BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030876
(170 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2JS42|PYRH_SYNJA Uridylate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pyrH
PE=3 SV=1
Length = 254
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 60/80 (75%)
Query: 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
K++R+LLK+SGEAL G+ IDP++ +IA EVASV R G++VAIVVGGGNI+RG A
Sbjct: 2 KYRRILLKLSGEALMGERPYGIDPEVLQSIASEVASVVRAGVQVAIVVGGGNIWRGRKEA 61
Query: 149 GNSGLDRSSADYIGYFLLIL 168
G+D++SADY+G ++
Sbjct: 62 AAQGMDQASADYVGMLATVI 81
>sp|Q2JJE2|PYRH_SYNJB Uridylate kinase OS=Synechococcus sp. (strain JA-2-3B'a(2-13))
GN=pyrH PE=3 SV=1
Length = 253
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 60/80 (75%)
Query: 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
K++R+LLK+SGEAL G+ IDP++ +IA EVASV R G++VAIVVGGGNI+RG A
Sbjct: 2 KYRRILLKLSGEALMGERPYGIDPEVLKSIAGEVASVVRAGVQVAIVVGGGNIWRGRKEA 61
Query: 149 GNSGLDRSSADYIGYFLLIL 168
G+D++SADY+G ++
Sbjct: 62 AAQGMDQASADYVGMLATVI 81
>sp|Q2IMM2|PYRH_ANADE Uridylate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-C)
GN=pyrH PE=3 SV=1
Length = 251
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 84 SKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFR 143
S P ++QR+LLK+SGEAL GD I PK +IA +V V LG+EVA+ +GGGNIFR
Sbjct: 7 SNPKARYQRILLKLSGEALMGDGKYGISPKTLTSIAHDVKDVVDLGVEVALTIGGGNIFR 66
Query: 144 GASAAGNSGLDRSSADYIGYFLLIL 168
G S A G+DRSSADY+G ++
Sbjct: 67 GVSGA-TEGMDRSSADYMGMLATVI 90
>sp|Q0A7I2|PYRH_ALHEH Uridylate kinase OS=Alkalilimnicola ehrlichei (strain MLHE-1)
GN=pyrH PE=3 SV=1
Length = 242
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 3/86 (3%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
MS+P YK R+LLK+SGEAL GD I P + IA EVA V+R+G+E+A+V+GGGNIF
Sbjct: 1 MSQPQYK--RILLKLSGEALMGDAAYGISPDVIRRIAHEVAEVSRMGVEIALVIGGGNIF 58
Query: 143 RGASAAGNSGLDRSSADYIGYFLLIL 168
RGA A +G+DR +AD++G ++
Sbjct: 59 RGAGLAA-AGMDRVTADHMGMLATVM 83
>sp|Q7NI44|PYRH_GLOVI Uridylate kinase OS=Gloeobacter violaceus (strain PCC 7421) GN=pyrH
PE=3 SV=1
Length = 235
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
K++RVLLK+SGEAL GD IDP++ ++A E+A V G E+A+VVGGGNIFRG A+
Sbjct: 2 KYRRVLLKLSGEALMGDREFGIDPEVVKSLAGEIARVVEAGTELAVVVGGGNIFRGVKAS 61
Query: 149 GNSGLDRSSADYIGYFLLIL 168
+SG+DR++ADY+G ++
Sbjct: 62 -SSGMDRATADYVGMLATVM 80
>sp|Q10Y48|PYRH_TRIEI Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101)
GN=pyrH PE=3 SV=1
Length = 244
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
+QRVLLK+SGEAL G IDP + IA+EVA V GI++AIVVGGGNIFRG AA
Sbjct: 5 YQRVLLKLSGEALMGSLGYGIDPAVVQGIAQEVAEVAATGIQIAIVVGGGNIFRGVKAA- 63
Query: 150 NSGLDRSSADYIGYFLLIL 168
+ G+DR++ADY+G ++
Sbjct: 64 SKGMDRATADYVGMIATVM 82
