Query 030871
Match_columns 170
No_of_seqs 106 out of 1328
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 05:50:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030871.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030871hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02395 glutathione S-transfe 100.0 3.7E-32 8E-37 189.4 18.4 167 1-168 47-214 (215)
2 PLN02473 glutathione S-transfe 100.0 1.4E-31 3E-36 186.4 17.9 166 1-167 48-214 (214)
3 PRK09481 sspA stringent starva 100.0 2.5E-30 5.4E-35 179.6 16.5 150 1-164 53-202 (211)
4 PRK10542 glutathionine S-trans 100.0 3E-29 6.5E-34 173.0 15.0 152 1-166 46-199 (201)
5 TIGR01262 maiA maleylacetoacet 100.0 4.1E-28 8.9E-33 168.4 16.5 159 1-166 46-206 (210)
6 PRK13972 GSH-dependent disulfi 100.0 1.7E-28 3.8E-33 170.9 14.2 155 1-166 46-207 (215)
7 PRK15113 glutathione S-transfe 100.0 2.8E-28 6E-33 169.7 14.4 160 1-170 53-214 (214)
8 PRK11752 putative S-transferas 100.0 6.7E-27 1.5E-31 167.1 17.2 157 1-166 95-260 (264)
9 COG0625 Gst Glutathione S-tran 100.0 1.1E-26 2.4E-31 161.4 16.5 151 1-159 45-199 (211)
10 PRK10357 putative glutathione 100.0 1.4E-26 3.1E-31 159.8 15.9 154 1-162 43-198 (202)
11 PTZ00057 glutathione s-transfe 99.9 1.3E-26 2.7E-31 160.4 14.4 147 1-166 53-201 (205)
12 KOG0406 Glutathione S-transfer 99.9 1.7E-26 3.6E-31 157.9 13.8 152 2-164 53-211 (231)
13 KOG0867 Glutathione S-transfer 99.9 8E-27 1.7E-31 163.0 12.5 159 1-164 48-209 (226)
14 KOG1695 Glutathione S-transfer 99.9 1.5E-24 3.2E-29 147.4 14.1 153 2-166 47-202 (206)
15 TIGR00862 O-ClC intracellular 99.9 1.7E-24 3.7E-29 151.2 14.2 143 1-162 53-218 (236)
16 PLN02378 glutathione S-transfe 99.9 3.7E-25 8E-30 153.8 8.7 141 1-165 54-200 (213)
17 PLN02817 glutathione dehydroge 99.9 2.7E-23 5.9E-28 148.1 12.7 140 1-164 107-251 (265)
18 KOG0868 Glutathione S-transfer 99.9 1.1E-22 2.4E-27 131.9 13.4 152 1-162 52-205 (217)
19 PRK10387 glutaredoxin 2; Provi 99.9 7.4E-24 1.6E-28 147.1 8.3 148 1-158 42-207 (210)
20 PLN02907 glutamate-tRNA ligase 99.9 2.3E-21 4.9E-26 153.6 13.7 131 2-163 33-171 (722)
21 TIGR02182 GRXB Glutaredoxin, G 99.9 8.9E-22 1.9E-26 136.5 9.3 147 1-158 41-206 (209)
22 KOG4420 Uncharacterized conser 99.8 1.5E-19 3.2E-24 124.0 10.5 163 1-164 72-287 (325)
23 cd03187 GST_C_Phi GST_C family 99.8 1.4E-18 3.1E-23 110.0 11.1 117 45-162 2-118 (118)
24 cd03196 GST_C_5 GST_C family, 99.8 4.7E-18 1E-22 107.1 8.4 111 42-161 3-114 (115)
25 cd03188 GST_C_Beta GST_C famil 99.7 1.2E-17 2.5E-22 105.1 7.9 113 45-162 2-114 (114)
26 cd03178 GST_C_Ure2p_like GST_C 99.7 2E-17 4.3E-22 104.0 8.9 112 45-162 1-112 (113)
27 cd03186 GST_C_SspA GST_N famil 99.7 6.7E-17 1.4E-21 100.6 10.2 105 44-161 2-106 (107)
28 cd03190 GST_C_ECM4_like GST_C 99.7 5.7E-17 1.2E-21 105.8 9.8 110 44-164 3-118 (142)
29 cd03183 GST_C_Theta GST_C fami 99.7 1.2E-16 2.7E-21 102.3 11.1 118 46-165 2-123 (126)
30 KOG4244 Failed axon connection 99.7 2.7E-16 6E-21 108.5 12.2 149 2-155 89-273 (281)
31 cd03189 GST_C_GTT1_like GST_C 99.7 3.1E-16 6.7E-21 99.4 11.1 114 40-156 2-119 (119)
32 cd03185 GST_C_Tau GST_C family 99.7 1.5E-16 3.3E-21 101.8 9.3 109 44-164 2-115 (126)
33 cd03181 GST_C_EFB1gamma GST_C 99.7 1.9E-16 4.1E-21 100.9 8.8 117 46-167 2-119 (123)
34 cd03180 GST_C_2 GST_C family, 99.7 6.9E-16 1.5E-20 96.4 11.0 109 45-158 2-110 (110)
35 cd03182 GST_C_GTT2_like GST_C 99.7 5.9E-16 1.3E-20 97.8 10.7 115 42-158 1-117 (117)
36 cd03209 GST_C_Mu GST_C family, 99.7 8.4E-16 1.8E-20 97.7 11.0 112 45-168 2-113 (121)
37 cd03191 GST_C_Zeta GST_C famil 99.7 5.7E-16 1.2E-20 98.5 9.8 115 44-163 2-118 (121)
38 cd03177 GST_C_Delta_Epsilon GS 99.7 1.1E-15 2.3E-20 96.8 10.0 109 45-162 2-110 (118)
39 cd03208 GST_C_Alpha GST_C fami 99.7 1.6E-15 3.4E-20 98.4 10.3 114 45-167 3-118 (137)
40 cd03210 GST_C_Pi GST_C family, 99.6 3.3E-15 7.1E-20 95.7 10.9 82 84-167 31-115 (126)
41 cd03184 GST_C_Omega GST_C fami 99.6 7.8E-16 1.7E-20 98.3 7.7 106 45-164 2-113 (124)
42 cd03207 GST_C_8 GST_C family, 99.6 2.3E-15 4.9E-20 93.1 5.8 76 85-164 27-102 (103)
43 COG0435 ECM4 Predicted glutath 99.6 4.8E-15 1.1E-19 102.9 7.4 147 5-164 128-286 (324)
44 KOG3027 Mitochondrial outer me 99.6 3.6E-14 7.8E-19 94.6 11.1 150 1-154 62-247 (257)
45 cd03200 GST_C_JTV1 GST_C famil 99.6 1.3E-14 2.7E-19 88.4 8.3 95 24-154 1-95 (96)
46 cd03198 GST_C_CLIC GST_C famil 99.6 7.1E-15 1.5E-19 94.0 7.4 82 81-163 22-123 (134)
47 PF00043 GST_C: Glutathione S- 99.6 4.8E-15 1E-19 90.2 6.3 74 82-156 22-95 (95)
48 cd03195 GST_C_4 GST_C family, 99.6 1.9E-14 4E-19 90.6 8.7 111 44-164 2-113 (114)
49 KOG1422 Intracellular Cl- chan 99.6 3.1E-14 6.6E-19 95.3 9.4 141 1-162 55-203 (221)
50 PF13410 GST_C_2: Glutathione 99.6 1.2E-14 2.7E-19 83.2 6.1 68 84-151 2-69 (69)
51 cd03179 GST_C_1 GST_C family, 99.6 1.1E-14 2.5E-19 90.1 6.4 104 45-153 2-105 (105)
52 cd03203 GST_C_Lambda GST_C fam 99.6 5.8E-14 1.3E-18 89.1 9.6 103 42-163 1-110 (120)
53 cd03206 GST_C_7 GST_C family, 99.5 2.5E-14 5.4E-19 87.9 7.3 71 85-158 30-100 (100)
54 cd03194 GST_C_3 GST_C family, 99.5 5.4E-14 1.2E-18 88.4 8.5 71 87-163 40-113 (114)
55 cd03204 GST_C_GDAP1 GST_C fami 99.5 3.2E-14 6.9E-19 88.4 7.0 79 80-158 21-111 (111)
56 cd03201 GST_C_DHAR GST_C famil 99.5 6.7E-14 1.5E-18 88.8 4.9 76 87-163 29-109 (121)
57 KOG2903 Predicted glutathione 99.4 1.4E-13 3E-18 95.0 5.1 148 5-164 122-288 (319)
58 cd00299 GST_C_family Glutathio 99.4 2.9E-13 6.3E-18 82.7 5.6 98 50-152 2-100 (100)
59 cd03202 GST_C_etherase_LigE GS 99.4 1.8E-12 3.9E-17 82.7 9.0 68 86-154 56-123 (124)
60 cd03192 GST_C_Sigma_like GST_C 99.4 2.9E-12 6.2E-17 79.2 8.2 101 45-152 2-104 (104)
61 cd03211 GST_C_Metaxin2 GST_C f 99.4 8.9E-13 1.9E-17 84.2 5.5 72 81-153 50-126 (126)
62 PF14497 GST_C_3: Glutathione 99.4 1.9E-12 4.2E-17 79.3 5.7 67 84-154 31-99 (99)
63 cd03193 GST_C_Metaxin GST_C fa 99.3 7.2E-12 1.6E-16 75.1 6.5 65 88-153 19-88 (88)
64 cd03212 GST_C_Metaxin1_3 GST_C 99.2 5.8E-11 1.2E-15 76.9 7.7 72 82-154 58-134 (137)
65 cd03205 GST_C_6 GST_C family, 99.2 1.6E-10 3.6E-15 70.6 7.6 70 79-152 28-98 (98)
66 cd03197 GST_C_mPGES2 GST_C fam 99.2 7.1E-11 1.5E-15 76.4 5.9 67 87-154 78-145 (149)
67 COG2999 GrxB Glutaredoxin 2 [P 99.1 1.8E-10 4E-15 75.4 7.0 144 5-159 46-208 (215)
68 KOG3028 Translocase of outer m 99.1 3.4E-09 7.4E-14 75.5 12.2 150 2-154 45-233 (313)
69 KOG3029 Glutathione S-transfer 99.1 1.1E-09 2.4E-14 76.8 9.0 67 87-154 287-354 (370)
70 PF14834 GST_C_4: Glutathione 99.1 4.1E-09 8.9E-14 64.5 9.9 113 42-164 1-114 (117)
71 cd03061 GST_N_CLIC GST_N famil 98.9 1.7E-09 3.8E-14 64.6 4.0 33 1-33 56-88 (91)
72 cd03046 GST_N_GTT1_like GST_N 98.9 2.1E-09 4.6E-14 62.4 4.2 32 1-32 45-76 (76)
73 cd03080 GST_N_Metaxin_like GST 98.9 2E-09 4.4E-14 62.4 4.1 32 1-32 44-75 (75)
74 PF13417 GST_N_3: Glutathione 98.9 1.8E-09 3.8E-14 62.7 3.5 33 1-33 41-73 (75)
75 cd03050 GST_N_Theta GST_N fami 98.9 2.2E-09 4.8E-14 62.4 3.9 31 1-31 46-76 (76)
76 cd03075 GST_N_Mu GST_N family, 98.9 2.3E-09 5E-14 63.3 3.9 29 3-31 54-82 (82)
77 cd03052 GST_N_GDAP1 GST_N fami 98.9 2.3E-09 5E-14 61.9 3.1 28 1-28 46-73 (73)
78 cd03057 GST_N_Beta GST_N famil 98.8 3.5E-09 7.6E-14 61.7 3.8 32 1-32 45-77 (77)
79 cd03048 GST_N_Ure2p_like GST_N 98.8 4.4E-09 9.6E-14 61.9 4.1 32 1-32 46-80 (81)
80 cd03076 GST_N_Pi GST_N family, 98.8 3.3E-09 7.2E-14 61.2 3.5 29 1-29 44-72 (73)
81 cd03077 GST_N_Alpha GST_N fami 98.8 5.5E-09 1.2E-13 61.2 4.3 30 3-32 48-77 (79)
82 cd03059 GST_N_SspA GST_N famil 98.8 7E-09 1.5E-13 59.7 4.1 31 1-31 43-73 (73)
83 cd03038 GST_N_etherase_LigE GS 98.8 6.2E-09 1.4E-13 61.7 3.5 32 1-32 52-84 (84)
84 cd03053 GST_N_Phi GST_N family 98.8 8.6E-09 1.9E-13 59.9 3.6 30 1-30 47-76 (76)
85 PF13409 GST_N_2: Glutathione 98.8 7.9E-09 1.7E-13 59.1 3.4 30 1-30 40-70 (70)
86 cd03039 GST_N_Sigma_like GST_N 98.7 1E-08 2.2E-13 59.0 3.4 29 1-29 44-72 (72)
87 cd03058 GST_N_Tau GST_N family 98.7 1.3E-08 2.9E-13 58.8 3.8 31 1-31 43-74 (74)
88 cd03047 GST_N_2 GST_N family, 98.7 1.1E-08 2.4E-13 59.0 3.2 28 1-28 46-73 (73)
89 cd03079 GST_N_Metaxin2 GST_N f 98.7 1.5E-08 3.2E-13 58.2 3.5 30 1-30 45-74 (74)
90 cd03045 GST_N_Delta_Epsilon GS 98.7 1.3E-08 2.9E-13 58.7 3.3 29 1-29 46-74 (74)
91 PF02798 GST_N: Glutathione S- 98.7 2.1E-08 4.6E-13 58.3 4.2 29 1-29 46-76 (76)
92 cd03043 GST_N_1 GST_N family, 98.7 2.4E-08 5.1E-13 57.6 3.3 28 1-28 46-73 (73)
93 cd03041 GST_N_2GST_N GST_N fam 98.7 3.4E-08 7.4E-13 57.5 3.8 31 1-31 45-77 (77)
94 cd03044 GST_N_EF1Bgamma GST_N 98.6 3.3E-08 7.1E-13 57.3 3.3 29 1-29 45-74 (75)
95 cd03056 GST_N_4 GST_N family, 98.6 4.6E-08 1E-12 56.2 3.2 28 1-28 46-73 (73)
96 cd03042 GST_N_Zeta GST_N famil 98.6 5.1E-08 1.1E-12 56.1 3.1 28 1-28 46-73 (73)
97 cd03054 GST_N_Metaxin GST_N fa 98.6 8.2E-08 1.8E-12 55.1 3.5 30 1-30 43-72 (72)
98 cd03060 GST_N_Omega_like GST_N 98.5 1.2E-07 2.6E-12 54.3 3.1 27 1-27 43-70 (71)
99 PF04399 Glutaredoxin2_C: Glut 98.5 4.9E-07 1.1E-11 57.7 5.5 68 86-158 57-124 (132)
100 cd03049 GST_N_3 GST_N family, 98.4 1.8E-07 3.9E-12 53.8 2.5 28 1-28 45-73 (73)
101 cd03040 GST_N_mPGES2 GST_N fam 98.4 3.8E-07 8.2E-12 53.0 3.7 31 1-31 42-76 (77)
102 cd03037 GST_N_GRX2 GST_N famil 98.4 2.4E-07 5.1E-12 53.0 2.7 29 1-29 42-71 (71)
103 cd03051 GST_N_GTT2_like GST_N 98.4 2.4E-07 5.2E-12 53.3 2.7 28 1-28 46-74 (74)
104 cd03078 GST_N_Metaxin1_like GS 98.2 2.3E-06 4.9E-11 49.3 3.7 29 2-30 44-72 (73)
105 cd00570 GST_N_family Glutathio 98.2 1.9E-06 4E-11 48.6 3.3 28 1-28 44-71 (71)
106 cd03199 GST_C_GRX2 GST_C famil 98.2 1.4E-05 3.1E-10 50.6 7.5 67 87-158 59-125 (128)
107 KOG1147 Glutamyl-tRNA syntheta 97.8 1.6E-05 3.5E-10 61.1 3.1 119 13-162 44-162 (712)
108 PF10568 Tom37: Outer mitochon 97.4 0.00029 6.3E-09 40.3 3.4 27 1-27 44-71 (72)
109 PF11801 Tom37_C: Tom37 C-term 94.9 0.08 1.7E-06 35.6 5.1 39 93-131 113-155 (168)
110 TIGR02190 GlrX-dom Glutaredoxi 94.4 0.038 8.2E-07 32.0 2.3 27 2-28 53-79 (79)
111 cd03029 GRX_hybridPRX5 Glutare 92.0 0.2 4.2E-06 28.3 2.7 26 3-28 47-72 (72)
112 TIGR02183 GRXA Glutaredoxin, G 87.5 0.91 2E-05 26.7 3.2 28 5-32 56-83 (86)
113 PRK10638 glutaredoxin 3; Provi 86.2 1.1 2.4E-05 25.9 3.0 26 2-27 48-73 (83)
114 PRK11200 grxA glutaredoxin 1; 85.8 1.5 3.2E-05 25.6 3.4 28 5-32 57-84 (85)
115 cd02066 GRX_family Glutaredoxi 83.3 1.5 3.4E-05 23.9 2.7 25 2-26 46-70 (72)
116 TIGR02196 GlrX_YruB Glutaredox 80.4 2.7 5.8E-05 23.1 3.0 26 2-27 46-73 (74)
117 PF09635 MetRS-N: MetRS-N bind 80.4 0.64 1.4E-05 29.3 0.4 29 4-32 33-63 (122)
118 cd02976 NrdH NrdH-redoxin (Nrd 76.7 2.5 5.5E-05 23.1 2.1 19 2-20 46-64 (73)
119 KOG1668 Elongation factor 1 be 75.9 2.7 5.9E-05 29.6 2.4 59 94-159 10-68 (231)
120 PF11732 Thoc2: Transcription- 70.5 8.3 0.00018 22.3 3.2 36 118-154 42-77 (77)
121 TIGR02681 phage_pRha phage reg 68.9 6.5 0.00014 24.4 2.7 26 7-32 2-28 (108)
122 cd03418 GRX_GRXb_1_3_like Glut 64.1 11 0.00024 20.9 3.0 22 6-27 51-72 (75)
123 cd03027 GRX_DEP Glutaredoxin ( 62.7 9.9 0.00021 21.2 2.5 24 2-25 47-70 (73)
124 cd03419 GRX_GRXh_1_2_like Glut 60.0 14 0.00031 20.8 3.0 26 4-29 51-76 (82)
125 TIGR02180 GRX_euk Glutaredoxin 55.9 20 0.00042 20.3 3.1 24 5-28 53-76 (84)
126 TIGR02181 GRX_bact Glutaredoxi 47.9 29 0.00062 19.5 2.9 25 4-28 47-71 (79)
127 PF07862 Nif11: Nitrogen fixat 47.9 27 0.00058 17.9 2.5 22 144-165 5-26 (49)
128 TIGR01764 excise DNA binding d 44.5 40 0.00088 16.5 3.0 25 4-28 24-48 (49)
129 COG0695 GrxC Glutaredoxin and 43.1 46 0.001 19.1 3.2 24 3-26 50-73 (80)
130 PRK10329 glutaredoxin-like pro 39.2 38 0.00082 19.5 2.5 16 3-18 47-62 (81)
131 PF10022 DUF2264: Uncharacteri 34.5 89 0.0019 24.0 4.4 103 8-122 99-206 (361)
132 cd03028 GRX_PICOT_like Glutare 34.0 71 0.0015 18.7 3.1 24 4-27 61-84 (90)
133 PF12622 NpwBP: mRNA biogenesi 33.9 23 0.00051 18.4 0.9 10 1-10 11-20 (48)
134 TIGR02200 GlrX_actino Glutared 32.2 28 0.00061 19.1 1.2 18 3-20 48-66 (77)
135 PF09849 DUF2076: Uncharacteri 31.0 2.1E+02 0.0045 20.8 8.1 67 19-104 5-71 (247)
136 PF12728 HTH_17: Helix-turn-he 30.3 82 0.0018 15.9 3.5 25 5-29 25-49 (51)
137 TIGR03798 ocin_TIGR03798 bacte 29.6 70 0.0015 17.5 2.4 22 143-164 2-23 (64)
138 TIGR02189 GlrX-like_plant Glut 29.2 99 0.0021 18.5 3.2 24 3-26 58-81 (99)
139 COG3646 Uncharacterized phage- 28.9 40 0.00087 22.7 1.5 25 9-33 6-30 (167)
140 PRK15371 effector protein YopJ 27.4 2.6E+02 0.0057 20.8 5.9 45 87-132 22-66 (287)
141 PF00392 GntR: Bacterial regul 26.7 96 0.0021 16.7 2.7 26 96-121 5-31 (64)
142 PF09098 Dehyd-heme_bind: Quin 25.5 50 0.0011 22.2 1.5 15 18-32 54-68 (167)
143 PHA03050 glutaredoxin; Provisi 24.5 1.2E+02 0.0025 18.7 3.0 22 4-25 67-88 (108)
144 PHA00728 hypothetical protein 23.7 2E+02 0.0044 18.2 4.1 10 109-118 65-74 (151)
145 PRK13916 plasmid segregation p 22.3 84 0.0018 18.5 1.9 28 140-167 15-49 (97)
146 PF03421 YopJ: YopJ Serine/Thr 22.2 2.6E+02 0.0057 19.0 4.8 40 91-131 2-41 (177)
147 cd06891 PX_Vps17p The phosphoi 21.3 60 0.0013 21.2 1.3 21 140-160 109-129 (140)
148 TIGR00365 monothiol glutaredox 21.2 1.5E+02 0.0032 17.7 2.9 21 5-25 66-86 (97)
149 TIGR03396 PC_PLC phospholipase 21.0 1.3E+02 0.0028 25.4 3.4 29 4-32 389-425 (690)
150 cd08540 SAM_PNT-ERG Sterile al 20.6 1.6E+02 0.0035 16.9 2.8 23 40-62 2-26 (75)
151 COG5625 Predicted transcriptio 20.4 2.1E+02 0.0046 17.6 3.3 35 72-106 75-109 (113)
152 COG3738 Uncharacterized protei 20.3 1.2E+02 0.0027 20.5 2.6 33 121-154 98-130 (200)
153 PF05278 PEARLI-4: Arabidopsis 20.2 3.7E+02 0.008 19.9 8.0 49 9-57 86-135 (269)
No 1
>PLN02395 glutathione S-transferase
Probab=100.00 E-value=3.7e-32 Score=189.39 Aligned_cols=167 Identities=70% Similarity=1.211 Sum_probs=133.7
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCC
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRP 80 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (170)
+||+|+||+|+++|.+|+||.+|++||+++++..+..++|.++.++++++.|+.+.+..+...+........+....+..
