BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030863
(170 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6AZD4|IMP2L_DANRE Mitochondrial inner membrane protease subunit 2 OS=Danio rerio
GN=immp2l PE=2 SV=1
Length = 183
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 93/158 (58%), Gaps = 6/158 (3%)
Query: 3 AHNFLWSLTKNCFTFGLIGLTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLME 62
+ + F + +TV DR A + V G+SM P+ NP +S S D VL+
Sbjct: 7 GRRYFKAFVSGFFVAVPVTVTVLDRLAYVARVEGASMQPSLNPDGES-----SPDVVLLN 61
Query: 63 KFCLQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGT-PMTNDVVKVPNGHCWVEG 121
++ ++ Y GD++ SP N ++K +KR+IG+ GD+I T N V+VP+GH W+EG
Sbjct: 62 RWSVRNYHVQRGDIVSVLSPKNPQQKIIKRVIGIEGDFIKTLGYKNRYVRVPDGHLWIEG 121
Query: 122 DNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQRVRHVE 159
D+ S DS +FGP+ LGLV GR +HI+WPP R + +E
Sbjct: 122 DHHGHSFDSNAFGPVSLGLVHGRASHIIWPPSRWQRIE 159
>sp|Q8BPT6|IMP2L_MOUSE Mitochondrial inner membrane protease subunit 2 OS=Mus musculus
GN=Immp2l PE=2 SV=1
Length = 175
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 9 SLTKNCFTFGLIGLTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQK 68
+ K F + +T DR A + V GSSM P+ NP GS S D VL+ + ++
Sbjct: 14 AFCKGFFVAVPVAVTFLDRVACVARVEGSSMQPSLNPG-----GSQSSDVVLLNHWKVRN 68
Query: 69 YKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGT-PMTNDVVKVPNGHCWVEGDNPSSS 127
++ GD++ SP N ++K +KR+I L GD + T N +VKVP GH WVEGD+ S
Sbjct: 69 FEVQRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRLVKVPRGHMWVEGDHHGHS 128
Query: 128 LDSRSFGPIPLGLVKGRVTHILWPPQRVRHVE 159
DS SFGP+ LGL+ THILWPP+R + +E
Sbjct: 129 FDSNSFGPVSLGLLHAHATHILWPPERWQRLE 160
>sp|Q96T52|IMP2L_HUMAN Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens
GN=IMMP2L PE=2 SV=1
Length = 175
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 90/155 (58%), Gaps = 6/155 (3%)
Query: 6 FLWSLTKNCFTFGLIGLTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFC 65
++ + K F + +T DR A + V G+SM P+ NP GS S D VL+ +
Sbjct: 11 YIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPG-----GSQSSDVVLLNHWK 65
Query: 66 LQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGT-PMTNDVVKVPNGHCWVEGDNP 124
++ ++ GD++ SP N ++K +KR+I L GD + T N VKVP GH WVEGD+
Sbjct: 66 VRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWVEGDHH 125
Query: 125 SSSLDSRSFGPIPLGLVKGRVTHILWPPQRVRHVE 159
S DS SFGP+ LGL+ THILWPP+R + +E
Sbjct: 126 GHSFDSNSFGPVSLGLLHAHATHILWPPERWQKLE 160
>sp|Q2KI92|IMP2L_BOVIN Mitochondrial inner membrane protease subunit 2 OS=Bos taurus
GN=IMMP2L PE=2 SV=1
Length = 177
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 89/155 (57%), Gaps = 6/155 (3%)
Query: 6 FLWSLTKNCFTFGLIGLTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFC 65
+ + K F + +T DR A + V G+SM P+ NP GS S D VL+ +
Sbjct: 11 YFKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPG-----GSQSSDVVLLNHWK 65
Query: 66 LQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGT-PMTNDVVKVPNGHCWVEGDNP 124
++ ++ GD++ SP N ++K +KR+I L GD + T N VKVP GH WVEGD+
Sbjct: 66 VRNFEVQRGDIVSLVSPKNPEQKIIKRVIALEGDIVKTMGHKNRYVKVPRGHIWVEGDHH 125
Query: 125 SSSLDSRSFGPIPLGLVKGRVTHILWPPQRVRHVE 159
S DS SFGP+ LGL+ THILWPP+R + +E
Sbjct: 126 GHSFDSNSFGPVSLGLLHAHATHILWPPKRWQKLE 160
>sp|Q5PQ63|IMP2L_XENLA Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis
GN=immp2l PE=2 SV=1
Length = 170
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Query: 1 MAAH--NFLWSLTKNCFTFGLIGLTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDH 58
MA H ++ + F + +T DR A I V G SM P+ NP D
Sbjct: 1 MAQHGRRYVRAFISGFFVAVPVTVTFLDRVACIARVEGVSMQPSLNPDARG-----ESDI 55
Query: 59 VLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGT-PMTNDVVKVPNGHC 117
VL+ ++ + Y GD++ SP N ++K +KR+I L GD + T N VKVP GH
Sbjct: 56 VLLNRWRARNYDVQRGDIVSLVSPKNPEQKIIKRVIALEGDIVKTLGHKNRYVKVPRGHV 115
Query: 118 WVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQR 154