>sp|Q313G6|PYRH_DESDG Uridylate kinase OS=Desulfovibrio desulfuricans (strain G20)
GN=pyrH PE=3 SV=1
Length = 238
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
K++R L+K+SGEALAGD IDP+ I RE+A V +G++V++V+GGGNIFRG S++
Sbjct: 5 KYKRALIKLSGEALAGDKKFGIDPETVSNICREIAEVLEMGLQVSLVIGGGNIFRGLSSS 64
Query: 149 GNSGLDRSSADYIGYFLLIL 168
G+DRSSADY+G +L
Sbjct: 65 AK-GMDRSSADYMGMLATVL 83
>sp|P74457|PYRH_SYNY3 Uridylate kinase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=pyrH PE=3 SV=1
Length = 260
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Query: 80 DNGMSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGG 139
D GMS +QRVLLK+SGEAL GD IDP + IA+E+ V + G+++AIVVGGG
Sbjct: 18 DGGMS-----YQRVLLKLSGEALMGDLGYGIDPAVVGTIAQEIKDVLQAGVQLAIVVGGG 72
Query: 140 NIFRGASAAGNSGLDRSSADYIGYFLLIL 168
NIFRG A+ +G+DR++ADYIG ++
Sbjct: 73 NIFRGVKASA-AGMDRATADYIGMIATVM 100
>sp|Q3MFI4|PYRH_ANAVT Uridylate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC
7937) GN=pyrH PE=3 SV=1
Length = 242
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
++RVLLK+SGEAL G+ IDP++ IA+E+A V G+++AIVVGGGNIFRG AA
Sbjct: 5 YRRVLLKLSGEALMGNMGYGIDPEVVKEIAQEIAEVIATGVQIAIVVGGGNIFRGVKAA- 63
Query: 150 NSGLDRSSADYIGYFLLIL 168
++G+DR++ADYIG ++
Sbjct: 64 SAGMDRATADYIGMIATVM 82
>sp|Q8YXK5|PYRH_NOSS1 Uridylate kinase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=pyrH PE=3 SV=1
Length = 242
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
++RVLLK+SGEAL G+ IDP++ IA+E+A V G+++AIVVGGGNIFRG AA
Sbjct: 5 YRRVLLKLSGEALMGNMGYGIDPEVVKEIAQEIAEVIATGVQIAIVVGGGNIFRGVKAA- 63
Query: 150 NSGLDRSSADYIGYFLLIL 168
++G+DR++ADYIG ++
Sbjct: 64 SAGMDRATADYIGMIATVM 82
>sp|Q8DM63|PYRH_THEEB Uridylate kinase OS=Thermosynechococcus elongatus (strain BP-1)
GN=pyrH PE=3 SV=1
Length = 242
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 87 SYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGAS 146
S K++RVLLK+SGEAL G+ IDPK+ + A E+A V + G++ AIVVGGGNIFRG
Sbjct: 2 SPKYRRVLLKLSGEALMGNLNYGIDPKVVQSFASEIAQVVQAGVQTAIVVGGGNIFRGMK 61
Query: 147 AAGNSGLDRSSADYIGYFLLIL 168
A +G+DR++ADYIG ++
Sbjct: 62 GAA-AGMDRATADYIGMIATVM 82
>sp|A1VFB1|PYRH_DESVV Uridylate kinase OS=Desulfovibrio vulgaris subsp. vulgaris (strain
DP4) GN=pyrH PE=3 SV=1
Length = 238
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
K++RVLLK+SGEALAG++ IDP I E+A V +G++VA+V+GGGNIFRG S++
Sbjct: 5 KYKRVLLKLSGEALAGENKFGIDPATVSKICHEIADVVDMGLQVALVIGGGNIFRGLSSS 64
Query: 149 GNSGLDRSSADYIGYFLLIL 168
G+DRSSADY+G +L
Sbjct: 65 AK-GMDRSSADYMGMLATVL 83
>sp|Q72DQ8|PYRH_DESVH Uridylate kinase OS=Desulfovibrio vulgaris (strain Hildenborough /
ATCC 29579 / NCIMB 8303) GN=pyrH PE=3 SV=1
Length = 238
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
K++RVLLK+SGEALAG++ IDP I E+A V +G++VA+V+GGGNIFRG S++
