Your job contains 1 sequence.
>030876
MAISTSTVSSSNLLSFSSTLGSSRIHRSSLMSFHNHQQTSNGRLVVNCCSSSDMGSAQNP
TNGRQPQMSSMSPFGVTLNDNGMSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAR
EVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGYFLLILID
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030876
(170 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2093949 - symbol:AT3G18680 species:3702 "Arabi... 378 6.5e-35 1
TIGR_CMR|CHY_1785 - symbol:CHY_1785 "uridylate kinase" sp... 210 4.1e-17 1
TIGR_CMR|GSU_1919 - symbol:GSU_1919 "uridylate kinase" sp... 210 4.1e-17 1
TAIR|locus:2100108 - symbol:AT3G10030 species:3702 "Arabi... 213 1.5e-16 1
TIGR_CMR|BA_3963 - symbol:BA_3963 "uridylate kinase" spec... 200 4.7e-16 1
TIGR_CMR|SPO_1662 - symbol:SPO_1662 "uridylate kinase" sp... 194 2.0e-15 1
TIGR_CMR|DET_0375 - symbol:DET_0375 "uridylate kinase" sp... 192 3.3e-15 1
TIGR_CMR|CPS_1555 - symbol:CPS_1555 "uridylate kinase" sp... 189 6.9e-15 1
TIGR_CMR|SO_1631 - symbol:SO_1631 "uridylate kinase" spec... 187 1.1e-14 1
TIGR_CMR|VC_2258 - symbol:VC_2258 "uridylate kinase" spec... 186 1.4e-14 1
TIGR_CMR|CBU_1384 - symbol:CBU_1384 "uridylate kinase" sp... 185 1.8e-14 1
TIGR_CMR|ECH_0266 - symbol:ECH_0266 "uridylate kinase" sp... 180 6.2e-14 1
UNIPROTKB|P0A7E9 - symbol:pyrH "PyrH" species:83333 "Esch... 177 1.3e-13 1
UNIPROTKB|P65929 - symbol:pyrH "Uridylate kinase" species... 168 1.2e-12 1
TIGR_CMR|APH_0111 - symbol:APH_0111 "uridylate kinase" sp... 168 1.2e-12 1
TIGR_CMR|CJE_1410 - symbol:CJE_1410 "uridylate kinase" sp... 162 5.0e-12 1
TIGR_CMR|BA_1797 - symbol:BA_1797 "uridylate kinase" spec... 161 6.4e-12 1
TIGR_CMR|NSE_0946 - symbol:NSE_0946 "uridylate kinase" sp... 157 1.7e-11 1
>TAIR|locus:2093949 [details] [associations]
symbol:AT3G18680 species:3702 "Arabidopsis thaliana"
[GO:0006221 "pyrimidine nucleotide biosynthetic process"
evidence=IEA;ISS] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0033862 "UMP kinase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0006399 "tRNA metabolic process"
evidence=RCA] [GO:0009073 "aromatic amino acid family biosynthetic
process" evidence=RCA] [GO:0009658 "chloroplast organization"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0016226
"iron-sulfur cluster assembly" evidence=RCA] [GO:0045036 "protein
targeting to chloroplast" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008652 EMBL:AB026654
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0006221
UniGene:At.6380 UniGene:At.69640 eggNOG:COG0528
HOGENOM:HOG000047187 KO:K09903 HAMAP:MF_01220_B PANTHER:PTHR26059
TIGRFAMs:TIGR02075 EMBL:AY050828 EMBL:AY091161 IPI:IPI00526120
RefSeq:NP_188498.1 ProteinModelPortal:Q9LSA9 SMR:Q9LSA9
IntAct:Q9LSA9 STRING:Q9LSA9 PaxDb:Q9LSA9 PRIDE:Q9LSA9 ProMEX:Q9LSA9