T Consensus 47 ~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (215)
T PLN02395 47 LQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFP 126 (215)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCC
Confidence 59999999999999999999999999999997533458899999999999999998877765544433322222222223
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCcc-ccccccCCccHHHHHHHHhcChhHH
Q 030871 81 VDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMG-RQHMIRDRKHVSAWWDDISNRPSWK 159 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~-~~~~~~~~p~l~~w~~~~~~~p~~~ 159 (170)
...+..+...+.+.+.++.||+.|++++|++|+++|+|||++++++.++..... .... ..+|+|.+|+++|.++|+++
T Consensus 127 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~-~~~p~L~~w~~~~~~rp~~k 205 (215)
T PLN02395 127 ADEKVIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGPIGKAYLI-KDRKHVSAWWDDISSRPAWK 205 (215)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcccchhhhh-ccCchHHHHHHHHHcChHHH
Confidence 334455667888899999999999999999999999999999998877643211 2234 77899999999999999999
Q ss_pred HHHHhcCCC
Q 030871 160 KVLELCKTP 168 (170)
Q Consensus 160 ~~~~~~~~~ 168 (170)
+++++++.|
T Consensus 206 ~~~~~~~~~ 214 (215)
T PLN02395 206 EVLAKYSLP 214 (215)
T ss_pred HHHHHhcCC
Confidence 999998887
No 2
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=1.4e-31 Score=186.38 Aligned_cols=166 Identities=48% Similarity=0.921 Sum_probs=132.2
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCC
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRP 80 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (170)
+||+|+||+|++||.+|+||.+|++||++++++.+.+++|.++.++++++.|..+..+.+.......+....+....+..
T Consensus 48 ~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (214)
T PLN02473 48 RQPFGQVPAIEDGDLKLFESRAIARYYATKYADQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEP 127 (214)
T ss_pred hCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCC
Confidence 59999999999999999999999999999997544468899999999999999988877655433333332332222334
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCcc-ccccccCCccHHHHHHHHhcChhHH
Q 030871 81 VDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMG-RQHMIRDRKHVSAWWDDISNRPSWK 159 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~-~~~~~~~~p~l~~w~~~~~~~p~~~ 159 (170)
......+.....+.+.++.||++|++++|++|+++|+|||++++.+.+...... .... +++|+|.+|+++|.++|+++
T Consensus 128 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~-~~~P~l~~w~~~~~~~p~~~ 206 (214)
T PLN02473 128 CDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLSGLV-TSRENLNRWWNEISARPAWK 206 (214)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccHHHH-hcCHHHHHHHHHHhcChhhH
Confidence 445566667788999999999999988999999999999999999877653322 2245 78999999999999999999
Q ss_pred HHHHhcCC
Q 030871 160 KVLELCKT 167 (170)
Q Consensus 160 ~~~~~~~~ 167 (170)
+++.+..|
T Consensus 207 ~~~~~~~~ 214 (214)
T PLN02473 207 KLMELAAY 214 (214)
T ss_pred HHHHHhcC
Confidence 99987543
No 3
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.97 E-value=2.5e-30 Score=179.65 Aligned_cols=150 Identities=19% Similarity=0.265 Sum_probs=121.4
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCC
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRP 80 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (170)
+||+|+||+|++||.+|+||.+|++||+++++. ..++|.++.++++++.|..++...+....... . .
T Consensus 53 ~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~--~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~------~-----~ 119 (211)
T PRK09481 53 LNPYQSVPTLVDRELTLYESRIIMEYLDERFPH--PPLMPVYPVARGESRLMMHRIEKDWYSLMNKI------V-----N 119 (211)
T ss_pred hCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH------h-----c
Confidence 699999999999999999999999999999974 46889999999999999987765443221111 0 1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhHHH
Q 030871 81 VDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKK 160 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~ 160 (170)
..+...+...+.+.+.|+.+|++|++++|++|+++|+|||++++.+.++......... ..+|+|.+|+++|.++|++++
T Consensus 120 ~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~~~~~~~-~~~p~l~~w~~~~~~rp~~~~ 198 (211)
T PRK09481 120 GSASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVLGIELSG-PGAKELKGYMTRVFERDSFLA 198 (211)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhcCCCCCC-CCChhHHHHHHHHhccHHHHH
Confidence 1234456677788899999999999999999999999999999999887654332222 578999999999999999999
Q ss_pred HHHh
Q 030871 161 VLEL 164 (170)
Q Consensus 161 ~~~~ 164 (170)
++..
T Consensus 199 ~~~~ 202 (211)
T PRK09481 199 SLTE 202 (211)
T ss_pred HcCH
Confidence 8764
No 4
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.97 E-value=3e-29 Score=173.04 Aligned_cols=152 Identities=22% Similarity=0.357 Sum_probs=120.7
Q ss_pred CCCCCCCCeeE-eCCeEEeehHHHHHHHHHHhccCCCCCC-CCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccC
Q 030871 1 MQPFGELPVIQ-DGDFILYESRAIMRYYAEKYRSQGTELL-GKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFG 78 (170)
Q Consensus 1 ~~P~g~vP~l~-~~~~~i~es~~I~~yl~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (170)
+||+|+||+|+ +||.+|+||.+|++||++++++ ..++ |.++.++++++.|+.+..+.+...+... ..
T Consensus 46 ~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~--~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~---------~~ 114 (201)
T PRK10542 46 INPKGQVPALLLDDGTLLTEGVAIMQYLADSVPD--RQLLAPVGSLSRYHTIEWLNYIATELHKGFTPL---------FR 114 (201)
T ss_pred hCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcc--cccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhc---------cC
Confidence 69999999998 5788999999999999999975 3344 6678899999999998876655432211 11
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhH
Q 030871 79 RPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 158 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 158 (170)
....+...+...+.+.+.|+.+|++|++++|++|+++|+|||++++++.+...... .. ..+|+|.+|+++|.++|++
T Consensus 115 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~--~~-~~~p~l~~w~~~~~~~p~~ 191 (201)
T PRK10542 115 PDTPEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAVKL--NL-EGLEHIAAYMQRVAERPAV 191 (201)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhccCC--Cc-ccchHHHHHHHHHHcCHHH
Confidence 11223334556777889999999999999999999999999999999888754432 24 6799999999999999999
Q ss_pred HHHHHhcC
Q 030871 159 KKVLELCK 166 (170)
Q Consensus 159 ~~~~~~~~ 166 (170)
+++++...
T Consensus 192 k~~~~~~~ 199 (201)
T PRK10542 192 AAALKAEG 199 (201)
T ss_pred HHHHHHcc
Confidence 99998743
No 5
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.96 E-value=4.1e-28 Score=168.45 Aligned_cols=159 Identities=19% Similarity=0.213 Sum_probs=122.9
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCC
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRP 80 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (170)
+||+|+||+|++||.+|+||.+|++||++++++ ..++|.++.++++++.|+.+....+.......+.. ......+ .
T Consensus 46 ~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~--~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~ 121 (210)
T TIGR01262 46 LNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPD--PPLLPADPIKRARVRALALLIACDIHPLNNLRVLQ-YLREKLG-V 121 (210)
T ss_pred cCCCCcCCEEEECCEEeecHHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHH-HHHhhcC-C
Confidence 599999999999999999999999999999974 45889999999999999998876665432211111 1111111 1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcC--CCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhH
Q 030871 81 VDEKLVKESDEKLGKTLDVYEERLSK--SKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 158 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~le~~L~~--~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 158 (170)
......+...+.+.+.|+.||++|++ ++|++|+++|+|||++++++.+...... .. ..+|+|.+|+++|.++|++
T Consensus 122 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~~~--~~-~~~p~l~~~~~~~~~rp~~ 198 (210)
T TIGR01262 122 EEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERFGV--DL-TPYPTLRRIAAALAALPAF 198 (210)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHcCC--Cc-ccchHHHHHHHHHhcCHHH
Confidence 12223344566789999999999986 3599999999999999999988653321 24 7899999999999999999
Q ss_pred HHHHHhcC
Q 030871 159 KKVLELCK 166 (170)
Q Consensus 159 ~~~~~~~~ 166 (170)
++++....
T Consensus 199 ~~~~~~~~ 206 (210)
T TIGR01262 199 QRAHPENQ 206 (210)
T ss_pred HHhCcccC
Confidence 99988764
No 6
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.96 E-value=1.7e-28 Score=170.88 Aligned_cols=155 Identities=25% Similarity=0.389 Sum_probs=118.9
Q ss_pred CCCCCCCCeeEe-----CC--eEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHh
Q 030871 1 MQPFGELPVIQD-----GD--FILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLF 73 (170)
Q Consensus 1 ~~P~g~vP~l~~-----~~--~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (170)
+||.|+||+|++ || .+|+||.+|++||+++++ .+.|.++.++++++.|+.|....+...+.... .+
T Consensus 46 iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~~----~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~---~~ 118 (215)
T PRK13972 46 ISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTG----LFLSHETRERAATLQWLFWQVGGLGPMLGQNH---HF 118 (215)
T ss_pred hCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhcC----CCCCCCHHHHHHHHHHHHHHhhccCcceeeee---ee
Confidence 699999999997 45 479999999999999985 26688899999999999998776654321100 00
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHh
Q 030871 74 SSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDIS 153 (170)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~ 153 (170)
.. ......+...+.....+.+.+..||++|++++|++|+++|+|||++++++....... ... .++|+|.+|+++|.
T Consensus 119 ~~-~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~--~~~-~~~P~l~~w~~r~~ 194 (215)
T PRK13972 119 NH-AAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQR--IDL-AMYPAVKNWHERIR 194 (215)
T ss_pred ec-cCCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhcC--Ccc-hhCHHHHHHHHHHH
Confidence 00 011123344566677788999999999999999999999999999988775443222 124 78999999999999
Q ss_pred cChhHHHHHHhcC
Q 030871 154 NRPSWKKVLELCK 166 (170)
Q Consensus 154 ~~p~~~~~~~~~~ 166 (170)
++|++++++.+..
T Consensus 195 ~rp~~~~~~~~~~ 207 (215)
T PRK13972 195 SRPATGQALLKAQ 207 (215)
T ss_pred hCHHHHHHHHHhc
Confidence 9999999987754
No 7
>PRK15113 glutathione S-transferase; Provisional
Probab=99.96 E-value=2.8e-28 Score=169.73 Aligned_cols=160 Identities=20% Similarity=0.216 Sum_probs=122.2
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCC-CCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCC
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQG-TELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGR 79 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (170)
+||+|+||+|++||.+|+||.+|++||++++++.. ..++|.++.+++++++|+.+.+..+.......... .....
T Consensus 53 ~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 128 (214)
T PRK15113 53 YSLTRRVPTLQHDDFELSESSAIAEYLEERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTD----VVFAG 128 (214)
T ss_pred cCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccc----hhccC
Confidence 69999999999999999999999999999997421 13889999999999999999876654322110000 01111
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhH
Q 030871 80 PVDEKLVKESDEKLGKTLDVYEERLSK-SKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 158 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~le~~L~~-~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 158 (170)
...+...+..++.+.+.++.+|++|++ ++|++|+ +|+|||++++.+.++..... .+ .|+|.+|+++|.++|++
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~~~--~~---~p~l~~~~~r~~~rp~~ 202 (214)
T PRK15113 129 AKKAPLSEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLHGD--EV---PERLADYATFQWQRASV 202 (214)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHcCC--CC---CHHHHHHHHHHhcCHHH
Confidence 122233455667788999999999975 4699996 99999999999987754321 12 29999999999999999
Q ss_pred HHHHHhcCCCCC
Q 030871 159 KKVLELCKTPFG 170 (170)
Q Consensus 159 ~~~~~~~~~~~~ 170 (170)
+++++..+-.+|
T Consensus 203 ~~~~~~~~~~~~ 214 (214)
T PRK15113 203 QRWLALSAKRSG 214 (214)
T ss_pred HHHHHHhhhhcC
Confidence 999998876665
No 8
>PRK11752 putative S-transferase; Provisional
Probab=99.95 E-value=6.7e-27 Score=167.14 Aligned_cols=157 Identities=24% Similarity=0.396 Sum_probs=118.5
Q ss_pred CCCCCCCCeeEeC----CeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcc
Q 030871 1 MQPFGELPVIQDG----DFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSK 76 (170)
Q Consensus 1 ~~P~g~vP~l~~~----~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (170)
+||.|+||+|+++ +.+|+||.+|++||++++++ ++|.++.++++++.|+.+...... .....+.. .+.
T Consensus 95 iNP~GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~~~----L~P~~~~era~v~~wl~~~~~~~~-~~~~~~~~-~~~-- 166 (264)
T PRK11752 95 INPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFGA----FLPKDLAARTETLNWLFWQQGSAP-FLGGGFGH-FYA-- 166 (264)
T ss_pred hCCCCCCCEEEeCCCCCCeEEEcHHHHHHHHHHhcCC----cCCCCHHHHHHHHHHHHHHhhhhh-HHHHHHHH-HHH--
Confidence 6999999999975 36899999999999999963 889999999999999998765431 11111111 110
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCc---c-c-cccccCCccHHHHHHH
Q 030871 77 FGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPM---G-R-QHMIRDRKHVSAWWDD 151 (170)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~---~-~-~~~~~~~p~l~~w~~~ 151 (170)
......+...+.....+.+.|+.||++|++++||+|+++|+|||++++++.++.... . . ... ..+|+|.+|+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~-~~~P~L~~w~~r 245 (264)
T PRK11752 167 YAPEKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDV-GSYKHVQRWAKE 245 (264)
T ss_pred hCCccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCc-ccCHHHHHHHHH
Confidence 011122334455667788999999999999999999999999999999887764321 1 1 124 789999999999
Q ss_pred HhcChhHHHHHHhcC
Q 030871 152 ISNRPSWKKVLELCK 166 (170)
Q Consensus 152 ~~~~p~~~~~~~~~~ 166 (170)
|.++|++++++...+
T Consensus 246 v~~rPs~k~~~~~~~ 260 (264)
T PRK11752 246 IAERPAVKRGRIVNR 260 (264)
T ss_pred HHhCHHHHHHHhccc
Confidence 999999999987653
No 9
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.1e-26 Score=161.42 Aligned_cols=151 Identities=29% Similarity=0.482 Sum_probs=123.6
Q ss_pred CCCCCCCCeeEeCCe-EEeehHHHHHHHHHHhccCCCCCCCCCHH---HHHHHHHHHHHHHhhhchHHHHHHHHHHhhcc
Q 030871 1 MQPFGELPVIQDGDF-ILYESRAIMRYYAEKYRSQGTELLGKTIE---ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSK 76 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~-~i~es~~I~~yl~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (170)
+||.|+||+|+++|. +|+||.+|++||+++|+. ..++|.++. +++++..|..+....+.+.+....... ....
T Consensus 45 ~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~--~~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 121 (211)
T COG0625 45 LNPLGKVPALVDDDGEVLTESGAILEYLAERYPG--PPLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRAL-LGSE 121 (211)
T ss_pred cCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCC--CCcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhh-cccc
Confidence 699999999998776 899999999999999984 228898775 788888999999888887766655443 2221
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcCh
Q 030871 77 FGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRP 156 (170)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 156 (170)
... .....+...+.+...+..+|..|++++|++|+++|+|||++++.+.++..... .. ..+|++.+|++++.++|
T Consensus 122 ~~~--~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~~~--~~-~~~p~l~~w~~r~~~rp 196 (211)
T COG0625 122 PEL--LEAALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALLGE--EL-ADYPALKAWYERVLARP 196 (211)
T ss_pred ccc--cHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhcCc--cc-ccChHHHHHHHHHHcCC
Confidence 111 56777888999999999999999999999999999999999999998554332 22 67999999999999999
Q ss_pred hHH
Q 030871 157 SWK 159 (170)
Q Consensus 157 ~~~ 159 (170)
+++
T Consensus 197 ~~~ 199 (211)
T COG0625 197 AFR 199 (211)
T ss_pred chh
Confidence 954
No 10
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.95 E-value=1.4e-26 Score=159.84 Aligned_cols=154 Identities=18% Similarity=0.177 Sum_probs=119.1
Q ss_pred CCCCCCCCeeE-eCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCC
Q 030871 1 MQPFGELPVIQ-DGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGR 79 (170)
Q Consensus 1 ~~P~g~vP~l~-~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (170)
+||+|+||+|+ ++|.+|+||.+|++||++++++ ..++|.++.++++++.|..+.++.+..... ....... .+.
T Consensus 43 ~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~--~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~ 116 (202)
T PRK10357 43 YNPLGKVPALVTEEGECWFDSPIIAEYIELLNVA--PAMLPRDPLAALRVRQLEALADGIMDAALV-SVREQAR---PAA 116 (202)
T ss_pred cCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhC---ccc
Confidence 58999999998 6788999999999999999863 458999999999999998887665544322 2221111 112
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCcc-ccccccCCccHHHHHHHHhcChhH
Q 030871 80 PVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMG-RQHMIRDRKHVSAWWDDISNRPSW 158 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~-~~~~~~~~p~l~~w~~~~~~~p~~ 158 (170)
.......+.....+.+.|+.||++|++++ ++|+++|+|||++++.+.++..... ..+. ..+|++.+|+++|.++|++
T Consensus 117 ~~~~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~~~~~~~-~~~p~l~~~~~~i~~rp~~ 194 (202)
T PRK10357 117 QQSEDELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVAPGWC-VDRPHLVKLVENLFQRESF 194 (202)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcccCcchh-hcChHHHHHHHHHhcChhh
Confidence 22334556677889999999999998878 9999999999999999887644221 1234 6789999999999999999
Q ss_pred HHHH
Q 030871 159 KKVL 162 (170)
Q Consensus 159 ~~~~ 162 (170)
+++.
T Consensus 195 ~~~~ 198 (202)
T PRK10357 195 ARTE 198 (202)
T ss_pred hhcC
Confidence 9863
No 11
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.95 E-value=1.3e-26 Score=160.39 Aligned_cols=147 Identities=22% Similarity=0.299 Sum_probs=105.8
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCC
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRP 80 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (170)
+||+|+||+|++||.+|+||.+|++||+++++. .+.+..++..++.......+ +...+. .....
T Consensus 53 ~nP~g~vP~L~~~~~~l~eS~AI~~YLa~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~------- 116 (205)
T PTZ00057 53 DTPFEQVPILEMDNIIFAQSQAIVRYLSKKYKI-----CGESELNEFYADMIFCGVQD-IHYKFN---NTNLF------- 116 (205)
T ss_pred CCCCCCCCEEEECCEEEecHHHHHHHHHHHcCC-----CCCCHHHHHHHHHHHHHHHH-HHHHHh---hhHHH-------
Confidence 489999999999999999999999999999962 34444444344333222211 111110 00000
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCC--CcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhH
Q 030871 81 VDEKLVKESDEKLGKTLDVYEERLSKS--KYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 158 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~le~~L~~~--~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 158 (170)
.+...+...+.+++.+..||++|+++ +|++|+++|+||+++++++.++.... ...+ ..+|+|.+|+++|.++|++
T Consensus 117 -~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~~-~~~l-~~~P~l~~~~~r~~~~P~~ 193 (205)
T PTZ00057 117 -KQNETTFLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETKY-PNSL-KNFPLLKAHNEFISNLPNI 193 (205)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHhC-hhhh-ccChhHHHHHHHHHhChHH
Confidence 11222445677899999999999754 79999999999999999988765322 2346 8899999999999999999
Q ss_pred HHHHHhcC
Q 030871 159 KKVLELCK 166 (170)
Q Consensus 159 ~~~~~~~~ 166 (170)
++++++..
T Consensus 194 k~y~~~~~ 201 (205)
T PTZ00057 194 KNYISNRK 201 (205)
T ss_pred HHHHHhCC
Confidence 99998754
No 12
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.7e-26 Score=157.94 Aligned_cols=152 Identities=18% Similarity=0.256 Sum_probs=125.1
Q ss_pred C-CCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCC
Q 030871 2 Q-PFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRP 80 (170)
Q Consensus 2 ~-P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (170)
| |.++||||++||..|+||..|++||.+.+++ +++++|+|+.+|++++.|+++++........... ..
T Consensus 53 np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~-~~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~----------~~ 121 (231)
T KOG0406|consen 53 NPVHKKVPVLEHNGKPICESLIIVEYIDETWPS-GPPILPSDPYERAQARFWAEYIDKKVFFVGRFVV----------AA 121 (231)
T ss_pred ccccccCCEEEECCceehhhHHHHHHHHhhccC-CCCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHH----------hh
Confidence 6 8899999999999999999999999999996 6789999999999999999999986654433321 11
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhc-CCCcccCCCccHhhhhhhhhHhhhcCCcc-----ccccccCCccHHHHHHHHhc
Q 030871 81 VDEKLVKESDEKLGKTLDVYEERLS-KSKYLAGDFFSLADLSHIPFTHYLVGPMG-----RQHMIRDRKHVSAWWDDISN 154 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~le~~L~-~~~fl~G~~~t~aDi~l~~~l~~~~~~~~-----~~~~~~~~p~l~~w~~~~~~ 154 (170)
...+..+.+.+.+.+.|..||+.|. +++|+.|++++++|+++++++.++..... ....++++|+|.+|.++|.+
T Consensus 122 ~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~ 201 (231)
T KOG0406|consen 122 KGGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKE 201 (231)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhc
Confidence 3335567778888999999999999 88999999999999999976666543321 22334899999999999999
Q ss_pred ChhHHHHHHh
Q 030871 155 RPSWKKVLEL 164 (170)
Q Consensus 155 ~p~~~~~~~~ 164 (170)
+|++++++..
T Consensus 202 ~~~V~~~~p~ 211 (231)
T KOG0406|consen 202 DEAVKAVLPD 211 (231)
T ss_pred ChhHHhhcCC
Confidence 9999987643
No 13
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=8e-27 Score=163.00 Aligned_cols=159 Identities=35% Similarity=0.609 Sum_probs=134.4
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCC-CCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhc-ccC
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTE-LLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSS-KFG 78 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 78 (170)
+||+|+||+|+|+|..+.||.+|+.||.++|+ .... ++|.+...++.+++|+.+..+.+..... ....+.+ ..+
T Consensus 48 ~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~-~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~---~~~~~~p~~~~ 123 (226)
T KOG0867|consen 48 LNPLGKVPALEDGGLTLWESHAILRYLAEKYG-PLGGILLPKDLKERAIVDQWLEFENGVLDPVTF---ERPILAPLLVG 123 (226)
T ss_pred cCcCCCCCeEecCCeEEeeHHHHHHHHHHHcC-CCCcccCCcCHHHHHHHHHHHHhhhcccccccc---cceeeecceec
Confidence 69999999999999999999999999999998 4334 9999999999999999998888877543 2222333 455
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhc-CCccccccccCCccHHHHHHHHhcChh
Q 030871 79 RPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLV-GPMGRQHMIRDRKHVSAWWDDISNRPS 157 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~-~~~~~~~~~~~~p~l~~w~~~~~~~p~ 157 (170)
........+.....+.+.++.+|.+|.++.|+.|+++|+||+.+.+.+..+. ........ .++|++.+|++++.++|+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~~~~~~~~-~~~p~v~~W~~~~~~~P~ 202 (226)
T KOG0867|consen 124 LPLNPTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGKFATEKDF-EKYPKVARWYERIQKRPA 202 (226)
T ss_pred ccCcchhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHhhhhhhhh-hhChHHHHHHHHHHhCcc
Confidence 6667788899999999999999999999999999999999999999998884 21223345 899999999999999999
Q ss_pred HHHHHHh
Q 030871 158 WKKVLEL 164 (170)
Q Consensus 158 ~~~~~~~ 164 (170)
+++....