Sbjct: 5 KYKRVLLKLSGEALAGENKFGIDPATVSKICHEIADVVDMGLQVALVIGGGNIFRGLSSS 64
Query: 149 GNSGLDRSSADYIGYFLLIL 168
G+DRSSADY+G +L
Sbjct: 65 AK-GMDRSSADYMGMLATVL 83
>sp|Q8EQV1|PYRH_OCEIH Uridylate kinase OS=Oceanobacillus iheyensis (strain DSM 14371 /
JCM 11309 / KCTC 3954 / HTE831) GN=pyrH PE=3 SV=1
Length = 240
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
++ RV+LK+SGEAL+GD IDPK+ +I+++V V LG+EVAIVVGGGNI+RG
Sbjct: 5 RYNRVVLKLSGEALSGDQGYGIDPKVIQSISKQVKEVADLGVEVAIVVGGGNIWRG-KVG 63
Query: 149 GNSGLDRSSADYIGYFLLIL 168
G+DR+SADY+G I+
Sbjct: 64 SEMGMDRASADYMGMLATIM 83
>sp|A7H724|PYRH_ANADF Uridylate kinase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=pyrH
PE=3 SV=1
Length = 249
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 85 KPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRG 144
KPSYK R+LLK+SGEAL GD I PK AIA +V LG+EVA+ +GGGNIFRG
Sbjct: 10 KPSYK--RILLKLSGEALMGDGKYGISPKTLSAIAGDVKDCVDLGVEVALTIGGGNIFRG 67
Query: 145 ASAAGNSGLDRSSADYIGYFLLIL 168
S A G+DRSSADY+G ++
Sbjct: 68 VSGA-TEGMDRSSADYMGMLATVI 90
>sp|Q3A397|PYRH_PELCD Uridylate kinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra
Bd 1) GN=pyrH PE=3 SV=1
Length = 241
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Query: 84 SKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFR 143
+P YK R+LLK+SGEALAG+ IDP++ IA E+ V LG++VA+V+GGGNIFR
Sbjct: 4 QEPVYK--RILLKLSGEALAGNQGFGIDPQVISGIAEEIREVIGLGVQVAVVIGGGNIFR 61
Query: 144 GASAAGNSGLDRSSADYIGYFLLIL 168
G +AA G+DR+ ADY+G I+
Sbjct: 62 GMAAAA-GGMDRAGADYMGMLATIM 85
>sp|Q1MRD8|PYRH_LAWIP Uridylate kinase OS=Lawsonia intracellularis (strain PHE/MN1-00)
GN=pyrH PE=3 SV=1
Length = 238
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 3/86 (3%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
MS+ +YK RVLLK+SGE+LAG IDP + E++SV LG+++A+V+GGGNIF
Sbjct: 1 MSQMTYK--RVLLKLSGESLAGRQLTGIDPDTVAVLCNELSSVIELGLQIALVIGGGNIF 58
Query: 143 RGASAAGNSGLDRSSADYIGYFLLIL 168
RG SA+ G+DRSSADY+G +L
Sbjct: 59 RGLSASAK-GMDRSSADYMGMLATVL 83
>sp|Q5N3B6|PYRH_SYNP6 Uridylate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301
/ SAUG 1402/1) GN=pyrH PE=3 SV=2
Length = 240
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
++RVLLK+SGEAL GD + IDP + IA+E+A+V + G +VAIVVGGGNIFRG A
Sbjct: 3 YKRVLLKLSGEALMGDASYGIDPAVVQRIAQEIATVVQDGFQVAIVVGGGNIFRGIKGAA 62
Query: 150 NSGLDRSSADYIGYFLLIL 168
+G++R++ADY+G ++
Sbjct: 63 -AGMERATADYVGMIATVM 80
>sp|Q31QY1|PYRH_SYNE7 Uridylate kinase OS=Synechococcus elongatus (strain PCC 7942)
GN=pyrH PE=3 SV=2
Length = 240
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
++RVLLK+SGEAL GD + IDP + IA+E+A+V + G +VAIVVGGGNIFRG A
Sbjct: 3 YKRVLLKLSGEALMGDASYGIDPAVVQRIAQEIATVVQDGFQVAIVVGGGNIFRGIKGAA 62
Query: 150 NSGLDRSSADYIGYFLLIL 168
