26 (170)
|.+|....++..++....|.+|+.
T Consensus 25 g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 25 GELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred CCCCeEEeCCeEEEeHHHHHHHHh
Confidence 456666556666777777777765
No 123
>PF11732 Thoc2: Transcription- and export-related complex subunit; InterPro: IPR021726 The THO/TREX complex is the transcription- and export-related complex associated with spliceosomes that preferentially deal with spliced mRNAs as opposed to unspliced mRNAs. Thoc2 plays a role in RNA polymerase II (RNA pol II)-dependent transcription and is required for the stability of DNA repeats []. In humans, the TRE complex is comprised of the exon-junction-associated proteins Aly/REF and UAP56 together with the THO proteins THOC1 (hHpr1/p84), Thoc2 (hRlr1), THOC3 (hTex1), THOC5 (fSAP79), THOC6 (fSAP35), and THOC7 (fSAP24). Although much evidence indicates that the function of the TREX complex as an adaptor between the mRNA and components of the export machinery is conserved among eukaryotes, in Drosophila the majority of mRNAs can be exported from the nucleus independently of the THO complex []. This entry represents a conserved domain found towards the N terminus of these proteins.
Probab=38.83 E-value=53 Score=19.04 Aligned_cols=34 Identities=15% Similarity=0.291 Sum_probs=23.8
Q ss_pred hhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHh
Q 030858 118 DLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEIS 152 (170)
Q Consensus 118 Di~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~ 152 (170)
|+..|+++.++..... ....+..-++..|++++.
T Consensus 43 DvL~~~ll~~L~~~~r-~~~k~dg~~~s~Wlq~La 76 (77)
T PF11732_consen 43 DVLTFCLLERLSNPGR-SRLKDDGTNISQWLQSLA 76 (77)
T ss_pred HHHHHHHHHHHhcccc-hhcCcCCCCHHHHHHHHh
Confidence 9999999988863222 123345678899998864
No 124
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=33.71 E-value=60 Score=18.14 Aligned_cols=25 Identities=8% Similarity=-0.049 Sum_probs=19.3
Q ss_pred ccceeeeeCCeEEechhHHHHHHHH
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCE 27 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~ 27 (170)
..+|++..+|..+.+...+..+-.+
T Consensus 48 ~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 48 RTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CCcCEEEECCEEEcChHHHHHHHHc
Confidence 3689999999988888777665543
No 125
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=32.94 E-value=39 Score=18.11 Aligned_cols=16 Identities=19% Similarity=-0.054 Sum_probs=12.0
Q ss_pred ccceeeeeCCeEEech
Q 030858 3 HLYLVLGFNHVILSES 18 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS 18 (170)
+.+|++.++|..+.+.
T Consensus 49 ~~vP~i~~~~~~i~g~ 64 (73)
T cd02976 49 RSVPVVVIGDEHLSGF 64 (73)
T ss_pred cccCEEEECCEEEecC
Confidence 5799999888766543
No 126
>PF09098 Dehyd-heme_bind: Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding; InterPro: IPR015182 Quinohemoprotein amine dehydrogenases (QHNDH) 1.4.99 from EC) are enzymes produced in the periplasmic space of certain Gram-negative bacteria, such as Paracoccus denitrificans and Pseudomonas putida, in response to primary amines, including n-butylamine and benzylamine. QHNDH catalyses the oxidative deamination of a wide range of aliphatic and aromatic amines through formation of a Schiff-base intermediate involving one of the quinone O atoms []. Catalysis requires the presence of a novel redox cofactor, cysteine tryptophylquinone (CTQ). CTQ is derived from the post-translational modification of specific residues, which involves the oxidation of the indole ring of a tryptophan residue to form tryptophylquinone, followed by covalent cross-linking with a cysteine residue []. There is one CTQ per subunit in QHNDH. In addition to CTQ, two haem c cofactors are present in QHNDH that mediate the transfer of the substrate-derived electrons from CTQ to an external electron acceptor, cytochrome c-550 [, ]. QHNDH is a heterotrimer of alpha, beta and gamma subunits. The alpha and beta subunits contain signal peptides necessary for the translocation of QHNDH to the periplasm. The alpha subunit is composed of four domains - domain 1 forming a dihaem cytochrome, and domains 2-4 forming antiparallel beta-barrel structures; the beta subunit is a 7-bladed beta-propeller that provides part of the active site; and the small, catalytic gamma subunit contains the novel cross-linked CTQ cofactor, in addition to additional thioester cross-links between Cys and Asp/Glu residues that encage CTQ. The gamma subunit assumes a globular secondary structure with two short alpha-helices having many turns and bends []. This entry represents the dihaem cytochrome c domain of the QHNDH alpha subunit. The domain contain two cysteine residues that are involved in thioether linkages to haem []. ; PDB: 1PBY_A 1JJU_A 1JMZ_A 1JMX_A.
