Query 030864
Match_columns 170
No_of_seqs 193 out of 330
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 08:44:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030864.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030864hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ct9_A Asparagine synthetase B 99.9 6.5E-23 2.2E-27 187.5 14.2 110 42-160 32-149 (553)
2 1jgt_A Beta-lactam synthetase; 99.9 2.1E-22 7.1E-27 182.7 10.7 78 74-160 69-147 (513)
3 1xff_A D-fructose-6-, glucosam 99.8 5.6E-19 1.9E-23 145.2 16.2 84 74-160 91-182 (240)
4 1q15_A CARA; CMPR, (2S,5S)-5-c 99.8 9.4E-20 3.2E-24 164.8 11.3 101 46-160 27-131 (503)
5 1ao0_A Glutamine phosphoribosy 99.8 2.8E-18 9.7E-23 153.2 14.0 87 72-160 93-184 (459)
6 2bpl_A Glucosamine--fructose-6 99.7 8.4E-17 2.9E-21 147.7 15.6 84 74-160 91-182 (608)
7 1ecf_A Glutamine phosphoribosy 99.7 3.1E-17 1.1E-21 148.4 12.2 97 64-161 84-195 (504)
8 3mdn_A Glutamine aminotransfer 99.5 8.9E-15 3E-19 123.9 6.3 84 74-160 107-214 (274)
9 1te5_A Conserved hypothetical 98.5 7.5E-08 2.6E-12 80.2 3.4 82 74-158 101-204 (257)
10 1ea0_A Glutamate synthase [NAD 98.1 8.7E-06 3E-10 82.6 10.3 79 78-159 228-356 (1479)
11 1ofd_A Ferredoxin-dependent gl 98.0 3E-05 1E-09 78.9 10.9 80 77-159 223-355 (1520)
12 1hle_B Horse leukocyte elastas 70.2 5.4 0.00018 22.7 3.4 21 128-148 6-27 (31)
13 2xn6_B Thyroxine-binding globu 69.8 5.3 0.00018 23.5 3.4 21 128-148 7-28 (35)
14 4afx_B Protein Z dependent pro 69.8 5.7 0.00019 23.5 3.6 22 127-148 7-29 (36)
15 2h4p_B MENT, heterochromatin-a 69.5 5.5 0.00019 23.2 3.4 21 128-148 7-28 (34)
16 1as4_B Antichymotrypsin, ACT; 68.7 3.4 0.00011 24.7 2.4 21 128-148 9-30 (37)
17 2riv_B Thyroxine-binding globu 67.4 6.1 0.00021 23.9 3.4 22 127-148 11-33 (40)
18 3ndd_B Alpha-1-antitrypsin; se 58.7 12 0.00043 22.0 3.6 22 127-148 7-29 (36)
19 3f02_C Neuroserpin; cleaved fo 56.7 12 0.0004 23.6 3.4 23 127-149 9-32 (48)
20 1m93_C Serine proteinase inhib 46.8 22 0.00075 21.5 3.4 22 127-148 13-34 (41)
21 4au2_A HSP47, serpin peptidase 40.5 24 0.00082 30.2 3.9 28 127-154 349-379 (392)
22 2cpd_A Apobec-1 stimulating pr 32.6 56 0.0019 21.5 4.0 38 97-140 24-61 (99)
23 1mtp_B Serine proteinase inhib 31.1 40 0.0014 20.6 2.8 21 127-148 12-32 (43)
24 3d2w_A TAR DNA-binding protein 26.1 66 0.0023 21.2 3.5 41 96-141 19-59 (89)
25 1m40_A TEM-1, beta-lactamase T 25.6 42 0.0014 26.0 2.7 34 123-156 10-43 (263)
26 2pef_A Serine protease inhibit 25.6 51 0.0017 27.9 3.4 21 128-148 347-368 (373)
27 2dgu_A Heterogeneous nuclear r 25.5 64 0.0022 21.4 3.3 36 97-140 20-55 (103)
28 2dgt_A RNA-binding protein 30; 23.9 98 0.0033 19.9 4.0 35 98-140 20-54 (92)
29 4dy0_A GLIA-derived nexin; ser 23.5 59 0.002 27.6 3.4 22 127-148 353-375 (379)
30 2x9a_A Attachment protein G3P; 23.2 35 0.0012 23.3 1.6 19 70-88 21-39 (65)
31 3dy0_B C-terminus plasma serin 23.0 81 0.0028 17.5 2.9 19 128-148 7-25 (29)
32 3lf5_A Cytochrome B5 reductase 22.8 29 0.00098 24.1 1.1 22 72-93 18-39 (88)
33 1x3x_A Cytochrome B5; hemoprot 22.5 30 0.001 23.5 1.1 22 72-93 16-37 (82)
34 2ibj_A Cytochrome B5, CYTB5; F 22.1 30 0.001 23.7 1.0 22 72-93 19-40 (88)
35 2p74_A Beta-lactamase CTX-M-9A 22.1 52 0.0018 25.3 2.6 32 123-155 11-42 (263)
36 3ner_A Cytochrome B5 type B; h 21.9 31 0.001 24.2 1.1 22 72-93 22-43 (92)
37 1hko_A Cytochrome B5; electron 21.4 44 0.0015 23.9 1.9 22 72-93 21-42 (104)
38 1cyo_A Cytochrome B5; electron 21.3 32 0.0011 24.0 1.1 22 72-93 17-38 (93)
39 1vcc_A DNA topoisomerase I; DN 21.0 61 0.0021 22.7 2.4 21 140-160 54-74 (77)
40 1cxy_A Cytochrome B5; helix, b 20.6 34 0.0012 23.6 1.1 22 72-93 20-41 (90)
41 2ivf_C Ethylbenzene dehydrogen 20.5 39 0.0013 27.5 1.6 19 131-155 184-202 (214)
No 1
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=99.89 E-value=6.5e-23 Score=187.53 Aligned_cols=110 Identities=18% Similarity=0.305 Sum_probs=89.7
Q ss_pred CCceEEEeCCceeeeEe-----cCCCCCcccceecccCcEEEEEceeecCHHHHHHHhC--C-CCCCchHHHHHHHHHHh
Q 030864 42 SSAVSVQVGDNVTLAYT-----HQNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYG--L-AKSANEVILVIEAYKAL 113 (170)
Q Consensus 42 p~a~~v~~g~~~~lAy~-----~~~q~~~~~r~f~~~~~i~~vFNGEIyN~~eLr~~~g--~-~ks~sE~~vii~aY~~~ 113 (170)
||+..+-..+...|+.+ ... .-.|| +....++++++|||||||+.+||+++. + .++.||+|||+++|++
T Consensus 32 pD~~G~~~~~~~~lgh~Rlsi~~~~-~~~QP-~~~~~~~~~lv~NGeIyN~~eLr~~L~~~~~f~s~sDtEvil~l~~~- 108 (553)
T 1ct9_A 32 PDWSGIYASDNAILAHERLSIVDVN-AGAQP-LYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEVILALYQE- 108 (553)
T ss_dssp BTEEEEEECSSEEEEEEECCCSCTT-TCCSS-EECTTSCEEEEEEEEETTHHHHHHHHTTTSCCCSCCTTHHHHHHHHH-