+G++R++ADY+G ++
Sbjct: 63 -AGMERATADYVGMIATVM 80
>sp|Q5L0K0|PYRH_GEOKA Uridylate kinase OS=Geobacillus kaustophilus (strain HTA426)
GN=pyrH PE=3 SV=1
Length = 240
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
M +P YK RV+LK+SGEALAG I P + +IA++V V LG+EVAIVVGGGNI+
Sbjct: 1 MEQPKYK--RVVLKLSGEALAGKQGFGIQPAVIQSIAKQVKEVVELGVEVAIVVGGGNIW 58
Query: 143 RGASAAGNSGLDRSSADYIGYFLLIL 168
RG + + G+DR++ADY+G ++
Sbjct: 59 RGKTGS-EMGMDRATADYMGMLATVM 83
>sp|Q21WY7|PYRH_RHOFD Uridylate kinase OS=Rhodoferax ferrireducens (strain DSM 15236 /
ATCC BAA-621 / T118) GN=pyrH PE=3 SV=1
Length = 240
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 63/86 (73%), Gaps = 3/86 (3%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
++KP++K R+LLK+SGEAL GD I+ + + E+A VTRLG+EVA+V+GGGNIF
Sbjct: 3 VAKPAHK--RILLKLSGEALMGDDQFGINHDTIVRMVDEIAEVTRLGVEVAVVIGGGNIF 60
Query: 143 RGASAAGNSGLDRSSADYIGYFLLIL 168
RG A G+ G+DR++ADY+G ++
Sbjct: 61 RGV-AGGSVGMDRATADYMGMLATVM 85
>sp|Q0AEH6|PYRH_NITEC Uridylate kinase OS=Nitrosomonas eutropha (strain C91) GN=pyrH PE=3
SV=1
Length = 237
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
++R+LLK+SGEAL GD ID + I E+A V +LG+EVAIVVGGGNIFRG +AG
Sbjct: 5 YKRILLKLSGEALMGDAQYGIDRTVVERIVVEIAGVLQLGVEVAIVVGGGNIFRGMKSAG 64
Query: 150 NSGLDRSSADYIG 162
+ G+DR +ADY+G
Sbjct: 65 D-GMDRVTADYMG 76
>sp|A5GSA3|PYRH_SYNR3 Uridylate kinase OS=Synechococcus sp. (strain RCC307) GN=pyrH PE=3
SV=1
Length = 237
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
+QRVLLK+SGEAL GD IDP I AIA++VA V G ++AIVVGGGNIFRG +
Sbjct: 3 YQRVLLKLSGEALMGDQGYGIDPAIVSAIAKDVAEVVAKGTQLAIVVGGGNIFRGLKGSA 62
Query: 150 NSGLDRSSADYIGYFLLIL 168
+G++R++ADY+G ++
Sbjct: 63 -AGMERATADYVGMLATVM 80
>sp|Q82TZ7|PYRH_NITEU Uridylate kinase OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC
14298) GN=pyrH PE=3 SV=1
Length = 237
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
++R+LLK+SGEAL GD ID + I EVA V +LG+EVAIVVGGGNIFRG +AG
Sbjct: 5 YKRILLKLSGEALMGDGHYGIDRAVVEHIVVEVAGVLQLGVEVAIVVGGGNIFRGMKSAG 64
Query: 150 NSGLDRSSADYIG 162
+ G+DR +ADY+G
Sbjct: 65 D-GMDRVTADYMG 76
>sp|Q1D1I1|PYRH_MYXXD Uridylate kinase OS=Myxococcus xanthus (strain DK 1622) GN=pyrH
PE=3 SV=1
Length = 250
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 84 SKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFR 143
+K +QR+LLK+SGEAL G+ I P M IA EV + + G+EVA+V+GGGNIFR
Sbjct: 5 TKKPLPYQRILLKLSGEALMGEGKYGIHPPTLMGIAEEVIELAQAGVEVALVIGGGNIFR 64
Query: 144 GASAAGNSGLDRSSADYIGYF 164
G + A G+DR+SADY+G
Sbjct: 65 GVAGA-TEGMDRASADYMGML 84
>sp|Q2YBA5|PYRH_NITMU Uridylate kinase OS=Nitrosospira multiformis (strain ATCC 25196 /
NCIMB 11849) GN=pyrH PE=3 SV=1
Length = 238