Probab=30.02 E-value=38 Score=22.75 Aligned_cols=14 Identities=29% Similarity=0.627 Sum_probs=11.8
Q ss_pred chhHHHHHHHHhCC
Q 030858 17 ESRAICRYVCENYP 30 (170)
Q Consensus 17 eS~aI~~yL~~~~~ 30 (170)
|-.+|++||.+.+|
T Consensus 55 er~avVkYLAd~~G 68 (167)
T PF09098_consen 55 ERRAVVKYLADTQG 68 (167)
T ss_dssp HHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHccC
Confidence 56899999999998
No 127
>PRK15371 effector protein YopJ; Provisional
Probab=29.11 E-value=2.4e+02 Score=20.97 Aligned_cols=43 Identities=14% Similarity=0.356 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHH
Q 030858 86 KQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLV 129 (170)
Q Consensus 86 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~ 129 (170)
+...+++..+++.+|..++++.|+ -+.++..|+-..+.|....
T Consensus 22 ~~~~~~L~~~i~~le~~~~~G~~~-~~~~~~~Di~~lp~lv~~~ 64 (287)
T PRK15371 22 EISNEELKNIITQLEDDIADGSWI-HKNYARTDLEVMPALVAQA 64 (287)
T ss_pred hhhHHHHHHHHHHHHHHHHcCCCC-CchhHHhhHHhhHHHHHHH
Confidence 356677999999999999988888 4458899999888886665
No 128
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=29.01 E-value=33 Score=22.26 Aligned_cols=48 Identities=17% Similarity=0.088 Sum_probs=27.3
Q ss_pred HhCCCCccccCCcchhhhchhhhHHHHHhhcCcCcccCCCchHHHHHHHHhc
Q 030858 102 RLGESRFLAGDEFSLADLSHLPNAHYLVNATDRGEILTSRDNVGRWWGEISN 153 (170)
Q Consensus 102 ~L~~~~~l~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 153 (170)
+|+.-.-++++.+..||+++..+ -+ ................|.+++..
T Consensus 97 qLASerilvs~~~~aaDa~ASgC--kv--l~~e~~~~~w~~~~~~~~~~V~~ 144 (146)
T PF04763_consen 97 QLASERILVSRECDAADAYASGC--KV--LQFEDEHNPWASEHAQFAREVRR 144 (146)
T ss_pred hhhhccceecccccHHHHHhcCc--eE--EEecCcCCHHHHHHHHHHHHHhh
Confidence 45555678899999999987665 11 11111111223456667776654
No 129
>PHA02776 E7 protein; Provisional
Probab=26.88 E-value=30 Score=21.21 Aligned_cols=13 Identities=23% Similarity=0.396 Sum_probs=11.4
Q ss_pred cccCCcchhhhch
Q 030858 109 LAGDEFSLADLSH 121 (170)
Q Consensus 109 l~G~~~t~aDi~~ 121 (170)
+.|.++|+-||.+
T Consensus 1 M~G~~pTl~DIvL 13 (101)
T PHA02776 1 MHGKHPTLKDIVL 13 (101)
T ss_pred CCCCCCcHhHeee
Confidence 4699999999987
No 130
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=26.79 E-value=82 Score=16.95 Aligned_cols=29 Identities=21% Similarity=0.386 Sum_probs=18.4
Q ss_pred HHHHHHHHHHhCCCCccccCCc-chhhhch
Q 030858 93 AKVLDVYEKRLGESRFLAGDEF-SLADLSH 121 (170)
Q Consensus 93 ~~~l~~le~~L~~~~~l~G~~~-t~aDi~~ 121 (170)
+...+.+.+.+.++.|-.|+++ |.++++-
T Consensus 3 ~~i~~~l~~~I~~g~~~~g~~lps~~~la~ 32 (64)
T PF00392_consen 3 EQIYDQLRQAILSGRLPPGDRLPSERELAE 32 (64)
T ss_dssp HHHHHHHHHHHHTTSS-TTSBE--HHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCEeCCHHHHHH
Confidence 3455666666667778888887 8777753
No 131
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=24.32 E-value=1e+02 Score=17.33 Aligned_cols=24 Identities=25% Similarity=0.040 Sum_probs=20.1
Q ss_pred ceeeeeCCeEEechhHHHHHHHHhC
Q 030858 5 YLVLGFNHVILSESRAICRYVCENY 29 (170)
Q Consensus 5 vP~L~~~~~~l~eS~aI~~yL~~~~ 29 (170)
=||+...| ..+|-.+|.+||.+..