T ss_pred CCcccEEEECCEEEEEEeeeeeCCC-CCCCC-eEeCCCCEEEEEEEEEECHHHHHHHHhccCccCCCCcHHHHHHHHHH-
Confidence 99888877654444443 322 33455 344567899999999999999999974 2 3788999999999996
Q ss_pred hhcCCCCcccccccCCceEEEEEEeCCCCeEEEEeeCCCCcceeeEE
Q 030864 114 RDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASVLAASHLLLSLK 160 (170)
Q Consensus 114 rdrGpyp~~~~l~~L~GmFAFviyD~~~~~lf~ARDr~G~kPLY~~~ 160 (170)
|| .+++++|+|||||+|||.+++++++|||++|+|||||.+
T Consensus 109 --~g----~~~l~~l~G~fa~~i~d~~~~~l~~aRD~~G~~PLy~~~ 149 (553)
T 1ct9_A 109 --KG----PEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGY 149 (553)
T ss_dssp --HT----TTTGGGCCEEEEEEEEETTTTEEEEEECTTCCSCCEEEE
T ss_pred --HH----HHHHHhCCccEEEEEEECCCCEEEEEECCCCCCCeEEEE
Confidence 56 479999999999999999999999999999999999876
No 2
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=99.87 E-value=2.1e-22 Score=182.74 Aligned_cols=78 Identities=18% Similarity=0.183 Sum_probs=71.2
Q ss_pred CcEEEEEceeecCHHHHHHHhCC-CCCCchHHHHHHHHHHhhhcCCCCcccccccCCceEEEEEEeCCCCeEEEEeeCCC
Q 030864 74 DEIFCLFEGALDNLGSLRQQYGL-AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASVLAA 152 (170)
Q Consensus 74 ~~i~~vFNGEIyN~~eLr~~~g~-~ks~sE~~vii~aY~~~rdrGpyp~~~~l~~L~GmFAFviyD~~~~~lf~ARDr~G 152 (170)
++++++|||||||+.+||+++++ .+|.||+|||+++|++ || .+++++|+|||||+|||..+ +++|||++|
T Consensus 69 ~~~~lv~NGeIyN~~eLr~~L~~~f~t~sDtEvil~l~~~---~g----~~~~~~l~G~fA~~i~d~~~--l~~aRD~~G 139 (513)
T 1jgt_A 69 APTTAVLAGEIYNRDELLSVLPAGPAPEGDAELVLRLLER---YD----LHAFRLVNGRFATVVRTGDR--VLLATDHAG 139 (513)
T ss_dssp SSEEEEEEEEESCHHHHHHTSCSSCCCSSHHHHHHHHHHH---HG----GGGGGTCCEEEEEEEEETTE--EEEEECTTC
T ss_pred CCEEEEEEEEEeCHHHHHHHhCCCCCCCCHHHHHHHHHHH---Hh----HHhHhhcCeeEEEEEEECCE--EEEEECCCC
Confidence 78999999999999999999864 3899999999999996 45 47999999999999999876 999999999
Q ss_pred CcceeeEE
Q 030864 153 SHLLLSLK 160 (170)
Q Consensus 153 ~kPLY~~~ 160 (170)
+|||||..
T Consensus 140 ~kPLyy~~ 147 (513)
T 1jgt_A 140 SVPLYTCV 147 (513)
T ss_dssp CSCCEEEE
T ss_pred CceeEEEE
Confidence 99999864
No 3
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A*
Probab=99.81 E-value=5.6e-19 Score=145.16 Aligned_cols=84 Identities=17% Similarity=0.215 Sum_probs=71.3
Q ss_pred CcEEEEEceeecCHHHHHHHh---CC-CCCCchHHHHHHHHHHhhhcCCCCc---ccccccCCceEEEEEEeCC-CCeEE
Q 030864 74 DEIFCLFEGALDNLGSLRQQY---GL-AKSANEVILVIEAYKALRDRAPYPP---NHVVGHLSGYFAFIVYDKS-TSTLF 145 (170)
Q Consensus 74 ~~i~~vFNGEIyN~~eLr~~~---g~-~ks~sE~~vii~aY~~~rdrGpyp~---~~~l~~L~GmFAFviyD~~-~~~lf 145 (170)
+++++++||+|||+.+||+++ |+ .++.||+|+|+++|+.+.+.|+-+. .+++++|+|||||+|||.. .+++|
T Consensus 91 ~~~~l~hNG~I~N~~~lr~~L~~~g~~f~~~sDsEvi~~l~~~~~~~g~~~~~ai~~~~~~l~G~fa~~i~d~~~~~~l~ 170 (240)
T 1xff_A 91 EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLL 170 (240)
T ss_dssp TTEEEEEEEEETTHHHHHHHHHHTTCCCCSCCSHHHHHHHHHHHHHTSSCHHHHHHHHGGGCCEEEEEEEEETTCTTCEE
T ss_pred CCEEEEEEEEECCHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcccceEEEEEecCCCCEEE
Confidence 789999999999999999986 55 3789999999999998765453111 1689999999999999986 69999
Q ss_pred EEeeCCCCcceeeEE
Q 030864 146 VASVLAASHLLLSLK 160 (170)
Q Consensus 146 ~ARDr~G~kPLY~~~ 160 (170)
+|||+ ||||+..
T Consensus 171 ~~Rd~---~PL~~~~ 182 (240)
T 1xff_A 171 AARSG---SPLVIGL 182 (240)
T ss_dssp EEEEB---SCCEEEE
T ss_pred EEECC---CceEEEE
Confidence 99998 9999864
No 4
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=99.81 E-value=9.4e-20 Score=164.78 Aligned_cols=101 Identities=14% Similarity=0.151 Sum_probs=82.8
Q ss_pred EEEeCCceeeeEecCCCCCcccceecccCcEEEEEceeecCHH---HHHHHhC-CCCCCchHHHHHHHHHHhhhcCCCCc
Q 030864 46 SVQVGDNVTLAYTHQNESPLRQRSFAVKDEIFCLFEGALDNLG---SLRQQYG-LAKSANEVILVIEAYKALRDRAPYPP 121 (170)
Q Consensus 46 ~v~~g~~~~lAy~~~~q~~~~~r~f~~~~~i~~vFNGEIyN~~---eLr~~~g-~~ks~sE~~vii~aY~~~rdrGpyp~ 121 (170)
.+.+|+ .++|... ....|| +....++++++ |||||+. +||+++. ..++.||+|||+++|++ ||
T Consensus 27 ~~~igh-~R~~t~~--~~~~QP-~~~~~~~~~l~--GeI~N~~~~~eLr~~l~g~f~s~sDtEvil~l~~~---~g---- 93 (503)
T 1q15_A 27 GEALSN-GYLFIEQ--NGHYQK-CEMERGTAYLI--GSLYNRTFLIGLAGVWEGEAYLANDAELLALLFTR---LG---- 93 (503)
T ss_dssp EEEETT-EEEEEET--TCCEEE-EECSSSEEEEE--ECCSCHHHHHHHHTTTCGGGGGCCHHHHHHHHHHH---HC----
T ss_pred ceeEee-eeEEEcC--CCCCCC-cCcCCCeEEEE--EEEeCCCChHHHHHHhhCCCCCCChHHHHHHHHHH---HH----
Confidence 467787 7787753 234566 34455677777 9999999 9999873 22789999999999996 56
Q ss_pred ccccccCCceEEEEEEeCCCCeEEEEeeCCCCcceeeEE
Q 030864 122 NHVVGHLSGYFAFIVYDKSTSTLFVASVLAASHLLLSLK 160 (170)
Q Consensus 122 ~~~l~~L~GmFAFviyD~~~~~lf~ARDr~G~kPLY~~~ 160 (170)
.+++++|+|||||+|||..++ +++|||++|+|||||..