WVEGD+ S DS +FGP+ LGL+ THILWPP R
Sbjct: 116 WVEGDHHGHSFDSNAFGPVSLGLLHSHATHILWPPNR 152
>sp|P46972|IMP2_YEAST Mitochondrial inner membrane protease subunit 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMP2 PE=1
SV=1
Length = 177
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 22 LTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQK-YKFSHGDVIVFC 80
LT+++ I V+G+SM PT NP T++ L+ D VL+ KF ++ S D+I+F
Sbjct: 25 LTINNNVVHIAQVKGTSMQPTLNPQTET----LATDWVLLWKFGVKNPSNLSRDDIILFK 80
Query: 81 SPSNHKEKHVKRIIGLPGDWIGT--PMTNDVVKVPNGHCWVEGDNPSSSLDSRSFGPIPL 138
+P+N ++ + KR+ GLP D I T P V +P GH WVEGDN S+DS +FGPI
Sbjct: 81 APTNPRKVYCKRVKGLPFDTIDTKFPYPKPQVNLPRGHIWVEGDNYFHSIDSNTFGPISS 140
Query: 139 GLVKGRVTHILWPPQR 154
GLV G+ I+WPP R
Sbjct: 141 GLVIGKAITIVWPPSR 156
>sp|Q9UST2|IMP2L_SCHPO Mitochondrial inner membrane protease subunit 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC336.13c PE=3 SV=1
Length = 180
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 12 KNCFTFGLIGLT--------VSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEK 63
K+ F L+G+T V S+ + G SM P FNP T+ L D VL+ K
Sbjct: 12 KSVFFKNLVGITLWVPVLMFVEQHVVSVGTIEGRSMKPAFNPETNM----LQRDRVLLWK 67
Query: 64 FCLQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGT--PMTNDVVKVPNGHCWVEG 121
+ + YK GDV++ SP N +E VKR++G+ D + T P +V VP GH WVEG
Sbjct: 68 WN-KDYK--RGDVVILRSPENPEELLVKRVLGVEYDIMKTRPPKKLSLVPVPEGHVWVEG 124
Query: 122 DNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQRVRHVERKNHQK 165
D S+DS FGP+ GL+ +V IL+P R ++ + +K
Sbjct: 125 DEQFHSIDSNKFGPVSTGLITAKVIAILFPFSRAGRIDHEGFRK 168
>sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1 OS=Mus musculus
GN=Immp1l PE=2 SV=1
Length = 166
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 8 WSLTKNCFTFGLIGLTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQ 67
+ L +G I + +V G SM PT + D V E
Sbjct: 10 FRLAGYTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQ----------NSDIVFAENLSRH 59
Query: 68 KYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVVK----VPNGHCWVEGDN 123
Y GD+++ SPS+ K KR+IGL GD I + +DV K VP GH W+EGDN
Sbjct: 60 FYGIQRGDIVIAKSPSDPKSNICKRVIGLEGDKILSTSPSDVFKSRSYVPTGHVWLEGDN 119
Query: 124 PSSSLDSRSFGPIPLGLVKGRVTHILWP 151
+S DSR +GPIP GL++GR+ +WP
Sbjct: 120 LQNSTDSRYYGPIPYGLIRGRIFFKIWP 147
>sp|Q96LU5|IMP1L_HUMAN Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens
GN=IMMP1L PE=2 SV=1
Length = 166
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 8 WSLTKNCFTFGLIGLTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQ 67
+ L +G I + +V G SM PT + D V E
Sbjct: 10 FRLVGYTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQ----------NSDIVFAENLSRH 59
Query: 68 KYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVVK----VPNGHCWVEGDN 123
Y GD+++ SPS+ K KR+IGL GD I T +D K VP GH W+EGDN
Sbjct: 60 FYGIQRGDIVIAKSPSDPKSNICKRVIGLEGDKILTTSPSDFFKSHSYVPMGHVWLEGDN 119
Query: 124 PSSSLDSRSFGPIPLGLVKGRVTHILWP 151
+S DSR +GPIP GL++GR+ +WP
Sbjct: 120 LQNSTDSRCYGPIPYGLIRGRIFFKIWP 147
>sp|O74800|IMP1_SCHPO Mitochondrial inner membrane protease subunit 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=imp1 PE=3 SV=1
Length = 157
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 10/118 (8%)
Query: 36 GSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRIIG 95
G SM PT N + + L H + C S GDV+V PS+ K+ KRIIG
Sbjct: 33 GPSMMPTLNSGGEFVL--LDKLHGRFARSC------SVGDVVVSAKPSDSKQHVCKRIIG 84
Query: 96 LPGD--WIGTPMTNDVVKVPNGHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWP 151
+PGD ++ +N + +P GH W+ GDN + SLDSR++GP+P+GL+K +V +WP
Sbjct: 85 MPGDTIYVDPTSSNKKITIPLGHVWLAGDNIAHSLDSRNYGPVPMGLIKAKVIARVWP 142
>sp|Q28I39|IMP1L_XENTR Mitochondrial inner membrane protease subunit 1 OS=Xenopus
tropicalis GN=immp1l PE=2 SV=1
Length = 167
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 23/149 (15%)
Query: 16 TFGLIGLTVS---------DRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCL 66
T GL+G T+ + +V G SM PT + D +L +