EnsemblPlants:AT3G18680.1 GeneID:821399 KEGG:ath:AT3G18680
TAIR:At3g18680 OMA:IKGKHSG PhylomeDB:Q9LSA9 ProtClustDB:CLSN2915342
ArrayExpress:Q9LSA9 Genevestigator:Q9LSA9 Uniprot:Q9LSA9
Length = 339
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 84/143 (58%), Positives = 104/143 (72%)
Query: 32 SFHNHQQTSNGRLVVNCCSS--SDMGSAQNPTNGRQ----PQMSSMSPFGVTLNDNGMSK 85
+F ++Q S R++++C SS SD GS+ + NG ++ S F + +G SK
Sbjct: 33 TFFSNQNYSR-RVLISCSSSLSSDNGSSPDSMNGNGNGNGSSLNGQSSFPRLPSFDGTSK 91
Query: 86 PSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGA 145
P KW+RVLLKVSGEALAGD QNIDPK+TMAIAREVA+VTRLGIEVAIVVGGGNIFRG+
Sbjct: 92 PPLKWRRVLLKVSGEALAGDEEQNIDPKVTMAIAREVAAVTRLGIEVAIVVGGGNIFRGS 151
Query: 146 SAAGNSGLDRSSADYIGYFLLIL 168
+ AG SGLDRSSADYIG ++
Sbjct: 152 TWAGCSGLDRSSADYIGMLATVM 174
>TIGR_CMR|CHY_1785 [details] [associations]
symbol:CHY_1785 "uridylate kinase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0009041 "uridylate
kinase activity" evidence=ISS] [GO:0015949 "nucleobase-containing
small molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
RefSeq:YP_360605.1 HSSP:P65938 ProteinModelPortal:Q3AB79 SMR:Q3AB79
STRING:Q3AB79 GeneID:3727662 KEGG:chy:CHY_1785 PATRIC:21276681
BioCyc:CHYD246194:GJCN-1784-MONOMER Uniprot:Q3AB79
Length = 242
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 41/84 (48%), Positives = 63/84 (75%)
Query: 86 PSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTR-LGIEVAIVVGGGNIFRG 144
PS K++RV+LK+SGEALAG+ IDP++ +IA ++A + + GI+VA+VVGGGNI+RG
Sbjct: 2 PSPKYKRVVLKLSGEALAGEKGYGIDPEVVNSIAGQIAEIIKEFGIQVAVVVGGGNIWRG 61
Query: 145 ASAAGNSGLDRSSADYIGYFLLIL 168
S + G+DR++ADY+G ++
Sbjct: 62 LSGSAK-GMDRATADYMGMLATVI 84
>TIGR_CMR|GSU_1919 [details] [associations]
symbol:GSU_1919 "uridylate kinase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P0A7E9 RefSeq:NP_952968.1
ProteinModelPortal:Q74BW2 SMR:Q74BW2 GeneID:2685329
KEGG:gsu:GSU1919 PATRIC:22026703
BioCyc:GSUL243231:GH27-1976-MONOMER Uniprot:Q74BW2
Length = 239
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
M P Y RVLLK+SGEALAGD IDP+ AIA E+ V G ++A+V+GGGNIF
Sbjct: 1 MGTPYYG--RVLLKLSGEALAGDQGYGIDPRTITAIAAEIKEVVATGSQLALVIGGGNIF 58
Query: 143 RGASAAGNSGLDRSSADYIG 162
RG AA + G+DR+SADY+G
Sbjct: 59 RGL-AASSKGMDRASADYMG 77
>TAIR|locus:2100108 [details] [associations]
symbol:AT3G10030 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA;ISS] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001005 InterPro:IPR001048
Pfam:PF00696 SMART:SM00717 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003682 GO:GO:0008652 GO:GO:0016301
Gene3D:3.40.1160.10 SUPFAM:SSF53633 eggNOG:COG0528
HOGENOM:HOG000047187 EMBL:AF375431 EMBL:AY120687 IPI:IPI00535263
RefSeq:NP_566366.1 UniGene:At.28740 ProteinModelPortal:Q94JR1