T Consensus 94 ~~~l~~l~G~fa~~i~d~~~~-l~~aRD~~G~rPL~y~~ 131 (503)
T 1q15_A 94 ANALALAEGDFCFFIDEPNGE-LTVITESRGFSPVHVVQ 131 (503)
T ss_dssp GGGGGGCCSSEEEEEECTTSC-EEEEECSSSSSCCEEEE
T ss_pred HHHHHHcCEEEEEEEEeCCCC-EEEEECCCCCeeEEEEE
Confidence 479999999999999999998 99999999999999974
No 5
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.77 E-value=2.8e-18 Score=153.20 Aligned_cols=87 Identities=17% Similarity=0.164 Sum_probs=71.4
Q ss_pred ccCcEEEEEceeecCHHHHHHHh---CC-CCCCchHHHHHHHHHHhhhcCCC-CcccccccCCceEEEEEEeCCCCeEEE
Q 030864 72 VKDEIFCLFEGALDNLGSLRQQY---GL-AKSANEVILVIEAYKALRDRAPY-PPNHVVGHLSGYFAFIVYDKSTSTLFV 146 (170)
Q Consensus 72 ~~~~i~~vFNGEIyN~~eLr~~~---g~-~ks~sE~~vii~aY~~~rdrGpy-p~~~~l~~L~GmFAFviyD~~~~~lf~ 146 (170)
..+++++++||+|||+.+||+++ |. .+++||+|+|+++|..+++..+. -..+++++|+|+|||+||| .+++++
T Consensus 93 ~~g~~~l~hNG~I~N~~~Lr~~L~~~g~~f~~~sDsEvi~~l~~~~~~~~~~~a~~~~~~~l~G~fa~~i~d--~~~l~~ 170 (459)
T 1ao0_A 93 NNGSLALAHNGNLVNATQLKQQLENQGSIFQTSSDTEVLAHLIKRSGHFTLKDQIKNSLSMLKGAYAFLIMT--ETEMIV 170 (459)
T ss_dssp TTCCEEEEEEEEETTHHHHHHHHHHTTCCCCSSCHHHHHHHHHHTCCCSSHHHHHHHHHTTCCEEEEEEEEC--SSEEEE
T ss_pred CCCcEEEEEEEEecCHHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhccCCHHHHHHHHHHhhccceEEEEEe--CCEEEE
Confidence 45789999999999999999986 55 48999999999999963210000 0036999999999999999 589999
Q ss_pred EeeCCCCcceeeEE
Q 030864 147 ASVLAASHLLLSLK 160 (170)
Q Consensus 147 ARDr~G~kPLY~~~ 160 (170)
+||++|+||||+..
T Consensus 171 ~RD~~G~rPL~~~~ 184 (459)
T 1ao0_A 171 ALDPNGLRPLSIGM 184 (459)
T ss_dssp EECTTCCSCCEEEE
T ss_pred EECCCCCCCeEEEe
Confidence 99999999999865
No 6
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=99.72 E-value=8.4e-17 Score=147.74 Aligned_cols=84 Identities=17% Similarity=0.214 Sum_probs=72.3
Q ss_pred CcEEEEEceeecCHHHHHHHh---CC-CCCCchHHHHHHHHHHhhhcCCCCc---ccccccCCceEEEEEEeCCC-CeEE
Q 030864 74 DEIFCLFEGALDNLGSLRQQY---GL-AKSANEVILVIEAYKALRDRAPYPP---NHVVGHLSGYFAFIVYDKST-STLF 145 (170)
Q Consensus 74 ~~i~~vFNGEIyN~~eLr~~~---g~-~ks~sE~~vii~aY~~~rdrGpyp~---~~~l~~L~GmFAFviyD~~~-~~lf 145 (170)
+++++++||+|||+.+||+++ |+ .+++||+|+|+++|+.+.++|+-+. .+++++|+|+|||++||..+ ++++
T Consensus 91 ~~~~lvhNG~I~N~~~Lr~~L~~~g~~f~s~tDtEvi~~l~~~~~~~g~~~~~av~~~~~~l~G~fa~~i~d~~~~~~l~ 170 (608)
T 2bpl_A 91 EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLL 170 (608)
T ss_dssp TTEEEEEEECCTTHHHHHHHHHHHTCCCSCCCHHHHHHHHHHHHHTTCCCHHHHHHHHGGGCCSSEEEEEEETTCTTCEE
T ss_pred CCEEEEEEEEEeCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHhhcCceEEEEEecCCCCEEE
Confidence 789999999999999999986 65 3899999999999998655563100 15899999999999999998 9999
Q ss_pred EEeeCCCCcceeeEE
Q 030864 146 VASVLAASHLLLSLK 160 (170)
Q Consensus 146 ~ARDr~G~kPLY~~~ 160 (170)
+|||+ +|||++.
T Consensus 171 ~aRd~---~PL~~g~ 182 (608)
T 2bpl_A 171 AARSG---SPLVIGL 182 (608)
T ss_dssp EEEEB---SCCEEEE
T ss_pred EEECC---CceEEEE
Confidence 99998 9999874
No 7
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.72 E-value=3.1e-17 Score=148.36 Aligned_cols=97 Identities=13% Similarity=0.095 Sum_probs=74.9
Q ss_pred CcccceecccCcEEEEEceeecCHHHHHHHh----CC-CCCCchHHHHHHHHHHhhh-cCCC---Ccc------cccccC
Q 030864 64 PLRQRSFAVKDEIFCLFEGALDNLGSLRQQY----GL-AKSANEVILVIEAYKALRD-RAPY---PPN------HVVGHL 128 (170)
Q Consensus 64 ~~~~r~f~~~~~i~~vFNGEIyN~~eLr~~~----g~-~ks~sE~~vii~aY~~~rd-rGpy---p~~------~~l~~L 128 (170)
-.||-..+..+++++++||+|||+.+||+++ +. .+++||+|+|+++|.++.+ +|+. +.+ +++++|
T Consensus 84 n~QP~~~~~~~~~~l~hNG~i~N~~eLr~~L~~~g~~~f~s~sDsEvi~~l~~~~~~~~g~~~~~~~~~~~a~~~~~~~l 163 (504)
T 1ecf_A 84 EAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLI 163 (504)
T ss_dssp CCSCEEECSSSCEEEEEEEEETTHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHTTCCSSSCCHHHHHHHHHHHHHHC
T ss_pred ccCCeEeccCCCEEEEEeeeecCHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHHHhccccccccccHHHHHHHhhhhc
Confidence 3455333333469999999999999999986 23 4899999999999987533 3420 001 579999
Q ss_pred CceEEEEEEeCCCCeEEEEeeCCCCcceeeEEE
Q 030864 129 SGYFAFIVYDKSTSTLFVASVLAASHLLLSLKV 161 (170)
Q Consensus 129 ~GmFAFviyD~~~~~lf~ARDr~G~kPLY~~~~ 161 (170)
+|+|||++||.. +++|++||++|+||||++..
T Consensus 164 ~G~fa~v~~~~~-~~l~a~RD~~GirPL~~g~~ 195 (504)
T 1ecf_A 164 RGAYACVAMIIG-HGMVAFRDPNGIRPLVLGKR 195 (504)
T ss_dssp CEEEEEEEEETT-TEEEEEECTTCCSCCEEEEE
T ss_pred CccceEEEEEcC-CeEEEEECCCCCCceEEeec
Confidence 999999999864 47999999999999998754
No 8
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi}
Probab=99.52 E-value=8.9e-15 Score=123.91 Aligned_cols=84 Identities=13% Similarity=0.139 Sum_probs=66.4
Q ss_pred CcEEEEEceeecCHHHHHHHh---C----C--CCCCchHHHHHHHHHHhhhcCCCCc---ccccccCCce----------
Q 030864 74 DEIFCLFEGALDNLGSLRQQY---G----L--AKSANEVILVIEAYKALRDRAPYPP---NHVVGHLSGY---------- 131 (170)
Q Consensus 74 ~~i~~vFNGEIyN~~eLr~~~---g----~--~ks~sE~~vii~aY~~~rdrGpyp~---~~~l~~L~Gm---------- 131 (170)
+++.+++||+|||+.+||+++ | + .+++||+|+|+++|..++..+ -|. .+++++|+|+
T Consensus 107 g~~~~~HNG~I~N~~~Lr~~L~~~g~~~~f~~~~~~TDSEvi~~l~~~~~~~~-~~~~al~~~l~~l~G~~~~~g~~~~~ 185 (274)
T 3mdn_A 107 RRWCFMHNGQVGGFEAFRKQADMAIADEFYTYRKGSTDSEVLFLLALSEGLEH-DPHGALARAIARLEGLSRAHGTTPHM 185 (274)
T ss_dssp TTEEEEEEEEETTGGGGHHHHHHTSCHHHHTTCCSCCHHHHHHHHHHHTTTTT-CHHHHHHHHHHHHHHHHHHHSCSSSE
T ss_pred CCEEEEEeeEEcCHHHHHHHHHhhCCcceecCCCCCChHHHHHHHHHHhhhcC-CHHHHHHHHHHHHHhHHhhcCcccCc
Confidence 789999999999999999875 3 2 278999999999996532111 111 1689999999
Q ss_pred -EEEEEEeCCCCeEEEEeeC-CCCcceeeEE
Q 030864 132 -FAFIVYDKSTSTLFVASVL-AASHLLLSLK 160 (170)
Q Consensus 132 -FAFviyD~~~~~lf~ARDr-~G~kPLY~~~ 160 (170)
|+|+++|. ++++++||+ +|++||+|+.