Sbjct: 9 TLGLLGYTIQYGCIAHCAFEYIGEVVICSGPSMEPTIR----------NYDVLLCDNLSR 58
Query: 67 QKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVVK----VPNGHCWVEGD 122
+ GD+IV SP KR+IGL GD + + ++K VP GH W+EGD
Sbjct: 59 HFFSIHKGDIIVAKSPDKPSVNICKRVIGLEGDKVCMSSPSALLKRHTYVPKGHVWLEGD 118
Query: 123 NPSSSLDSRSFGPIPLGLVKGRVTHILWP 151
N +S DSRS+GP+P L++GR+ +WP
Sbjct: 119 NLDNSTDSRSYGPVPYALIRGRICLRVWP 147
>sp|P28627|IMP1_YEAST Mitochondrial inner membrane protease subunit 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMP1 PE=1
SV=3
Length = 190
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Query: 7 LWSLTKNCFTFGLIGLTVSDRYA-SIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFC 65
+WS T + L L + YA RG SM PT + T +D+V + K
Sbjct: 8 IWSKTFSYAIRSLCFLHIIHMYAYEFTETRGESMLPTLSAT---------NDYVHVLKNF 58
Query: 66 LQKYKFSHGDVIVFCSPSNHKEKHVKRIIGLPGD-----------WIGTPMTND-----V 109
GD IV P++ + KR+ G+PGD ++G + ++
Sbjct: 59 QNGRGIKMGDCIVALKPTDPNHRICKRVTGMPGDLVLVDPSTIVNYVGDVLVDEERFGTY 118
Query: 110 VKVPNGHCWVEGDNPSSSLDSRSFGPIPLGLVKGRV 145
+KVP GH WV GDN S SLDSR++ +P+GL+ G++
Sbjct: 119 IKVPEGHVWVTGDNLSHSLDSRTYNALPMGLIMGKI 154
>sp|O04348|TPP1_ARATH Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis
thaliana GN=TPP1 PE=2 SV=2
Length = 340
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 37/182 (20%)
Query: 5 NFLWSLTKNCFTFGLIGLTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKF 64
N L S+ +TVS + S + S S + PT D D V+ EK
Sbjct: 147 NKLLSVCSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLDK------GDRVMAEKV 200
Query: 65 CLQKYKFSHGDVIVFCSP----------SNHKEKHVKRIIGLPGDWI----GTPMTNDVV 110
K D+++F +P + + +KRI+ GDW+ G ND+V
Sbjct: 201 SYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIV 260
Query: 111 K-----------------VPNGHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQ 153
+ VP G+ +V GDN + S DS ++GP+P+ + GR WPP
Sbjct: 261 QEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPS 320
Query: 154 RV 155
+V
Sbjct: 321 KV 322
>sp|Q9M9Z2|TPP2_ARATH Probable thylakoidal processing peptidase 2, chloroplastic
OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1
Length = 367
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 40/186 (21%)
Query: 11 TKNCFTFGLIGLTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYK 70
K FT + L A + +SM PT + D V+ EK K
Sbjct: 187 AKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLD----------VGDRVIAEKVSYFFRK 236
Query: 71 FSHGDVIVFCSPS-------NHKEKHVKRIIGLPGDWI----GTPMTNDVVK-------- 111
D+++F +P + + +KRI+ GDW+ G + ND V+
Sbjct: 237 PEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEP 296
Query: 112 ---------VPNGHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQRVRHV--ER 160
VP G+ +V GDN + S DS ++GP+P+ + GR WPP +V +
Sbjct: 297 IDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPSKVSDIIHHE 356
Query: 161 KNHQKR 166
+ QKR
Sbjct: 357 QVSQKR 362
>sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1
PE=2 SV=2
Length = 291
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 71/170 (41%), Gaps = 40/170 (23%)
Query: 16 TFGLIGLTVSDRYASIVP--VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSH 73
F I ++++ RY P + SM PTF+ D ++ EK K
Sbjct: 118 VFVAIAVSLAFRYFIAEPRYIPSLSMYPTFD----------VGDRLVAEKVSYYFRKPCA 167
Query: 74 GDVIVFCSPSNHKEK-------HVKRIIGLPGDWI----GTPMTNDV------------- 109
D+++F SP +E +KRI+ GD + G M N V
Sbjct: 168 NDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEPPGY 227
Query: 110 ----VKVPNGHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQRV 155
++VP +V GDN ++S DS +GP+PL + GR WPP RV
Sbjct: 228 EMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPNRV 277
>sp|P73157|LEP2_SYNY3 Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB2 PE=3 SV=1
Length = 218
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 70/178 (39%), Gaps = 36/178 (20%)
Query: 4 HNFLWSLTKNCFTFGLIGLTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEK 63
N L K T ++ + + A + SSM PT +D +++EK