T Consensus 203 ~~e~~~~ 209 (226)
T KOG0867|consen 203 YEEANEK 209 (226)
T ss_pred HHHHHHH
Confidence 9997754
No 14
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=1.5e-24 Score=147.43 Aligned_cols=153 Identities=27% Similarity=0.305 Sum_probs=120.0
Q ss_pred CCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCC
Q 030871 2 QPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPV 81 (170)
Q Consensus 2 ~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (170)
.|+|++|+|..||..|.+|.||++||+++|+ +.|+++.+.++++.+++.+.+.....+...... ... ..
T Consensus 47 ~pfgqlP~l~vDg~~i~QS~AI~RyLArk~g-----l~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~----~~~--g~ 115 (206)
T KOG1695|consen 47 MPFGQLPVLEVDGKKLVQSRAILRYLARKFG-----LAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTA----PEA--GK 115 (206)
T ss_pred CCCCCCCEEeECCEeeccHHHHHHHHHHHhC-----cCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhh----hhh--cc
Confidence 4999999999999999999999999999997 889999999999999987776655433322211 111 11
Q ss_pred CHHHHH-HHHHHHHHHHHHHHHHhc--CCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhH
Q 030871 82 DEKLVK-ESDEKLGKTLDVYEERLS--KSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 158 (170)
Q Consensus 82 ~~~~~~-~~~~~~~~~l~~le~~L~--~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 158 (170)
.+...+ .......+.+..+++.|. +++|++|+++|+||+.++..+..+......... ..+|+|+++.++|.++|++
T Consensus 116 ~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~~~~~~~-~~~P~L~a~~~kv~~~p~i 194 (206)
T KOG1695|consen 116 SEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEELLDPSAL-DHFPKLKAFKERVSSIPNI 194 (206)
T ss_pred chhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHhcCchhh-ccChHHHHHHHHHhcCchH
Confidence 122222 555566788999999988 457999999999999999999988764222234 7789999999999999999
Q ss_pred HHHHHhcC
Q 030871 159 KKVLELCK 166 (170)
Q Consensus 159 ~~~~~~~~ 166 (170)
+++++...
T Consensus 195 k~~i~~r~ 202 (206)
T KOG1695|consen 195 KKYLESRP 202 (206)
T ss_pred HHHHhcCC
Confidence 99998754
No 15
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.93 E-value=1.7e-24 Score=151.25 Aligned_cols=143 Identities=15% Similarity=0.155 Sum_probs=104.0
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccC-CCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCC
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQ-GTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGR 79 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (170)
+||.|+||+|+++|.+|+||.+|++||++++++. .+.+.|.++..++....+. ..+..++ .
T Consensus 53 inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~~~~~~~~~~~l~--------~~~~~~~----------~ 114 (236)
T TIGR00862 53 LAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPKHPESNTAGLDIF--------AKFSAYI----------K 114 (236)
T ss_pred HCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHH--------HHHHHHH----------H
Confidence 6999999999999999999999999999999742 1345555554433221111 1111110 0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhc------------------CCCcccCCCccHhhhhhhhhHhhhcCC----ccccc
Q 030871 80 PVDEKLVKESDEKLGKTLDVYEERLS------------------KSKYLAGDFFSLADLSHIPFTHYLVGP----MGRQH 137 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~le~~L~------------------~~~fl~G~~~t~aDi~l~~~l~~~~~~----~~~~~ 137 (170)
...+...+...+.+.+.|..||++|. +++|+.|+++|+|||++++.+.++... .+..+
T Consensus 115 ~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i 194 (236)
T TIGR00862 115 NSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDI 194 (236)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCc
Confidence 11223334455668889999999986 578999999999999999999988743 22334
Q ss_pred cccCCccHHHHHHHHhcChhHHHHH
Q 030871 138 MIRDRKHVSAWWDDISNRPSWKKVL 162 (170)
Q Consensus 138 ~~~~~p~l~~w~~~~~~~p~~~~~~ 162 (170)
. +++|+|.+|++++.++|+|++++
T Consensus 195 ~-~~~p~l~~w~~~~~~~~sf~~t~ 218 (236)
T TIGR00862 195 P-AEFTGVWRYLSNAYAREEFTNTC 218 (236)
T ss_pred c-ccCchHHHHHHHHhccchHHhhC
Confidence 5 89999999999999999999974
No 16
>PLN02378 glutathione S-transferase DHAR1
Probab=99.92 E-value=3.7e-25 Score=153.84 Aligned_cols=141 Identities=23% Similarity=0.245 Sum_probs=101.8
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCC
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRP 80 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (170)
+||+|+||+|++||.+|+||.+|++||++++++ ..+ .++.+++.+...+.. .+... ... ..
T Consensus 54 inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~--~~l--~~~~~~a~i~~~~~~-------~~~~~-----~~~---~~ 114 (213)
T PLN02378 54 ISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPD--PPL--KTPAEFASVGSNIFG-------TFGTF-----LKS---KD 114 (213)
T ss_pred hCCCCCCCEEEECCEEecCHHHHHHHHHHhCCC--CCC--CCHHHHHHHHHHHHH-------HHHHH-----Hhc---CC
Confidence 699999999999999999999999999999974 223 345566655443221 11111 000 00
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhc--CCCcccCCCccHhhhhhhhhHhhhcCCc----cccccccCCccHHHHHHHHhc
Q 030871 81 VDEKLVKESDEKLGKTLDVYEERLS--KSKYLAGDFFSLADLSHIPFTHYLVGPM----GRQHMIRDRKHVSAWWDDISN 154 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~le~~L~--~~~fl~G~~~t~aDi~l~~~l~~~~~~~----~~~~~~~~~p~l~~w~~~~~~ 154 (170)
..+...+.+.+.|..+|++|+ +++|++|+++|+|||++++++.++.... ..... ..+|+|.+|+++|.+
T Consensus 115 ----~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~-~~~p~l~~w~~~~~~ 189 (213)
T PLN02378 115 ----SNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVP-ESFPHVHNYMKTLFS 189 (213)
T ss_pred ----hhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCch-hHhHHHHHHHHHHhc
Confidence 112234566778999999998 4689999999999999999987754321 11234 789999999999999
Q ss_pred ChhHHHHHHhc
Q 030871 155 RPSWKKVLELC 165 (170)
Q Consensus 155 ~p~~~~~~~~~ 165 (170)
+|++++++...
T Consensus 190 rpa~~~~~~~~ 200 (213)
T PLN02378 190 LDSFEKTKTEE 200 (213)
T ss_pred CCCeecccCCh
Confidence 99999887553
No 17
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.91 E-value=2.7e-23 Score=148.05 Aligned_cols=140 Identities=21% Similarity=0.291 Sum_probs=102.8
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCC
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRP 80 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (170)
+||.|+||+|+++|.+|+||.+|++||++++++ +.+ .++.+++++..++.. .+ ..+ +.. ..
T Consensus 107 iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~--~~L--~~~~era~i~~~l~~---~~----~~~-----~~~---~~ 167 (265)
T PLN02817 107 ISPEGKVPVVKLDEKWVADSDVITQALEEKYPD--PPL--ATPPEKASVGSKIFS---TF----IGF-----LKS---KD 167 (265)
T ss_pred hCCCCCCCEEEECCEEEecHHHHHHHHHHHCCC--CCC--CCHHHHHHHHHHHHH---HH----HHH-----hcc---CC
Confidence 699999999999999999999999999999985 334 346777777664421 11 010 100 11
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCccHhhhhhhhhHhhhcCCcc---c-cccccCCccHHHHHHHHhcC
Q 030871 81 VDEKLVKESDEKLGKTLDVYEERLSK-SKYLAGDFFSLADLSHIPFTHYLVGPMG---R-QHMIRDRKHVSAWWDDISNR 155 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~le~~L~~-~~fl~G~~~t~aDi~l~~~l~~~~~~~~---~-~~~~~~~p~l~~w~~~~~~~ 155 (170)
+ .+...+.+.+.|+.||++|++ ++|++|+++|+|||++++++.++..... . ... ..+|+|.+|+++|.++
T Consensus 168 --~--~~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~-~~~P~L~~w~~ri~~r 242 (265)
T PLN02817 168 --P--GDGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVP-DSLPFVKSYMKNIFSM 242 (265)
T ss_pred --c--chHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcc-ccCHHHHHHHHHHhcc
Confidence 1 112235667789999999975 6999999999999999999887653211 1 124 7899999999999999
Q ss_pred hhHHHHHHh
Q 030871 156 PSWKKVLEL 164 (170)
Q Consensus 156 p~~~~~~~~ 164 (170)
|++++++..
T Consensus 243 ps~~~~~~~ 251 (265)
T PLN02817 243 ESFVKTRAL 251 (265)
T ss_pred hhHhhcCCC
Confidence 999998653
No 18
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=1.1e-22 Score=131.87 Aligned_cols=152 Identities=18% Similarity=0.222 Sum_probs=122.2
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCC
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRP 80 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (170)
+||.++||+|++||.+|+||.||+.||++.+++ +++.|+++.-|+.+++....+.+...+.=...+.. .. ++.
T Consensus 52 iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~--ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~-~l----~ek 124 (217)
T KOG0868|consen 52 INPMEKVPTLVIDGLTLTESLAIIEYLEETYPD--PPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLK-ML----NEK 124 (217)
T ss_pred cCchhhCCeEEECCEEeehHHHHHHHHHhcCCC--CCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHH-Hh----ccc
Confidence 699999999999999999999999999999996 67999999999999999888877776542222211 11 112
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcC--CCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhH
Q 030871 81 VDEKLVKESDEKLGKTLDVYEERLSK--SKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 158 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~le~~L~~--~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 158 (170)
............+.+.+..||+.|.. ++|.+||++|+||+++.+.++....... .+ ..||-+.+..+...+.|+|
T Consensus 125 ~~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~rf~v--dl-~PYPti~ri~e~l~elpaF 201 (217)
T KOG0868|consen 125 EPGYGDQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRFHV--DL-TPYPTITRINEELAELPAF 201 (217)
T ss_pred ccchhhHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhhccc--cC-CcCchHHHHHHHHHhCHHH
Confidence 22223455666778899999999875 6899999999999999999988744332 45 8999999999999999999
Q ss_pred HHHH
Q 030871 159 KKVL 162 (170)
Q Consensus 159 ~~~~ 162 (170)
+.+.
T Consensus 202 q~ah 205 (217)
T KOG0868|consen 202 QAAH 205 (217)
T ss_pred HhcC
Confidence 9875
No 19
>PRK10387 glutaredoxin 2; Provisional
Probab=99.90 E-value=7.4e-24 Score=147.08 Aligned_cols=148 Identities=16% Similarity=0.154 Sum_probs=103.6
Q ss_pred CCCCCCCCee-EeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhc----
Q 030871 1 MQPFGELPVI-QDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSS---- 75 (170)
Q Consensus 1 ~~P~g~vP~l-~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 75 (170)
+||.|+||+| .+||.+|+||.+|++||+++|++ +.+ + ..+++.++.|+.+....+...+...+.......
T Consensus 42 ~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~--~~l-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (210)
T PRK10387 42 MIGQKQVPILQKDDGSYMPESLDIVHYIDELDGK--PLL-T--GKRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATP 116 (210)
T ss_pred hcCCcccceEEecCCeEecCHHHHHHHHHHhCCC--ccC-C--CcccHHHHHHHHHHHHHhhcchhcccccCCCcccCCH
Confidence 4789999999 57889999999999999999974 223 3 125678888888776544433221111000000
Q ss_pred ----------ccCCCCCH---HHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCC
Q 030871 76 ----------KFGRPVDE---KLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDR 142 (170)
Q Consensus 76 ----------~~~~~~~~---~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~ 142 (170)
.......+ ...+...+.+.+.|+.+|++|++ +|++|+++|+||+++++++.++...... ..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~~~----~~~ 191 (210)
T PRK10387 117 SARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVKGI----EWP 191 (210)
T ss_pred HHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeecCC----CCC
Confidence 00000000 01134567888999999999987 9999999999999999999988764332 335
Q ss_pred ccHHHHHHHHhcChhH
Q 030871 143 KHVSAWWDDISNRPSW 158 (170)
Q Consensus 143 p~l~~w~~~~~~~p~~ 158 (170)
|+|.+|++||.++|.+
T Consensus 192 p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 192 PRVADYRDNMSKKTQV 207 (210)
T ss_pred HHHHHHHHHHHHHhCC
Confidence 9999999999999875
No 20
>PLN02907 glutamate-tRNA ligase
Probab=99.87 E-value=2.3e-21 Score=153.55 Aligned_cols=131 Identities=15% Similarity=0.221 Sum_probs=105.3
Q ss_pred CCCCCCCeeE-eCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCC
Q 030871 2 QPFGELPVIQ-DGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRP 80 (170)
Q Consensus 2 ~P~g~vP~l~-~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (170)
+|+|+||+|+ +||.+|+||.+|++||++.++. ..++|.++.+++++++|+.+......
T Consensus 33 ~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~--~~L~p~d~~erAqV~qWL~~~~~~~~------------------- 91 (722)
T PLN02907 33 LKSGSAPTLLFSSGEKLTGTNVLLRYIARSASL--PGFYGQDAFESSQVDEWLDYAPTFSS------------------- 91 (722)
T ss_pred CCCCCCcEEEECCCCEEECHHHHHHHHHHhCCC--cCCCCCCHHHHHHHHHHHHHHhhccc-------------------
Confidence 6899999999 4788999999999999999974 45889999999999999998653110
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhc-CCccccccccCCccHHHHHHHHhcChh--
Q 030871 81 VDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLV-GPMGRQHMIRDRKHVSAWWDDISNRPS-- 157 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~-~~~~~~~~~~~~p~l~~w~~~~~~~p~-- 157 (170)
...+...|+.||.+|++++||+|+++|+|||++++.+.... ........ ..+|+|.+|+++|.++|+
T Consensus 92 ---------~~~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~~~~~-~~yPnL~RW~erI~arPs~~ 161 (722)
T PLN02907 92 ---------GSEFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWESLRKS-KKYQNLVRWFNSISAEYSDI 161 (722)
T ss_pred ---------HHHHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhccccc-ccCHHHHHHHHHHHhCCCcc
Confidence 01345678999999999999999999999999999886541 11111134 789999999999999999
Q ss_pred ----HHHHHH
Q 030871 158 ----WKKVLE 163 (170)
Q Consensus 158 ----~~~~~~ 163 (170)
++++.+
T Consensus 162 ~~~~~~a~~~ 171 (722)
T PLN02907 162 LNEVTAAYVG 171 (722)
T ss_pred hhhHHHHHHH
Confidence 555554
No 21
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.87 E-value=8.9e-22 Score=136.49 Aligned_cols=147 Identities=17% Similarity=0.202 Sum_probs=99.1
Q ss_pred CCCCCCCCeeE-eCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHH--------
Q 030871 1 MQPFGELPVIQ-DGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQL-------- 71 (170)
Q Consensus 1 ~~P~g~vP~l~-~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 71 (170)
+||.|+||+|+ +||.+++||.+|++||+++|+. +.+.+ ..+.+++.|+.+....+...+...+...
T Consensus 41 ~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (209)
T TIGR02182 41 MIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGE--PLLTG---KVSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQ 115 (209)
T ss_pred hcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCC--ccCCC---CChHHHHHHHHHHHHHhhhhhccccccCCCcccCCH
Confidence 58999999998 8889999999999999999974 22322 2456677777765554432221111000
Q ss_pred -----Hhhc-ccCCCCCH---HHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCC
Q 030871 72 -----LFSS-KFGRPVDE---KLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDR 142 (170)
Q Consensus 72 -----~~~~-~~~~~~~~---~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~ 142 (170)
.... ..+..... ...+...+.+++.|+.+|.+|++++|+.| ++|+||+++++++.++..... ..+
T Consensus 116 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~~-----~~~ 189 (209)
T TIGR02182 116 SARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVAG-----INW 189 (209)
T ss_pred HHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeecC-----CCC
Confidence 0000 00000000 00134567788899999999999999855 699999999999988765332 125
Q ss_pred c-cHHHHHHHHhcChhH
Q 030871 143 K-HVSAWWDDISNRPSW 158 (170)
Q Consensus 143 p-~l~~w~~~~~~~p~~ 158 (170)
| ||.+|++||.+++++
T Consensus 190 p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 190 PSRVADYLDNMSKKSKV 206 (209)
T ss_pred ChHHHHHHHHHHHHhCC
Confidence 6 999999999998865
No 22
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.82 E-value=1.5e-19 Score=123.95 Aligned_cols=163 Identities=25% Similarity=0.280 Sum_probs=108.9
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCC-HHHHHHHH---HHHH------HHHh-----hh----c
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKT-IEERGLVE---QWLE------VEAH-----NY----N 61 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~-~~~~~~~~---~~~~------~~~~-----~~----~ 61 (170)
+||.|.|||+++++.+|+|+.-|++|++++|-+. ..+.|.- ..+..++. +..+ |-.+ .+ +
T Consensus 72 lNp~gevPVl~~g~~II~d~tqIIdYvErtf~ge-r~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~ 150 (325)
T KOG4420|consen 72 LNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGE-RVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSM 150 (325)
T ss_pred cCCCCCCceEecCCeecccHHHHHHHHHHhhccc-ccccccccccccHHHHHHHHHHHhcCcchhhccccccchhhcccc
Confidence 6999999999999999999999999999999753 3355631 11111111 1111 0000 00 0
Q ss_pred hHHHHHHHHHHhh----------------------------cccCCCCCHHHHHHHHHHHHHHHHHHHHHhcC----CCc
Q 030871 62 PAIYELTIQLLFS----------------------------SKFGRPVDEKLVKESDEKLGKTLDVYEERLSK----SKY 109 (170)
Q Consensus 62 ~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~----~~f 109 (170)
.+...-++..... .....-.+....+...+.+...|+..|..|.. ..|
T Consensus 151 iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~w 230 (325)
T KOG4420|consen 151 IPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYLAKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELW 230 (325)
T ss_pred CcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhcccccee
Confidence 0001100000000 00001122345667778888899999999987 579
Q ss_pred ccCCCccHhhhhhhhhHhhhcCCcccc--ccccCCccHHHHHHHHhcChhHHHHHHh
Q 030871 110 LAGDFFSLADLSHIPFTHYLVGPMGRQ--HMIRDRKHVSAWWDDISNRPSWKKVLEL 164 (170)
Q Consensus 110 l~G~~~t~aDi~l~~~l~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 164 (170)
++|+.+|+||+++.++|+++...+... +-....|||.+|+.|+..|++|++++..
T Consensus 231 L~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrpnle~Yf~rvrrR~sf~kvlg~ 287 (325)
T KOG4420|consen 231 LCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSRPNLESYFERVRRRFSFRKVLGD 287 (325)
T ss_pred eccccchHHHHHHHHHHHHHHHcccHHHhcccCCCccHHHHHHHHHhhhHHHHhhhh
Confidence 999999999999999999998876533 3226889999999999999999998754
No 23
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.80 E-value=1.4e-18 Score=109.97 Aligned_cols=117 Identities=57% Similarity=1.017 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhh
Q 030871 45 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 124 (170)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~ 124 (170)
+++++..|+.+....+...+........+.+..+....+...+...+.+.+.++.||++|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 81 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLP 81 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHH
Confidence 47789999999888887766555444444443334455666677888999999999999999999999999999999999
Q ss_pred hHhhhcCCccccccccCCccHHHHHHHHhcChhHHHHH
Q 030871 125 FTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 162 (170)
Q Consensus 125 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 162 (170)
++.++......... +.+|+|.+|+++|.++|++++++
T Consensus 82 ~~~~~~~~~~~~~~-~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 82 YLQYLMATPFAKLF-DSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHccchhhh-hcCchHHHHHHHHHhCHHHHhhC
Confidence 98887542222234 68999999999999999998863
No 24
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.76 E-value=4.7e-18 Score=107.10 Aligned_cols=111 Identities=17% Similarity=0.207 Sum_probs=88.5
Q ss_pred CHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhh
Q 030871 42 TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLS 121 (170)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~ 121 (170)
++..++++++|+++.+..+.+.+....+... ..++..+...+.+.+.++.||++|++++|++|+++|+|||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~ 74 (115)
T cd03196 3 DPAALKEMLALIAENDNEFKHHLDRYKYADR--------YPEESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWA 74 (115)
T ss_pred chHHHHHHHHHHHHcchhhHHHHHhccchhh--------cCcccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHH
Confidence 5788999999999999988877665543321 11123667788899999999999999999999999999999
Q ss_pred hhhhHhhhcCCcccc-ccccCCccHHHHHHHHhcChhHHHH
Q 030871 122 HIPFTHYLVGPMGRQ-HMIRDRKHVSAWWDDISNRPSWKKV 161 (170)
Q Consensus 122 l~~~l~~~~~~~~~~-~~~~~~p~l~~w~~~~~~~p~~~~~ 161 (170)
+++++.++....... .. .++|+|.+|+++|.++|+++++
T Consensus 75 l~~~l~~~~~~~~~~~~~-~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 75 IFPFVRQFAHVDPKWFDQ-SPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHHHHHHHHhhhcccCc-ccCHHHHHHHHHHHcChHHHhh
Confidence 999887665322111 24 7899999999999999999986
No 25
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.74 E-value=1.2e-17 Score=105.12 Aligned_cols=113 Identities=22% Similarity=0.339 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhh
Q 030871 45 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 124 (170)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~ 124 (170)
++++++.|+.|.++.+.+.+......... .......+...+...+.+.+.++.+|+.|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~ 79 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARW--ATDEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFV 79 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhccccccc--ccChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHH
Confidence 47889999999998888765433221110 0001122445567788899999999999999999999999999999999
Q ss_pred hHhhhcCCccccccccCCccHHHHHHHHhcChhHHHHH
Q 030871 125 FTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 162 (170)
Q Consensus 125 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 162 (170)
.+.++..... .. +++|++.+|+++|.++|++++++
T Consensus 80 ~~~~~~~~~~--~~-~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 80 VLRWAPGVGL--DL-SDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHhhcCC--Ch-hhChHHHHHHHHHHhCHHhHhhC
Confidence 9987754322 24 67999999999999999999863
No 26
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.74 E-value=2e-17 Score=103.98 Aligned_cols=112 Identities=25% Similarity=0.343 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhh
Q 030871 45 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 124 (170)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~ 124 (170)
++++++.|+.|.+..+.+.+.......... ....+...+...+.+.+.++.+|+.|++++|++|+++|+|||++++
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 76 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYA----PEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFP 76 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhC----CCCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHH
Confidence 367899999999998887765443322222 1234456677888899999999999999999999999999999999
Q ss_pred hHhhhcCCccccccccCCccHHHHHHHHhcChhHHHHH
Q 030871 125 FTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 162 (170)
Q Consensus 125 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 162 (170)
.+.+....... .. ..+|++.+|+++|.++|++++++
T Consensus 77 ~~~~~~~~~~~-~~-~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 77 WVRRLEWIGID-DL-DDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHHHHhcccc-ch-hhchHHHHHHHHHhhCHHHHHhc
Confidence 99887654332 35 78999999999999999999875
No 27
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.73 E-value=6.7e-17 Score=100.63 Aligned_cols=105 Identities=15% Similarity=0.219 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhh
Q 030871 44 EERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHI 123 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~ 123 (170)
.++++++.|+.+++..+.+.+..... . .++..+...+.+.+.|..||+.|++++|++|+++|+|||+++
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~ 70 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEK----------G-RKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALA 70 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh----------C-cHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHH
Confidence 46899999999999887766543321 1 144456788889999999999999999999999999999999
Q ss_pred hhHhhhcCCccccccccCCccHHHHHHHHhcChhHHHH
Q 030871 124 PFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKV 161 (170)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 161 (170)
+.+.+..... .... ..+|++.+|+++|.++|+++++
T Consensus 71 ~~~~~~~~~~-~~~~-~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 71 PLLWRLPALG-IELP-KQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHcC-CCCc-ccchHHHHHHHHHHCCHHHHHh
Confidence 9986654222 1233 5789999999999999999975
No 28
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.72 E-value=5.7e-17 Score=105.85 Aligned_cols=110 Identities=21% Similarity=0.260 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhh
Q 030871 44 EERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHI 123 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~ 123 (170)
..+++++.|++|..+.+........ ....++..+.....+.+.|+.||++|++++|++|+++|+|||+++
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~ 72 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAG----------FATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLF 72 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHh----------hccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHH
Confidence 3478899999999988776543210 123455667788889999999999999999999999999999999
Q ss_pred hhHhhhcCCc------cccccccCCccHHHHHHHHhcChhHHHHHHh
Q 030871 124 PFTHYLVGPM------GRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 164 (170)
Q Consensus 124 ~~l~~~~~~~------~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 164 (170)
+++.++.... ....+ ..+|+|.+|+++|.++|++++++..