T Consensus 186 a~~~~~~d~--~~l~a~Rd~~~G~~Pll~~~ 214 (274)
T 3mdn_A 186 RLSAAFSDG--QTLYAARYSSDHIAPSVYYR 214 (274)
T ss_dssp EEEEEEECS--SCEEEEEEESSSCCCCCEEE
T ss_pred eEEEEEEcC--CEEEEEECCCCCCCCeEEEE
Confidence 99999985 789999998 9999965543
No 9
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1
Probab=98.46 E-value=7.5e-08 Score=80.24 Aligned_cols=82 Identities=12% Similarity=0.042 Sum_probs=61.8
Q ss_pred CcEEEEEceeecCHHHHHHHhCCCCCCchHHHHHHHHHHhh-hcCCC-C-cc---cccccCC------ceEEEEEEeCCC
Q 030864 74 DEIFCLFEGALDNLGSLRQQYGLAKSANEVILVIEAYKALR-DRAPY-P-PN---HVVGHLS------GYFAFIVYDKST 141 (170)
Q Consensus 74 ~~i~~vFNGEIyN~~eLr~~~g~~ks~sE~~vii~aY~~~r-drGpy-p-~~---~~l~~L~------GmFAFviyD~~~ 141 (170)
+++.++.||.|.|+.+ |++.+...++||+|+|.++..... +.++- | .+ +.++++. |.|+|++-|.
T Consensus 101 ~~~a~aHNG~i~n~~~-r~~~~~~~s~TDSEvi~~li~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~G~~n~~l~~g-- 177 (257)
T 1te5_A 101 RYWTFAHNGQLADFQP-KPGFYRPVGETDSEAAFCDLLNRVRRAFPEPVPVEVLLPVLISACDEYRKKGVFNALISDG-- 177 (257)
T ss_dssp EEEEEEEESCBSSCCC-CCCSSCCSSCCHHHHHHHHHHHHHHHHCSSCCCHHHHHHHHHHHHHHHHTTBCCEEEEESS--
T ss_pred CeEEEEecCcccCchh-hhccCCcccCCHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHhcCcEEEEEEcC--
Confidence 5799999999999999 776433588999999988886432 22111 1 11 3555555 9999999985
Q ss_pred CeEEEEee----------CCCCcceee
Q 030864 142 STLFVASV----------LAASHLLLS 158 (170)
Q Consensus 142 ~~lf~ARD----------r~G~kPLY~ 158 (170)
.+|++.|| ++|.+||..
T Consensus 178 ~~l~a~rd~~L~~~~~~~p~g~rpL~~ 204 (257)
T 1te5_A 178 DWLFTFCSSKLAYITRRAPFGPARLKD 204 (257)
T ss_dssp SCEEEECSSCEEEEEEESSCCCEEEEC
T ss_pred CEEEEEEcCCceEEeecCCCccccccc
Confidence 78999999 999999963
No 10
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=98.13 E-value=8.7e-06 Score=82.60 Aligned_cols=79 Identities=8% Similarity=0.013 Sum_probs=59.5
Q ss_pred EEEceeecCHHHHHHHh------------C--------C-CCCCchHHHHHHHHHHhhhcCCCCcc--------------
Q 030864 78 CLFEGALDNLGSLRQQY------------G--------L-AKSANEVILVIEAYKALRDRAPYPPN-------------- 122 (170)
Q Consensus 78 ~vFNGEIyN~~eLr~~~------------g--------~-~ks~sE~~vii~aY~~~rdrGpyp~~-------------- 122 (170)
++.||||.|+..+|... | . ..+.||+++|.++.+.|...| .+..
T Consensus 228 laHNGeInn~~~nr~~m~are~~~~~~~~G~~l~~~~pii~~~~SDSevld~~lelL~~~g-~~l~~A~~~liPeaw~~~ 306 (1479)
T 1ea0_A 228 LAHNGEINTVKGNVNWMKAHETRMEHPAFGTHMQDLKPVIGVGLSDSGSLDTVFEVMVRAG-RTAPMVKMMLVPQALTSS 306 (1479)
T ss_dssp EEEEECCTTHHHHHHHHHHHGGGCCCSTTGGGHHHHCCSSCTTCCHHHHHHHHHHHHHHTT-CCHHHHHHHHSCCCCC--
T ss_pred EEECChhhCHHHHHHHHHHhHhhhcCchhhhhHHhcCCcCCCCCCcHHHHHHHHHHHHHcC-CCHHHHHHHhCchhhccc
Confidence 89999999999999542 2 2 478899998855544332233 1111
Q ss_pred ---------------cccccCCceEEEEEEeCCCCeEEEEeeCCCCcceeeE
Q 030864 123 ---------------HVVGHLSGYFAFIVYDKSTSTLFVASVLAASHLLLSL 159 (170)
Q Consensus 123 ---------------~~l~~L~GmFAFviyD~~~~~lf~ARDr~G~kPLY~~ 159 (170)
.++..++|-||+++-|. +.+.++|||+|.+||-++
T Consensus 307 ~~m~~~~~~fye~~~~~me~~dGp~slv~~dg--~~l~a~~DrnGlRPl~~g 356 (1479)
T 1ea0_A 307 QTTPDNHKALIQYCNSVMEPWDGPAALAMTDG--RWVVGGMDRNGLRPMRYT 356 (1479)
T ss_dssp -CCCHHHHHHHHHHHHHCCCCCSSEEEEECSS--SEEEEECCTTCCSCCEEE
T ss_pred ccCCHHHHHHHHHHHHhhccCCCcEEEEEEeC--CEEEEEecCCCCcceEEE
Confidence 23679999999999765 899999999999999876
No 11
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=97.98 E-value=3e-05 Score=78.90 Aligned_cols=80 Identities=9% Similarity=0.007 Sum_probs=59.6
Q ss_pred EEEEceeecCHHHHH------HH------h--------C--CCCCCchHHHHHHHHHHhhhcCCCCcc------------
Q 030864 77 FCLFEGALDNLGSLR------QQ------Y--------G--LAKSANEVILVIEAYKALRDRAPYPPN------------ 122 (170)
Q Consensus 77 ~~vFNGEIyN~~eLr------~~------~--------g--~~ks~sE~~vii~aY~~~rdrGpyp~~------------ 122 (170)
+++.||||.|+..+| +. + + ...+.||+++|.++.+-+-..| .+..
