BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030877
(170 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1 OS=Mus musculus
GN=Immp1l PE=2 SV=1
Length = 166
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 86/141 (60%), Gaps = 5/141 (3%)
Query: 26 KFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVV 85
++ C H YV + GPSM PTI D+V AE +S F + GD+V+ +SP
Sbjct: 18 QYGCIAHCAFEYVGGVVMCSGPSMEPTIQ-NSDIVFAENLSRHFYGIQRGDIVIAKSPSD 76
Query: 86 PRRIVTKRVIGMEGDRVSYVADPKSSDKFET-VVVPQGHVWIEGDNIYESNDSRKFGAVP 144
P+ + KRVIG+EGD++ SD F++ VP GHVW+EGDN+ S DSR +G +P
Sbjct: 77 PKSNICKRVIGLEGDKI---LSTSPSDVFKSRSYVPTGHVWLEGDNLQNSTDSRYYGPIP 133
Query: 145 YGLIEGRVFLRIWPPKDFGSL 165
YGLI GR+F +IWP DFG L
Sbjct: 134 YGLIRGRIFFKIWPFSDFGFL 154
>sp|Q96LU5|IMP1L_HUMAN Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens
GN=IMMP1L PE=2 SV=1
Length = 166
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 87/141 (61%), Gaps = 5/141 (3%)
Query: 26 KFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVV 85
++ C H YV + GPSM PTI D+V AE +S F + GD+V+ +SP
Sbjct: 18 QYGCIAHCAFEYVGGVVMCSGPSMEPTIQ-NSDIVFAENLSRHFYGIQRGDIVIAKSPSD 76
Query: 86 PRRIVTKRVIGMEGDRVSYVADPKSSDKFET-VVVPQGHVWIEGDNIYESNDSRKFGAVP 144
P+ + KRVIG+EGD++ + SD F++ VP GHVW+EGDN+ S DSR +G +P
Sbjct: 77 PKSNICKRVIGLEGDKILTTS---PSDFFKSHSYVPMGHVWLEGDNLQNSTDSRCYGPIP 133
Query: 145 YGLIEGRVFLRIWPPKDFGSL 165
YGLI GR+F +IWP DFG L
Sbjct: 134 YGLIRGRIFFKIWPLSDFGFL 154
>sp|Q28I39|IMP1L_XENTR Mitochondrial inner membrane protease subunit 1 OS=Xenopus
tropicalis GN=immp1l PE=2 SV=1
Length = 167
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
Query: 26 KFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVV 85
++ C H Y+ + GPSM PTI D++L + +S F + GD+++ +SP
Sbjct: 18 QYGCIAHCAFEYIGEVVICSGPSMEPTIR-NYDVLLCDNLSRHFFSIHKGDIIVAKSPDK 76
Query: 86 PRRIVTKRVIGMEGDRVSYVADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAVPY 145
P + KRVIG+EGD+V ++ P + K T V P+GHVW+EGDN+ S DSR +G VPY
Sbjct: 77 PSVNICKRVIGLEGDKVC-MSSPSALLKRHTYV-PKGHVWLEGDNLDNSTDSRSYGPVPY 134
Query: 146 GLIEGRVFLRIWPPKDFGSL 165
LI GR+ LR+WP + FG L
Sbjct: 135 ALIRGRICLRVWPLESFGPL 154
>sp|O74800|IMP1_SCHPO Mitochondrial inner membrane protease subunit 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=imp1 PE=3 SV=1
Length = 157
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 5/142 (3%)
Query: 18 FEKSLLVGKFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCP-GD 76
F + V + +H ++ Y+ + GPSM+PT+N G+ VL +++ RF + C GD
Sbjct: 5 FRIPIAVVQIAAFVHQIHEYLFQVQMTSGPSMMPTLNSGGEFVLLDKLHGRFARSCSVGD 64
Query: 77 VVLVRSPVVPRRIVTKRVIGMEGDRVSYVADPKSSDKFETVVVPQGHVWIEGDNIYESND 136
VV+ P ++ V KR+IGM GD + YV DP SS+K + +P GHVW+ GDNI S D
Sbjct: 65 VVVSAKPSDSKQHVCKRIIGMPGDTI-YV-DPTSSNK--KITIPLGHVWLAGDNIAHSLD 120
Query: 137 SRKFGAVPYGLIEGRVFLRIWP 158
SR +G VP GLI+ +V R+WP
Sbjct: 121 SRNYGPVPMGLIKAKVIARVWP 142
>sp|Q6AZD4|IMP2L_DANRE Mitochondrial inner membrane protease subunit 2 OS=Danio rerio
GN=immp2l PE=2 SV=1
Length = 183
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 80/159 (50%), Gaps = 19/159 (11%)
Query: 13 FAKEGFEK---SLLVGKFFCCLHVVNTYVCTPALAY-----GPSMLPTINLTG----DLV 60
A+ GF + V FF + V T LAY G SM P++N G D+V
Sbjct: 1 MAQTGFGRRYFKAFVSGFFVAVPV--TVTVLDRLAYVARVEGASMQPSLNPDGESSPDVV 58