T Consensus 73 ~~l~~~~~~~~~~~~~~~~~~-~~~P~L~~w~~r~~~~P~~k~~~~~ 118 (142)
T cd03190 73 TTLIRFDAVYVQHFKCNLKRI-RDYPNLWNYLRRLYQNPGVAETTNF 118 (142)
T ss_pred HHHHHHHHHhhhhcccccchh-hhCchHHHHHHHHhcCchHhhhcCH
Confidence 9987763211 11234 6899999999999999999998765
No 29
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.72 E-value=1.2e-16 Score=102.26 Aligned_cols=118 Identities=25% Similarity=0.358 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHH-hcCCCcccCCCccHhhhhhh
Q 030871 46 RGLVEQWLEVEAHNYNPAIYELTIQLLFSSK-FGRPVDEKLVKESDEKLGKTLDVYEER-LSKSKYLAGDFFSLADLSHI 123 (170)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~le~~-L~~~~fl~G~~~t~aDi~l~ 123 (170)
++++++|+.|..+.+...+..........+. .+....+...+...+.+.+.++.+|++ +++++|++|+++|+|||+++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~ 81 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAV 81 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHH
Confidence 4578899998887777655443333222222 223345677788888999999999997 56578999999999999999
Q ss_pred hhHhhhcCCccccccccCCccHHHHHHHHhc--ChhHHHHHHhc
Q 030871 124 PFTHYLVGPMGRQHMIRDRKHVSAWWDDISN--RPSWKKVLELC 165 (170)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~--~p~~~~~~~~~ 165 (170)
+.+.+...... ... ..+|+|.+|+++|.+ +|+++++.+-.
T Consensus 82 ~~~~~~~~~~~-~~~-~~~p~l~~w~~~~~~~~~p~~~~~~~~~ 123 (126)
T cd03183 82 CEIMQPEAAGY-DVF-EGRPKLAAWRKRVKEAGNPLFDEAHKII 123 (126)
T ss_pred HHHHHHHhcCC-ccc-ccCchHHHHHHHHHHhcchhHHHHHHHH
Confidence 98877654332 235 789999999999999 99999987653
No 30
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.71 E-value=2.7e-16 Score=108.49 Aligned_cols=149 Identities=17% Similarity=0.191 Sum_probs=105.8
Q ss_pred CCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchH------------------
Q 030871 2 QPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPA------------------ 63 (170)
Q Consensus 2 ~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 63 (170)
++.|++|.++.||+.+.||..|+.+|.+.++- .+. -++.++++..++...++..+...
T Consensus 89 Sr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~-~~~---L~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~ 164 (281)
T KOG4244|consen 89 SRNGTLPFIELNGEHIADSDLIEDRLRKHFKI-PDD---LSAEQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKL 164 (281)
T ss_pred ccCCCcceEEeCCeeccccHHHHHHHHHHcCC-CCC---CCHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhc
Confidence 67899999999999999999999999999973 111 24667777777666655433211
Q ss_pred ----------HHHHH-----HHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhh
Q 030871 64 ----------IYELT-----IQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHY 128 (170)
Q Consensus 64 ----------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~ 128 (170)
+..++ .........|. .+.-..++..+.+.+.|..++..|++++||+|+++|-+|+.+|++|.+
T Consensus 165 ~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~-IG~f~~~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~ 243 (281)
T KOG4244|consen 165 IGLPGFLFPLLLPLFWKAIFGKKVYKRSTGA-IGDFESAEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQ 243 (281)
T ss_pred cCccccchHHHHHHHHHHHHHHHHHHHhhcc-ccCcCHHHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhh
Confidence 11111 01111111111 222334557777889999999999999999999999999999999999
Q ss_pred hcCCcccc---ccccCCccHHHHHHHHhcC
Q 030871 129 LVGPMGRQ---HMIRDRKHVSAWWDDISNR 155 (170)
Q Consensus 129 ~~~~~~~~---~~~~~~p~l~~w~~~~~~~ 155 (170)
...-.... .+++++|||.+|++||++.
T Consensus 244 v~YP~~~~i~d~le~d~p~l~eYceRIr~~ 273 (281)
T KOG4244|consen 244 VYYPFRSHISDLLEGDFPNLLEYCERIRKE 273 (281)
T ss_pred eeccCCCcHHHHHhhhchHHHHHHHHHHHH
Confidence 88732221 3458999999999999863
No 31
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.71 E-value=3.1e-16 Score=99.43 Aligned_cols=114 Identities=21% Similarity=0.248 Sum_probs=85.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhccc----CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCc
Q 030871 40 GKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKF----GRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFF 115 (170)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~ 115 (170)
|.++.++++++.|+.+..+.+...+............. +....+...+.....+.+.|+.||++|++++|++|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 56788999999999999888877655433222111100 00123445556777899999999999999999999999
Q ss_pred cHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcCh
Q 030871 116 SLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRP 156 (170)
Q Consensus 116 t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 156 (170)
|+|||++++.+.++..... .. ..+|+|.+|+++|.++|
T Consensus 82 t~ADi~l~~~~~~~~~~~~--~~-~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 82 TAADIMMSFPLEAALARGP--LL-EKYPNIAAYLERIEARP 119 (119)
T ss_pred CHHHHHHHHHHHHHHHcCc--cc-ccCchHHHHHHHHhcCC
Confidence 9999999988887754332 35 78999999999999986
No 32
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.70 E-value=1.5e-16 Score=101.78 Aligned_cols=109 Identities=19% Similarity=0.261 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhh
Q 030871 44 EERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHI 123 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~ 123 (170)
.++++++.|+.+.++.+...+...... .+...+...+.+.+.++.||++|++++|++|+++|+|||+++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~ 70 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAA-----------KGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALG 70 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHcc-----------chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHH
Confidence 468899999999988877665433211 134456678888999999999999999999999999999999
Q ss_pred hhHhhhcCC---cccc--ccccCCccHHHHHHHHhcChhHHHHHHh
Q 030871 124 PFTHYLVGP---MGRQ--HMIRDRKHVSAWWDDISNRPSWKKVLEL 164 (170)
Q Consensus 124 ~~l~~~~~~---~~~~--~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 164 (170)
+++.++... .... .. ..+|++.+|+++|.++|++++++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~-~~~p~l~~w~~~~~~~p~~~~~~~~ 115 (126)
T cd03185 71 SFLGWFRAYEEVGGVKLLDE-EKTPLLAAWAERFLELEAVKEVLPD 115 (126)
T ss_pred HHHHHHHHHHHHcCccccCc-ccCchHHHHHHHHHhccHHHHhCCC
Confidence 988886432 1111 23 6799999999999999999998754
No 33
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.69 E-value=1.9e-16 Score=100.94 Aligned_cols=117 Identities=26% Similarity=0.388 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhh
Q 030871 46 RGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPF 125 (170)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~ 125 (170)
+++++.|+.+.+..+...+...+... .. ..+.+....+...+.+.+.|+.+|+.|++++|++|+++|+|||+++++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~ 77 (123)
T cd03181 2 EAQVLQWVSFANTELLPAVAAWFLPL-LG---IAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGA 77 (123)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHH-cC---ccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHH
Confidence 67889999999888887765443321 11 123345567788888999999999999999999999999999999999
Q ss_pred HhhhcCCcc-ccccccCCccHHHHHHHHhcChhHHHHHHhcCC
Q 030871 126 THYLVGPMG-RQHMIRDRKHVSAWWDDISNRPSWKKVLELCKT 167 (170)
Q Consensus 126 l~~~~~~~~-~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~ 167 (170)
+.+...... .... ..+|++.+|++++.++|++++++.+.+|
T Consensus 78 ~~~~~~~~~~~~~~-~~~p~l~~w~~~~~~~p~~~~~~~~~~~ 119 (123)
T cd03181 78 LLLGFTYVFDKEWR-AKYPNVTRWFNTVVNQPIFKAVFGEVKL 119 (123)
T ss_pred HHHHHHHHcCHHHH-HhChHHHHHHHHHHcCHHHHHHcCCCCc
Confidence 887643211 1134 6789999999999999999999888766
No 34
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.69 E-value=6.9e-16 Score=96.37 Aligned_cols=109 Identities=21% Similarity=0.325 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhh
Q 030871 45 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 124 (170)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~ 124 (170)
+++++++|+.+..+.+...+...+...... ......+...+...+.+.+.|+.+|++|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~ 79 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRT--PPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGC 79 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcC--CcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHH
Confidence 478899999999888888765543322111 112234456667888999999999999999999999999999999998
Q ss_pred hHhhhcCCccccccccCCccHHHHHHHHhcChhH
Q 030871 125 FTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 158 (170)
Q Consensus 125 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 158 (170)
++....... ... .++|+|.+|+++|.++|++
T Consensus 80 ~~~~~~~~~--~~~-~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 80 SAYRWFELP--IER-PPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHcc--ccc-ccCchHHHHHHHHHhCCCC
Confidence 875433222 234 8899999999999999975
No 35
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.69 E-value=5.9e-16 Score=97.81 Aligned_cols=115 Identities=23% Similarity=0.232 Sum_probs=88.3
Q ss_pred CHHHHHHHHHHHHHHHhhhchHHHHHHHHHHh-hcc-cCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhh
Q 030871 42 TIEERGLVEQWLEVEAHNYNPAIYELTIQLLF-SSK-FGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLAD 119 (170)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aD 119 (170)
++.++++++.|+.+++..+...+...+..... .+. ......+...+...+.+.+.|..||+.|++++|++|+++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 35688999999999988887765544322110 010 0123456677888889999999999999999999999999999
Q ss_pred hhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhH
Q 030871 120 LSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 158 (170)
Q Consensus 120 i~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 158 (170)
|++++.+.++...... +. ..+|+|.+|++++.++|++
T Consensus 81 i~l~~~~~~~~~~~~~-~~-~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKVVKLR-VP-EELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHhHHHHhcCCC-Cc-cccHHHHHHHHHHHhccCC
Confidence 9999999887654322 33 6899999999999999974
No 36
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.68 E-value=8.4e-16 Score=97.75 Aligned_cols=112 Identities=14% Similarity=0.090 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhh
Q 030871 45 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 124 (170)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~ 124 (170)
+++.++.+++.+.+.... +..+.. ....+...+.....+.+.+..||++|++++|++|+++|+||+++++
T Consensus 2 e~~~id~~~~~~~d~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~ 71 (121)
T cd03209 2 ERIRVDMLEQQAMDLRMG-LARICY---------SPDFEKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYE 71 (121)
T ss_pred chHHHHHHHHHHHHHHHH-HHHhhc---------CcchHHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHH
Confidence 356677777665544322 221111 0112345566778889999999999999999999999999999999
Q ss_pred hHhhhcCCccccccccCCccHHHHHHHHhcChhHHHHHHhcCCC
Q 030871 125 FTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKTP 168 (170)
Q Consensus 125 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~ 168 (170)
.+.++..... ..+ ..+|+|.+|+++|.++|+++++++..+++
T Consensus 72 ~~~~~~~~~~-~~~-~~~P~l~~~~~rv~~~p~vk~~~~~~~~~ 113 (121)
T cd03209 72 ALDQHRIFEP-DCL-DAFPNLKDFLERFEALPKISAYMKSDRFI 113 (121)
T ss_pred HHHHHHHhCc-ccc-ccChHHHHHHHHHHHCHHHHHHHhcccCc
Confidence 9988765322 245 78999999999999999999999886543
No 37
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.68 E-value=5.7e-16 Score=98.50 Aligned_cols=115 Identities=15% Similarity=0.121 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhc--CCCcccCCCccHhhhh
Q 030871 44 EERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLS--KSKYLAGDFFSLADLS 121 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~--~~~fl~G~~~t~aDi~ 121 (170)
.+++++++|+.+.++.+.+.+...+..... ...+. ..+...+...+.+.+.|..+|+.|+ +++|++|+++|+|||+
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~ 79 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLT-EELGL-DEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADIC 79 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHH-HhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHH
Confidence 468999999999998887653332222111 11111 1223334455678899999999998 4579999999999999
Q ss_pred hhhhHhhhcCCccccccccCCccHHHHHHHHhcChhHHHHHH
Q 030871 122 HIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 163 (170)
Q Consensus 122 l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 163 (170)
+++.+.+...... .. ..+|+|.+|+++|.++|++++++.
T Consensus 80 ~~~~~~~~~~~~~--~~-~~~p~l~~w~~~~~~~p~~~~~~~ 118 (121)
T cd03191 80 LVPQVYNARRFGV--DL-SPYPTIARINEACLELPAFQAAHP 118 (121)
T ss_pred HHHHHHHHHHhCC--Cc-ccCcHHHHHHHHHHhChhHHHhCc
Confidence 9999877653321 14 788999999999999999999864
No 38
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.67 E-value=1.1e-15 Score=96.83 Aligned_cols=109 Identities=25% Similarity=0.402 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhh
Q 030871 45 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 124 (170)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~ 124 (170)
+++++++|+.+....+.............. .. ...+.....+.+.++.||+.|++++|++|+++|+||+++++
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~ 74 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFG----GA---EPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVA 74 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHc----CC---CCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHH
Confidence 477889999988777776554433322211 11 22345667889999999999998899999999999999999
Q ss_pred hHhhhcCCccccccccCCccHHHHHHHHhcChhHHHHH
Q 030871 125 FTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 162 (170)
Q Consensus 125 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 162 (170)
++.++..... ... ..+|+|.+|+++|.++|++++..
T Consensus 75 ~~~~~~~~~~-~~~-~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 75 TVSTLEALLP-LDL-SKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred HHHHHHHhcC-CCh-hhCchHHHHHHHHHcccchHHHH
Confidence 9988764121 124 67999999999999999999865
No 39
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.66 E-value=1.6e-15 Score=98.39 Aligned_cols=114 Identities=22% Similarity=0.245 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhc--CCCcccCCCccHhhhhh
Q 030871 45 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLS--KSKYLAGDFFSLADLSH 122 (170)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~--~~~fl~G~~~t~aDi~l 122 (170)
+.+.+++.++.+.+...... .+.+ .......+.......+.+.+.|+.||++|+ +++|++|+++|+|||++
T Consensus 3 e~a~iD~i~~~v~D~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l 75 (137)
T cd03208 3 ERALIDMYVEGTADLMEMIL-MLPF------LPPEEKEAKLALIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHL 75 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHcc------CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHH
Confidence 56677777776665543322 1111 000111111223344466889999999998 67899999999999999
Q ss_pred hhhHhhhcCCccccccccCCccHHHHHHHHhcChhHHHHHHhcCC
Q 030871 123 IPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKT 167 (170)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~ 167 (170)
++.+.++..... ..+ ..+|+|.+|+++|.++|++++++++.+.
T Consensus 76 ~~~l~~~~~~~~-~~l-~~~P~l~~~~~rv~~~P~vk~~~~~~~~ 118 (137)
T cd03208 76 LEAILMVEELDP-SLL-SDFPLLQAFKTRISNLPTIKKFLQPGSP 118 (137)
T ss_pred HHHHHHHHHhch-hhh-ccChHHHHHHHHHHcCHHHHHHHhcCCC
Confidence 999988764332 245 7899999999999999999999987654
No 40
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.65 E-value=3.3e-15 Score=95.66 Aligned_cols=82 Identities=22% Similarity=0.225 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC---CCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhHHH
Q 030871 84 KLVKESDEKLGKTLDVYEERLSK---SKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKK 160 (170)
Q Consensus 84 ~~~~~~~~~~~~~l~~le~~L~~---~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~ 160 (170)
...+...+.+.+.|..||+.|++ ++|++|+++|+||+++++.+.++..... ..+ ..+|+|.+|+++|.++|++++
T Consensus 31 ~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~~-~~~-~~~P~l~~~~~rv~~~p~v~~ 108 (126)
T cd03210 31 AGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLAP-GCL-DAFPLLKAFVERLSARPKLKA 108 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhCh-Hhh-hcChHHHHHHHHHHhCcHHHH
Confidence 34456677788999999999974 5899999999999999999888764322 245 889999999999999999999
Q ss_pred HHHhcCC
Q 030871 161 VLELCKT 167 (170)
Q Consensus 161 ~~~~~~~ 167 (170)
+++..++
T Consensus 109 ~~~~~~~ 115 (126)
T cd03210 109 YLESDAF 115 (126)
T ss_pred HHhCcCC
Confidence 9988654
No 41
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.65 E-value=7.8e-16 Score=98.32 Aligned_cols=106 Identities=18% Similarity=0.180 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcC--CCcccCCCccHhhhhh
Q 030871 45 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSK--SKYLAGDFFSLADLSH 122 (170)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~fl~G~~~t~aDi~l 122 (170)
++++.+.|+.+++..+......+ .. ++..+...+.+...|+.+|+.|++ ++|++|+++|+|||++
T Consensus 2 ~ra~~r~~~~~~~~~~~~~~~~~-~~------------~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~ 68 (124)
T cd03184 2 EKAQQKLLLERFSKVVSAFYKLL-GA------------PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMI 68 (124)
T ss_pred hHHHHHHHHHHHhhhhHHHHHHH-hc------------cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHh
Confidence 47888999998874443333221 11 334456777888899999999985 7999999999999999
Q ss_pred hhhHhhhcCCccc----cccccCCccHHHHHHHHhcChhHHHHHHh
Q 030871 123 IPFTHYLVGPMGR----QHMIRDRKHVSAWWDDISNRPSWKKVLEL 164 (170)
Q Consensus 123 ~~~l~~~~~~~~~----~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 164 (170)
++++.++...... ... ..+|+|.+|+++|.++|++++++..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~-~~~p~l~~w~~r~~~~p~v~~~~~~ 113 (124)
T cd03184 69 WPWFERLEALKLLLGYEFPL-DRFPKLKKWMDAMKEDPAVQAFYTD 113 (124)
T ss_pred hHHHHHHHHHHhhccccCCc-ccChHHHHHHHHhccChHHHHHhCC
Confidence 9998876543211 134 7899999999999999999998754
No 42
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.60 E-value=2.3e-15 Score=93.06 Aligned_cols=76 Identities=20% Similarity=0.267 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhHHHHHHh
Q 030871 85 LVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 164 (170)
Q Consensus 85 ~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 164 (170)
..+.....+.+.++.||++|++++|++|+++|+|||++++.+.+..... .. ..+|+|.+|++++.++|+++++.+.
T Consensus 27 ~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~~---~~-~~~p~l~~w~~~~~~~p~~~~~~~~ 102 (103)
T cd03207 27 ARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQFG---LL-PERPAFDAYIARITDRPAFQRAAAI 102 (103)
T ss_pred hhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHcC---CC-CCChHHHHHHHHHHcCHHHHHHhcc
Confidence 3566678899999999999999999999999999999999988876532 34 7899999999999999999998764
No 43
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.59 E-value=4.8e-15 Score=102.90 Aligned_cols=147 Identities=20% Similarity=0.302 Sum_probs=114.3
Q ss_pred CCCCeeEeCC---eEEeehHHHHHHHHHHhccC---CCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccC
Q 030871 5 GELPVIQDGD---FILYESRAIMRYYAEKYRSQ---GTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFG 78 (170)
Q Consensus 5 g~vP~l~~~~---~~i~es~~I~~yl~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (170)
-+||||.|.. .+-.||..|++-+...|..- ...++| ...+.+++.+.+++-+.+...+.. .|
T Consensus 128 vTVPVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP--~~Lr~eId~~n~~Iy~~vNNGVYk----------~G 195 (324)
T COG0435 128 VTVPVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYP--EALRTEIDELNKWIYDTVNNGVYK----------AG 195 (324)
T ss_pred eeEEEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCC--HHHHHHHHHHHhhhcccccCceee----------ec
Confidence 3789999754 34589999999999777532 345777 556888999988877766554332 23
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccc------cccccCCccHHHHHHHH
Q 030871 79 RPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGR------QHMIRDRKHVSAWWDDI 152 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~------~~~~~~~p~l~~w~~~~ 152 (170)
-...++..+++.+.+-..|+.||..|+++.|++|+++|.||+-||+.|-++.-+... .-. ..+|||-.|+.++
T Consensus 196 FA~tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI-~dypnL~~yLr~L 274 (324)
T COG0435 196 FATTQEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRI-RDYPNLWGYLRDL 274 (324)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchh-hcCchHHHHHHHH
Confidence 345566777777888889999999999999999999999999999999998755321 123 5599999999999
Q ss_pred hcChhHHHHHHh
Q 030871 153 SNRPSWKKVLEL 164 (170)
Q Consensus 153 ~~~p~~~~~~~~ 164 (170)
-+.|.|+++++.
T Consensus 275 Yq~pg~~~T~df 286 (324)
T COG0435 275 YQLPGFAETVDF 286 (324)
T ss_pred hcCcccccccch
Confidence 999999998764
No 44
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.59 E-value=3.6e-14 Score=94.60 Aligned_cols=150 Identities=13% Similarity=0.197 Sum_probs=110.7
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHH------HHHHhh
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELT------IQLLFS 74 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 74 (170)
|+|.|+||.|..|.++++|-.+|+.+..++--..++ .-+..+++.++.+++.++..+...-.... +.....