T Consensus 16 dPVi~~~G-~tyer~~I~~~l~~~~ 39 (73)
T PF04564_consen 16 DPVILPSG-HTYERSAIERWLEQNG 39 (73)
T ss_dssp SEEEETTS-EEEEHHHHHHHHCTTS
T ss_pred CceeCCcC-CEEcHHHHHHHHHcCC
Confidence 48888777 8899999999999933
No 132
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=24.14 E-value=1.1e+02 Score=15.58 Aligned_cols=22 Identities=0% Similarity=0.208 Sum_probs=16.2
Q ss_pred chHHHHHHHHhcCccHHHHHHH
Q 030858 142 DNVGRWWGEISNRDSWKKVVDM 163 (170)
Q Consensus 142 p~l~~w~~~~~~~p~~~~~~~~ 163 (170)
..+.++++++.+.|.+++-+..
T Consensus 4 ~~l~~Fl~~~~~d~~l~~~l~~ 25 (49)
T PF07862_consen 4 ESLKAFLEKVKSDPELREQLKA 25 (49)
T ss_pred HHHHHHHHHHhcCHHHHHHHHh
Confidence 3577788888888888776654
No 133
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=23.95 E-value=1.4e+02 Score=22.93 Aligned_cols=100 Identities=13% Similarity=0.033 Sum_probs=54.2
Q ss_pred eCCeEEechhHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccCchh----HHHHHHHHhccccCCCCChHHH
Q 030858 10 FNHVILSESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPS----SALVFQLALAPRMNIKQDEGVI 85 (170)
Q Consensus 10 ~~~~~l~eS~aI~~yL~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 85 (170)
+.+..+.|+.+|..-|...-.. -.-+-+..++.++..|+......-.+.- -..+.+.++.. .+.+.++
T Consensus 103 ~~dQ~~VEaa~la~aL~~a~~~----lW~~L~~~~k~~l~~wL~~~~~~~~~~nNW~lF~v~v~~~L~~-~G~~~d~--- 174 (361)
T PF10022_consen 103 DYDQRLVEAASLALALLRAPEW----LWDPLDEEEKENLVDWLKQIRGIKPPDNNWLLFRVMVEAFLKK-VGEEYDE--- 174 (361)
T ss_pred cchhhHhHHHHHHHHHHHCHHH----HHhhCCHHHHHHHHHHHHhcCcCCCccchhHHHHHHHHHHHHH-cCCCCcH---
Confidence 3457788888888888765332 1334667788888888875443222111 11111112111 1333332
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCccccCCcchhhhch
Q 030858 86 KQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSH 121 (170)
Q Consensus 86 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~ 121 (170)
..+...++.+++.-.+.+|.....-.-.|...
T Consensus 175 ----~~i~~~l~~~e~~Y~GdGWY~DG~~~~~DYYn 206 (361)
T PF10022_consen 175 ----ERIDYDLERIEEWYLGDGWYSDGPEFQFDYYN 206 (361)
T ss_pred ----HHHHHHHHHHHHHhccCCccccCCccCCcchH
Confidence 56677888888865555555533334457655
No 134
>KOG0095 consensus GTPase Rab30, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.71 E-value=86 Score=20.89 Aligned_cols=34 Identities=26% Similarity=0.444 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhCCC--CccccCCcchhhhchhh
Q 030858 90 EKLAKVLDVYEKRLGES--RFLAGDEFSLADLSHLP 123 (170)
Q Consensus 90 ~~~~~~l~~le~~L~~~--~~l~G~~~t~aDi~~~~ 123 (170)
.-++++|..+++..+++ .-++|++...+|=.-.+
T Consensus 96 dclpewlreie~yan~kvlkilvgnk~d~~drrevp 131 (213)
T KOG0095|consen 96 DCLPEWLREIEQYANNKVLKILVGNKIDLADRREVP 131 (213)
T ss_pred hhhHHHHHHHHHHhhcceEEEeeccccchhhhhhhh
Confidence 34567788888887665 67889999999874333
No 135
>PF10990 DUF2809: Protein of unknown function (DUF2809); InterPro: IPR021257 Some members in this family of proteins are annotated as yjgA however currently no function for the protein is known.