SMR:Q94JR1 IntAct:Q94JR1 STRING:Q94JR1 PaxDb:Q94JR1 PRIDE:Q94JR1
EnsemblPlants:AT3G10030.1 GeneID:820164 KEGG:ath:AT3G10030
TAIR:At3g10030 InParanoid:Q94JR1 OMA:QINNVKS PhylomeDB:Q94JR1
ProtClustDB:CLSN2684524 Genevestigator:Q94JR1 Uniprot:Q94JR1
Length = 542
Score = 213 (80.0 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 54/121 (44%), Positives = 74/121 (61%)
Query: 50 SSSDMGSAQNPTNGRQPQMSSMSPFGVTLNDNGMSKPSY--KWQRVLLKVSGEALAGDHT 107
S S MG+ P R P + + +P GV +N N SK + +W+RV+LK+SG ALA
Sbjct: 264 SGSSMGNTVKPAR-RYP-LVTYNP-GVQIN-NVKSKATSNPRWRRVVLKISGAALACTGP 319
Query: 108 QNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGYFLLI 167
NIDPK+ IAREVA RLG+EVAIVVG N F G++ +GLDR++A +I +
Sbjct: 320 NNIDPKVINLIAREVAMACRLGVEVAIVVGSRNFFCGSTWVTATGLDRTTAYHISMMASV 379
Query: 168 L 168
+
Sbjct: 380 M 380
>TIGR_CMR|BA_3963 [details] [associations]
symbol:BA_3963 "uridylate kinase" species:198094 "Bacillus
anthracis str. Ames" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
RefSeq:NP_846206.1 RefSeq:YP_020602.2 RefSeq:YP_029927.1
ProteinModelPortal:Q81WL0 SMR:Q81WL0 DNASU:1086816
EnsemblBacteria:EBBACT00000009368 EnsemblBacteria:EBBACT00000014903
EnsemblBacteria:EBBACT00000024399 GeneID:1086816 GeneID:2819541
GeneID:2850619 KEGG:ban:BA_3963 KEGG:bar:GBAA_3963 KEGG:bat:BAS3676
ProtClustDB:PRK00358 BioCyc:BANT260799:GJAJ-3734-MONOMER
BioCyc:BANT261594:GJ7F-3851-MONOMER Uniprot:Q81WL0
Length = 240
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 40/86 (46%), Positives = 57/86 (66%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
MSKP Y RV+LK+SGEALAG+ I+P + ++A +V + L +EVA+VVGGGNI+
Sbjct: 1 MSKPKYN--RVVLKLSGEALAGEQGFGINPAVIKSVAEQVKEIAELDVEVAVVVGGGNIW 58
Query: 143 RGASAAGNSGLDRSSADYIGYFLLIL 168
RG G+DR+ ADY+G ++
Sbjct: 59 RG-KIGSEMGMDRAGADYMGMLATVM 83
>TIGR_CMR|SPO_1662 [details] [associations]
symbol:SPO_1662 "uridylate kinase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P65938 RefSeq:YP_166901.1
ProteinModelPortal:Q5LSV4 GeneID:3192709 KEGG:sil:SPO1662
PATRIC:23376649 Uniprot:Q5LSV4
Length = 251
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 38/86 (44%), Positives = 58/86 (67%)
Query: 84 SKPSY-KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
S PS +++RV+LK+SGEAL GD + P IA E+ +V +G+E+ +V+GGGNIF
Sbjct: 11 SDPSQTRYKRVMLKISGEALMGDQGFGLHPPTVKRIAHEIKTVHDMGVEICMVIGGGNIF 70
Query: 143 RGASAAGNSGLDRSSADYIGYFLLIL 168
RG S A G++R++ADY+G ++
Sbjct: 71 RGLSGAAQ-GMERTTADYMGMLATVM 95
>TIGR_CMR|DET_0375 [details] [associations]
symbol:DET_0375 "uridylate kinase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P65938 RefSeq:YP_181121.1
ProteinModelPortal:Q3Z9H8 STRING:Q3Z9H8 GeneID:3230311
KEGG:det:DET0375 PATRIC:21607819 BioCyc:DETH243164:GJNF-375-MONOMER
Uniprot:Q3Z9H8
Length = 241
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