T Consensus 223 ~LaHNGeInt~~~nrnwm~aR~~~~~s~~~~g~~l~~~~p~i~~~~SDSe~ld~~lelL~~~g-~~l~~A~~~liPeaw~ 301 (1520)
T 1ofd_A 223 LLGHNGEINTLLGNINWMAAREKELEVSGWTKAELEALTPIVNQANSDSYNLDSALELLVRTG-RSPLEAAMILVPEAYK 301 (1520)
T ss_dssp SEEEEECCTTHHHHHHHHHHHGGGCCCTTCCHHHHHHHCCSCCTTSCHHHHHHHHHHHHHHTT-CCHHHHHHHHSCCCCT
T ss_pred eeEecchhhcHHHHHHHHHHHHHHhcCcccchhhHHhhCCcCCCCCCcHHHHHHHHHHHHhcC-CCHHHHHHHhCcchhc
Confidence 389999999999998 32 1 3 2478889988865555332223 1111
Q ss_pred -------------------cccccCCceEEEEEEeCCCCeEEEEeeCCCCcceeeE
Q 030864 123 -------------------HVVGHLSGYFAFIVYDKSTSTLFVASVLAASHLLLSL 159 (170)
Q Consensus 123 -------------------~~l~~L~GmFAFviyD~~~~~lf~ARDr~G~kPLY~~ 159 (170)
.++..++|-||+++-|. +.+.++|||+|.+||-|+
T Consensus 302 ~~~~m~~~~~~~~fyey~~~~me~~dGpaalv~~dg--~~l~a~~DrnGlRPl~~~ 355 (1520)
T 1ofd_A 302 NQPALKDYPEISDFHDYYSGLQEPWDGPALLVFSDG--KIVGAGLDRNGLRPARYC 355 (1520)
T ss_dssp TCGGGTTCHHHHHHHHHHTTTCCCCCSSEEEEEECS--SEEEEEECTTCCSCCEEE
T ss_pred ccccccccHHHHHHHHHHHHhcccCCCCEEEEEEeC--CEEEEEecCCCCCceEEE
Confidence 23689999999999876 899999999999999875
No 12
>1hle_B Horse leukocyte elastase inhibitor; hydrolase inhibitor(serine proteinase); 1.95A {Equus caballus} SCOP: e.1.1.1
Probab=70.23 E-value=5.4 Score=22.73 Aligned_cols=21 Identities=19% Similarity=0.447 Sum_probs=16.1
Q ss_pred CCceEEEEEEeCCCCe-EEEEe
Q 030864 128 LSGYFAFIVYDKSTST-LFVAS 148 (170)
Q Consensus 128 L~GmFAFviyD~~~~~-lf~AR 148 (170)
.+=-|-|+|+|+.++. +|++|
T Consensus 6 ~drPFlf~I~~~~t~~iLF~G~ 27 (31)
T 1hle_B 6 ADHPFIFFIRHNPSANILFLGR 27 (31)
T ss_dssp CCSCEEEEEEETTTTEEEEEEE
T ss_pred EeCCEEEEEEECCCCcEEEEEE
Confidence 4567999999999885 56654
No 13
>2xn6_B Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y T44; 1.29A {Homo sapiens} PDB: 2xn5_B* 2xn7_B*
Probab=69.80 E-value=5.3 Score=23.47 Aligned_cols=21 Identities=24% Similarity=0.626 Sum_probs=16.3
Q ss_pred CCceEEEEEEeCCCCe-EEEEe
Q 030864 128 LSGYFAFIVYDKSTST-LFVAS 148 (170)
Q Consensus 128 L~GmFAFviyD~~~~~-lf~AR 148 (170)
.+=-|-|+|+|+.+++ +|++|
T Consensus 7 ~drPFlf~I~~~~t~~iLF~G~ 28 (35)
T 2xn6_B 7 IDRSFMLLILERSTRSILFLGK 28 (35)
T ss_dssp CCBCEEEEEEETTTTEEEEEEE
T ss_pred ecCCEEEEEEECCCCcEEEEEE
Confidence 5667999999998885 46655
No 14
>4afx_B Protein Z dependent protease inhibitor; hydrolase inhibitor, serpin, protein Z dependent inhibitor, coagulation; 2.09A {Homo sapiens} PDB: 4aju_B
Probab=69.80 E-value=5.7 Score=23.53 Aligned_cols=22 Identities=23% Similarity=0.700 Sum_probs=17.1
Q ss_pred cCCceEEEEEEeCCCCe-EEEEe
Q 030864 127 HLSGYFAFIVYDKSTST-LFVAS 148 (170)
Q Consensus 127 ~L~GmFAFviyD~~~~~-lf~AR 148 (170)
.+|--|-|+|+|+.++. +|++|
T Consensus 7 ~~drPFlf~I~~~~t~~iLF~G~ 29 (36)
T 4afx_B 7 KIDRPFHFMIYEETSGMLLFLGR 29 (36)
T ss_dssp ECCSCEEEEEEETTTTEEEEEEE
T ss_pred EeeCCEEEEEEECCCCcEEEEEE
Confidence 45778999999998875 56665
No 15
>2h4p_B MENT, heterochromatin-associated protein MENT; serine protease inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus gallus} PDB: 2h4q_B
Probab=69.51 E-value=5.5 Score=23.15 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=15.8
Q ss_pred CCceEEEEEEeCCCCe-EEEEe
Q 030864 128 LSGYFAFIVYDKSTST-LFVAS 148 (170)
Q Consensus 128 L~GmFAFviyD~~~~~-lf~AR 148 (170)
.+=-|-|+|+|+.++. ||++|
T Consensus 7 ~drPFlf~I~~~~t~~iLF~G~ 28 (34)
T 2h4p_B 7 VDHPFHFFIRHNKSKTILFFGR 28 (34)
T ss_dssp CCSCEEEEEEETTTTEEEEEEE
T ss_pred ecCCEEEEEEECCCCeEEEEEE
Confidence 4567999999998886 45554
No 16
>1as4_B Antichymotrypsin, ACT; serpin, serine protease inhibitor; 2.10A {Homo sapiens} SCOP: e.1.1.1 PDB: 2ach_B* 3caa_B 4caa_B
Probab=68.74 E-value=3.4 Score=24.71 Aligned_cols=21 Identities=19% Similarity=0.431 Sum_probs=16.1
Q ss_pred CCceEEEEEEeCCCCe-EEEEe
Q 030864 128 LSGYFAFIVYDKSTST-LFVAS 148 (170)
Q Consensus 128 L~GmFAFviyD~~~~~-lf~AR 148 (170)
.+=-|-|+|+|+.++. ||++|
T Consensus 9 ~drPFlf~I~~~~t~~iLF~G~ 30 (37)
T 1as4_B 9 FNRPFLMIIVPTDTQNIFFMSK 30 (37)
T ss_dssp CCSCEEEEEEETTSSCCSEEEE
T ss_pred ecCCEEEEEEeCCCCcEEEEEE
Confidence 5678999999998875 56555
No 17
>2riv_B Thyroxine-binding globulin; TBG, serpin, cleaved, mutation, glycoprotein, secreted, signaling protein; 1.50A {Homo sapiens} PDB: 2riw_B* 2xn3_B*
Probab=67.36 E-value=6.1 Score=23.92 Aligned_cols=22 Identities=23% Similarity=0.615 Sum_probs=17.6
Q ss_pred cCCceEEEEEEeCCCCe-EEEEe
Q 030864 127 HLSGYFAFIVYDKSTST-LFVAS 148 (170)
Q Consensus 127 ~L~GmFAFviyD~~~~~-lf~AR 148 (170)
..+--|-|+|+|+.++. ||++|
T Consensus 11 ~~drPFlf~I~~~~t~~iLF~G~ 33 (40)
T 2riv_B 11 QIDRSFMLLILERSTRSILFLGK 33 (40)
T ss_dssp ECCBCEEEEEEETTTTEEEEEEE
T ss_pred EecCCEEEEEEeCCCCcEEEEEE
Confidence 36788999999999885 56665
No 18
>3ndd_B Alpha-1-antitrypsin; serpin, hydrolase inhibitor; 1.50A {Homo sapiens} PDB: 1ezx_B 3ndf_B 7api_B* 8api_B* 9api_B* 2d26_B