Probab=22.83 E-value=48 Score=19.82 Aligned_cols=17 Identities=29% Similarity=0.464 Sum_probs=14.4
Q ss_pred CccccCCcchhhhchhh
Q 030858 107 RFLAGDEFSLADLSHLP 123 (170)
Q Consensus 107 ~~l~G~~~t~aDi~~~~ 123 (170)
..++|+.+++.|+..+.
T Consensus 71 ~lvLG~~F~w~Dll~Y~ 87 (91)
T PF10990_consen 71 RLVLGSTFDWWDLLAYA 87 (91)
T ss_pred HhhcCCCCCHHHHHHHH
Confidence 46789999999998765
No 136
>PF13227 DUF4035: Protein of unknown function (DUF4035)
Probab=22.44 E-value=47 Score=17.71 Aligned_cols=12 Identities=25% Similarity=0.443 Sum_probs=9.3
Q ss_pred cCCcchhhhchh
Q 030858 111 GDEFSLADLSHL 122 (170)
Q Consensus 111 G~~~t~aDi~~~ 122 (170)
|.+++++|++.+
T Consensus 30 g~k~~l~D~mp~ 41 (53)
T PF13227_consen 30 GKKPKLSDFMPF 41 (53)
T ss_pred CCCCcHHHHHhh
Confidence 556999998874
No 137
>PF03421 YopJ: YopJ Serine/Threonine acetyltransferase; InterPro: IPR005083 The infection of mammalian host cells by Yersinia sp. causes a rapid induction of the mitogen-activated protein kinase (MAPK; including the ERK, JNK and p38 pathways) and nuclear factor kappaB (NF-kappaB) signalling pathways that would typically result in cytokine production and initiation of the innate immune response. However, these pathways are rapidly inhibited promoting apoptosis. YopJ has been shown to block phosphorylation of active site residues []. It has also been shown that YopJ acetyltransferase is activated by eukaryotic host cell inositol hexakisphosphate []. Serine and threonine acetylation is yet another complication to the control of signalling pathways and may be a may be a widespread mode of biochemical regulation of endogenous processes in eukaryotic cells. It has been shown that YopJ is a serine/threonine acetyltransferase []. It acetylates the serine and threonine residues in the phosphorylation sites of MAPK kinases and nuclear factor kappaB, preventing their activation by phosphorylation and the inhibition of these signalling pathways []. This entry contains YopJ and related proteins.
Probab=21.90 E-value=2.7e+02 Score=18.97 Aligned_cols=38 Identities=13% Similarity=0.263 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhCCCCccccCCcchhhhchhhhHHHHH
Q 030858 91 KLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLV 129 (170)
Q Consensus 91 ~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~l~~~~ 129 (170)
.+..+.+.+++.+.++.|+ .+.++-.|+...+.|....
T Consensus 3 ~L~~y~~~~~~~~~~g~~~-~~~~~~~D~~~lp~lv~~~ 40 (177)
T PF03421_consen 3 SLKEYIERLEDDIKNGSWP-NESYAELDIKMLPALVAAE 40 (177)
T ss_pred HHHHHHHHHHHHHHhCCCC-CcchhhhhHHHHHHHHHHH
Confidence 4677888889999888888 6778999999888886665
No 138
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=21.67 E-value=62 Score=21.16 Aligned_cols=19 Identities=16% Similarity=0.553 Sum_probs=15.9
Q ss_pred CchHHHHHHHHhcCccHHH
Q 030858 141 RDNVGRWWGEISNRDSWKK 159 (170)
Q Consensus 141 ~p~l~~w~~~~~~~p~~~~ 159 (170)
.-.|.+|++|+.++|....
T Consensus 111 r~~LqrfL~RV~~hP~L~~ 129 (140)
T cd06891 111 KANLQRWFNRVCSDPILIR 129 (140)
T ss_pred HHHHHHHHHHHhCChhhcc
Confidence 5689999999999997654
No 139
>PF11216 DUF3012: Protein of unknown function (DUF3012); InterPro: IPR021379 This family of proteins with unknown function is restricted to Gammaproteobacteria.