T Consensus 62 mSP~G~vPllr~g~~~~aef~pIV~fVeak~~~l~s---~lsE~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~ 138 (257)
T KOG3027|consen 62 MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKGVTLTS---WLSEDQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTA 138 (257)
T ss_pred cCCCCCCceeeecchhhhhhhHHHHHHHHhccchhh---hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhh
Confidence 689999999999999999999999999988632111 12456788889988888776643311111 111111
Q ss_pred cccCC-------------------------CCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhh
Q 030871 75 SKFGR-------------------------PVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYL 129 (170)
Q Consensus 75 ~~~~~-------------------------~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~ 129 (170)
...|. ..+....+...+.+...++.|+.+|+.++||.|++||-+|..+|+++..+
T Consensus 139 ~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlyti 218 (257)
T KOG3027|consen 139 LRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTI 218 (257)
T ss_pred hccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHh
Confidence 11111 12223456678888899999999999999999999999999999999998
Q ss_pred cCCcccc-----ccccCCccHHHHHHHHhc
Q 030871 130 VGPMGRQ-----HMIRDRKHVSAWWDDISN 154 (170)
Q Consensus 130 ~~~~~~~-----~~~~~~p~l~~w~~~~~~ 154 (170)
..+.... .+ .+|+||.++++||++
T Consensus 219 lTt~Lpn~ela~~l-kkys~LlefcrrIeq 247 (257)
T KOG3027|consen 219 LTTRLPNMELANIL-KKYSNLLEFCRRIEQ 247 (257)
T ss_pred hhhcCCcHHHHHHH-HHhHHHHHHHHHHHH
Confidence 8765432 45 789999999999985
No 45
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.59 E-value=1.3e-14 Score=88.43 Aligned_cols=95 Identities=15% Similarity=0.220 Sum_probs=74.1
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 030871 24 MRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEER 103 (170)
Q Consensus 24 ~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~ 103 (170)
++||++..+ ++|.++.+.++++.|++.....+.. ...+.+.+.++.+|++
T Consensus 1 ~r~~~~~~~-----~~~~~~~~~~~vd~~~d~~~~~l~~-------------------------~~~~~~~~~l~~le~~ 50 (96)
T cd03200 1 ARFLYRLLG-----PAPNAPNAATNIDSWVDTAIFQLAE-------------------------GSSKEKAAVLRALNSA 50 (96)
T ss_pred CchHHHHhc-----ccCCCchHHHHHHHHHHHHHHHHhc-------------------------CCHHHHHHHHHHHHHH
Confidence 478888832 8899999999999999975544321 1233445678899999
Q ss_pred hcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhc
Q 030871 104 LSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISN 154 (170)
Q Consensus 104 L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 154 (170)
|++++|++|+++|+|||++++.+.+. . ... ..+|+|.+|+++|.+
T Consensus 51 L~~~~fl~Gd~~tiADi~l~~~l~~~---~--~~~-~~~p~l~~w~~r~~~ 95 (96)
T cd03200 51 LGRSPWLVGSEFTVADIVSWCALLQT---G--LAS-AAPANVQRWLKSCEN 95 (96)
T ss_pred HcCCCccCCCCCCHHHHHHHHHHHHc---c--ccc-ccChHHHHHHHHHHh
Confidence 99999999999999999999888653 1 123 678999999999976
No 46
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.59 E-value=7.1e-15 Score=94.03 Aligned_cols=82 Identities=20% Similarity=0.242 Sum_probs=67.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcC----------------CCcccCCCccHhhhhhhhhHhhhcCC----cccccccc
Q 030871 81 VDEKLVKESDEKLGKTLDVYEERLSK----------------SKYLAGDFFSLADLSHIPFTHYLVGP----MGRQHMIR 140 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~le~~L~~----------------~~fl~G~~~t~aDi~l~~~l~~~~~~----~~~~~~~~ 140 (170)
..++..+...+.+...|..||.+|++ ++|++|+++|+|||++++.+.++... .+.... .
T Consensus 22 ~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~-~ 100 (134)
T cd03198 22 SNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIP-A 100 (134)
T ss_pred CChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcc-c
Confidence 44566677788899999999999986 67999999999999999998866422 122234 7
Q ss_pred CCccHHHHHHHHhcChhHHHHHH
Q 030871 141 DRKHVSAWWDDISNRPSWKKVLE 163 (170)
Q Consensus 141 ~~p~l~~w~~~~~~~p~~~~~~~ 163 (170)
.+|+|.+|+++|.+||++++++-
T Consensus 101 ~~P~L~aw~~ri~aRPsfk~t~~ 123 (134)
T cd03198 101 DLTGLWRYLKNAYQREEFTNTCP 123 (134)
T ss_pred cCHHHHHHHHHHHCCHHHHHHcC
Confidence 89999999999999999999864
No 47
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.58 E-value=4.8e-15 Score=90.20 Aligned_cols=74 Identities=28% Similarity=0.535 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcCh
Q 030871 82 DEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRP 156 (170)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 156 (170)
.++..+.....+.+.|+.+|+.|++++|++|+++|+||+++++.+.+.......... +++|+|.+|+++|.++|
T Consensus 22 ~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~~-~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 22 DEEMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFLF-EKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTTH-TTSHHHHHHHHHHHTSH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCccc-ccCHHHHHHHHHHHcCC
Confidence 345677788889999999999999999999999999999999999988776655444 89999999999999998
No 48
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.58 E-value=1.9e-14 Score=90.56 Aligned_cols=111 Identities=20% Similarity=0.155 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhc-CCCcccCCCccHhhhhh
Q 030871 44 EERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLS-KSKYLAGDFFSLADLSH 122 (170)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-~~~fl~G~~~t~aDi~l 122 (170)
.++++++.|+.+..+.+.+.......... ..+ .......+...+.+.+.++.+|..|+ +++|++| ++|+||+++
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l 76 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVV---FAG-AKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDL 76 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccce---ecC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHH
Confidence 57899999999999988765111100110 111 11113445667777888999999995 5589999 599999999
Q ss_pred hhhHhhhcCCccccccccCCccHHHHHHHHhcChhHHHHHHh
Q 030871 123 IPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 164 (170)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 164 (170)
++++.+....... + . |++.+|++||.+||+++++++.
T Consensus 77 ~~~~~~~~~~g~~--l-~--p~l~ay~~r~~~rPa~~~~~~~ 113 (114)
T cd03195 77 ALMLNRLVLNGDP--V-P--ERLRDYARRQWQRPSVQAWLAL 113 (114)
T ss_pred HHHHHHHHHcCCC--C-C--HHHHHHHHHHHCCHHHHHHHhc
Confidence 9999988765432 2 3 9999999999999999999864
No 49
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.57 E-value=3.1e-14 Score=95.27 Aligned_cols=141 Identities=18% Similarity=0.227 Sum_probs=97.7
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCC
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGR 79 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (170)
++|.|++|+|..|+..++||..|.++|+++++.. -++. ++.|.+-+- .+.|.. +..++ .
T Consensus 55 ~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p---~~~~~~~~E~asag------~diF~k-F~~fi----------~ 114 (221)
T KOG1422|consen 55 ISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPPP---KLPTLAPPESASAG------SDIFAK-FSAFI----------K 114 (221)
T ss_pred hCCCCCCCeEEeCCceeccHHHHHHHHHHhcCCC---CCcccCCHHHHhhH------HHHHHH-HHHHH----------h
Confidence 5799999999999999999999999999999852 2232 122222111 111111 11111 0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhcC---CCcccCCCccHhhhhhhhhHhhhcCCcc----ccccccCCccHHHHHHHH
Q 030871 80 PVDEKLVKESDEKLGKTLDVYEERLSK---SKYLAGDFFSLADLSHIPFTHYLVGPMG----RQHMIRDRKHVSAWWDDI 152 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~le~~L~~---~~fl~G~~~t~aDi~l~~~l~~~~~~~~----~~~~~~~~p~l~~w~~~~ 152 (170)
...++.-+...+.+-+.|..|+++|+. ++|+.||++|+|||.+.|-|+.+....+ -.+- +.++.+.+|++++
T Consensus 115 ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP-~~lt~V~rYl~~~ 193 (221)
T KOG1422|consen 115 KSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIP-ASLTGVWRYLKNA 193 (221)
T ss_pred CchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCc-hhhhHHHHHHHHH
Confidence 122222233445566678999999985 6899999999999999999998765432 2234 7889999999999
Q ss_pred hcChhHHHHH
Q 030871 153 SNRPSWKKVL 162 (170)
Q Consensus 153 ~~~p~~~~~~ 162 (170)
-++.+|..+.
T Consensus 194 ya~d~F~~tc 203 (221)
T KOG1422|consen 194 YARDEFTNTC 203 (221)
T ss_pred HhHHHhhcCC
Confidence 9998887654
No 50
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.56 E-value=1.2e-14 Score=83.22 Aligned_cols=68 Identities=26% Similarity=0.408 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHH
Q 030871 84 KLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDD 151 (170)
Q Consensus 84 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~ 151 (170)
...+...+.+.+.|+.||++|++++|++|+++|+|||++++++.++..........+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 45677889999999999999999999999999999999999999998876543323899999999986
No 51
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.56 E-value=1.1e-14 Score=90.10 Aligned_cols=104 Identities=25% Similarity=0.327 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhh
Q 030871 45 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP 124 (170)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~ 124 (170)
+++++++|+.+.++.+...+........+. ......++..+.....+.+.++.||+.|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~ 79 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYL--GLGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAA 79 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeec--cCCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHH
Confidence 478899999998887776554332221111 113344566778888999999999999998899999999999999999
Q ss_pred hHhhhcCCccccccccCCccHHHHHHHHh
Q 030871 125 FTHYLVGPMGRQHMIRDRKHVSAWWDDIS 153 (170)
Q Consensus 125 ~l~~~~~~~~~~~~~~~~p~l~~w~~~~~ 153 (170)
++.++...... . ..+|+|.+|+++++
T Consensus 80 ~~~~~~~~~~~--~-~~~p~l~~~~~~~~ 105 (105)
T cd03179 80 YTHVADEGGFD--L-ADYPAIRAWLARIE 105 (105)
T ss_pred HHHhccccCCC--h-HhCccHHHHHHhhC
Confidence 99887643322 4 77999999999874
No 52
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.56 E-value=5.8e-14 Score=89.10 Aligned_cols=103 Identities=18% Similarity=0.340 Sum_probs=69.5
Q ss_pred CHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhc---CCCcccCCCccHh
Q 030871 42 TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLS---KSKYLAGDFFSLA 118 (170)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~fl~G~~~t~a 118 (170)
++..|+.+++|+.+... + ...+. .+..... ..+.+.+.++.||+.|+ +++|+.| ++|+|
T Consensus 1 d~~~ra~~~~~~~~~~~-~----~~~~~----~~~~~~~--------~~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlA 62 (120)
T cd03203 1 DPAKREFADELLAYTDA-F----TKALY----SSLIKGD--------PSAEAAAALDYIENALSKFDDGPFFLG-QFSLV 62 (120)
T ss_pred CHHHHHHHHHHHHHHHH-H----HHHHH----HHHhcCC--------chHHHHHHHHHHHHHHHhcCCCCCcCC-CccHH
Confidence 35678899999888221 1 11111 1111111 12233556777777776 4799999 99999
Q ss_pred hhhhhhhHhhhcC----CccccccccCCccHHHHHHHHhcChhHHHHHH
Q 030871 119 DLSHIPFTHYLVG----PMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 163 (170)
Q Consensus 119 Di~l~~~l~~~~~----~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 163 (170)
||++++++.++.. ..+.... +.+|+|.+|+++|.++|+++++..
T Consensus 63 Di~l~~~~~~~~~~~~~~~~~~~~-~~~P~l~~W~~~~~~rp~~~~~~~ 110 (120)
T cd03203 63 DIAYVPFIERFQIFLSELFNYDIT-EGRPNLAAWIEEMNKIEAYTQTKQ 110 (120)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccc-ccCcHHHHHHHHHhcchHHHhHcC
Confidence 9999999876542 1222234 689999999999999999999864
No 53
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.55 E-value=2.5e-14 Score=87.95 Aligned_cols=71 Identities=21% Similarity=0.346 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhH
Q 030871 85 LVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 158 (170)
Q Consensus 85 ~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 158 (170)
..+...+.+.+.++.+|++|++++|+.|+++|+||+++++++.+..... ... .++|+|.+|+++|.++|++
T Consensus 30 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~--~~~-~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 30 DKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEGG--VDL-EDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhccC--CCh-hhCcHHHHHHHHHHhCcCC
Confidence 3456788899999999999999999999999999999999987644321 134 7899999999999999975
No 54
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.54 E-value=5.4e-14 Score=88.40 Aligned_cols=71 Identities=18% Similarity=0.259 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHh---cCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhHHHHHH
Q 030871 87 KESDEKLGKTLDVYEERL---SKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 163 (170)
Q Consensus 87 ~~~~~~~~~~l~~le~~L---~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 163 (170)
+...+.+.+.+..+|..| ++++|++|+ +|+||+++++.+.+...... ...|+|.+|+++|.++|+++++++
T Consensus 40 ~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~~~-----~~~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 40 EAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTYGL-----PLSPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHcCC-----CCCHHHHHHHHHHHCCHHHHHHHh
Confidence 344455555555555554 567899999 99999999999988754321 112999999999999999999985
No 55
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.54 E-value=3.2e-14 Score=88.35 Aligned_cols=79 Identities=25% Similarity=0.284 Sum_probs=64.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhcCC----------CcccCCCccHhhhhhhhhHhhhcCCcccc--ccccCCccHHH
Q 030871 80 PVDEKLVKESDEKLGKTLDVYEERLSKS----------KYLAGDFFSLADLSHIPFTHYLVGPMGRQ--HMIRDRKHVSA 147 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~le~~L~~~----------~fl~G~~~t~aDi~l~~~l~~~~~~~~~~--~~~~~~p~l~~ 147 (170)
.-+.+..+.....+.+.|+.||.+|.++ +|++|+++|+|||++++.+.++....... +...++|+|.+
T Consensus 21 ~~~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~ 100 (111)
T cd03204 21 HDNVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEA 100 (111)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHH
Confidence 3455677888999999999999999865 49999999999999999998877543221 11168999999
Q ss_pred HHHHHhcChhH
Q 030871 148 WWDDISNRPSW 158 (170)
Q Consensus 148 w~~~~~~~p~~ 158 (170)
|+++|.+||+|
T Consensus 101 w~~rv~aRpsf 111 (111)
T cd03204 101 YFERVLQRESF 111 (111)
T ss_pred HHHHHHcCCCC
Confidence 99999999975
No 56
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.47 E-value=6.7e-14 Score=88.80 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHhcC-CCcccCCCccHhhhhhhhhHhhhcCCcc----ccccccCCccHHHHHHHHhcChhHHHH
Q 030871 87 KESDEKLGKTLDVYEERLSK-SKYLAGDFFSLADLSHIPFTHYLVGPMG----RQHMIRDRKHVSAWWDDISNRPSWKKV 161 (170)
Q Consensus 87 ~~~~~~~~~~l~~le~~L~~-~~fl~G~~~t~aDi~l~~~l~~~~~~~~----~~~~~~~~p~l~~w~~~~~~~p~~~~~ 161 (170)
+...+.+.+.|..||..|++ ++|++|+++|+|||++++++.++..... .... ..+|+|.+|+++|.+||+++++
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~-~~~P~l~~w~~rl~~rps~~~t 107 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVP-ESLTSVKSYMKALFSRESFVKT 107 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCc-ccchHHHHHHHHHHCCchhhhc
Confidence 44566788899999999985 7999999999999999998776653211 1134 7899999999999999999997
Q ss_pred HH
Q 030871 162 LE 163 (170)
Q Consensus 162 ~~ 163 (170)
+.
T Consensus 108 ~~ 109 (121)
T cd03201 108 KA 109 (121)
T ss_pred CC
Confidence 65
No 57
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=1.4e-13 Score=94.97 Aligned_cols=148 Identities=18% Similarity=0.268 Sum_probs=109.4
Q ss_pred CCCCeeEeCC---eEEeehHHHHHHHHHHh---ccC----CCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhh
Q 030871 5 GELPVIQDGD---FILYESRAIMRYYAEKY---RSQ----GTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFS 74 (170)
Q Consensus 5 g~vP~l~~~~---~~i~es~~I~~yl~~~~---~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (170)
-+||+|-|-. .+-.||..|++.+...| -.. ...|+| +..+++++++.+|+.+.+...+...
T Consensus 122 fTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P--~~L~~~Ide~N~wvy~~INNGVYk~------- 192 (319)
T KOG2903|consen 122 FTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYP--SSLRAQIDETNSWVYDKINNGVYKC------- 192 (319)
T ss_pred EEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCC--HHHHHHHhhhhceecccccCceeee-------
Confidence 3799998753 45689999999999433 211 123556 5668899999998777665543322
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCC--cccCCCccHhhhhhhhhHhhhcCCcc------ccccccCCccHH
Q 030871 75 SKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSK--YLAGDFFSLADLSHIPFTHYLVGPMG------RQHMIRDRKHVS 146 (170)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~--fl~G~~~t~aDi~l~~~l~~~~~~~~------~~~~~~~~p~l~ 146 (170)
|-...++..+..-..+-+.|+.+|..|+++. |++|+++|.||+-||+.+-++..+.. ....+.+||+|.
T Consensus 193 ---GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~ 269 (319)
T KOG2903|consen 193 ---GFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLH 269 (319)
T ss_pred ---ccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHH
Confidence 2334445556666667778999999999987 99999999999999999888765432 113436999999
Q ss_pred HHHHHHhc-ChhHHHHHHh
Q 030871 147 AWWDDISN-RPSWKKVLEL 164 (170)
Q Consensus 147 ~w~~~~~~-~p~~~~~~~~ 164 (170)
.|++++-. .|+++.+.+.
T Consensus 270 ~~lk~iY~~~~~~~~Ttd~ 288 (319)
T KOG2903|consen 270 NWLKNIYWNIPGFSSTTDF 288 (319)
T ss_pred HHHHHHHhhccchhhccch
Confidence 99999998 8999888654
No 58
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.43 E-value=2.9e-13 Score=82.75 Aligned_cols=98 Identities=31% Similarity=0.454 Sum_probs=72.2
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhh
Q 030871 50 EQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYL 129 (170)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~ 129 (170)
+.|..+.++.+...+........ ......+...+...+.+.+.++.||++|++++|+.|+++|+||+++++++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~ 77 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAF----VGPEVDEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARL 77 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeec----cCCCCCHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHH
Confidence 45666766666554443322111 11123456777888889999999999999999999999999999999999998
Q ss_pred cCCcccc-ccccCCccHHHHHHHH
Q 030871 130 VGPMGRQ-HMIRDRKHVSAWWDDI 152 (170)
Q Consensus 130 ~~~~~~~-~~~~~~p~l~~w~~~~ 152 (170)
....... +. ..+|++.+|+++|
T Consensus 78 ~~~~~~~~~~-~~~p~l~~~~~~~ 100 (100)
T cd00299 78 DLLGPLLGLL-DEYPRLAAWYDRL 100 (100)
T ss_pred HHhhhhhhhh-ccCccHHHHHHhC
Confidence 7655432 24 7899999999875
No 59
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.42 E-value=1.8e-12 Score=82.70 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhc
Q 030871 86 VKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISN 154 (170)
Q Consensus 86 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 154 (170)
.+...+.+.+.|+.+|++|++++|+.|+++|+||+++++.+.+.......... +.+|++.+|++||.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~~~~~~-~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVSPFPLL-EEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcCccccc-ccCChHHHHHHHHhc
Confidence 45677888999999999999999999999999999999999888764333345 789999999999976
No 60
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.39 E-value=2.9e-12 Score=79.22 Aligned_cols=101 Identities=22% Similarity=0.209 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcC--CCcccCCCccHhhhhh
Q 030871 45 ERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSK--SKYLAGDFFSLADLSH 122 (170)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~fl~G~~~t~aDi~l 122 (170)
++.+++.+++.+++......... +. ..+....+...+...+.+.+.++.||++|++ ++|++|+++|+||+++
T Consensus 2 e~~~v~~~~~~~~d~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l 75 (104)
T cd03192 2 EAARVDALVDTIADLRAEFAKYF-YE-----KDGEEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVV 75 (104)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-hc-----CchHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHH
Confidence 45677888877555443332222 11 0011123566677888899999999999987 8999999999999999
Q ss_pred hhhHhhhcCCccccccccCCccHHHHHHHH
Q 030871 123 IPFTHYLVGPMGRQHMIRDRKHVSAWWDDI 152 (170)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~ 152 (170)
++++.++......... ..+|++.+|+++|
T Consensus 76 ~~~~~~~~~~~~~~~~-~~~p~l~~~~~~~ 104 (104)
T cd03192 76 FDVLDYLLYLDPKLLL-KKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHhhCchhhH-HhChhHHHHHHhC
Confidence 9999888654432125 7899999999875
No 61
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.38 E-value=8.9e-13 Score=84.23 Aligned_cols=72 Identities=15% Similarity=0.194 Sum_probs=59.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCcc-----ccccccCCccHHHHHHHHh
Q 030871 81 VDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMG-----RQHMIRDRKHVSAWWDDIS 153 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~-----~~~~~~~~p~l~~w~~~~~ 153 (170)
.+....++..+...+.|+.|+.+|++++||+|++||.+|+++++++..+..... .... .++|||.+|++||+
T Consensus 50 ~gr~~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~-~~~pnL~~y~~Ri~ 126 (126)
T cd03211 50 WDDKTLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKV-KKYSNLLAFCRRIE 126 (126)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHH-HhCcHHHHHHHhcC
Confidence 344566778888889999999999999999999999999999999988774311 1235 78999999999984
No 62
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.35 E-value=1.9e-12 Score=79.33 Aligned_cols=67 Identities=27% Similarity=0.400 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC--cccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhc
Q 030871 84 KLVKESDEKLGKTLDVYEERLSKSK--YLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISN 154 (170)
Q Consensus 84 ~~~~~~~~~~~~~l~~le~~L~~~~--fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 154 (170)
...+...+.+.+.|..+++.|++++ |++|++||+|||++|+++..+... . .. ..+|||.+|++||++
T Consensus 31 ~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~-~--~~-~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 31 ASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA-D--FP-KDYPNLVRWYERIEE 99 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC-H--HT-TTCHHHHHHHHHHHT
T ss_pred hhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc-c--cc-cccHHHHHHHHhhcC
Confidence 4567788889999999999999887 999999999999999999877744 1 12 589999999999974
No 63
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.32 E-value=7.2e-12 Score=75.12 Aligned_cols=65 Identities=14% Similarity=0.123 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccc-----cccccCCccHHHHHHHHh
Q 030871 88 ESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGR-----QHMIRDRKHVSAWWDDIS 153 (170)
Q Consensus 88 ~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~-----~~~~~~~p~l~~w~~~~~ 153 (170)
...+.+.+.++.+|+.|++++|+.|+++|+|||++++.+.++...... ... ..+|+|.+|+++|.