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 62/86 (72%), Gaps = 3/86 (3%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
M+ P+YK R+LLK+SGEAL GD + I+ + I E+A V +LG+EVA+V+GGGNIF
Sbjct: 1 MTIPAYK--RILLKLSGEALMGDDSYGINRDVIERIVAEIAEVNQLGVEVAVVIGGGNIF 58
Query: 143 RGASAAGNSGLDRSSADYIGYFLLIL 168
RG +++ G+DR++ADY+G ++
Sbjct: 59 RGMTSSA-EGMDRATADYMGMLATVM 83
>sp|A1VN42|PYRH_POLNA Uridylate kinase OS=Polaromonas naphthalenivorans (strain CJ2)
GN=pyrH PE=3 SV=1
Length = 236
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 86 PSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGA 145
P+YK R+LLK+SGEAL GD I+ + + E+A VTR+G++VA+V+GGGNIFRG
Sbjct: 2 PAYK--RILLKLSGEALMGDDAFGINRATIVRMVEEIAEVTRMGVQVAVVIGGGNIFRGV 59
Query: 146 SAAGNSGLDRSSADYIGYFLLIL 168
A G+ G+DR++ADY+G ++
Sbjct: 60 -AGGSVGMDRATADYMGMLATVM 81
>sp|Q7V6C2|PYRH_PROMM Uridylate kinase OS=Prochlorococcus marinus (strain MIT 9313)
GN=pyrH PE=3 SV=1
Length = 237
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
+ RVLLK+SGEAL GD + IDP I +IA +VA V G ++AIVVGGGNIFRG +
Sbjct: 3 YARVLLKLSGEALMGDQSYGIDPAIVQSIAEDVAKVVAKGTQLAIVVGGGNIFRGLKGSA 62
Query: 150 NSGLDRSSADYIGYFLLIL 168
+G+DR++ADY+G ++
Sbjct: 63 -AGMDRATADYVGMLATVM 80
>sp|A2C7Q3|PYRH_PROM3 Uridylate kinase OS=Prochlorococcus marinus (strain MIT 9303)
GN=pyrH PE=3 SV=1
Length = 237
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
+ RVLLK+SGEAL GD + IDP I +IA +VA V G ++AIVVGGGNIFRG +
Sbjct: 3 YARVLLKLSGEALMGDQSYGIDPAIVQSIAEDVAKVVAKGTQLAIVVGGGNIFRGLKGSA 62
Query: 150 NSGLDRSSADYIGYFLLIL 168
+G+DR++ADY+G ++
Sbjct: 63 -AGMDRATADYVGMLATVM 80
>sp|A0LJ65|PYRH_SYNFM Uridylate kinase OS=Syntrophobacter fumaroxidans (strain DSM 10017
/ MPOB) GN=pyrH PE=3 SV=1
Length = 245
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 85 KPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRG 144
KP Y+ R+LLK+SGEAL G ID + IA EV +V ++G++VAIV+GGGNIFRG
Sbjct: 5 KPIYR--RILLKLSGEALLGKEAYGIDSSVLDQIAEEVTAVHQMGVQVAIVIGGGNIFRG 62
Query: 145 ASAAGNSGLDRSSADYIGYFLLIL 168
S A + G+DRS+ADY+G ++
Sbjct: 63 VSGA-SRGMDRSTADYMGMLATVM 85
>sp|A1AQN4|PYRH_PELPD Uridylate kinase OS=Pelobacter propionicus (strain DSM 2379)
GN=pyrH PE=3 SV=1
Length = 239
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
MS+P K+ RVLLK+SGE+LAG IDPK IARE+ V + G+++A+V+GGGNIF
Sbjct: 1 MSRP--KFTRVLLKLSGESLAGSQGYGIDPKTITTIAREIKEVVQQGVQLALVIGGGNIF 58
Query: 143 RGASAAGNSGLDRSSADYIGYF 164
RG AA + G+DR+ AD +G
Sbjct: 59 RGL-AASSQGMDRAGADNMGML 79
>sp|Q12A33|PYRH_POLSJ Uridylate kinase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500)
GN=pyrH PE=3 SV=1
Length = 236
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 86 PSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGA 145
P+YK R+LLK+SGEAL GD I+ + + E+A VTR+G++VA+V+GGGNIFRG