Probab=58.68 E-value=12 Score=21.98 Aligned_cols=22 Identities=23% Similarity=0.599 Sum_probs=16.9
Q ss_pred cCCceEEEEEEeCCCCe-EEEEe
Q 030864 127 HLSGYFAFIVYDKSTST-LFVAS 148 (170)
Q Consensus 127 ~L~GmFAFviyD~~~~~-lf~AR 148 (170)
.+|--|-|+|+|+.++. ||++|
T Consensus 7 ~~drPFlf~I~~~~t~~iLF~G~ 29 (36)
T 3ndd_B 7 KFNKPFVFLMIEQNTKSPLFMGK 29 (36)
T ss_dssp ECCSCEEEEEEETTTCCEEEEEE
T ss_pred EeeCCEEEEEEECCCCcEEEEEE
Confidence 35778999999998875 56665
No 19
>3f02_C Neuroserpin; cleaved form, fenib, human, disease MUT glycoprotein, protease inhibitor, secreted, serine protease inhibitor, hydrolase inhibitor; 1.80A {Homo sapiens} PDB: 1jjo_E
Probab=56.71 E-value=12 Score=23.61 Aligned_cols=23 Identities=30% Similarity=0.548 Sum_probs=18.1
Q ss_pred cCCceEEEEEEeCCCCe-EEEEee
Q 030864 127 HLSGYFAFIVYDKSTST-LFVASV 149 (170)
Q Consensus 127 ~L~GmFAFviyD~~~~~-lf~ARD 149 (170)
.++--|-|+|||+.++. +|++|=
T Consensus 9 ~~drPFlf~I~~~~t~~iLF~G~v 32 (48)
T 3f02_C 9 IVDHPFFFLIRNRRTGTILFMGRV 32 (48)
T ss_dssp ECCSCEEEEEEETTTCCEEEEEEE
T ss_pred EeeCCEEEEEEECCCCcEEEEEEe
Confidence 46788999999998875 567663
No 20
>1m93_C Serine proteinase inhibitor 2; serpin, CRMA, apoptosis, ICE inhibitor, viral protein; 1.65A {Cowpox virus} SCOP: e.1.1.1 PDB: 1c8o_B 1f0c_B
Probab=46.81 E-value=22 Score=21.51 Aligned_cols=22 Identities=18% Similarity=0.344 Sum_probs=15.6
Q ss_pred cCCceEEEEEEeCCCCeEEEEe
Q 030864 127 HLSGYFAFIVYDKSTSTLFVAS 148 (170)
Q Consensus 127 ~L~GmFAFviyD~~~~~lf~AR 148 (170)
..+=-|-|.|+|+...-||++|
T Consensus 13 ~~drPFlf~I~~~~~~iLF~G~ 34 (41)
T 1m93_C 13 SADHPFIYVIRHVDGKILFVGR 34 (41)
T ss_dssp ECCSCEEEEEEETTSCEEEEEE
T ss_pred EeeCCEEEEEEECCCCEEEEEE
Confidence 3677899999987633556665
No 21
>4au2_A HSP47, serpin peptidase inhibitor, clade H (heat shock P 47), member 1, (collagen binding...; chaperone-peptide complex; 2.30A {Canis lupus familiaris} PDB: 4au3_A 4au4_A 4awr_A 4au3_B
Probab=40.54 E-value=24 Score=30.25 Aligned_cols=28 Identities=21% Similarity=0.357 Sum_probs=19.4
Q ss_pred cCCceEEEEEEeCCCCe-EEEEe--eCCCCc
Q 030864 127 HLSGYFAFIVYDKSTST-LFVAS--VLAASH 154 (170)
Q Consensus 127 ~L~GmFAFviyD~~~~~-lf~AR--Dr~G~k 154 (170)
..+=-|-|+|+|+.++. ||++| |+-|.|
T Consensus 349 ~~drPFlf~I~d~~t~~iLF~G~v~~P~~~k 379 (392)
T 4au2_A 349 YADHPFIFLVRDTQSGSLLFIGRLVRPKGDK 379 (392)
T ss_dssp ECCSCEEEEEEETTTCCEEEEEEESCCSSCB
T ss_pred EeeCCEEEEEEECCCCcEEEEEEEeCCCCCc
Confidence 36788999999998876 45554 444443
No 22
>2cpd_A Apobec-1 stimulating protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.60 E-value=56 Score=21.48 Aligned_cols=38 Identities=16% Similarity=0.369 Sum_probs=21.1
Q ss_pred CCCCchHHHHHHHHHHhhhcCCCCcccccccCCceEEEEEEeCC
Q 030864 97 AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKS 140 (170)
Q Consensus 97 ~ks~sE~~vii~aY~~~rdrGpyp~~~~l~~L~GmFAFviyD~~ 140 (170)
....+|.+ |-+.+. ..|| +...-++..+| ||||-|+..
T Consensus 24 p~~~t~~~-l~~~F~---~~g~-g~v~~~~~~~g-~afV~f~~~ 61 (99)
T 2cpd_A 24 MLSTSEEM-IEKEFN---NIKP-GAVERVKKIRD-YAFVHFSNR 61 (99)
T ss_dssp CTTCCHHH-HHHHHH---TTST-TCEEEEEECSS-EEEEEESSH
T ss_pred CCCCCHHH-HHHHHH---hcCC-cceEEEEEeCC-eEEEEeCCH
Confidence 33455554 344555 4433 22334555677 999999764
No 23
>1mtp_B Serine proteinase inhibitor (serpin), chain B; structural genomics, protease inhibitor; 1.50A {Thermobifida fusca} SCOP: e.1.1.1
Probab=31.07 E-value=40 Score=20.63 Aligned_cols=21 Identities=24% Similarity=0.433 Sum_probs=13.8
Q ss_pred cCCceEEEEEEeCCCCeEEEEe
Q 030864 127 HLSGYFAFIVYDKSTSTLFVAS 148 (170)
Q Consensus 127 ~L~GmFAFviyD~~~~~lf~AR 148 (170)
..+=-|-|+|+|+ ..-||++|
T Consensus 12 ~~drPFlf~I~~~-~~iLF~G~ 32 (43)
T 1mtp_B 12 SVDRPFHIVVRRR-GAILFLGS 32 (43)
T ss_dssp ECCSCEEEEEEET-TEEEEEEE
T ss_pred EeeCCEEEEEEEC-CEEEEEEE
Confidence 3677899999987 33345444
No 24
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=26.10 E-value=66 Score=21.18 Aligned_cols=41 Identities=10% Similarity=0.163 Sum_probs=21.6
Q ss_pred CCCCCchHHHHHHHHHHhhhcCCCCcccccccCCceEEEEEEeCCC
Q 030864 96 LAKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKST 141 (170)
Q Consensus 96 ~~ks~sE~~vii~aY~~~rdrGpyp~~~~l~~L~GmFAFviyD~~~ 141 (170)
++.+.+|-++ -+.+. ..|+--.-.++.+-+| ||||-|+...
T Consensus 19 Lp~~~te~~L-~~~F~---~~G~i~~v~i~~~srG-faFV~F~~~~ 59 (89)
T 3d2w_A 19 CTEDMTAEEL-QQFFC---QYGEVVDVFIPKPFRA-FAFVTFADDK 59 (89)
T ss_dssp CCTTCCHHHH-HHHHT---TTSCEEEEECCSSCCS-EEEEEESCHH
T ss_pred CCCCCCHHHH-HHHHh---ccCCEEEEEEeeCCCC-EEEEEECCHH
Confidence 4455666643 34444 4553111123334355 9999998654
No 25
>1m40_A TEM-1, beta-lactamase TEM; acylation mechanism, ultra- high resolution, hydrolase; HET: CB4; 0.85A {Escherichia coli} SCOP: e.3.1.1 PDB: 1jwp_A* 1nxy_A* 1ny0_A* 1nym_A* 1nyy_A* 1pzo_A* 1erm_A* 1ero_A* 1erq_A* 1s0w_A 1xpb_A 1li0_A 1htz_A 1jtd_A 1esu_A 1jwz_A* 1li9_A 1jwv_A* 1jtg_A 1axb_A* ...