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~-~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLIL-KEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHH-HhCcHHHHHHHHhC
Confidence 567788899999999999999999999999999999999887643211 124 67999999999974
No 64
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=99.23 E-value=5.8e-11 Score=76.89 Aligned_cols=72 Identities=17% Similarity=0.244 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccc-----cccccCCccHHHHHHHHhc
Q 030871 82 DEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGR-----QHMIRDRKHVSAWWDDISN 154 (170)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~-----~~~~~~~p~l~~w~~~~~~ 154 (170)
.....++..+...+.|+.|+++|++++||+|+++|.+|+++++++..+...... ... .++|||.+|++||.+
T Consensus 58 ~~~~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~-~~~pnL~~~~~ri~~ 134 (137)
T cd03212 58 ETEVEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHL-KQCPNLCRFCDRILS 134 (137)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHH-HHCcHHHHHHHHHHH
Confidence 345567778888899999999999999999999999999999998877643222 235 789999999999975
No 65
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.18 E-value=1.6e-10 Score=70.60 Aligned_cols=70 Identities=20% Similarity=0.268 Sum_probs=57.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccc-cccccCCccHHHHHHHH
Q 030871 79 RPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGR-QHMIRDRKHVSAWWDDI 152 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~-~~~~~~~p~l~~w~~~~ 152 (170)
....+...+.....+.+.|..+|++|++++| +++|+|||++++.+.+....... ... .++|+|.+|+++|
T Consensus 28 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~~~~~~-~~~p~l~~w~~rm 98 (98)
T cd03205 28 EKRSQPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHPDLDWR-AAHPALAAWYARF 98 (98)
T ss_pred hhhChHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHccCcchh-hhChHHHHHHHhC
Confidence 3455677888999999999999999998888 89999999999999887643222 234 7899999999985
No 66
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=99.17 E-value=7.1e-11 Score=76.44 Aligned_cols=67 Identities=18% Similarity=0.331 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhc
Q 030871 87 KESDEKLGKTLDVYEERLS-KSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISN 154 (170)
Q Consensus 87 ~~~~~~~~~~l~~le~~L~-~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 154 (170)
+..++.+...++.+-+.+. +++|+.|+++|+|||++++++..+........+ .++|++.+|++||.+
T Consensus 78 ~D~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~~~~Dl-~~~p~I~~W~eRm~~ 145 (149)
T cd03197 78 DDVREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHPAFKDM-VEETKIGEWYERMDA 145 (149)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhccccch-hhCcCHHHHHHHHHH
Confidence 4456667777776655554 568999999999999999999888766444356 789999999999986
No 67
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=1.8e-10 Score=75.40 Aligned_cols=144 Identities=19% Similarity=0.249 Sum_probs=97.4
Q ss_pred CCCCeeE-eCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCH
Q 030871 5 GELPVIQ-DGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDE 83 (170)
Q Consensus 5 g~vP~l~-~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (170)
.+||+|+ ++|..+.||..|+.|+.+..+. ++ .+...+..++.|+.-+.+-........+....+.. +.++...
T Consensus 46 KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~---~~--lt~~~~pai~~wlrkv~~y~nkll~PR~~k~~l~E-F~T~sA~ 119 (215)
T COG2999 46 KQVPILQKEDGRAMPESLDIVHYVDELDGK---PL--LTGKVRPAIEAWLRKVNGYLNKLLLPRFAKSALPE-FATPSAR 119 (215)
T ss_pred cccceEEccccccchhhhHHHHHHHHhcCc---hh--hccCcCHHHHHHHHHhcchHhhhhhhhHhhcCCcc-ccCHHHH
Confidence 4899998 6788999999999999999974 11 12334567778877655544443333322211111 1111000
Q ss_pred ------------------HHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccH
Q 030871 84 ------------------KLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHV 145 (170)
Q Consensus 84 ------------------~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l 145 (170)
.......+++...|+.|++.+.+..=+.| .++.-||.+||.|+.+....+.+|. .++
T Consensus 120 ~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l~~Li~~~s~~n~-~l~~ddi~vFplLRnlt~v~gi~wp----s~v 194 (215)
T COG2999 120 KYFTDKKEASEGSFESLLNHTAQYLKRIQADLRALDKLIVGPSAVNG-ELSEDDILVFPLLRNLTLVAGIQWP----SRV 194 (215)
T ss_pred HHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHHHHHhcCcchhcc-ccchhhhhhhHHhccceecccCCCc----HHH
Confidence 12344567778888889988877654444 5999999999999999888877666 579
Q ss_pred HHHHHHHhcChhHH
Q 030871 146 SAWWDDISNRPSWK 159 (170)
Q Consensus 146 ~~w~~~~~~~p~~~ 159 (170)
..|+++|.+...+.
T Consensus 195 ~dy~~~msektqV~ 208 (215)
T COG2999 195 ADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHHHHHHhhCcc
Confidence 99999999866554
No 68
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.10 E-value=3.4e-09 Score=75.49 Aligned_cols=150 Identities=14% Similarity=0.167 Sum_probs=103.4
Q ss_pred CCCCCCCeeEeC-CeEEeehHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHHHHHHhhhchHHHHHHHHH--------
Q 030871 2 QPFGELPVIQDG-DFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQL-------- 71 (170)
Q Consensus 2 ~P~g~vP~l~~~-~~~i~es~~I~~yl~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 71 (170)
+|.|++|+|+.+ |..++.-.-|+.+|.+.-.+ -.+... ...+.+....|..+++..+.++....++..
T Consensus 45 s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~k--y~~d~dl~~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~T 122 (313)
T KOG3028|consen 45 SPSGKLPYLITDNGTKVAGPVKIVQFLKKNTKK--YNLDADLSAKQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVT 122 (313)
T ss_pred CCCCCCCeEEecCCceeccHHHHHHHHHHhccc--CCcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHh
Confidence 688999999965 58899999999999985321 122222 256788888999988887766544333211
Q ss_pred --HhhcccC----------------------CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHh
Q 030871 72 --LFSSKFG----------------------RPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTH 127 (170)
Q Consensus 72 --~~~~~~~----------------------~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~ 127 (170)
++..... .+...+..+.......+.++.|+++|++++||+|+++|--|+.+++++.
T Consensus 123 kk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la 202 (313)
T KOG3028|consen 123 KKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLA 202 (313)
T ss_pred HHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHH
Confidence 1110000 0011123444555667889999999999999999999999999999999
Q ss_pred hhcCCcccc-----ccccCCccHHHHHHHHhc
Q 030871 128 YLVGPMGRQ-----HMIRDRKHVSAWWDDISN 154 (170)
Q Consensus 128 ~~~~~~~~~-----~~~~~~p~l~~w~~~~~~ 154 (170)
.+....... .. ..++||.+|++++.+
T Consensus 203 ~~~~~~Lp~~~Lq~~l-~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 203 ILLQVALPNDSLQVHL-LAHKNLVRYVERIRS 233 (313)
T ss_pred HHHhccCCchhHHHHH-HhcchHHHHHHHHHH
Confidence 855443221 23 348999999999876
No 69
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.08 E-value=1.1e-09 Score=76.76 Aligned_cols=67 Identities=19% Similarity=0.300 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHh-cCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhc
Q 030871 87 KESDEKLGKTLDVYEERL-SKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISN 154 (170)
Q Consensus 87 ~~~~~~~~~~l~~le~~L-~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 154 (170)
...++.+...++.+-..| ++++|+-|++|++||+++|++|..+......... -...++.+|+-+|++
T Consensus 287 ~D~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afkd~-~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 287 SDEREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFKDC-LQNTSIGEWYYRMEA 354 (370)
T ss_pred chHHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHHHH-HhcchHHHHHHHHHH
Confidence 335666777777777777 4678999999999999999999999876654444 566789999999986
No 70
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=99.07 E-value=4.1e-09 Score=64.49 Aligned_cols=113 Identities=19% Similarity=0.168 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCccHhhh
Q 030871 42 TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSK-SKYLAGDFFSLADL 120 (170)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~fl~G~~~t~aDi 120 (170)
|..+|++.++...|..++|+..-...-.. -.+.........+...+.+.+.+...+..|.. ++||+|+ .|+||.
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~----vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~ 75 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTN----VVFRGARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADA 75 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-TH----HHHS--------HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChh----hhhcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHH
Confidence 45689999999999999987643222111 11122233445566777777788888888875 6899995 999999
Q ss_pred hhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhHHHHHHh
Q 030871 121 SHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 164 (170)
Q Consensus 121 ~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 164 (170)
.+.+++.++...+.. . -+.+..|.++..++|++++++..
T Consensus 76 dlA~ml~Rl~~~gd~-v----P~~l~~Ya~~qwqrpsVQ~Wla~ 114 (117)
T PF14834_consen 76 DLALMLNRLVTYGDP-V----PERLADYAERQWQRPSVQRWLAL 114 (117)
T ss_dssp HHHHHHHHHHTTT---------HHHHHHHHHHHT-HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCC-C----CHHHHHHHHHHHCCHHHHHHHHH
Confidence 999999999875522 2 26799999999999999999864
No 71
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=98.91 E-value=1.7e-09 Score=64.56 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=31.2
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhcc
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRS 33 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~ 33 (170)
+||+|+||+|+++|.+|+||.+|++||++++.+
T Consensus 56 ~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~~ 88 (91)
T cd03061 56 LAPGTQPPFLLYNGEVKTDNNKIEEFLEETLCP 88 (91)
T ss_pred hCCCCCCCEEEECCEEecCHHHHHHHHHHHccC
Confidence 699999999999999999999999999999964
No 72
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=98.91 E-value=2.1e-09 Score=62.43 Aligned_cols=32 Identities=53% Similarity=0.974 Sum_probs=29.9
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhc
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYR 32 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~ 32 (170)
+||.++||+|+++|.+++||.+|++||+++++
T Consensus 45 ~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 45 INPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred cCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 58999999999999999999999999999874
No 73
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=98.90 E-value=2e-09 Score=62.44 Aligned_cols=32 Identities=31% Similarity=0.426 Sum_probs=30.1
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhc
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYR 32 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~ 32 (170)
+||.|++|+|+++|.+++||.+|++||+++|+
T Consensus 44 ~~p~g~vPvl~~~g~~l~eS~~I~~yL~~~~~ 75 (75)
T cd03080 44 RSPKGKLPFIELNGEKIADSELIIDHLEEKYG 75 (75)
T ss_pred CCCCCCCCEEEECCEEEcCHHHHHHHHHHHcC
Confidence 58999999999999999999999999999874
No 74
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=98.89 E-value=1.8e-09 Score=62.70 Aligned_cols=33 Identities=36% Similarity=0.716 Sum_probs=31.0
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHhcc
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKYRS 33 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~~~ 33 (170)
+||.|+||+|++||.+++||.+|++||+++|++
T Consensus 41 ~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~ 73 (75)
T PF13417_consen 41 LNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPG 73 (75)
T ss_dssp HSTTSBSSEEEETTEEEESHHHHHHHHHHHSTS
T ss_pred hcccccceEEEECCEEEeCHHHHHHHHHHHcCC
Confidence 489999999999999999999999999999974
No 75
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=98.89 E-value=2.2e-09 Score=62.44 Aligned_cols=31 Identities=58% Similarity=1.057 Sum_probs=28.9
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHh
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKY 31 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~ 31 (170)
+||.|+||+|+++|.+++||.+|++||++++
T Consensus 46 ~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 46 INPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred hCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 5899999999999999999999999999875
No 76
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=98.88 E-value=2.3e-09 Score=63.28 Aligned_cols=29 Identities=48% Similarity=0.674 Sum_probs=27.4
Q ss_pred CCCCCCeeEeCCeEEeehHHHHHHHHHHh
Q 030871 3 PFGELPVIQDGDFILYESRAIMRYYAEKY 31 (170)
Q Consensus 3 P~g~vP~l~~~~~~i~es~~I~~yl~~~~ 31 (170)
|+|+||+|++||.+++||.||++||++++
T Consensus 54 P~g~vP~L~~~g~~l~ES~AIl~YLa~~~ 82 (82)
T cd03075 54 DFPNLPYYIDGDVKLTQSNAILRYIARKH 82 (82)
T ss_pred cCCCCCEEEECCEEEeehHHHHHHHhhcC
Confidence 99999999999999999999999998864
No 77
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=98.86 E-value=2.3e-09 Score=61.86 Aligned_cols=28 Identities=36% Similarity=0.767 Sum_probs=26.6
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHH
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYA 28 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~ 28 (170)
+||.|+||+|++||.+++||.+|++||+
T Consensus 46 inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 46 LNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred hCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 6999999999999999999999999984
No 78
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=98.85 E-value=3.5e-09 Score=61.73 Aligned_cols=32 Identities=31% Similarity=0.498 Sum_probs=29.3
Q ss_pred CCCCCCCCeeEeC-CeEEeehHHHHHHHHHHhc
Q 030871 1 MQPFGELPVIQDG-DFILYESRAIMRYYAEKYR 32 (170)
Q Consensus 1 ~~P~g~vP~l~~~-~~~i~es~~I~~yl~~~~~ 32 (170)
+||.|++|+|+++ |..++||.+|++||+++|+
T Consensus 45 ~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 45 INPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred hCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 5899999999977 7899999999999999874
No 79
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=98.84 E-value=4.4e-09 Score=61.90 Aligned_cols=32 Identities=44% Similarity=0.780 Sum_probs=29.7
Q ss_pred CCCCCCCCeeEeC---CeEEeehHHHHHHHHHHhc
Q 030871 1 MQPFGELPVIQDG---DFILYESRAIMRYYAEKYR 32 (170)
Q Consensus 1 ~~P~g~vP~l~~~---~~~i~es~~I~~yl~~~~~ 32 (170)
+||.|+||+|+++ |..|+||.+|++||+++++
T Consensus 46 ~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~ 80 (81)
T cd03048 46 INPNGRIPAIVDHNGTPLTVFESGAILLYLAEKYD 80 (81)
T ss_pred hCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHhC
Confidence 5899999999987 7899999999999999985
No 80
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=98.84 E-value=3.3e-09 Score=61.19 Aligned_cols=29 Identities=41% Similarity=0.710 Sum_probs=27.4
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHH
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAE 29 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~ 29 (170)
+||+|+||+|+++|.+++||.+|++||++
T Consensus 44 ~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 44 KMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred cCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 58999999999999999999999999975
No 81
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=98.83 E-value=5.5e-09 Score=61.22 Aligned_cols=30 Identities=33% Similarity=0.637 Sum_probs=28.5
Q ss_pred CCCCCCeeEeCCeEEeehHHHHHHHHHHhc
Q 030871 3 PFGELPVIQDGDFILYESRAIMRYYAEKYR 32 (170)
Q Consensus 3 P~g~vP~l~~~~~~i~es~~I~~yl~~~~~ 32 (170)
|+|+||+|++||.+|+||.||++||+++++
T Consensus 48 ~~g~vP~L~~~g~~l~ES~AI~~YL~~~~~ 77 (79)
T cd03077 48 MFQQVPMVEIDGMKLVQTRAILNYIAGKYN 77 (79)
T ss_pred CCCCCCEEEECCEEEeeHHHHHHHHHHHcC
Confidence 689999999999999999999999999985
No 82
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=98.81 E-value=7e-09 Score=59.71 Aligned_cols=31 Identities=45% Similarity=1.031 Sum_probs=29.0
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHHh
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEKY 31 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~~ 31 (170)
+||.|+||+++++|..++||.+|++||+++|
T Consensus 43 ~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 43 LNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 5899999999999999999999999999875
No 83
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=98.79 E-value=6.2e-09 Score=61.73 Aligned_cols=32 Identities=38% Similarity=0.514 Sum_probs=29.5
Q ss_pred CCCCCCCCeeEeC-CeEEeehHHHHHHHHHHhc
Q 030871 1 MQPFGELPVIQDG-DFILYESRAIMRYYAEKYR 32 (170)
Q Consensus 1 ~~P~g~vP~l~~~-~~~i~es~~I~~yl~~~~~ 32 (170)
+||.|++|+|+++ |.+++||.+|++||+++|+
T Consensus 52 ~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 52 SGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 4899999999998 8999999999999999874
No 84
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=98.77 E-value=8.6e-09 Score=59.87 Aligned_cols=30 Identities=60% Similarity=1.109 Sum_probs=27.9
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHH
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEK 30 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~ 30 (170)
+||+|++|+|+++|..++||.+|++||+++
T Consensus 47 ~~P~~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 47 RNPFGQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 589999999999999999999999999863
No 85
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=98.77 E-value=7.9e-09 Score=59.12 Aligned_cols=30 Identities=37% Similarity=0.701 Sum_probs=26.3
Q ss_pred CCCCCCCCeeEe-CCeEEeehHHHHHHHHHH
Q 030871 1 MQPFGELPVIQD-GDFILYESRAIMRYYAEK 30 (170)
Q Consensus 1 ~~P~g~vP~l~~-~~~~i~es~~I~~yl~~~ 30 (170)
+||.|+||+|++ +|.+++||.+|++||+++
T Consensus 40 ~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 40 LNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp HSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred cCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 489999999997 789999999999999874
No 86
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=98.75 E-value=1e-08 Score=58.97 Aligned_cols=29 Identities=45% Similarity=0.713 Sum_probs=27.1
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHH
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAE 29 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~ 29 (170)
+||+|++|+|+++|..++||.+|++||++
T Consensus 44 ~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 44 TLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 58999999999999999999999999964
No 87
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=98.74 E-value=1.3e-08 Score=58.76 Aligned_cols=31 Identities=26% Similarity=0.456 Sum_probs=28.3
Q ss_pred CCCC-CCCCeeEeCCeEEeehHHHHHHHHHHh
Q 030871 1 MQPF-GELPVIQDGDFILYESRAIMRYYAEKY 31 (170)
Q Consensus 1 ~~P~-g~vP~l~~~~~~i~es~~I~~yl~~~~ 31 (170)
+||. |++|+|+++|.+++||.+|++||++++
T Consensus 43 ~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 43 SNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred hCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 4895 999999999999999999999999864
No 88
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=98.73 E-value=1.1e-08 Score=58.97 Aligned_cols=28 Identities=61% Similarity=1.168 Sum_probs=26.4
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHH
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYA 28 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~ 28 (170)
+||+|+||+|+++|..|+||.+|++||+
T Consensus 46 ~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 46 MNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred hCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 5899999999999999999999999984
No 89
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.72 E-value=1.5e-08 Score=58.19 Aligned_cols=30 Identities=33% Similarity=0.597 Sum_probs=27.3
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHH
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEK 30 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~ 30 (170)
.+|.|+||+|++||.+|+||.+|+.||+++
T Consensus 45 ~~P~GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 45 MSPSGKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred cCCCCcccEEEECCEEEeCHHHHHHHHhcC
Confidence 368999999999999999999999999864
No 90
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=98.72 E-value=1.3e-08 Score=58.74 Aligned_cols=29 Identities=38% Similarity=0.756 Sum_probs=27.0
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHH
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAE 29 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~ 29 (170)
+||.|+||+|+++|.+++||.+|++||++
T Consensus 46 ~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 46 LNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred hCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 58999999999999999999999999963
No 91
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=98.72 E-value=2.1e-08 Score=58.26 Aligned_cols=29 Identities=48% Similarity=1.015 Sum_probs=27.0
Q ss_pred CCCC-CCCCeeEeC-CeEEeehHHHHHHHHH
Q 030871 1 MQPF-GELPVIQDG-DFILYESRAIMRYYAE 29 (170)
Q Consensus 1 ~~P~-g~vP~l~~~-~~~i~es~~I~~yl~~ 29 (170)
+||. |+||+|+++ |..++||.||++||++
T Consensus 46 ~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 46 INPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp HTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred cccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 3799 999999999 9999999999999975
No 92
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.66 E-value=2.4e-08 Score=57.60 Aligned_cols=28 Identities=39% Similarity=0.825 Sum_probs=26.3
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHH
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYA 28 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~ 28 (170)
+||+|++|+|+++|.+++||.+|++||+
T Consensus 46 ~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 46 FSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred hCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999984
No 93
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.65 E-value=3.4e-08 Score=57.55 Aligned_cols=31 Identities=23% Similarity=0.413 Sum_probs=27.5
Q ss_pred CCCCCCCCeeEe--CCeEEeehHHHHHHHHHHh
Q 030871 1 MQPFGELPVIQD--GDFILYESRAIMRYYAEKY 31 (170)
Q Consensus 1 ~~P~g~vP~l~~--~~~~i~es~~I~~yl~~~~ 31 (170)
+||.|+||+|++ +|.+++||.+|++||+++|
T Consensus 45 ~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 45 KGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred hCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 589999999987 3679999999999999875
No 94
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=98.63 E-value=3.3e-08 Score=57.30 Aligned_cols=29 Identities=38% Similarity=0.700 Sum_probs=26.5
Q ss_pred CCCCCCCCeeEe-CCeEEeehHHHHHHHHH
Q 030871 1 MQPFGELPVIQD-GDFILYESRAIMRYYAE 29 (170)
Q Consensus 1 ~~P~g~vP~l~~-~~~~i~es~~I~~yl~~ 29 (170)
+||.|++|+|++ +|.+++||.+|++||++
T Consensus 45 ~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 45 KFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred hCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 589999999996 58899999999999976
No 95
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.60 E-value=4.6e-08 Score=56.21 Aligned_cols=28 Identities=43% Similarity=0.678 Sum_probs=26.2
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHH
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYA 28 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~ 28 (170)
+||.|++|+|+++|.+++||.+|++||+
T Consensus 46 ~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 46 LNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999984
No 96
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=98.58 E-value=5.1e-08 Score=56.05 Aligned_cols=28 Identities=29% Similarity=0.538 Sum_probs=26.2
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHH
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYA 28 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~ 28 (170)
+||.|++|+|+++|.+++||.+|++||+
T Consensus 46 ~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 46 LNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4899999999999999999999999984
No 97
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=98.56 E-value=8.2e-08 Score=55.13 Aligned_cols=30 Identities=27% Similarity=0.474 Sum_probs=28.0
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHHHH
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYAEK 30 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~~~ 30 (170)
+||.|+||+|+++|.++.||.+|++||+++
T Consensus 43 ~~p~g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 43 RSPTGKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred cCCCcccCEEEECCEEEcCHHHHHHHHhhC
Confidence 589999999999999999999999999874
No 98
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=98.50 E-value=1.2e-07 Score=54.27 Aligned_cols=27 Identities=37% Similarity=0.572 Sum_probs=24.9
Q ss_pred CCCCCCCCeeEeC-CeEEeehHHHHHHH
Q 030871 1 MQPFGELPVIQDG-DFILYESRAIMRYY 27 (170)
Q Consensus 1 ~~P~g~vP~l~~~-~~~i~es~~I~~yl 27 (170)
+||.|+||+|+++ |..++||.+|++|+
T Consensus 43 ~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 43 ASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred HCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 5899999999975 88999999999997
No 99
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=98.46 E-value=4.9e-07 Score=57.67 Aligned_cols=68 Identities=24% Similarity=0.246 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhH
Q 030871 86 VKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 158 (170)
Q Consensus 86 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 158 (170)
.....+.++..|..|+..+.......| ++|+-||.+|+.|+.+....+..+- |++.+|+++|.+...+
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivkgi~~P----~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVKGIQWP----PKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCTTS-------HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhccCCcCC----HHHHHHHHHHHHHcCC
Confidence 456778888899999999887666666 8999999999999999998887666 8999999999986554
No 100
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.42 E-value=1.8e-07 Score=53.83 Aligned_cols=28 Identities=32% Similarity=0.732 Sum_probs=25.2
Q ss_pred CCCCCCCCeeE-eCCeEEeehHHHHHHHH
Q 030871 1 MQPFGELPVIQ-DGDFILYESRAIMRYYA 28 (170)
Q Consensus 1 ~~P~g~vP~l~-~~~~~i~es~~I~~yl~ 28 (170)
+||.|++|+|+ +||..+.||.+|++||+
T Consensus 45 ~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 45 VNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred hCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 58999999998 57889999999999984
No 101
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=98.40 E-value=3.8e-07 Score=53.03 Aligned_cols=31 Identities=13% Similarity=0.249 Sum_probs=27.4
Q ss_pred CCCCCCCCeeEeC----CeEEeehHHHHHHHHHHh
Q 030871 1 MQPFGELPVIQDG----DFILYESRAIMRYYAEKY 31 (170)
Q Consensus 1 ~~P~g~vP~l~~~----~~~i~es~~I~~yl~~~~ 31 (170)
+||.++||+|+++ |.+++||.+|++||++..