Sbjct: 18 ENTWLELGKTMVTAVILAIGIRTFVAEARYIPSSSMEPTLQ----------INDRLIIEK 67
Query: 64 FCLQKYKFSHGDVIVF-----CSPSNHKEKHVKRIIGLPGD------------------- 99
+ G+++VF N + +KRIIGLPGD
Sbjct: 68 ISYRLRDPERGEIVVFNPTDALKAKNFHDAFIKRIIGLPGDEVRVSQGNVYVNGKMLDEN 127
Query: 100 WIGTPMTNDV--VKVPNGHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQRV 155
+I P + VKVP+ V GDN ++S DS +G +P + GR WP RV
Sbjct: 128 YIAAPPAYEYGPVKVPDDQYLVLGDNRNNSYDSHYWGFVPREKLLGRAFVRFWPVPRV 185
>sp|P41027|LEP_BACCL Signal peptidase I OS=Bacillus caldolyticus GN=lepB PE=3 SV=1
Length = 182
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 62/155 (40%), Gaps = 51/155 (32%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
V G SM PT + LS D + +F D+IVF +N KE +VKR+
Sbjct: 34 VEGKSMMPTLESGNLLIVNKLSYDIGPIRRF----------DIIVF--HANKKEDYVKRV 81
Query: 94 IGLPGDWIGTPMTNDVV-------------------------------------KVPNGH 116
IGLPGD I ND++ +VP G
Sbjct: 82 IGLPGDRIA--YKNDILYVNGKKVDEPYLRPYKQKLLDGRLTGDFTLEEVTGKTRVPPGC 139
Query: 117 CWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWP 151
+V GDN SS DSR FG + + + G+V WP
Sbjct: 140 IFVLGDNRLSSWDSRHFGFVKINQIVGKVDFRYWP 174
>sp|Q57350|LEPQ_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=3
SV=1
Length = 185
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 63/160 (39%), Gaps = 47/160 (29%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
V+G SM PT + + + + KF F GD++V + K +VKR+
Sbjct: 39 VQGESMKPTL----------FNSERLFVNKFVKYTGDFKRGDIVV-LNGEEKKTHYVKRL 87
Query: 94 IGLPGDWIGTPMTNDV---------------------------------VKVPNGHCWVE 120
IGLPGD I M ND +KVP +V
Sbjct: 88 IGLPGDTI--EMKNDNLFVNGKRFNEEYLKENKKDAHDSDLNLTGDFGPIKVPKDKYFVM 145
Query: 121 GDNPSSSLDSRS-FGPIPLGLVKGRVTHILWPPQRVRHVE 159
GDN +S+DSR+ G + G + +P R+RH +
Sbjct: 146 GDNRQNSMDSRNGLGLFNKKDIVGVEELVFFPLDRIRHAK 185
>sp|Q51876|LEP_PHOLA Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1
Length = 203
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 29/138 (21%)
Query: 47 TDSFMGSLS-DDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKH-------VKRIIGLPG 98
++S + +L +D +++EK GD+IVF K+++ +KR+IGLPG
Sbjct: 57 SESMLPTLEVNDRLIVEKISYHFNPPRRGDIIVFHPTEALKQQNPSLNEAFIKRVIGLPG 116
Query: 99 DWI----------GTPMTNDVVKVPNGHCW-----------VEGDNPSSSLDSRSFGPIP 137
+ + G P+ + ++ P + W V GDN ++S DS +G +P
Sbjct: 117 ETVQVTGGRVLINGQPLEENYIQSPPDYQWGPEKVPADSFLVLGDNRNNSYDSHFWGYVP 176
Query: 138 LGLVKGRVTHILWPPQRV 155
+ GR WP R+
Sbjct: 177 RQNIIGRAVVRFWPVNRL 194
>sp|P42668|LEP_BACLI Signal peptidase I OS=Bacillus licheniformis GN=lepB PE=3 SV=1
Length = 186
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 43/158 (27%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
V G+SM PT + + + + K +F GD+++ + +VKR+
Sbjct: 40 VEGTSMDPTLH----------DGERLFVYKTVRYVGEFKRGDIVIIDGDEKNVH-YVKRL 88
Query: 94 IGLPGD-----------------------------WIGTPMTNDV--VKVPNGHCWVEGD 122
IGLPGD +G +T D VKVP G +V GD
Sbjct: 89 IGLPGDTVQMKDDTLYINGKKVSEPYLSENRKEAEAVGVKLTGDFGPVKVPEGKYFVMGD 148
Query: 123 NPSSSLDSRS-FGPIPLGLVKGRVTHILWPPQRVRHVE 159
N S+DSR+ G I V G + +P +R +
Sbjct: 149 NRQRSMDSRNGLGLIDKKRVAGTSQFVFFPFNEIRKTD 186
>sp|P42959|LEPU_BACSU Signal peptidase I U OS=Bacillus subtilis (strain 168) GN=sipU PE=1
SV=1
Length = 187
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 41/129 (31%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
+ GSSM+PT + + +L++K F GD+IV + + VKR+
Sbjct: 42 IEGSSMAPTLKDS----------ERILVDKAVKWTGGFHRGDIIVIHDKKSGRS-FVKRL 90
Query: 94 IGLPGDWI-----------------------------GTPMTNDV-VKVPNGHCWVEGDN 123
IGLPGD I G +T D V+VP+G +V GDN
Sbjct: 91 IGLPGDSIKMKNDQLYINDKKVEEPYLKEYKQEVKESGVTLTGDFEVEVPSGKYFVMGDN 150
Query: 124 PSSSLDSRS 132
+SLDSR+
Sbjct: 151 RLNSLDSRN 159
>sp|O07560|LEPV_BACSU Signal peptidase I V OS=Bacillus subtilis (strain 168) GN=sipV PE=2
SV=1
Length = 168
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 56/138 (40%), Gaps = 47/138 (34%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