Sbjct: 2 PAYK--RILLKLSGEALMGDDAFGINHATIVRMVEEIAEVTRMGVQVAVVIGGGNIFRGV 59
Query: 146 SAAGNSGLDRSSADYIGYFLLIL 168
A G+ G+DR++ADY+G ++
Sbjct: 60 -AGGSVGMDRATADYMGMLATVM 81
>sp|Q0I8L5|PYRH_SYNS3 Uridylate kinase OS=Synechococcus sp. (strain CC9311) GN=pyrH PE=3
SV=1
Length = 235
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
+ R LLK+SGEAL G+ IDP+I AIAR+VA V G ++AIVVGGGNIFRG +
Sbjct: 3 YARALLKLSGEALMGNQGYGIDPEIVQAIARDVAEVVATGTQLAIVVGGGNIFRGLKGSA 62
Query: 150 NSGLDRSSADYIGYFLLIL 168
+G+DR++ADY+G ++
Sbjct: 63 -AGMDRATADYVGMLATVM 80
>sp|A1W916|PYRH_ACISJ Uridylate kinase OS=Acidovorax sp. (strain JS42) GN=pyrH PE=3 SV=1
Length = 240
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 62/86 (72%), Gaps = 3/86 (3%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
++ P++K R+LLK+SGEAL GD I+ + + E+A VTRLG++VA+V+GGGNIF
Sbjct: 3 LATPAHK--RILLKLSGEALMGDDAFGINRATIVRMVEEIAEVTRLGVQVAVVIGGGNIF 60
Query: 143 RGASAAGNSGLDRSSADYIGYFLLIL 168
RG A G+ G+DR++ADY+G ++
Sbjct: 61 RGV-AGGSVGMDRATADYMGMLATVM 85
>sp|Q74BW2|PYRH_GEOSL Uridylate kinase OS=Geobacter sulfurreducens (strain ATCC 51573 /
DSM 12127 / PCA) GN=pyrH PE=3 SV=1
Length = 239
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
M P Y RVLLK+SGEALAGD IDP+ AIA E+ V G ++A+V+GGGNIF
Sbjct: 1 MGTPYYG--RVLLKLSGEALAGDQGYGIDPRTITAIAAEIKEVVATGSQLALVIGGGNIF 58
Query: 143 RGASAAGNSGLDRSSADYIG 162
RG AA + G+DR+SADY+G
Sbjct: 59 RGL-AASSKGMDRASADYMG 77
>sp|Q3AB79|PYRH_CARHZ Uridylate kinase OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=pyrH PE=3 SV=1
Length = 242
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Query: 86 PSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTR-LGIEVAIVVGGGNIFRG 144
PS K++RV+LK+SGEALAG+ IDP++ +IA ++A + + GI+VA+VVGGGNI+RG
Sbjct: 2 PSPKYKRVVLKLSGEALAGEKGYGIDPEVVNSIAGQIAEIIKEFGIQVAVVVGGGNIWRG 61
Query: 145 ASAAGNSGLDRSSADYIGYFLLIL 168
S + G+DR++ADY+G ++
Sbjct: 62 LSGSA-KGMDRATADYMGMLATVI 84
>sp|Q1WUG5|PYRH_LACS1 Uridylate kinase OS=Lactobacillus salivarius (strain UCC118)
GN=pyrH PE=3 SV=1
Length = 240
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
K++RVLLK+SGEALAGD + I+P + +A E+ V LG+++AIVVGGGN++RG + A
Sbjct: 5 KYKRVLLKLSGEALAGDQGKGINPPEILKVAEEIKEVHDLGVQIAIVVGGGNMWRGEAGA 64
Query: 149 GNSGLDRSSADYIGYF 164
G++R+ ADYIG
Sbjct: 65 -EIGMERAQADYIGML 79
>sp|Q03QS3|PYRH_LACBA Uridylate kinase OS=Lactobacillus brevis (strain ATCC 367 / JCM
1170) GN=pyrH PE=3 SV=1
Length = 240
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
K++R++LK+SGEALAGD I+P + +A EV V LGI++AIVVGGGN++RG + A
Sbjct: 5 KYKRIMLKLSGEALAGDKGFGINPPVIKTVAEEVKDVYNLGIQIAIVVGGGNMWRGEAGA 64
Query: 149 GNSGLDRSSADYIGYFLLIL 168
G++R+ ADYIG I+
Sbjct: 65 -QMGMERAQADYIGMLATIM 83
>sp|A4G4S3|PYRH_HERAR Uridylate kinase OS=Herminiimonas arsenicoxydans GN=pyrH PE=3 SV=2