Probab=21.28 E-value=83 Score=14.81 Aligned_cols=12 Identities=8% Similarity=0.537 Sum_probs=9.8
Q ss_pred HHHHHHHhcCcc
Q 030858 145 GRWWGEISNRDS 156 (170)
Q Consensus 145 ~~w~~~~~~~p~ 156 (170)
.+|++.|...|.
T Consensus 4 e~WC~~m~~kpK 15 (32)
T PF11216_consen 4 EAWCEDMKEKPK 15 (32)
T ss_pred HHHHHHHhhCCc
Confidence 579999998775
No 140
>COG3646 Uncharacterized phage-encoded protein [Function unknown]
Probab=20.88 E-value=62 Score=21.84 Aligned_cols=24 Identities=25% Similarity=0.376 Sum_probs=20.4
Q ss_pred eeeCCeEEechhHHHHHHHHhCCC
Q 030858 8 LGFNHVILSESRAICRYVCENYPE 31 (170)
Q Consensus 8 L~~~~~~l~eS~aI~~yL~~~~~~ 31 (170)
+..++.+++.|.-|+++.+.+|++
T Consensus 7 i~~N~~i~t~S~~IAe~~gkrH~~ 30 (167)
T COG3646 7 IDSNKLIVTNSREIAEMVGKRHDN 30 (167)
T ss_pred hhcCCceeecHHHHHHHHhhhhhh
Confidence 445677999999999999999886
No 141
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=20.50 E-value=1.5e+02 Score=17.17 Aligned_cols=46 Identities=22% Similarity=0.181 Sum_probs=29.9
Q ss_pred hhHHHHHhhcCcC---cccCCCchHHHHHHHHhcCccHHHHHHHHhhcC
Q 030858 123 PNAHYLVNATDRG---EILTSRDNVGRWWGEISNRDSWKKVVDMQKQQH 168 (170)
Q Consensus 123 ~~l~~~~~~~~~~---~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~ 168 (170)
+++..+....... .+....+||.+++.-=.++|.|.++.+..-.+.
T Consensus 17 ~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGI 65 (85)
T COG4545 17 PAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGYIGI 65 (85)
T ss_pred HHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCcccc
Confidence 4444554443332 244567899999988888999988876655444
No 142
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=20.36 E-value=71 Score=17.43 Aligned_cols=18 Identities=6% Similarity=-0.053 Sum_probs=12.3
Q ss_pred Cccceeee-eCCeEEechh
Q 030858 2 IHLYLVLG-FNHVILSESR 19 (170)
Q Consensus 2 ~~~vP~L~-~~~~~l~eS~ 19 (170)
.+.||++. ++|..+.++.
T Consensus 49 ~~~vP~i~~~~g~~l~~~~ 67 (77)
T TIGR02200 49 NMTVPTVKFADGSFLTNPS 67 (77)
T ss_pred CceeCEEEECCCeEecCCC
Confidence 35789996 4667776544
No 143
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=20.33 E-value=1.6e+02 Score=17.13 Aligned_cols=22 Identities=9% Similarity=0.037 Sum_probs=17.1
Q ss_pred cceeeeeCCeEEechhHHHHHH
Q 030858 4 LYLVLGFNHVILSESRAICRYV 25 (170)
Q Consensus 4 ~vP~L~~~~~~l~eS~aI~~yL 25 (170)
++|.+..+|..|.+...+....
T Consensus 63 tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 63 TFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred CCCEEEECCEEEeCHHHHHHHH
Confidence 6899988888888877776643
No 144
>PF12728 HTH_17: Helix-turn-helix domain
Probab=20.15 E-value=1.4e+02 Score=15.02 Aligned_cols=25 Identities=4% Similarity=-0.080 Sum_probs=15.1
Q ss_pred ccceeeeeCCeEEechhHHHHHHHH
Q 030858 3 HLYLVLGFNHVILSESRAICRYVCE 27 (170)
Q Consensus 3 ~~vP~L~~~~~~l~eS~aI~~yL~~ 27 (170)
+.+|....++...+.-..|.+|+.+
T Consensus 25 g~i~~~~~g~~~~~~~~~l~~~~~~ 49 (51)
T PF12728_consen 25 GKIPPFKIGRKWRIPKSDLDRWLER 49 (51)
T ss_pred CCCCeEEeCCEEEEeHHHHHHHHHh
Confidence 3455555555566666666666654
Done!