Probab=25.63 E-value=42 Score=25.96 Aligned_cols=34 Identities=9% Similarity=0.133 Sum_probs=27.1
Q ss_pred cccccCCceEEEEEEeCCCCeEEEEeeCCCCcce
Q 030864 123 HVVGHLSGYFAFIVYDKSTSTLFVASVLAASHLL 156 (170)
Q Consensus 123 ~~l~~L~GmFAFviyD~~~~~lf~ARDr~G~kPL 156 (170)
+.++...|..++++.|.++++++.+.+.+..-|.
T Consensus 10 ~~~~~~~~~~~~~v~d~~tG~~l~~~~~~~~~~~ 43 (263)
T 1m40_A 10 DAEDQLGARVGYIELDLNSGKILESFRPEERFPM 43 (263)
T ss_dssp HHHHHHTSEEEEEEEETTTCCEEEEESTTSCEEC
T ss_pred HHHHhcCCeEEEEEEECCCCCEeeeeCCCCcccc
Confidence 4666778999999999999999987777665443
No 26
>2pef_A Serine protease inhibitor; serpin; 1.60A {Thermoanaerobacter tengcongensis} PDB: 2vh4_A 2pee_A
Probab=25.58 E-value=51 Score=27.91 Aligned_cols=21 Identities=33% Similarity=0.640 Sum_probs=15.4
Q ss_pred CCceEEEEEEeCCCCe-EEEEe
Q 030864 128 LSGYFAFIVYDKSTST-LFVAS 148 (170)
Q Consensus 128 L~GmFAFviyD~~~~~-lf~AR 148 (170)
.+=-|.|+|+|+.++. ||++|
T Consensus 347 ~drPFlf~I~~~~t~~iLF~G~ 368 (373)
T 2pef_A 347 LNRPFIFAIIDNSTNLPIFIGT 368 (373)
T ss_dssp EEEEEEEEEEETTTTEEEEEEE
T ss_pred ecCCEEEEEEECCCCcEEEEEE
Confidence 5667889999888876 55554
No 27
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=25.51 E-value=64 Score=21.41 Aligned_cols=36 Identities=28% Similarity=0.420 Sum_probs=20.3
Q ss_pred CCCCchHHHHHHHHHHhhhcCCCCcccccccCCceEEEEEEeCC
Q 030864 97 AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKS 140 (170)
Q Consensus 97 ~ks~sE~~vii~aY~~~rdrGpyp~~~~l~~L~GmFAFviyD~~ 140 (170)
..+.+|-+ |.+.+.. .|+ -.-++..+| ||||-|+..
T Consensus 20 ~~~~t~~~-l~~~F~~---~G~---i~~v~~~~~-~afV~f~~~ 55 (103)
T 2dgu_A 20 ANTVTEEI-LEKAFSQ---FGK---LERVKKLKD-YAFIHFDER 55 (103)
T ss_dssp CTTCCHHH-HHHHHHH---HSC---EEEEEECSS-CEEEEESSH
T ss_pred CCCCCHHH-HHHHHHh---cCC---EEEEEEECC-EEEEEeCCH
Confidence 33455554 3455554 453 334455566 999999764
No 28
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.94 E-value=98 Score=19.94 Aligned_cols=35 Identities=9% Similarity=0.272 Sum_probs=19.9
Q ss_pred CCCchHHHHHHHHHHhhhcCCCCcccccccCCceEEEEEEeCC
Q 030864 98 KSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKS 140 (170)
Q Consensus 98 ks~sE~~vii~aY~~~rdrGpyp~~~~l~~L~GmFAFviyD~~ 140 (170)
.+.+|-+ |-+.+. ..|+ -.-++-.+| ||||-|+..
T Consensus 20 ~~~t~~~-l~~~F~---~~G~---v~~v~~~~~-~afV~f~~~ 54 (92)
T 2dgt_A 20 PTCTNQE-LRAKFE---EYGP---VIECDIVKD-YAFVHMERA 54 (92)
T ss_dssp SSCCHHH-HHHHHH---TTSC---CCEEEECSS-EEEEEESCH
T ss_pred CCCCHHH-HHHHHH---hcCC---eEEEEEECC-EEEEEECCH
Confidence 3445554 344555 4453 334445566 999999763
No 29
>4dy0_A GLIA-derived nexin; serpin, protease inhibitor, thrombin, cell surface, hydrolas inhibitor; HET: IDS SGN; 2.35A {Homo sapiens} PDB: 4dy7_C
Probab=23.51 E-value=59 Score=27.59 Aligned_cols=22 Identities=18% Similarity=0.415 Sum_probs=17.1
Q ss_pred cCCceEEEEEEeCCCCeE-EEEe
Q 030864 127 HLSGYFAFIVYDKSTSTL-FVAS 148 (170)
Q Consensus 127 ~L~GmFAFviyD~~~~~l-f~AR 148 (170)
..+=-|.|+|+|+.++.+ |++|
T Consensus 353 ~~drPFlf~I~d~~t~~iLF~G~ 375 (379)
T 4dy0_A 353 IVDRPFLFFIRHNPTGAVLFMGQ 375 (379)
T ss_dssp ECCSCEEEEEEETTTTEEEEEEE
T ss_pred EecCCEEEEEEECCCCCEEEEEE
Confidence 378899999999999874 4443
No 30
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=23.23 E-value=35 Score=23.30 Aligned_cols=19 Identities=21% Similarity=0.389 Sum_probs=15.1
Q ss_pred ecccCcEEEEEceeecCHH
Q 030864 70 FAVKDEIFCLFEGALDNLG 88 (170)
Q Consensus 70 f~~~~~i~~vFNGEIyN~~ 88 (170)
|...++.++.|||.||+..
T Consensus 21 ~k~d~~~Yan~egC~Y~at 39 (65)
T 2x9a_A 21 WKEGDSRYANFENCIYELS 39 (65)
T ss_dssp EEETTEEEEEETTEEEEEE
T ss_pred eecCCceEEEecCeEEEee
Confidence 3356789999999999853
No 31
>3dy0_B C-terminus plasma serine protease inhibitor; serpin, blood clotting, hydrolase inhibitor; HET: IDS SGN; 1.55A {Homo sapiens} PDB: 1lq8_B*
Probab=23.03 E-value=81 Score=17.49 Aligned_cols=19 Identities=21% Similarity=0.499 Sum_probs=13.8
Q ss_pred CCceEEEEEEeCCCCeEEEEe
Q 030864 128 LSGYFAFIVYDKSTSTLFVAS 148 (170)
Q Consensus 128 L~GmFAFviyD~~~~~lf~AR 148 (170)
++--|-|.|+|+ .-+|++|
T Consensus 7 ~drPFlf~I~~~--~iLF~G~ 25 (29)
T 3dy0_B 7 FNRPFLMFIVDN--NILFLGK 25 (29)
T ss_dssp CCSCEEEEEESS--SEEEEEE
T ss_pred ecCCEEEEEEcC--ceEEEEE
Confidence 566789999987 5566655
No 32
>3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens}
Probab=22.76 E-value=29 Score=24.12 Aligned_cols=22 Identities=18% Similarity=0.277 Sum_probs=18.6
Q ss_pred ccCcEEEEEceeecCHHHHHHH
Q 030864 72 VKDEIFCLFEGALDNLGSLRQQ 93 (170)
Q Consensus 72 ~~~~i~~vFNGEIyN~~eLr~~ 93 (170)
..++.+++++|.+||......+
T Consensus 18 ~~~~~wv~i~g~VYDvT~f~~~ 39 (88)
T 3lf5_A 18 KKDDCWICIRGFVYNVSPYMEY 39 (88)
T ss_dssp ETTEEEEEETTEEEECGGGTTT
T ss_pred CCCCEEEEECCEEEECccchhh
Confidence 4578999999999999987654
No 33
>1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum}
Probab=22.48 E-value=30 Score=23.49 Aligned_cols=22 Identities=9% Similarity=0.616 Sum_probs=18.4
Q ss_pred ccCcEEEEEceeecCHHHHHHH
Q 030864 72 VKDEIFCLFEGALDNLGSLRQQ 93 (170)
Q Consensus 72 ~~~~i~~vFNGEIyN~~eLr~~ 93 (170)
..++.+++.+|.+||......+
T Consensus 16 ~~~~~wv~i~g~VYDvT~f~~~ 37 (82)
T 1x3x_A 16 TQNDLWIIYDGEVHDMTSFYKE 37 (82)
T ss_dssp ETTEEEEEETTEEEECGGGGGG
T ss_pred CCCCEEEEECCEEEECCcchhh
Confidence 4578999999999999887654
No 34
>2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica}
Probab=22.10 E-value=30 Score=23.75 Aligned_cols=22 Identities=9% Similarity=0.283 Sum_probs=18.3
Q ss_pred ccCcEEEEEceeecCHHHHHHH
Q 030864 72 VKDEIFCLFEGALDNLGSLRQQ 93 (170)
Q Consensus 72 ~~~~i~~vFNGEIyN~~eLr~~ 93 (170)
..++++++.+|.+||+.....+
T Consensus 19 ~~~~~wv~i~g~VYDvT~f~~~ 40 (88)
T 2ibj_A 19 TKDKNWFIIHNNVYDVTAFLNE 40 (88)
T ss_dssp ETTEEEEEETTEEEECGGGTTT
T ss_pred CCCCEEEEECCEEEECCcchhh
Confidence 4578999999999999887553
No 35
>2p74_A Beta-lactamase CTX-M-9A; ultra-high resolution, acylation, ESBL, hydrolase; HET: PO4; 0.88A {Escherichia coli} PDB: 3g2y_A* 4dds_A* 4ddy_A* 4de0_A* 4de1_A* 4de2_A* 4de3_A* 1ylj_A* 1yly_A* 1ym1_A* 1yms_A* 1ymx_A* 3g2z_A* 3g30_A* 3g31_A* 3g32_A* 3g34_A* 3g35_A* 1ylt_A* 1ylz_A* ...