K++R+LLK+SGEA G ID +IA E+ + +G+EVAIVVGGGNI+RGA+AA
Sbjct: 5 KYKRILLKLSGEAFKGATGYGIDIPTVRSIAHEIKHICLMGVEVAIVVGGGNIWRGATAA 64
Query: 149 GNSGLDRSSADYIGYFLLIL 168
G+DR SADY G I+
Sbjct: 65 -KEGIDRVSADYAGMLATII 83
>TIGR_CMR|CPS_1555 [details] [associations]
symbol:CPS_1555 "uridylate kinase" species:167879
"Colwellia psychrerythraea 34H" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P65938 RefSeq:YP_268297.1
ProteinModelPortal:Q485G8 SMR:Q485G8 STRING:Q485G8 PRIDE:Q485G8
GeneID:3522188 KEGG:cps:CPS_1555 PATRIC:21466317
BioCyc:CPSY167879:GI48-1636-MONOMER Uniprot:Q485G8
Length = 247
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 37/84 (44%), Positives = 57/84 (67%)
Query: 85 KPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRG 144
KP+Y+ R+LLK+SGEAL GD IDPK+ +A+E+ + +GI+V +V+GGGN+FRG
Sbjct: 6 KPAYR--RILLKLSGEALMGDEGFGIDPKVLDRMAQEIKELVEMGIQVGLVIGGGNLFRG 63
Query: 145 ASAAGNSGLDRSSADYIGYFLLIL 168
A A +G++R D +G ++
Sbjct: 64 AGLA-EAGMNRVVGDQMGMLATVM 86
>TIGR_CMR|SO_1631 [details] [associations]
symbol:SO_1631 "uridylate kinase" species:211586
"Shewanella oneidensis MR-1" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P0A7E9 RefSeq:NP_717242.1
ProteinModelPortal:Q8EGH3 SMR:Q8EGH3 GeneID:1169425
KEGG:son:SO_1631 PATRIC:23522896 Uniprot:Q8EGH3
Length = 242
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 37/84 (44%), Positives = 57/84 (67%)
Query: 85 KPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRG 144
KP+++ R+LLK+SGEAL GD IDPK+ +A+EV + LGI+V +V+GGGN+FRG
Sbjct: 6 KPAFR--RILLKLSGEALMGDEGFGIDPKVLDRMAQEVKELVELGIQVGVVIGGGNLFRG 63
Query: 145 ASAAGNSGLDRSSADYIGYFLLIL 168
A +G++R D++G ++
Sbjct: 64 EGLA-KAGMNRVVGDHMGMLATVM 86
>TIGR_CMR|VC_2258 [details] [associations]
symbol:VC_2258 "uridylate kinase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 KO:K09903 OMA:RHMEKGR HAMAP:MF_01220_B
PANTHER:PTHR26059 TIGRFAMs:TIGR02075 ProtClustDB:PRK00358
PIR:H82099 RefSeq:NP_231889.1 ProteinModelPortal:Q9KPV4 SMR:Q9KPV4
PRIDE:Q9KPV4 DNASU:2613180 GeneID:2613180 KEGG:vch:VC2258
PATRIC:20083559 Uniprot:Q9KPV4
Length = 243
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 85 KPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRG 144
KP+Y QR+LLK+SGEAL G IDP + +A+EV + LG++V +V+GGGN+FRG
Sbjct: 6 KPAY--QRILLKLSGEALQGSEGFGIDPTVLDRMAQEVKELVELGVQVGVVIGGGNLFRG 63
Query: 145 ASAAGNSGLDRSSADYIGYFLLIL 168
A A +G++R D++G ++
Sbjct: 64 AGLA-KAGMNRVVGDHMGMLATVM 86
>TIGR_CMR|CBU_1384 [details] [associations]
symbol:CBU_1384 "uridylate kinase" species:227377
"Coxiella burnetii RSA 493" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P0A7E9 RefSeq:NP_820373.1
ProteinModelPortal:Q83BV3 SMR:Q83BV3 PRIDE:Q83BV3 GeneID:1209290
KEGG:cbu:CBU_1384 PATRIC:17931513
BioCyc:CBUR227377:GJ7S-1372-MONOMER Uniprot:Q83BV3