V G SM+PTF + + S + +F D+++F P +HK +KR+
Sbjct: 30 VEGVSMNPTFQEGNELLVNKFSHRFKTIHRF----------DIVLFKGP-DHKV-LIKRV 77
Query: 94 IGLPGDWI---------------------------GTPMTND--------VVKVPNGHCW 118
IGLPG+ I G+ +T D KVP G +
Sbjct: 78 IGLPGETIKYKDDQLYVNGKQVAEPFLKHLKSVSAGSHVTGDFSLKDVTGTSKVPKGKYF 137
Query: 119 VEGDNPSSSLDSRSFGPI 136
V GDN S DSR FGPI
Sbjct: 138 VVGDNRIYSFDSRHFGPI 155
>sp|P0A069|LEP_STAAW Signal peptidase IB OS=Staphylococcus aureus (strain MW2) GN=spsB
PE=3 SV=1
Length = 191
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 60/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V + + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIIGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------------------------GTPMTNDVVK-------VPN 114
IG+PGD + GT D+ +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQRVRH 157
G V GDN S DSR+FG I + G+V+ WP +H
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKH 182
>sp|P0A070|LEP_STAAU Signal peptidase IB OS=Staphylococcus aureus GN=spsB PE=3 SV=1
Length = 191
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 60/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V + + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIIGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------------------------GTPMTNDVVK-------VPN 114
IG+PGD + GT D+ +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQRVRH 157
G V GDN S DSR+FG I + G+V+ WP +H
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKH 182
>sp|Q6GAW1|LEP_STAAS Signal peptidase IB OS=Staphylococcus aureus (strain MSSA476)
GN=spsB PE=3 SV=1
Length = 191
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 60/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V + + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIIGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------------------------GTPMTNDVVK-------VPN 114
IG+PGD + GT D+ +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQRVRH 157
G V GDN S DSR+FG I + G+V+ WP +H
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKH 182
>sp|P0A068|LEP_STAAN Signal peptidase IB OS=Staphylococcus aureus (strain N315) GN=spsB
PE=1 SV=1
Length = 191
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 60/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V + + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIIGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------------------------GTPMTNDVVK-------VPN 114
IG+PGD + GT D+ +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQRVRH 157
G V GDN S DSR+FG I + G+V+ WP +H
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKH 182
>sp|P0A067|LEP_STAAM Signal peptidase IB OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=spsB PE=3 SV=1
Length = 191
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 60/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V + + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIIGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------------------------GTPMTNDVVK-------VPN 114
IG+PGD + GT D+ +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQRVRH 157
G V GDN S DSR+FG I + G+V+ WP +H
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKH 182
>sp|Q5HHB9|LEP_STAAC Signal peptidase IB OS=Staphylococcus aureus (strain COL) GN=spsB
PE=3 SV=2
Length = 191
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 60/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V + + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIVGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------------------------GTPMTNDVVK-------VPN 114
IG+PGD + GT D+ +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQRVRH 157
G V GDN S DSR+FG I + G+V+ WP +H
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKH 182
>sp|P37943|LEPP_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=1
SV=1
Length = 186