Length = 238
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
M+ P+YK RVLLK+SGEAL GD I+ + +V+ V+RLG+E+AIV+GGGNIF
Sbjct: 1 MTTPAYK--RVLLKLSGEALMGDDPYGINRATIERMVADVSEVSRLGVELAIVIGGGNIF 58
Query: 143 RGASAAGNSGLDRSSADYIGYFLLIL 168
RG A G G+DR++ADY+G ++
Sbjct: 59 RGV-APGAEGMDRATADYMGMLATVM 83
>sp|Q0BTM0|PYRH_GRABC Uridylate kinase OS=Granulibacter bethesdensis (strain ATCC
BAA-1260 / CGDNIH1) GN=pyrH PE=3 SV=1
Length = 246
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 84 SKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFR 143
+P YK RVLLKVSGEAL G +D + IA ++A V G+EV +V+GGGNIFR
Sbjct: 8 EQPVYK--RVLLKVSGEALMGSREYGLDKAMVQTIASDIADVVAFGVEVCLVIGGGNIFR 65
Query: 144 GASAAGNSGLDRSSADYIGYFLLIL 168
G SAA SG+DR+ DYIG ++
Sbjct: 66 GVSAAA-SGMDRAQGDYIGMLATVM 89
>sp|A4IMC5|PYRH_GEOTN Uridylate kinase OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=pyrH PE=3 SV=2
Length = 240
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
M +P YK RV+LK+SGEALAG I P + +IA++V V L +E+AIVVGGGNI+
Sbjct: 1 MEQPKYK--RVVLKLSGEALAGKQGFGIQPAVIQSIAKQVKEVAELDVEIAIVVGGGNIW 58
Query: 143 RGASAAGNSGLDRSSADYIGYFLLIL 168
RG + + G+DR++ADY+G ++
Sbjct: 59 RGKTGS-EMGMDRATADYMGMLATVM 83
>sp|Q39W86|PYRH_GEOMG Uridylate kinase OS=Geobacter metallireducens (strain GS-15 / ATCC
53774 / DSM 7210) GN=pyrH PE=3 SV=1
Length = 239
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
M P YK RVLLK+SGEALAGD IDP IA E+ V G ++A+V+GGGNIF
Sbjct: 1 MGTPYYK--RVLLKLSGEALAGDQGYGIDPLTITTIAAEIKEVVASGAQLALVIGGGNIF 58
Query: 143 RGASAAGNSGLDRSSADYIG 162
RG AA + G+DR+SADY+G
Sbjct: 59 RGL-AASSKGMDRASADYMG 77
>sp|Q1H141|PYRH_METFK Uridylate kinase OS=Methylobacillus flagellatus (strain KT / ATCC
51484 / DSM 6875) GN=pyrH PE=3 SV=1
Length = 238
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
MS P+YK R+LLK+SGEAL GD + I+ I E+ V LG+EVA+V+GGGNIF
Sbjct: 1 MSTPAYK--RILLKLSGEALMGDDSYGINRATISRIVEEIKEVVDLGVEVAVVIGGGNIF 58
Query: 143 RGASAAGNSGLDRSSADYIGYFLLIL 168
RG + A G+DR++ADY+G ++
Sbjct: 59 RGVAPAAE-GMDRATADYMGMLATVM 83
>sp|Q5FPZ5|PYRH_GLUOX Uridylate kinase OS=Gluconobacter oxydans (strain 621H) GN=pyrH
PE=3 SV=2
Length = 246
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 78 LNDNGMSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVG 137
+ +N PSYK RVLLKVSGEAL GD +DP + +A ++A V G+EV +VVG
Sbjct: 2 MTENREQSPSYK--RVLLKVSGEALMGDGPSGVDPVMVDMVAADIADVVASGVEVCLVVG 59
Query: 138 GGNIFRGASAAGNSGLDRSSADYIGYFLLIL 168
GGNIFRG +AA G+DR+ DY G ++
Sbjct: 60 GGNIFRGLAAAAK-GMDRAQGDYAGMLATVI 89
>sp|Q3J2X5|PYRH_RHOS4 Uridylate kinase OS=Rhodobacter sphaeroides (strain ATCC 17023 /
2.4.1 / NCIB 8253 / DSM 158) GN=pyrH PE=3 SV=1
Length = 246
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
++RV+LK+SGEAL GD + P IAREV +V RLG+E+ +V+GGGNIFRG +