Length = 243
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 39/88 (44%), Positives = 59/88 (67%)
Query: 81 NGMSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGN 140
NG +P Y+ RVLLK+SGEAL G IDP + +A++V V +LG+++AIV+GGGN
Sbjct: 3 NG-PQPLYR--RVLLKMSGEALMGKGLHAIDPNVLDRMAKDVTQVYQLGVQIAIVIGGGN 59
Query: 141 IFRGASAAGNSGLDRSSADYIGYFLLIL 168
FRGA+ +G++R + DY+G ++
Sbjct: 60 FFRGAALQA-AGINRITGDYMGMLATLM 86
>TIGR_CMR|ECH_0266 [details] [associations]
symbol:ECH_0266 "uridylate kinase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 RefSeq:YP_507087.1 ProteinModelPortal:Q2GHJ6
STRING:Q2GHJ6 GeneID:3928016 KEGG:ech:ECH_0266 PATRIC:20576049
BioCyc:ECHA205920:GJNR-266-MONOMER Uniprot:Q2GHJ6
Length = 244
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 84 SKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFR 143
S K+ RVLLKVSGEAL G D ++ ++ ++ V G+++ +VVGGGNIFR
Sbjct: 5 SATKVKYSRVLLKVSGEALMGKKGFGCDIEVLDKLSHDLKEVHSFGVQLCLVVGGGNIFR 64
Query: 144 GASAAGNSGLDRSSADYIG 162
GASA+ + G +R+S DYIG
Sbjct: 65 GASASASFGFERASNDYIG 83
>UNIPROTKB|P0A7E9 [details] [associations]
symbol:pyrH "PyrH" species:83333 "Escherichia coli K-12"
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=IEA] [GO:0044210 "'de novo' CTP biosynthetic process"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042802
"identical protein binding" evidence=IDA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0033862 "UMP kinase activity" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006221 "pyrimidine nucleotide
biosynthetic process" evidence=IEA] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008652 EMBL:U70214
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 EMBL:D13334
GO:GO:0044210 eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903
OMA:RHMEKGR HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 EMBL:X78809 PIR:B45269 RefSeq:NP_414713.1
RefSeq:YP_488473.1 PDB:2BND PDB:2BNE PDB:2BNF PDB:2V4Y PDBsum:2BND
PDBsum:2BNE PDBsum:2BNF PDBsum:2V4Y ProteinModelPortal:P0A7E9
SMR:P0A7E9 DIP:DIP-31830N IntAct:P0A7E9 MINT:MINT-1222953
PaxDb:P0A7E9 PRIDE:P0A7E9 EnsemblBacteria:EBESCT00000004594
EnsemblBacteria:EBESCT00000016112 GeneID:12933231 GeneID:944989
KEGG:ecj:Y75_p0167 KEGG:eco:b0171 PATRIC:32115451 EchoBASE:EB1501
EcoGene:EG11539 BioCyc:EcoCyc:UMPKI-MONOMER
BioCyc:ECOL316407:JW0166-MONOMER BioCyc:MetaCyc:UMPKI-MONOMER
BRENDA:2.7.4.22 SABIO-RK:P0A7E9 EvolutionaryTrace:P0A7E9
Genevestigator:P0A7E9 Uniprot:P0A7E9
Length = 241
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 37/85 (43%), Positives = 55/85 (64%)
Query: 84 SKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFR 143
+KP YK R+LLK+SGEAL G ID I +A+E+ + LGI+V +V+GGGN+FR
Sbjct: 5 AKPVYK--RILLKLSGEALQGTEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNLFR 62