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 62/161 (38%), Gaps = 49/161 (30%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEK---HV 90
V G SM PT + + + + K F GD+I+ N KEK +V
Sbjct: 40 VEGKSMDPTL----------VDSERLFVNKTVKYTGNFKRGDIIIL----NGKEKSTHYV 85
Query: 91 KRIIGLPGDW-----------------------------IGTPMTNDV--VKVPNGHCWV 119
KR+IGLPGD +G +T D +KVP +V
Sbjct: 86 KRLIGLPGDTVEMKNDHLFINGNEVKEPYLSYNKENAKKVGINLTGDFGPIKVPKDKYFV 145
Query: 120 EGDNPSSSLDSRS-FGPIPLGLVKGRVTHILWPPQRVRHVE 159
GDN S+DSR+ G ++G + +P +R +
Sbjct: 146 MGDNRQESMDSRNGLGLFTKDDIQGTEEFVFFPFSNMRKAK 186
>sp|P41026|LEP1_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipA PE=3 SV=1
Length = 185
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 45/158 (28%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
V G SM PT + F+ + K+ F G ++V + H +VKRI
Sbjct: 41 VDGESMEPTLHDRERIFVN-------MTVKYISD---FKRGQIVVLNGENEH---YVKRI 87
Query: 94 IGLPGDWI-----------------------------GTPMTNDV--VKVPNGHCWVEGD 122
IGLPGD + G +T+D VKVP+ +V GD
Sbjct: 88 IGLPGDTVQMKNDQLYINGKKVSEPYLAANKKKAKQDGYTLTDDFGPVKVPDDKYFVMGD 147
Query: 123 NPSSSLDSRS-FGPIPLGLVKGRVTHILWPPQRVRHVE 159
N +S+DSR+ G + G + +P +R +
Sbjct: 148 NRRNSMDSRNGLGLFTKKQIAGTSKFVFFPFNEIRKTK 185
>sp|P72660|LEP1_SYNY3 Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB1 PE=3 SV=1
Length = 196
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 29/137 (21%)
Query: 47 TDSFMGSLSD-DHVLMEKFCLQKYKFSHGDVIVFCSPS-------NHKEKHVKRIIGLPG 98
+DS + +L D +++EK + GD+IVF P + + +KR+I LPG
Sbjct: 42 SDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQAFIKRVIALPG 101
Query: 99 DWI----------GTPMTND-----------VVKVPNGHCWVEGDNPSSSLDSRSFGPIP 137
+ G P+ + V+VP+G +V GDN ++S DS +G +P
Sbjct: 102 QTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVMGDNRNNSNDSHVWGFLP 161
Query: 138 LGLVKGRVTHILWPPQR 154
+ G +P R
Sbjct: 162 QQNIIGHALFRFFPASR 178
>sp|Q6GIC3|LEP_STAAR Signal peptidase IB OS=Staphylococcus aureus (strain MRSA252)
GN=spsB PE=3 SV=1
Length = 191
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 60/163 (36%), Gaps = 51/163 (31%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
++G SM PT + V + + G+V+VF + N + +VKR+
Sbjct: 32 IKGESMDPTLK----------DGERVAVNIIGYKTGGLEKGNVVVFHA--NKNDDYVKRV 79
Query: 94 IGLPGDWI--------------------------------GTPMTNDVVK-------VPN 114
IG+PGD + GT D+ +P
Sbjct: 80 IGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPK 139
Query: 115 GHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHILWPPQRVRH 157
G V GDN S DSR+FG I + G+V+ WP ++
Sbjct: 140 GKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKY 182
>sp|P28628|LEPS_BACSU Signal peptidase I S OS=Bacillus subtilis (strain 168) GN=sipS PE=1
SV=1
Length = 184
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 46/156 (29%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
V G SM PT + F+ + K+ + F GD++V H +VKRI
Sbjct: 39 VDGDSMYPTLHNRERVFVN-------MTVKYIGE---FDRGDIVVLNGDDVH---YVKRI 85
Query: 94 IGLPGDWIGTP------------------------------MTNDV--VKVPNGHCWVEG 121
IGLPGD + +T+D VKVP+ +V G
Sbjct: 86 IGLPGDTVEMKNDQLYINGKKVDEPYLAANKKRAKQDGFDHLTDDFGPVKVPDNKYFVMG 145
Query: 122 DNPSSSLDSRS-FGPIPLGLVKGRVTHILWPPQRVR 156
DN +S+DSR+ G + G + +P +R
Sbjct: 146 DNRRNSMDSRNGLGLFTKKQIAGTSKFVFYPFNEMR 181
>sp|P57347|LEP_BUCAI Signal peptidase I OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=lepB PE=3 SV=1
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 28 YASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKF------------CLQKYKFSHGD 75
+ +I +R P P+ L D +L+EKF ++ K + GD
Sbjct: 68 FLAIFIIRSFIYEPFQIPSGSMMPTLLVGDFILVEKFSYGIKEPITHKILIRTKKPNRGD 127
Query: 76 VIVFCSPSNHKEKHVKRIIGLPGDWI 101
+ VF P++H ++KRIIGLPGD I
Sbjct: 128 IAVFQHPTDHNINYIKRIIGLPGDKI 153
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 112 VPNGHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHI 148
VP G ++ GDN +SLDSR +G +P + G+ I
Sbjct: 254 VPKGEYFMMGDNRDNSLDSRYWGFVPEKNLVGKAIKI 290