Probab=22.10 E-value=52 Score=25.27 Aligned_cols=32 Identities=9% Similarity=-0.006 Sum_probs=24.8
Q ss_pred cccccCCceEEEEEEeCCCCeEEEEeeCCCCcc
Q 030864 123 HVVGHLSGYFAFIVYDKSTSTLFVASVLAASHL 155 (170)
Q Consensus 123 ~~l~~L~GmFAFviyD~~~~~lf~ARDr~G~kP 155 (170)
++++...|..++++.|.++++++ +.+.+..-|
T Consensus 11 ~~~~~~~~~~~~~v~d~~tG~~l-~~~~~~~~~ 42 (263)
T 2p74_A 11 ALEKSSGGRLGVALIDTADNTQV-LYRGDERFP 42 (263)
T ss_dssp HHHHHHTSEEEEEEEETTTTEEE-EESTTSCEE
T ss_pred HHHHhcCCcEEEEEEECCCCCeE-eeCCCCccc
Confidence 46666788999999999999998 666655444
No 36
>3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} SCOP: d.120.1.1 PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A*
Probab=21.87 E-value=31 Score=24.17 Aligned_cols=22 Identities=9% Similarity=0.289 Sum_probs=18.4
Q ss_pred ccCcEEEEEceeecCHHHHHHH
Q 030864 72 VKDEIFCLFEGALDNLGSLRQQ 93 (170)
Q Consensus 72 ~~~~i~~vFNGEIyN~~eLr~~ 93 (170)
..++.+++.+|.+||.......
T Consensus 22 ~~~~~wv~i~g~VYDvT~f~~~ 43 (92)
T 3ner_A 22 SLKELWLVIHGRVYDVTRFLNE 43 (92)
T ss_dssp ETTEEEEEETTEEEECGGGTTT
T ss_pred CCCCEEEEECCEEEEccccccc
Confidence 4578999999999999987543
No 37
>1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A*
Probab=21.44 E-value=44 Score=23.94 Aligned_cols=22 Identities=5% Similarity=0.128 Sum_probs=18.3
Q ss_pred ccCcEEEEEceeecCHHHHHHH
Q 030864 72 VKDEIFCLFEGALDNLGSLRQQ 93 (170)
Q Consensus 72 ~~~~i~~vFNGEIyN~~eLr~~ 93 (170)
..++.+++.+|.+||......+
T Consensus 21 ~~~~~wv~i~g~VYDvT~f~~~ 42 (104)
T 1hko_A 21 NSKSTWLILHYKVYDLTKFLEE 42 (104)
T ss_dssp SSSSBEEEETTEEEEHHHHSSS
T ss_pred CCCCEEEEECCEEEECCcchhh
Confidence 4578999999999999987553
No 38
>1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ...
Probab=21.26 E-value=32 Score=24.01 Aligned_cols=22 Identities=5% Similarity=0.128 Sum_probs=18.1
Q ss_pred ccCcEEEEEceeecCHHHHHHH
Q 030864 72 VKDEIFCLFEGALDNLGSLRQQ 93 (170)
Q Consensus 72 ~~~~i~~vFNGEIyN~~eLr~~ 93 (170)
..++.+++.+|.+||......+
T Consensus 17 ~~~~~wv~i~g~VYDvT~f~~~ 38 (93)
T 1cyo_A 17 NSKSTWLILHYKVYDLTKFLEE 38 (93)
T ss_dssp ETTEEEEEETTEEEECTTTTTT
T ss_pred CCCCEEEEECCEEEECCCcchh
Confidence 4578999999999999876543
No 39
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=21.00 E-value=61 Score=22.73 Aligned_cols=21 Identities=24% Similarity=0.123 Sum_probs=18.8
Q ss_pred CCCeEEEEeeCCCCcceeeEE
Q 030864 140 STSTLFVASVLAASHLLLSLK 160 (170)
Q Consensus 140 ~~~~lf~ARDr~G~kPLY~~~ 160 (170)
.++-+|++.|+-|+|-.||++
T Consensus 54 ~~~lIfvG~DSKgrkQYFYGk 74 (77)
T 1vcc_A 54 LTRLIFVGSDSKGRRQYFYGK 74 (77)
T ss_dssp TTSEEEEEECTTSCEEEEECT
T ss_pred hCceEEEeecCCCceeeeecc
Confidence 478899999999999999875
No 40
>1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1
Probab=20.61 E-value=34 Score=23.65 Aligned_cols=22 Identities=14% Similarity=0.256 Sum_probs=18.5
Q ss_pred ccCcEEEEEceeecCHHHHHHH
Q 030864 72 VKDEIFCLFEGALDNLGSLRQQ 93 (170)
Q Consensus 72 ~~~~i~~vFNGEIyN~~eLr~~ 93 (170)
..++.+++.+|.+||+....++
T Consensus 20 ~~~~~wv~i~g~VYDvT~f~~~ 41 (90)
T 1cxy_A 20 SPDDCWMAIHGKVYDLTPYVPN 41 (90)
T ss_dssp ETTEEEEEETTEEEECTTTGGG
T ss_pred CCCCEEEEECCEEEECccchhh
Confidence 4578999999999999887654
No 41
>2ivf_C Ethylbenzene dehydrogenase gamma-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=20.51 E-value=39 Score=27.48 Aligned_cols=19 Identities=16% Similarity=0.247 Sum_probs=14.9
Q ss_pred eEEEEEEeCCCCeEEEEeeCCCCcc
Q 030864 131 YFAFIVYDKSTSTLFVASVLAASHL 155 (170)
Q Consensus 131 mFAFviyD~~~~~lf~ARDr~G~kP 155 (170)
.|||++||-+..+ |.|.|-
T Consensus 184 ~vafAvWdG~~~e------r~g~Ks 202 (214)
T 2ivf_C 184 KIAFAVWSGGNAE------RSGRKS 202 (214)
T ss_dssp EEEEEEECGGGTC------CTTCSE
T ss_pred EEEEEEEcCCCcc------cCCccc
Confidence 5999999987764 777774
Done!