Query: 144 GASAAGNSGLDRSSADYIGYFLLIL 168
GA A +G++R D++G ++
Sbjct: 63 GAGLA-KAGMNRVVGDHMGMLATVM 86
>UNIPROTKB|P65929 [details] [associations]
symbol:pyrH "Uridylate kinase" species:1773 "Mycobacterium
tuberculosis" [GO:0000287 "magnesium ion binding" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0006225 "UDP biosynthetic
process" evidence=IDA] [GO:0033862 "UMP kinase activity"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] [GO:0051289
"protein homotetramerization" evidence=IPI] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005886 GO:GO:0005524
GO:GO:0005737 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 GO:GO:0006200 GO:GO:0008652
GO:GO:0051289 EMBL:BX842581 Gene3D:3.40.1160.10 SUPFAM:SSF53633
GO:GO:0033862 GO:GO:0006225 GO:GO:0044210 eggNOG:COG0528
HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR HAMAP:MF_01220_B
TIGRFAMs:TIGR02075 ProtClustDB:PRK00358 PIR:F70924
RefSeq:NP_217399.1 RefSeq:NP_337462.2 RefSeq:YP_006516336.1
PDB:3NWY PDBsum:3NWY ProteinModelPortal:P65929 SMR:P65929
PRIDE:P65929 EnsemblBacteria:EBMYCT00000003573
EnsemblBacteria:EBMYCT00000069614 GeneID:13317676 GeneID:887709
GeneID:925329 KEGG:mtc:MT2951 KEGG:mtu:Rv2883c KEGG:mtv:RVBD_2883c
PATRIC:18128260 TubercuList:Rv2883c EvolutionaryTrace:P65929
Uniprot:P65929
Length = 261
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
+ RVLLK+ GE G +DP + +AR++A V R G+++A+V+GGGN FRGA
Sbjct: 30 YSRVLLKLGGEMFGGGQV-GLDPDVVAQVARQIADVVRGGVQIAVVIGGGNFFRGAQLQ- 87
Query: 150 NSGLDRSSADYIG 162
G++R+ +DY+G
Sbjct: 88 QLGMERTRSDYMG 100
>TIGR_CMR|APH_0111 [details] [associations]
symbol:APH_0111 "uridylate kinase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
RefSeq:YP_504739.1 ProteinModelPortal:Q2GLL2 STRING:Q2GLL2
GeneID:3930967 KEGG:aph:APH_0111 PATRIC:20948786 eggNOG:COG0528
HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
BioCyc:APHA212042:GHPM-146-MONOMER HAMAP:MF_01220_B
PANTHER:PTHR26059 TIGRFAMs:TIGR02075 Uniprot:Q2GLL2
Length = 244
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/74 (47%), Positives = 50/74 (67%)
Query: 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
++ RVLLKVSGEALAG+ D + ++ ++ V G+E+ IVVGGGNIFRG+S +
Sbjct: 12 RYSRVLLKVSGEALAGERGFGFDQDVIGKLSCDLKKVRESGVELCIVVGGGNIFRGSSTS 71
Query: 149 GNSGLDRSSADYIG 162
G +R+S DY+G
Sbjct: 72 --FGFERASNDYVG 83
>TIGR_CMR|CJE_1410 [details] [associations]
symbol:CJE_1410 "uridylate kinase" species:195099
"Campylobacter jejuni RM1221" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:CP000025 GenomeReviews:CP000025_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 RefSeq:YP_179396.1 HSSP:P0A7E9
ProteinModelPortal:Q5HTI9 STRING:Q5HTI9 GeneID:3231916
KEGG:cjr:CJE1410 PATRIC:20044622
BioCyc:CJEJ195099:GJC0-1437-MONOMER Uniprot:Q5HTI9