Sbjct: 14 YKRVMLKISGEALMGDQGYGLHPPTVQRIAREVQAVHRLGVEICLVIGGGNIFRGLQGSA 73
Query: 150 NSGLDRSSADYIGYFLLIL 168
G++R++ADY+G ++
Sbjct: 74 Q-GMERTTADYMGMLATVM 91
>sp|A6GWS3|PYRH_FLAPJ Uridylate kinase OS=Flavobacterium psychrophilum (strain JIP02/86 /
ATCC 49511) GN=pyrH PE=3 SV=1
Length = 235
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
K++R+LLK+SGEAL GD IDPK A E+ + LG+++AIV+GGGNIFRG + A
Sbjct: 2 KYKRILLKLSGEALMGDRQYGIDPKRLAEYADEIKQIHDLGVQIAIVIGGGNIFRGIAGA 61
Query: 149 GNSGLDRSSADYIG 162
N G+DR DY+G
Sbjct: 62 SN-GMDRVQGDYMG 74
>sp|A5GJF0|PYRH_SYNPW Uridylate kinase OS=Synechococcus sp. (strain WH7803) GN=pyrH PE=3
SV=1
Length = 235
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
+ R LLK+SGEAL GD IDP I AIA++VA V G ++AIVVGGGNIFRG +
Sbjct: 3 YARALLKLSGEALMGDQGYGIDPAIVQAIAKDVAGVVASGTQLAIVVGGGNIFRGLKGSA 62
Query: 150 NSGLDRSSADYIGYFLLIL 168
+G+DR++ADY+G ++
Sbjct: 63 -AGMDRATADYVGMLATVM 80
>sp|A3PJF6|PYRH_RHOS1 Uridylate kinase OS=Rhodobacter sphaeroides (strain ATCC 17029 /
ATH 2.4.9) GN=pyrH PE=3 SV=1
Length = 246
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
++RV+LK+SGEAL GD + P IAREV +V RLG+E+ +V+GGGNIFRG +
Sbjct: 14 YKRVMLKISGEALMGDQGYGLHPPTVQRIAREVQAVHRLGVEICMVIGGGNIFRGLQGSA 73
Query: 150 NSGLDRSSADYIGYFLLIL 168
G++R++ADY+G ++
Sbjct: 74 Q-GMERTTADYMGMLATVM 91
>sp|Q2W4C5|PYRH_MAGSA Uridylate kinase OS=Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264) GN=pyrH PE=3 SV=1
Length = 240
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
K++RVLLK+SGE L G +DP+ IAREV SV LG+EV +V+GGGNIFRG S A
Sbjct: 6 KFRRVLLKISGEGLMGTREYGLDPETVDRIAREVKSVRDLGVEVCVVIGGGNIFRGVSGA 65
Query: 149 GNSGLDRSSADYIGYFLLIL 168
+SG++R++AD +G ++
Sbjct: 66 -SSGMERAAADNMGMLATVI 84
>sp|A4WUH9|PYRH_RHOS5 Uridylate kinase OS=Rhodobacter sphaeroides (strain ATCC 17025 /
ATH 2.4.3) GN=pyrH PE=3 SV=1
Length = 246
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 90 WQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAG 149
++RV+LK+SGEAL GD + P IAREV +V RLG+E+ +V+GGGNIFRG +
Sbjct: 14 YKRVMLKISGEALMGDQGYGLHPPTVQRIAREVQAVHRLGVEICMVIGGGNIFRGLQGSA 73
Query: 150 NSGLDRSSADYIGYFLLIL 168
G++R++ADY+G ++
Sbjct: 74 Q-GMERTTADYMGMLATVM 91
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,726,733
Number of Sequences: 539616
Number of extensions: 1981876
Number of successful extensions: 7843
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 6949
Number of HSP's gapped (non-prelim): 590
length of query: 170
length of database: 191,569,459
effective HSP length: 109
effective length of query: 61
effective length of database: 132,751,315
effective search space: 8097830215
effective search space used: 8097830215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)