>sp|P71013|LEPT_BACSU Signal peptidase I T OS=Bacillus subtilis (strain 168) GN=sipT PE=1
SV=1
Length = 193
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 43/158 (27%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
V GSSM PT + + + + K + GD+++ ++ K +VKR+
Sbjct: 47 VEGSSMYPTLH----------DGERLFVNKTVNYIGELKRGDIVIINGETS-KIHYVKRL 95
Query: 94 IGLPGDWI-----------------------------GTPMTNDV--VKVPNGHCWVEGD 122
IG PG+ + G +T D VKVP G +V GD
Sbjct: 96 IGKPGETVQMKDDTLYINGKKVAEPYLSKNKKEAEKLGVSLTGDFGPVKVPKGKYFVMGD 155
Query: 123 NPSSSLDSRS-FGPIPLGLVKGRVTHILWPPQRVRHVE 159
N +S+DSR+ G I + G + +P +R +
Sbjct: 156 NRLNSMDSRNGLGLIAEDRIVGTSKFVFFPFNEMRQTK 193
>sp|Q10789|LEP_MYCTU Signal peptidase I OS=Mycobacterium tuberculosis GN=lepB PE=1 SV=1
Length = 294
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
Query: 110 VKVPNGHCWVEGDNPSSSLDSRSFGP-----------IPLGLVKGRVTHILWPPQRVRHV 158
V VP G WV GDN + S DSR+ P +P+ V G+ I+WPP R V
Sbjct: 226 VTVPPGRVWVMGDNRTHSADSRAHCPLLCTDDPLPGTVPVANVIGKARLIVWPPSRWGVV 285
Query: 159 ERKNHQK 165
N Q+
Sbjct: 286 RSVNPQQ 292
>sp|P41025|LEP2_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipS2 PE=3 SV=1
Length = 193
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 43/158 (27%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCLQKYKFSHGDVIVFCSPSNHKEKHVKRI 93
V GSSM PT + + + + K + GD+++ ++ K +VKR+
Sbjct: 47 VEGSSMYPTLH----------DGERLFVNKSVNYIGEIERGDIVIINGDTS-KVHYVKRL 95
Query: 94 IGLPGDWI-----------------------------GTPMTNDV--VKVPNGHCWVEGD 122
IG PG+ + G +T D VKVP G +V GD
Sbjct: 96 IGKPGETVEMKNDTLYINGKKIAEPYLASNKKEAKKLGVNLTGDFGPVKVPKGKYFVMGD 155
Query: 123 NPSSSLDSRS-FGPIPLGLVKGRVTHILWPPQRVRHVE 159
N +S+DSR+ G I + G + +P +R +
Sbjct: 156 NRLNSMDSRNGLGLIAENRIVGTSKFVFFPFHDMRQTK 193
>sp|P0A1W2|LEP_SALTY Signal peptidase I OS=Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720) GN=lepB PE=3 SV=1
Length = 324
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 13/106 (12%)
Query: 21 GLTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCL-------QKYKFS- 72
G +V A ++ VR P P+ L D +L+EKF QK
Sbjct: 64 GASVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIET 123
Query: 73 ----HGDVIVFCSPSNHKEKHVKRIIGLPGDWIG-TPMTNDVVKVP 113
GD++VF P + K ++KR +GLPGD I P+ +V P
Sbjct: 124 GHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKITYDPVAKEVTIQP 169
>sp|P0A1W3|LEP_SALTI Signal peptidase I OS=Salmonella typhi GN=lepB PE=3 SV=1
Length = 324
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 13/106 (12%)
Query: 21 GLTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCL-------QKYKFS- 72
G +V A ++ VR P P+ L D +L+EKF QK
Sbjct: 64 GASVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIET 123
Query: 73 ----HGDVIVFCSPSNHKEKHVKRIIGLPGDWIG-TPMTNDVVKVP 113
GD++VF P + K ++KR +GLPGD I P+ +V P
Sbjct: 124 GHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKITYDPVAKEVTIQP 169
>sp|Q89AM6|LEP_BUCBP Signal peptidase I OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=lepB PE=3 SV=1
Length = 310
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 74 GDVIVFCSPSNHKEKHVKRIIGLPGDWIG-TPMTNDVVKVPNG 115
GD++VF P+N+ +VKRI+GLPGD I +T + PN
Sbjct: 120 GDIVVFKHPNNNAINYVKRIVGLPGDKINYNILTKRLTITPNN 162
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 84 NHKEKHVKRIIGLPGDWIGTPMTNDVVKVPNGHCWVEGDNPSSSLDSRSFGPIPLGLVKG 143
+ K+ + K+ G WI VP +V GDN +SLDSR +G +P + G
Sbjct: 232 DQKDLYFKQFSQKQGTWI----------VPKHKYFVLGDNRDNSLDSRYWGFVPEKNLIG 281
Query: 144 RVTHI 148
+V I
Sbjct: 282 KVVFI 286
>sp|Q9ZE32|LEP_RICPR Signal peptidase I OS=Rickettsia prowazekii (strain Madrid E)
GN=lepB PE=3 SV=1
Length = 264
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 22/99 (22%)
Query: 34 VRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFC-------LQKYKFSH------------- 73
+R M P PT L +D++ K+ L + F H
Sbjct: 29 IRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIHLFKGRVFAREPER 88
Query: 74 GDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVVKV 112