Length = 239
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 91 QRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGN 150
+RVL+K SGEALAG++ I+ I IA E+ + + IEV IV+GGGNI RG SAA
Sbjct: 5 KRVLVKFSGEALAGENGFGIENSILKFIASEIKELIKNQIEVGIVIGGGNIIRGVSAAKG 64
Query: 151 SGLDRSSADYIGYFLLIL 168
+ R+S D++G ++
Sbjct: 65 GLIKRTSGDHMGMLATVI 82
>TIGR_CMR|BA_1797 [details] [associations]
symbol:BA_1797 "uridylate kinase" species:198094 "Bacillus
anthracis str. Ames" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
HOGENOM:HOG000047187 KO:K09903 HAMAP:MF_01220_B PANTHER:PTHR26059
TIGRFAMs:TIGR02075 RefSeq:NP_844222.1 RefSeq:YP_018435.1
RefSeq:YP_027931.1 PDB:2JJX PDBsum:2JJX ProteinModelPortal:Q81S73
IntAct:Q81S73 DNASU:1086122 EnsemblBacteria:EBBACT00000008266
EnsemblBacteria:EBBACT00000018753 EnsemblBacteria:EBBACT00000020173
GeneID:1086122 GeneID:2814751 GeneID:2849897 KEGG:ban:BA_1797
KEGG:bar:GBAA_1797 KEGG:bat:BAS1665 OMA:EADNIGM
ProtClustDB:PRK14557 BioCyc:BANT260799:GJAJ-1736-MONOMER
BioCyc:BANT261594:GJ7F-1807-MONOMER EvolutionaryTrace:Q81S73
Uniprot:Q81S73
Length = 247
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 40/74 (54%), Positives = 50/74 (67%)
Query: 90 WQRVLLKVSGEALAGDHTQN-IDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
++RVL+K+SG ALA D T N + K IA E+ S+ LGIEV+IV+GGGNIFRG A
Sbjct: 4 YKRVLIKLSGGALA-DQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRG-HLA 61
Query: 149 GNSGLDRSSADYIG 162
G+DR AD IG
Sbjct: 62 EEWGIDRVEADNIG 75
>TIGR_CMR|NSE_0946 [details] [associations]
symbol:NSE_0946 "uridylate kinase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0009041 "uridylate
kinase activity" evidence=ISS] [GO:0015949 "nucleobase-containing
small molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 Gene3D:3.40.1160.10 SUPFAM:SSF53633 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
RefSeq:YP_506810.1 ProteinModelPortal:Q2GCI6 STRING:Q2GCI6
GeneID:3931337 KEGG:nse:NSE_0946 PATRIC:22681871
ProtClustDB:CLSK2527950 BioCyc:NSEN222891:GHFU-948-MONOMER
Uniprot:Q2GCI6
Length = 233
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 91 QRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGN 150
+RVLLK+SGE LA D ++ +AR + V +GI+V +V+GGGNI+RG+S N
Sbjct: 2 RRVLLKISGERLAARGVSVHDAEVIGMLARGIKRVHEMGIQVCLVIGGGNIYRGSSGIPN 61
Query: 151 SGLDRSSADYIGYFLLIL 168
+DR++ DY+G ++
Sbjct: 62 --IDRATGDYMGMLATVI 77
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 170 150 0.00087 104 3 11 22 0.48 31
30 0.39 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 569 (61 KB)
Total size of DFA: 132 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.81u 0.14s 15.95t Elapsed: 00:00:00
Total cpu time: 15.82u 0.14s 15.96t Elapsed: 00:00:00
Start: Mon May 20 19:31:26 2013 End: Mon May 20 19:31:26 2013