T Consensus 42 ~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 42 WSSYKKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred HhCCCccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 3789999999965 679999999999999875
No 102
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=98.40 E-value=2.4e-07 Score=53.03 Aligned_cols=29 Identities=21% Similarity=0.364 Sum_probs=25.8
Q ss_pred CCCCCCCCeeEeC-CeEEeehHHHHHHHHH
Q 030871 1 MQPFGELPVIQDG-DFILYESRAIMRYYAE 29 (170)
Q Consensus 1 ~~P~g~vP~l~~~-~~~i~es~~I~~yl~~ 29 (170)
+||.++||+|+++ |..++||.+|++||++
T Consensus 42 ~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 42 MIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred hcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 4789999999976 8899999999999963
No 103
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=98.40 E-value=2.4e-07 Score=53.26 Aligned_cols=28 Identities=39% Similarity=0.678 Sum_probs=25.1
Q ss_pred CCCCCCCCeeE-eCCeEEeehHHHHHHHH
Q 030871 1 MQPFGELPVIQ-DGDFILYESRAIMRYYA 28 (170)
Q Consensus 1 ~~P~g~vP~l~-~~~~~i~es~~I~~yl~ 28 (170)
+||.|++|+|+ ++|..++||.+|++||+
T Consensus 46 ~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 46 KNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred hCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 58999999998 47789999999999984
No 104
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=98.20 E-value=2.3e-06 Score=49.25 Aligned_cols=29 Identities=21% Similarity=0.458 Sum_probs=27.1
Q ss_pred CCCCCCCeeEeCCeEEeehHHHHHHHHHH
Q 030871 2 QPFGELPVIQDGDFILYESRAIMRYYAEK 30 (170)
Q Consensus 2 ~P~g~vP~l~~~~~~i~es~~I~~yl~~~ 30 (170)
+|.|++|+|+++|..+.||..|++||.++
T Consensus 44 sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 44 SPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 68999999999999999999999999865
No 105
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=98.19 E-value=1.9e-06 Score=48.57 Aligned_cols=28 Identities=46% Similarity=0.954 Sum_probs=26.0
Q ss_pred CCCCCCCCeeEeCCeEEeehHHHHHHHH
Q 030871 1 MQPFGELPVIQDGDFILYESRAIMRYYA 28 (170)
Q Consensus 1 ~~P~g~vP~l~~~~~~i~es~~I~~yl~ 28 (170)
++|.+++|+|.++|..++||.+|++||+
T Consensus 44 ~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 44 LNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred cCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4799999999999999999999999984
No 106
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=98.19 E-value=1.4e-05 Score=50.60 Aligned_cols=67 Identities=16% Similarity=0.133 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhH
Q 030871 87 KESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSW 158 (170)
Q Consensus 87 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 158 (170)
....+.++..|..++.++...... +.++|+-||.+||+|+.+....+..+. |++.+|+++|++...|
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~~~~~-n~~ls~DDi~lFp~LR~Lt~vkgi~~P----~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 59 PQYIAALNALLEELDPLILSSEAV-NGQLSTDDIILFPILRNLTLVKGLVFP----PKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcCcccc-CCcCCHHHHHHHHHHhhhhhhcCCCCC----HHHHHHHHHHHHHhCC
Confidence 456777888888999988544444 457999999999999999988877555 8899999999986543
No 107
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=97.82 E-value=1.6e-05 Score=61.14 Aligned_cols=119 Identities=20% Similarity=0.288 Sum_probs=79.2
Q ss_pred CCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHH
Q 030871 13 GDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEK 92 (170)
Q Consensus 13 ~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (170)
+|..+.++..+..|....... .+.+++.+ .++.+++.|+++... .....
T Consensus 44 d~~~l~~a~~~~~~~~~~~~~-~~~lf~~~-~d~~~vd~w~~~s~~-----------------------------~~~~~ 92 (712)
T KOG1147|consen 44 DGRKLNGATEPVVYSAALAKA-DPKLFGNN-IDRSQVDHWVSFSST-----------------------------FSFDE 92 (712)
T ss_pred ccccccCCccchhhhhhhccc-CHhHcCCc-ccHHHHHHHHHHhhh-----------------------------cchHH
Confidence 455666667777776633321 23466765 788899999986432 12344
Q ss_pred HHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhHHHHH
Q 030871 93 LGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 162 (170)
Q Consensus 93 ~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 162 (170)
+...+..|++.|.-..||+|..+|+||+++|+.++.--.....--....+.++.+|++-....++.+.+.
T Consensus 93 ~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~~~~a~~~v~ 162 (712)
T KOG1147|consen 93 ISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPEFQEAHNKVL 162 (712)
T ss_pred HHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHhHHHHHHHHH
Confidence 5667888888888889999999999999999999864221111111146788999998555555555554
No 108
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=97.36 E-value=0.00029 Score=40.26 Aligned_cols=27 Identities=37% Similarity=0.656 Sum_probs=25.2
Q ss_pred CCCCCCCCeeEe-CCeEEeehHHHHHHH
Q 030871 1 MQPFGELPVIQD-GDFILYESRAIMRYY 27 (170)
Q Consensus 1 ~~P~g~vP~l~~-~~~~i~es~~I~~yl 27 (170)
++|.|++|+|.+ ++..+.+-..|++||
T Consensus 44 ~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 44 LSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 579999999999 889999999999998
No 109
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=94.94 E-value=0.08 Score=35.56 Aligned_cols=39 Identities=26% Similarity=0.262 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhcCC---CcccCCC-ccHhhhhhhhhHhhhcC
Q 030871 93 LGKTLDVYEERLSKS---KYLAGDF-FSLADLSHIPFTHYLVG 131 (170)
Q Consensus 93 ~~~~l~~le~~L~~~---~fl~G~~-~t~aDi~l~~~l~~~~~ 131 (170)
-.+.+..|++.|++. +|++|+. +|-+||.+++.+.-+..
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l~ 155 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLLV 155 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhc
Confidence 346778889999988 9999987 99999999999987663
No 110
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=94.41 E-value=0.038 Score=32.01 Aligned_cols=27 Identities=19% Similarity=0.199 Sum_probs=23.9
Q ss_pred CCCCCCCeeEeCCeEEeehHHHHHHHH
Q 030871 2 QPFGELPVIQDGDFILYESRAIMRYYA 28 (170)
Q Consensus 2 ~P~g~vP~l~~~~~~i~es~~I~~yl~ 28 (170)
++..++|++..||..+.++..|.+||+
T Consensus 53 ~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 53 TGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred HCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 355789999999999999999999984
No 111
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=92.03 E-value=0.2 Score=28.27 Aligned_cols=26 Identities=15% Similarity=0.189 Sum_probs=22.7
Q ss_pred CCCCCCeeEeCCeEEeehHHHHHHHH
Q 030871 3 PFGELPVIQDGDFILYESRAIMRYYA 28 (170)
Q Consensus 3 P~g~vP~l~~~~~~i~es~~I~~yl~ 28 (170)
...++|++..||..+.++..|.+||+
T Consensus 47 g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 47 GAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred CCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 34579999999999999999999974
No 112
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=87.54 E-value=0.91 Score=26.66 Aligned_cols=28 Identities=11% Similarity=0.093 Sum_probs=25.5
Q ss_pred CCCCeeEeCCeEEeehHHHHHHHHHHhc
Q 030871 5 GELPVIQDGDFILYESRAIMRYYAEKYR 32 (170)
Q Consensus 5 g~vP~l~~~~~~i~es~~I~~yl~~~~~ 32 (170)
..||++..||..+.++..|..++.+.++
T Consensus 56 ~tVP~ifi~g~~igG~~dl~~~~~~~~~ 83 (86)
T TIGR02183 56 ETVPQIFVDEKHVGGCTDFEQLVKENFD 83 (86)
T ss_pred CCcCeEEECCEEecCHHHHHHHHHhccc
Confidence 4799999999999999999999988775
No 113
>PRK10638 glutaredoxin 3; Provisional
Probab=86.19 E-value=1.1 Score=25.95 Aligned_cols=26 Identities=8% Similarity=-0.107 Sum_probs=21.7
Q ss_pred CCCCCCCeeEeCCeEEeehHHHHHHH
Q 030871 2 QPFGELPVIQDGDFILYESRAIMRYY 27 (170)
Q Consensus 2 ~P~g~vP~l~~~~~~i~es~~I~~yl 27 (170)
+|..++|++..||..+.+...+..+-
T Consensus 48 ~g~~~vP~i~~~g~~igG~~~~~~~~ 73 (83)
T PRK10638 48 SGRTTVPQIFIDAQHIGGCDDLYALD 73 (83)
T ss_pred hCCCCcCEEEECCEEEeCHHHHHHHH
Confidence 57889999999999999987776654
No 114
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=85.83 E-value=1.5 Score=25.55 Aligned_cols=28 Identities=14% Similarity=0.082 Sum_probs=25.3
Q ss_pred CCCCeeEeCCeEEeehHHHHHHHHHHhc
Q 030871 5 GELPVIQDGDFILYESRAIMRYYAEKYR 32 (170)
Q Consensus 5 g~vP~l~~~~~~i~es~~I~~yl~~~~~ 32 (170)
..+|++..||..+.+...|.+++...++
T Consensus 57 ~~vP~ifi~g~~igg~~~~~~~~~~~~~ 84 (85)
T PRK11200 57 ETVPQIFVDQKHIGGCTDFEAYVKENLG 84 (85)
T ss_pred CcCCEEEECCEEEcCHHHHHHHHHHhcc
Confidence 4799999999999999999999988874
No 115
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=83.32 E-value=1.5 Score=23.89 Aligned_cols=25 Identities=8% Similarity=0.001 Sum_probs=21.1
Q ss_pred CCCCCCCeeEeCCeEEeehHHHHHH
Q 030871 2 QPFGELPVIQDGDFILYESRAIMRY 26 (170)
Q Consensus 2 ~P~g~vP~l~~~~~~i~es~~I~~y 26 (170)
++..++|++..||..+.++..|.+.
T Consensus 46 ~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 46 SGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred hCCCCcCEEEECCEEEecHHHHHHh
Confidence 5677999999999999999887654
No 116
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=80.38 E-value=2.7 Score=23.07 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=17.9
Q ss_pred CCCCCCCeeEeCCeEE--eehHHHHHHH
Q 030871 2 QPFGELPVIQDGDFIL--YESRAIMRYY 27 (170)
Q Consensus 2 ~P~g~vP~l~~~~~~i--~es~~I~~yl 27 (170)
++...+|++.++|..+ .+...|.++|
T Consensus 46 ~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 46 LGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred hCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 4567899999888776 4555555444
No 117
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=80.36 E-value=0.64 Score=29.26 Aligned_cols=29 Identities=34% Similarity=0.654 Sum_probs=13.9
Q ss_pred CCCCCeeEe--CCeEEeehHHHHHHHHHHhc
Q 030871 4 FGELPVIQD--GDFILYESRAIMRYYAEKYR 32 (170)
Q Consensus 4 ~g~vP~l~~--~~~~i~es~~I~~yl~~~~~ 32 (170)
-..-|.|.+ +|+.+.|..||++|+.+-|.
T Consensus 33 d~~~~~L~~~~~gF~L~e~NAIvrYl~nDF~ 63 (122)
T PF09635_consen 33 DESGPLLKDKKSGFELFEPNAIVRYLANDFE 63 (122)
T ss_dssp S--S--EEE-S--S----HHHHHHHHTT--T
T ss_pred ccccceeeecCCceEEecccHHHHHHHhhcC
Confidence 344577854 56889999999999998885
No 118
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=76.69 E-value=2.5 Score=23.14 Aligned_cols=19 Identities=26% Similarity=0.312 Sum_probs=15.2
Q ss_pred CCCCCCCeeEeCCeEEeeh
Q 030871 2 QPFGELPVIQDGDFILYES 20 (170)
Q Consensus 2 ~P~g~vP~l~~~~~~i~es 20 (170)
||.+.+|++.++|..+.+.
T Consensus 46 ~~~~~vP~i~~~~~~i~g~ 64 (73)
T cd02976 46 NGYRSVPVVVIGDEHLSGF 64 (73)
T ss_pred cCCcccCEEEECCEEEecC
Confidence 6788999999988766553
No 119
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=75.91 E-value=2.7 Score=29.59 Aligned_cols=59 Identities=12% Similarity=0.149 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhcChhHH
Q 030871 94 GKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWK 159 (170)
Q Consensus 94 ~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~ 159 (170)
...+..++..|.++.|..|.+++-+|+.+|..+.- -+. - ..++|..+|+..+.+.-+..
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~---ep~---s-~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGV---EPQ---S-ARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhccc---Ccc---h-hhhhHHHHHHHHHHHHHHHH
Confidence 45788899999999999999999999986655432 111 1 56788889998887754443
No 120
>PF11732 Thoc2: Transcription- and export-related complex subunit; InterPro: IPR021726 The THO/TREX complex is the transcription- and export-related complex associated with spliceosomes that preferentially deal with spliced mRNAs as opposed to unspliced mRNAs. Thoc2 plays a role in RNA polymerase II (RNA pol II)-dependent transcription and is required for the stability of DNA repeats []. In humans, the TRE complex is comprised of the exon-junction-associated proteins Aly/REF and UAP56 together with the THO proteins THOC1 (hHpr1/p84), Thoc2 (hRlr1), THOC3 (hTex1), THOC5 (fSAP79), THOC6 (fSAP35), and THOC7 (fSAP24). Although much evidence indicates that the function of the TREX complex as an adaptor between the mRNA and components of the export machinery is conserved among eukaryotes, in Drosophila the majority of mRNAs can be exported from the nucleus independently of the THO complex []. This entry represents a conserved domain found towards the N terminus of these proteins.
Probab=70.50 E-value=8.3 Score=22.30 Aligned_cols=36 Identities=17% Similarity=0.308 Sum_probs=27.0
Q ss_pred hhhhhhhhHhhhcCCccccccccCCccHHHHHHHHhc
Q 030871 118 ADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISN 154 (170)
Q Consensus 118 aDi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 154 (170)
=|+..|+.+.++....+...- +.--++..|++++.+
T Consensus 42 ~DvL~~~ll~~L~~~~r~~~k-~dg~~~s~Wlq~Las 77 (77)
T PF11732_consen 42 YDVLTFCLLERLSNPGRSRLK-DDGTNISQWLQSLAS 77 (77)
T ss_pred HHHHHHHHHHHHhcccchhcC-cCCCCHHHHHHHHhC
Confidence 388889999988865554444 566899999998753
No 121
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=68.89 E-value=6.5 Score=24.35 Aligned_cols=26 Identities=8% Similarity=0.308 Sum_probs=21.8
Q ss_pred CCeeE-eCCeEEeehHHHHHHHHHHhc
Q 030871 7 LPVIQ-DGDFILYESRAIMRYYAEKYR 32 (170)
Q Consensus 7 vP~l~-~~~~~i~es~~I~~yl~~~~~ 32 (170)
+|.+. .+|.++++|..|+++..+.+.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 46665 688999999999999988875
No 122
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=64.07 E-value=11 Score=20.88 Aligned_cols=22 Identities=18% Similarity=0.175 Sum_probs=19.4
Q ss_pred CCCeeEeCCeEEeehHHHHHHH
Q 030871 6 ELPVIQDGDFILYESRAIMRYY 27 (170)
Q Consensus 6 ~vP~l~~~~~~i~es~~I~~yl 27 (170)
.+|++..+|..+.+...+.++-
T Consensus 51 ~vP~v~i~g~~igg~~~~~~~~ 72 (75)
T cd03418 51 TVPQIFIGDVHIGGCDDLYALE 72 (75)
T ss_pred ccCEEEECCEEEeChHHHHHHH
Confidence 7999999999999988887764
No 123
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=62.69 E-value=9.9 Score=21.19 Aligned_cols=24 Identities=8% Similarity=-0.038 Sum_probs=18.5
Q ss_pred CCCCCCCeeEeCCeEEeehHHHHH
Q 030871 2 QPFGELPVIQDGDFILYESRAIMR 25 (170)
Q Consensus 2 ~P~g~vP~l~~~~~~i~es~~I~~ 25 (170)
++..++|++..||..|.......+
T Consensus 47 ~g~~~vP~v~i~~~~iGg~~~~~~ 70 (73)
T cd03027 47 TGSSVVPQIFFNEKLVGGLTDLKS 70 (73)
T ss_pred hCCCCcCEEEECCEEEeCHHHHHh
Confidence 567899999999988877655443
No 124
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=59.99 E-value=14 Score=20.82 Aligned_cols=26 Identities=12% Similarity=0.082 Sum_probs=21.0
Q ss_pred CCCCCeeEeCCeEEeehHHHHHHHHH
Q 030871 4 FGELPVIQDGDFILYESRAIMRYYAE 29 (170)
Q Consensus 4 ~g~vP~l~~~~~~i~es~~I~~yl~~ 29 (170)
...+|++..+|..+.++..|.++..+
T Consensus 51 ~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 51 QRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred CCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 34789999899889998888887754
No 125
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=55.89 E-value=20 Score=20.27 Aligned_cols=24 Identities=13% Similarity=0.167 Sum_probs=16.2
Q ss_pred CCCCeeEeCCeEEeehHHHHHHHH
Q 030871 5 GELPVIQDGDFILYESRAIMRYYA 28 (170)
Q Consensus 5 g~vP~l~~~~~~i~es~~I~~yl~ 28 (170)
..+|.+..+|..+.++..++++..
T Consensus 53 ~~vP~v~i~g~~igg~~~~~~~~~ 76 (84)
T TIGR02180 53 RTVPNIFINGKFIGGCSDLLALYK 76 (84)
T ss_pred CCCCeEEECCEEEcCHHHHHHHHH
Confidence 467777777777777766666553
No 126
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=47.93 E-value=29 Score=19.51 Aligned_cols=25 Identities=16% Similarity=0.076 Sum_probs=19.2
Q ss_pred CCCCCeeEeCCeEEeehHHHHHHHH
Q 030871 4 FGELPVIQDGDFILYESRAIMRYYA 28 (170)
Q Consensus 4 ~g~vP~l~~~~~~i~es~~I~~yl~ 28 (170)
...+|++..+|..+.+...+.++-.
T Consensus 47 ~~~vP~i~i~g~~igg~~~~~~~~~ 71 (79)
T TIGR02181 47 RRTVPQIFIGDVHVGGCDDLYALDR 71 (79)
T ss_pred CCCcCEEEECCEEEcChHHHHHHHH
Confidence 4578999999988888777766554
No 127
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=47.87 E-value=27 Score=17.87 Aligned_cols=22 Identities=18% Similarity=0.592 Sum_probs=15.5
Q ss_pred cHHHHHHHHhcChhHHHHHHhc
Q 030871 144 HVSAWWDDISNRPSWKKVLELC 165 (170)
Q Consensus 144 ~l~~w~~~~~~~p~~~~~~~~~ 165 (170)
.+.++++++.+.|.+++-++..
T Consensus 5 ~l~~Fl~~~~~d~~l~~~l~~~ 26 (49)
T PF07862_consen 5 SLKAFLEKVKSDPELREQLKAC 26 (49)
T ss_pred HHHHHHHHHhcCHHHHHHHHhc
Confidence 4677777777777777766654
No 128
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=44.51 E-value=40 Score=16.52 Aligned_cols=25 Identities=24% Similarity=0.351 Sum_probs=18.3
Q ss_pred CCCCCeeEeCCeEEeehHHHHHHHH
Q 030871 4 FGELPVIQDGDFILYESRAIMRYYA 28 (170)
Q Consensus 4 ~g~vP~l~~~~~~i~es~~I~~yl~ 28 (170)
.|.+|....++..+.....|.+|+.
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 24 EGELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred cCCCCeEEeCCeEEEeHHHHHHHHh
Confidence 3677877767777777788877764
No 129
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=43.07 E-value=46 Score=19.12 Aligned_cols=24 Identities=13% Similarity=-0.038 Sum_probs=16.9
Q ss_pred CCCCCCeeEeCCeEEeehHHHHHH
Q 030871 3 PFGELPVIQDGDFILYESRAIMRY 26 (170)
Q Consensus 3 P~g~vP~l~~~~~~i~es~~I~~y 26 (170)
+..+||++..||..+.....+.++
T Consensus 50 g~~tvP~I~i~~~~igg~~d~~~~ 73 (80)
T COG0695 50 GQRTVPQIFIGGKHVGGCDDLDAL 73 (80)
T ss_pred CCCCcCEEEECCEEEeCcccHHHH
Confidence 567899999999776654444443
No 130
>PRK10329 glutaredoxin-like protein; Provisional
Probab=39.20 E-value=38 Score=19.53 Aligned_cols=16 Identities=38% Similarity=0.644 Sum_probs=12.5
Q ss_pred CCCCCCeeEeCCeEEe
Q 030871 3 PFGELPVIQDGDFILY 18 (170)
Q Consensus 3 P~g~vP~l~~~~~~i~ 18 (170)
+..+||+++.++..+.