GD++VF P++ +++KR+IGLPGD I + +DV+ +
Sbjct: 89 GDIVVFRPPNDMSVRYIKRLIGLPGDKI--QLIDDVIYI 125
>sp|Q4UKA7|LEP_RICFE Signal peptidase I OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=lepB PE=3 SV=1
Length = 266
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 72 SHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVVKV 112
GD++VF P++ +++KR+IGLPGD I + +DV+ +
Sbjct: 89 ERGDIVVFRPPNDMNVRYIKRLIGLPGDKI--QLIDDVIYI 127
>sp|P00803|LEP_ECOLI Signal peptidase I OS=Escherichia coli (strain K12) GN=lepB PE=1
SV=2
Length = 324
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Query: 21 GLTVSDRYASIVPVRGSSMSPTFNPTTDSFMGSLSDDHVLMEKFCL-------QKYKFS- 72
G +V A ++ VR P P+ L D +L+EKF QK
Sbjct: 64 GASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIET 123
Query: 73 ----HGDVIVFCSPSNHKEKHVKRIIGLPGD 99
GD++VF P + K ++KR +GLPGD
Sbjct: 124 GHPKRGDIVVFKYPEDPKLDYIKRAVGLPGD 154
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 112 VPNGHCWVEGDNPSSSLDSRSFGPIPLGLVKGRVTHI 148
VP G ++ GDN +S DSR +G +P + GR T I
Sbjct: 264 VPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAI 300
>sp|Q8L2J7|LEP_RICTY Signal peptidase I OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=lepB PE=1 SV=1
Length = 264
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 72 SHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVVKV 112
GD++VF P++ +++KR+IGLPGD I + +DV+ +
Sbjct: 87 ERGDIVVFRPPNDMSVRYIKRLIGLPGDKI--QLIDDVIYI 125
>sp|A8GM78|LEP_RICAH Signal peptidase I OS=Rickettsia akari (strain Hartford) GN=lepB
PE=3 SV=1
Length = 266
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 72 SHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVVKV 112
GD++VF P++ +++KR+IGLPGD I + +DV+ +
Sbjct: 89 ERGDIVVFRPPNDMNVRYIKRLIGLPGDKI--QLIDDVIYI 127
>sp|Q92JB1|LEP_RICCN Signal peptidase I OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=lepB PE=3 SV=1
Length = 266
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 73 HGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVVKV 112
GD++VF P++ +++KR+IGLPGD I + +DV+ +
Sbjct: 90 RGDIVVFRPPNDMSVRYIKRLIGLPGDKI--QLIDDVIYI 127
>sp|A8GQT7|LEP_RICRS Signal peptidase I OS=Rickettsia rickettsii (strain Sheila Smith)
GN=lepB PE=1 SV=1
Length = 266
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 73 HGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVVKV 112
GD++VF P++ +++KR+IGLPGD I + +DV+ +
Sbjct: 90 RGDIVVFRPPNDMSVRYIKRLIGLPGDKI--QLIDDVIYI 127
>sp|A8EXI2|LEP_RICCK Signal peptidase I OS=Rickettsia canadensis (strain McKiel) GN=lepB
PE=3 SV=1
Length = 265
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 72 SHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVVKV 112
GD++VF P++ +++KR+IGLPGD I + +D++ +
Sbjct: 88 ERGDIVVFRPPNDMSVRYIKRLIGLPGDKI--QLIDDIIYI 126
>sp|Q1RHA1|LEP_RICBR Signal peptidase I OS=Rickettsia bellii (strain RML369-C) GN=lepB
PE=3 SV=1
Length = 291
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 72 SHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVVKV 112
GD+I+F P +++KR+IGLPGD + +DV+ +
Sbjct: 114 ERGDIIIFRPPHEMNTRYIKRLIGLPGD--KVQLIDDVIYI 152
>sp|A8GYE1|LEP_RICB8 Signal peptidase I OS=Rickettsia bellii (strain OSU 85-389) GN=lepB
PE=3 SV=1
Length = 289
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 72 SHGDVIVFCSPSNHKEKHVKRIIGLPGDWIGTPMTNDVVKV 112
GD+I+F P +++KR+IGLPGD + +DV+ +
Sbjct: 112 ERGDIIIFRPPHEMNTRYIKRLIGLPGD--KVQLIDDVIYI 150
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,030,415
Number of Sequences: 539616
Number of extensions: 3228855
Number of successful extensions: 6185
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6066
Number of HSP's gapped (non-prelim): 108
length of query: 170
length of database: 191,569,459
effective HSP length: 109
effective length of query: 61
effective length of database: 132,751,315
effective search space: 8097830215
effective search space used: 8097830215
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)