T Consensus 47 g~~~vPvv~i~~~~~~ 62 (81)
T PRK10329 47 GFRQLPVVIAGDLSWS 62 (81)
T ss_pred CCCCcCEEEECCEEEe
Confidence 5679999998886654
No 131
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=34.47 E-value=89 Score=24.00 Aligned_cols=103 Identities=19% Similarity=0.133 Sum_probs=56.6
Q ss_pred CeeEeCCeEEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHH----HhhcccCCCCCH
Q 030871 8 PVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQL----LFSSKFGRPVDE 83 (170)
Q Consensus 8 P~l~~~~~~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 83 (170)
+.+.+.++.+.|+.+|..-|...-.. -.-+-+..++.++-.|+......-...-....+.. .+... |...++
T Consensus 99 ~~~~~~dQ~~VEaa~la~aL~~a~~~---lW~~L~~~~k~~l~~wL~~~~~~~~~~nNW~lF~v~v~~~L~~~-G~~~d~ 174 (361)
T PF10022_consen 99 GFIGDYDQRLVEAASLALALLRAPEW---LWDPLDEEEKENLVDWLKQIRGIKPPDNNWLLFRVMVEAFLKKV-GEEYDE 174 (361)
T ss_pred CCcccchhhHhHHHHHHHHHHHCHHH---HHhhCCHHHHHHHHHHHHhcCcCCCccchhHHHHHHHHHHHHHc-CCCCcH
Confidence 33445568889999988877654321 13345777888888888765544332222222211 11111 333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccc-CCCccHhhhhh
Q 030871 84 KLVKESDEKLGKTLDVYEERLSKSKYLA-GDFFSLADLSH 122 (170)
Q Consensus 84 ~~~~~~~~~~~~~l~~le~~L~~~~fl~-G~~~t~aDi~l 122 (170)
..+...|+.+|+.-.+.+|+. |. -.-.|-+.
T Consensus 175 -------~~i~~~l~~~e~~Y~GdGWY~DG~-~~~~DYYn 206 (361)
T PF10022_consen 175 -------ERIDYDLERIEEWYLGDGWYSDGP-EFQFDYYN 206 (361)
T ss_pred -------HHHHHHHHHHHHHhccCCccccCC-ccCCcchH
Confidence 566778888888655555544 43 23455544
No 132
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=34.04 E-value=71 Score=18.67 Aligned_cols=24 Identities=4% Similarity=0.048 Sum_probs=19.0
Q ss_pred CCCCCeeEeCCeEEeehHHHHHHH
Q 030871 4 FGELPVIQDGDFILYESRAIMRYY 27 (170)
Q Consensus 4 ~g~vP~l~~~~~~i~es~~I~~yl 27 (170)
..++|.+..||..|.+...+....
T Consensus 61 ~~tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 61 WPTFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred CCCCCEEEECCEEEeCHHHHHHHH
Confidence 347999999999888887776643
No 133
>PF12622 NpwBP: mRNA biogenesis factor
Probab=33.93 E-value=23 Score=18.38 Aligned_cols=10 Identities=30% Similarity=0.664 Sum_probs=6.8
Q ss_pred CCCCCCCCee
Q 030871 1 MQPFGELPVI 10 (170)
Q Consensus 1 ~~P~g~vP~l 10 (170)
+||+|..|--
T Consensus 11 ~NP~G~~P~g 20 (48)
T PF12622_consen 11 LNPLGKPPPG 20 (48)
T ss_pred cCCCCCCCCC
Confidence 4777777654
No 134
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=32.24 E-value=28 Score=19.13 Aligned_cols=18 Identities=11% Similarity=0.058 Sum_probs=12.7
Q ss_pred CCCCCCeeEe-CCeEEeeh
Q 030871 3 PFGELPVIQD-GDFILYES 20 (170)
Q Consensus 3 P~g~vP~l~~-~~~~i~es 20 (170)
+...+|++.. +|..+.+.
T Consensus 48 ~~~~vP~i~~~~g~~l~~~ 66 (77)
T TIGR02200 48 GNMTVPTVKFADGSFLTNP 66 (77)
T ss_pred CCceeCEEEECCCeEecCC
Confidence 6789999974 56666543
No 135
>PF09849 DUF2076: Uncharacterized protein conserved in bacteria (DUF2076); InterPro: IPR018648 This family of hypothetical prokaryotic proteins has no known function but includes putative perimplasmic ligand-binding sensor proteins.
Probab=31.03 E-value=2.1e+02 Score=20.77 Aligned_cols=67 Identities=15% Similarity=0.170 Sum_probs=36.2
Q ss_pred ehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHH
Q 030871 19 ESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLD 98 (170)
Q Consensus 19 es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 98 (170)
|-..|-..+.++.... .-|+++...+.|..-+...=+-. +.+. ...-..+.+++.+...++
T Consensus 5 E~qLI~~lf~RL~~ae---~~prD~eAe~lI~~~~~~qP~A~----Y~la------------Q~vlvQE~AL~~a~~ri~ 65 (247)
T PF09849_consen 5 ERQLIDDLFSRLKQAE---AQPRDPEAEALIAQALARQPDAP----YYLA------------QTVLVQEQALKQAQARIQ 65 (247)
T ss_pred HHHHHHHHHHHHHhcc---CCCCCHHHHHHHHHHHHhCCchH----HHHH------------HHHHHHHHHHHHHHHHHH
Confidence 3445555666655431 22777766666665544211111 1111 111245677788888888
Q ss_pred HHHHHh
Q 030871 99 VYEERL 104 (170)
Q Consensus 99 ~le~~L 104 (170)
.||..|
T Consensus 66 eLe~ql 71 (247)
T PF09849_consen 66 ELEAQL 71 (247)
T ss_pred HHHHHH
Confidence 888887
No 136
>PF12728 HTH_17: Helix-turn-helix domain
Probab=30.32 E-value=82 Score=15.91 Aligned_cols=25 Identities=16% Similarity=0.288 Sum_probs=18.5
Q ss_pred CCCCeeEeCCeEEeehHHHHHHHHH
Q 030871 5 GELPVIQDGDFILYESRAIMRYYAE 29 (170)
Q Consensus 5 g~vP~l~~~~~~i~es~~I~~yl~~ 29 (170)
|.+|....++.....-..|.+|+.+
T Consensus 25 g~i~~~~~g~~~~~~~~~l~~~~~~ 49 (51)
T PF12728_consen 25 GKIPPFKIGRKWRIPKSDLDRWLER 49 (51)
T ss_pred CCCCeEEeCCEEEEeHHHHHHHHHh
Confidence 5677777667777777888888765
No 137
>TIGR03798 ocin_TIGR03798 bacteriocin propeptide, TIGR03798 family. This model describes a conserved, fairly long (about 65 residue) propeptide region for a family of putative microcins, that is, bacteriocins of small size. Members of the seed alignment tend to have the Gly-Gly motif as the last two residues of the matched region. This is a cleavage site for a combination processing/export ABC transporter with a peptidase domain.
Probab=29.64 E-value=70 Score=17.46 Aligned_cols=22 Identities=14% Similarity=0.453 Sum_probs=16.0
Q ss_pred ccHHHHHHHHhcChhHHHHHHh
Q 030871 143 KHVSAWWDDISNRPSWKKVLEL 164 (170)
Q Consensus 143 p~l~~w~~~~~~~p~~~~~~~~ 164 (170)
..+.++++++.+.|.+++-+..
T Consensus 2 e~l~~Fl~~~~~d~~L~~~l~~ 23 (64)
T TIGR03798 2 EQLKAFLEKVKTDPDLREKLKA 23 (64)
T ss_pred HHHHHHHHHHHcCHHHHHHHHH
Confidence 3567788888888877776655
No 138
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=29.19 E-value=99 Score=18.55 Aligned_cols=24 Identities=13% Similarity=0.108 Sum_probs=16.7
Q ss_pred CCCCCCeeEeCCeEEeehHHHHHH
Q 030871 3 PFGELPVIQDGDFILYESRAIMRY 26 (170)
Q Consensus 3 P~g~vP~l~~~~~~i~es~~I~~y 26 (170)
...++|++..+|..|.+...+...
T Consensus 58 g~~tvP~Vfi~g~~iGG~ddl~~l 81 (99)
T TIGR02189 58 CSPAVPAVFVGGKLVGGLENVMAL 81 (99)
T ss_pred CCCCcCeEEECCEEEcCHHHHHHH
Confidence 345788888888877776665543
No 139
>COG3646 Uncharacterized phage-encoded protein [Function unknown]
Probab=28.92 E-value=40 Score=22.70 Aligned_cols=25 Identities=24% Similarity=0.383 Sum_probs=20.6
Q ss_pred eeEeCCeEEeehHHHHHHHHHHhcc
Q 030871 9 VIQDGDFILYESRAIMRYYAEKYRS 33 (170)
Q Consensus 9 ~l~~~~~~i~es~~I~~yl~~~~~~ 33 (170)
+|..++.++++|..|+++.++++++
T Consensus 6 vi~~N~~i~t~S~~IAe~~gkrH~~ 30 (167)
T COG3646 6 VIDSNKLIVTNSREIAEMVGKRHDN 30 (167)
T ss_pred HhhcCCceeecHHHHHHHHhhhhhh
Confidence 4455677999999999999999864
No 140
>PRK15371 effector protein YopJ; Provisional
Probab=27.36 E-value=2.6e+02 Score=20.79 Aligned_cols=45 Identities=16% Similarity=0.285 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcCC
Q 030871 87 KESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGP 132 (170)
Q Consensus 87 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~~ 132 (170)
....+.+...++.||..++++.|+. +.++..|+-+.|.+......
T Consensus 22 ~~~~~~L~~~i~~le~~~~~G~~~~-~~~~~~Di~~lp~lv~~~N~ 66 (287)
T PRK15371 22 EISNEELKNIITQLEDDIADGSWIH-KNYARTDLEVMPALVAQANN 66 (287)
T ss_pred hhhHHHHHHHHHHHHHHHHcCCCCC-chhHHhhHHhhHHHHHHHhc
Confidence 3567778999999999999988884 56899999999988876643
No 141
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=26.73 E-value=96 Score=16.66 Aligned_cols=26 Identities=19% Similarity=0.293 Sum_probs=17.8
Q ss_pred HHHHHHHHhcCCCcccCCCc-cHhhhh
Q 030871 96 TLDVYEERLSKSKYLAGDFF-SLADLS 121 (170)
Q Consensus 96 ~l~~le~~L~~~~fl~G~~~-t~aDi~ 121 (170)
..+.|.+.+..+.|-.|+.+ |..+++
T Consensus 5 i~~~l~~~I~~g~~~~g~~lps~~~la 31 (64)
T PF00392_consen 5 IYDQLRQAILSGRLPPGDRLPSERELA 31 (64)
T ss_dssp HHHHHHHHHHTTSS-TTSBE--HHHHH
T ss_pred HHHHHHHHHHcCCCCCCCEeCCHHHHH
Confidence 45566777777788888887 888875
No 142
>PF09098 Dehyd-heme_bind: Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding; InterPro: IPR015182 Quinohemoprotein amine dehydrogenases (QHNDH) 1.4.99 from EC) are enzymes produced in the periplasmic space of certain Gram-negative bacteria, such as Paracoccus denitrificans and Pseudomonas putida, in response to primary amines, including n-butylamine and benzylamine. QHNDH catalyses the oxidative deamination of a wide range of aliphatic and aromatic amines through formation of a Schiff-base intermediate involving one of the quinone O atoms []. Catalysis requires the presence of a novel redox cofactor, cysteine tryptophylquinone (CTQ). CTQ is derived from the post-translational modification of specific residues, which involves the oxidation of the indole ring of a tryptophan residue to form tryptophylquinone, followed by covalent cross-linking with a cysteine residue []. There is one CTQ per subunit in QHNDH. In addition to CTQ, two haem c cofactors are present in QHNDH that mediate the transfer of the substrate-derived electrons from CTQ to an external electron acceptor, cytochrome c-550 [, ]. QHNDH is a heterotrimer of alpha, beta and gamma subunits. The alpha and beta subunits contain signal peptides necessary for the translocation of QHNDH to the periplasm. The alpha subunit is composed of four domains - domain 1 forming a dihaem cytochrome, and domains 2-4 forming antiparallel beta-barrel structures; the beta subunit is a 7-bladed beta-propeller that provides part of the active site; and the small, catalytic gamma subunit contains the novel cross-linked CTQ cofactor, in addition to additional thioester cross-links between Cys and Asp/Glu residues that encage CTQ. The gamma subunit assumes a globular secondary structure with two short alpha-helices having many turns and bends []. This entry represents the dihaem cytochrome c domain of the QHNDH alpha subunit. The domain contain two cysteine residues that are involved in thioether linkages to haem []. ; PDB: 1PBY_A 1JJU_A 1JMZ_A 1JMX_A.
Probab=25.54 E-value=50 Score=22.19 Aligned_cols=15 Identities=33% Similarity=0.567 Sum_probs=12.2
Q ss_pred eehHHHHHHHHHHhc
Q 030871 18 YESRAIMRYYAEKYR 32 (170)
Q Consensus 18 ~es~~I~~yl~~~~~ 32 (170)
.|-.+|++||++.+|
T Consensus 54 eer~avVkYLAd~~G 68 (167)
T PF09098_consen 54 EERRAVVKYLADTQG 68 (167)
T ss_dssp HHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHccC
Confidence 356899999999997
No 143
>PHA03050 glutaredoxin; Provisional
Probab=24.51 E-value=1.2e+02 Score=18.68 Aligned_cols=22 Identities=14% Similarity=0.043 Sum_probs=17.6
Q ss_pred CCCCCeeEeCCeEEeehHHHHH
Q 030871 4 FGELPVIQDGDFILYESRAIMR 25 (170)
Q Consensus 4 ~g~vP~l~~~~~~i~es~~I~~ 25 (170)
..+||.+..||..|.....+..
T Consensus 67 ~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 67 GRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred CCCcCEEEECCEEEeChHHHHH
Confidence 3589999999998888766655
No 144
>PHA00728 hypothetical protein
Probab=23.72 E-value=2e+02 Score=18.21 Aligned_cols=10 Identities=50% Similarity=0.850 Sum_probs=7.2
Q ss_pred cccCCCccHh
Q 030871 109 YLAGDFFSLA 118 (170)
Q Consensus 109 fl~G~~~t~a 118 (170)
|+.|+++|+.
T Consensus 65 YLsgnqisLI 74 (151)
T PHA00728 65 YLSGNQISLI 74 (151)
T ss_pred EecCCchhhH
Confidence 7778877764
No 145
>PRK13916 plasmid segregation protein ParR; Provisional
Probab=22.33 E-value=84 Score=18.46 Aligned_cols=28 Identities=11% Similarity=0.308 Sum_probs=18.5
Q ss_pred cCCccHHHHHHHHhc-------ChhHHHHHHhcCC
Q 030871 140 RDRKHVSAWWDDISN-------RPSWKKVLELCKT 167 (170)
Q Consensus 140 ~~~p~l~~w~~~~~~-------~p~~~~~~~~~~~ 167 (170)
+.+|.+..|+.++-. |..+++++++.++
T Consensus 15 ~~~~~iF~FL~~~P~GT~~~~iR~~L~rYI~~~G~ 49 (97)
T PRK13916 15 EDYPQIFDFLENVPRGTKTAHIREALRRYIEEIGE 49 (97)
T ss_pred cccHHHHHHHHHCCCCCccHHHHHHHHHHHHhcCC
Confidence 667777777777654 4566666666554
No 146
>PF03421 YopJ: YopJ Serine/Threonine acetyltransferase; InterPro: IPR005083 The infection of mammalian host cells by Yersinia sp. causes a rapid induction of the mitogen-activated protein kinase (MAPK; including the ERK, JNK and p38 pathways) and nuclear factor kappaB (NF-kappaB) signalling pathways that would typically result in cytokine production and initiation of the innate immune response. However, these pathways are rapidly inhibited promoting apoptosis. YopJ has been shown to block phosphorylation of active site residues []. It has also been shown that YopJ acetyltransferase is activated by eukaryotic host cell inositol hexakisphosphate []. Serine and threonine acetylation is yet another complication to the control of signalling pathways and may be a may be a widespread mode of biochemical regulation of endogenous processes in eukaryotic cells. It has been shown that YopJ is a serine/threonine acetyltransferase []. It acetylates the serine and threonine residues in the phosphorylation sites of MAPK kinases and nuclear factor kappaB, preventing their activation by phosphorylation and the inhibition of these signalling pathways []. This entry contains YopJ and related proteins.
Probab=22.20 E-value=2.6e+02 Score=18.99 Aligned_cols=40 Identities=13% Similarity=0.253 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHhcCCCcccCCCccHhhhhhhhhHhhhcC
Q 030871 91 EKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVG 131 (170)
Q Consensus 91 ~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~l~~~~~ 131 (170)
+.+....+.+++.+.++.|+ .+.++..|+.+.|.+.....
T Consensus 2 ~~L~~y~~~~~~~~~~g~~~-~~~~~~~D~~~lp~lv~~~N 41 (177)
T PF03421_consen 2 ESLKEYIERLEDDIKNGSWP-NESYAELDIKMLPALVAAEN 41 (177)
T ss_pred hHHHHHHHHHHHHHHhCCCC-CcchhhhhHHHHHHHHHHHh
Confidence 35677888899999999888 56799999999888877664
No 147
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=21.28 E-value=60 Score=21.19 Aligned_cols=21 Identities=10% Similarity=0.521 Sum_probs=16.6
Q ss_pred cCCccHHHHHHHHhcChhHHH
Q 030871 140 RDRKHVSAWWDDISNRPSWKK 160 (170)
Q Consensus 140 ~~~p~l~~w~~~~~~~p~~~~ 160 (170)
...-.|.+|+++|.++|-+..
T Consensus 109 ~rr~~LqrfL~RV~~hP~L~~ 129 (140)
T cd06891 109 KLKANLQRWFNRVCSDPILIR 129 (140)
T ss_pred HHHHHHHHHHHHHhCChhhcc
Confidence 345679999999999986654
No 148
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=21.17 E-value=1.5e+02 Score=17.69 Aligned_cols=21 Identities=14% Similarity=0.101 Sum_probs=14.1
Q ss_pred CCCCeeEeCCeEEeehHHHHH
Q 030871 5 GELPVIQDGDFILYESRAIMR 25 (170)
Q Consensus 5 g~vP~l~~~~~~i~es~~I~~ 25 (170)
.++|.+..||..|.+...+..
T Consensus 66 ~tvP~vfi~g~~iGG~ddl~~ 86 (97)
T TIGR00365 66 PTIPQLYVKGEFVGGCDIIME 86 (97)
T ss_pred CCCCEEEECCEEEeChHHHHH
Confidence 467777777777666655554
No 149
>TIGR03396 PC_PLC phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream.
Probab=21.01 E-value=1.3e+02 Score=25.43 Aligned_cols=29 Identities=10% Similarity=0.399 Sum_probs=23.7
Q ss_pred CCCCCeeEe-----CC---eEEeehHHHHHHHHHHhc
Q 030871 4 FGELPVIQD-----GD---FILYESRAIMRYYAEKYR 32 (170)
Q Consensus 4 ~g~vP~l~~-----~~---~~i~es~~I~~yl~~~~~ 32 (170)
..+||.++. +| ....|...|+++|+++++
T Consensus 389 G~RVP~iVISPwsrgG~V~s~~~DHtSvLrflE~~fg 425 (690)
T TIGR03396 389 GPRVPMYVISPWSKGGWVNSQVFDHTSVLRFLEKRFG 425 (690)
T ss_pred cceeeEEEECCCCCCCcccCccccHHHHHHHHHHHhC
Confidence 348999986 23 347899999999999997
No 150
>cd08540 SAM_PNT-ERG Sterile alpha motif (SAM)/Pointed domain of ERG transcription factor. SAM Pointed domain of ERG subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It may participate in formation of homodimers or heterodimers with ETS-2, Fli-1, ER81, and Pu-1. However, dimeric forms are inactive and SAM Pointed domain is not essential for dimerization, since ER81 and Pu-1 do not have it. In mouse, a regulator of this type binds the ESET histone H3-specific methyltransferase (human homolog is SETDB1), followed by modification of local chromatin structure through histone methylation. ERG regulators are involved in endothelial cell differentiation, bone morphogenesis and neural crest development. The Erg gene is a proto-oncogene. It is a target of chromosomal translocations resulting in fusions with new neighboring genes. Chimeric proteins were found in solid tumors such as myeloid leukemia or Ewing's sarcoma. Members of this subfamily are po
Probab=20.63 E-value=1.6e+02 Score=16.90 Aligned_cols=23 Identities=26% Similarity=0.345 Sum_probs=16.6
Q ss_pred CCCHHH--HHHHHHHHHHHHhhhch
Q 030871 40 GKTIEE--RGLVEQWLEVEAHNYNP 62 (170)
Q Consensus 40 ~~~~~~--~~~~~~~~~~~~~~~~~ 62 (170)
|.+|.+ +..|..|+.|+...+..
T Consensus 2 P~DP~~Wt~~~V~~WL~Wa~~ef~L 26 (75)
T cd08540 2 PADPTLWSTDHVRQWLEWAVKEYGL 26 (75)
T ss_pred CCChhhcCHHHHHHHHHHHHHHhCC
Confidence 455544 78899999998876643
No 151
>COG5625 Predicted transcription regulator containing HTH domain [Transcription]
Probab=20.44 E-value=2.1e+02 Score=17.60 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=26.9
Q ss_pred HhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHhcC
Q 030871 72 LFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSK 106 (170)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~ 106 (170)
|....+.....++..++..+.+.+.++.+|+.+++
T Consensus 75 WvGYiya~~~P~k~leei~~~i~keiEelEk~~k~ 109 (113)
T COG5625 75 WVGYIYATTPPPKPLEEIEEEIMKEIEELEKEFKN 109 (113)
T ss_pred ceeeEecCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444455667788889999999999999998875
No 152
>COG3738 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.32 E-value=1.2e+02 Score=20.47 Aligned_cols=33 Identities=15% Similarity=0.258 Sum_probs=21.0
Q ss_pred hhhhhHhhhcCCccccccccCCccHHHHHHHHhc
Q 030871 121 SHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISN 154 (170)
Q Consensus 121 ~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 154 (170)
..||-.+-+... ...+.+...|||..|+.|-..
T Consensus 98 ~aYP~~Wglk~p-D~NIDHRRVpNLet~f~Rq~k 130 (200)
T COG3738 98 AAYPQKWGLKRP-DSNIDHRRVPNLETWFQRQDK 130 (200)
T ss_pred HhChHhhCCCCC-CCCCcccccccHHHHHHhhcc
Confidence 344533333332 234666889999999999765
No 153
>PF05278 PEARLI-4: Arabidopsis phospholipase-like protein (PEARLI 4); InterPro: IPR007942 This family contains several phospholipase-like proteins from Arabidopsis thaliana and other members of the Streptophyta which are homologous to PEARLI 4.
Probab=20.15 E-value=3.7e+02 Score=19.85 Aligned_cols=49 Identities=12% Similarity=0.029 Sum_probs=34.7
Q ss_pred eeEeCCe-EEeehHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHH
Q 030871 9 VIQDGDF-ILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEA 57 (170)
Q Consensus 9 ~l~~~~~-~i~es~~I~~yl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 57 (170)
.+..||. +......|++.|.++||+...+....+...++.....+-.+.
T Consensus 86 ~V~VngY~Vk~S~~silq~If~KHGDIAsNc~lkS~~~RS~yLe~Lc~II 135 (269)
T PF05278_consen 86 IVSVNGYQVKPSQVSILQKIFEKHGDIASNCKLKSQQFRSYYLECLCDII 135 (269)
T ss_pred eeeECCEEEcHhHHHHHHHHHHhCccHhhccccCcHHHHHHHHHHHHHHH
Confidence 4556784 567788999999999998776666667766666554444333
Done!