Query: 61 LAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADPKSSDKFETVVVP 120
L R S R V GD+V V SP P++ + KRVIG+EGD + + K V VP
Sbjct: 59 LLNRWSVRNYHVQRGDIVSVLSPKNPQQKIIKRVIGIEGDFIKTLGY-----KNRYVRVP 113
Query: 121 QGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPP 159
GH+WIEGD+ S DS FG V GL+ GR IWPP
Sbjct: 114 DGHLWIEGDHHGHSFDSNAFGPVSLGLVHGRASHIIWPP 152
>sp|P28627|IMP1_YEAST Mitochondrial inner membrane protease subunit 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMP1 PE=1
SV=3
Length = 190
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 10/135 (7%)
Query: 28 FCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPR 87
C LH+++ Y G SMLPT++ T D V + + GD ++ P P
Sbjct: 20 LCFLHIIHMYAYEFTETRGESMLPTLSATNDYVHVLKNFQNGRGIKMGDCIVALKPTDPN 79
Query: 88 RIVTKRVIGMEGDRV--------SYVADPK-SSDKFETVV-VPQGHVWIEGDNIYESNDS 137
+ KRV GM GD V +YV D ++F T + VP+GHVW+ GDN+ S DS
Sbjct: 80 HRICKRVTGMPGDLVLVDPSTIVNYVGDVLVDEERFGTYIKVPEGHVWVTGDNLSHSLDS 139
Query: 138 RKFGAVPYGLIEGRV 152
R + A+P GLI G++
Sbjct: 140 RTYNALPMGLIMGKI 154
>sp|P46972|IMP2_YEAST Mitochondrial inner membrane protease subunit 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMP2 PE=1
SV=1
Length = 177
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 14 AKEGFEKSLLVGKFFCCLHVVNTYVCTPALAYGPSMLPTIN-----LTGDLVLAERISTR 68
+K +L+ + L +N V A G SM PT+N L D VL + +
Sbjct: 7 SKRFLRNTLIAISWVPVLLTINNNVVHIAQVKGTSMQPTLNPQTETLATDWVLLWKFGVK 66
Query: 69 F-NKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADPKSSDKFETVVVPQGHVWIE 127
+ + D++L ++P PR++ KRV G+ D + D K V +P+GH+W+E
Sbjct: 67 NPSNLSRDDIILFKAPTNPRKVYCKRVKGLPFDTI----DTKFPYPKPQVNLPRGHIWVE 122
Query: 128 GDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGS 164
GDN + S DS FG + GL+ G+ +WPP +G+
Sbjct: 123 GDNYFHSIDSNTFGPISSGLVIGKAITIVWPPSRWGT 159
>sp|Q2KI92|IMP2L_BOVIN Mitochondrial inner membrane protease subunit 2 OS=Bos taurus
GN=IMMP2L PE=2 SV=1
Length = 177
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Query: 27 FFCCLHVVNTY---VCTPALAYGPSMLPTINLTG----DLVLAERISTRFNKVCPGDVVL 79
FF + V T+ V A G SM P++N G D+VL R +V GD+V
Sbjct: 19 FFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVLLNHWKVRNFEVQRGDIVS 78
Query: 80 VRSPVVPRRIVTKRVIGMEGDRVSYVADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRK 139
+ SP P + + KRVI +EGD V + K V VP+GH+W+EGD+ S DS
Sbjct: 79 LVSPKNPEQKIIKRVIALEGDIVKTMGH-----KNRYVKVPRGHIWVEGDHHGHSFDSNS 133
Query: 140 FGAVPYGLIEGRVFLRIWPPKDFGSL 165
FG V GL+ +WPPK + L
Sbjct: 134 FGPVSLGLLHAHATHILWPPKRWQKL 159
>sp|Q9UST2|IMP2L_SCHPO Mitochondrial inner membrane protease subunit 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC336.13c PE=3 SV=1
Length = 180
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Query: 3 VRNQLSLFVTFAKEGFEKSLLVGKFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLA 62
VRNQ +F F+ + + + L V +V + G SM P N +++
Sbjct: 6 VRNQ-----SFKSVFFKNLVGITLWVPVLMFVEQHVVSVGTIEGRSMKPAFNPETNMLQR 60
Query: 63 ERIST-RFNKVCP-GDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADPKSSDKFETVVVP 120
+R+ ++NK GDVV++RSP P ++ KRV+G+E D + + K V VP
Sbjct: 61 DRVLLWKWNKDYKRGDVVILRSPENPEELLVKRVLGVEYD----IMKTRPPKKLSLVPVP 116
Query: 121 QGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGSLGR 167
+GHVW+EGD + S DS KFG V GLI +V ++P F GR
Sbjct: 117 EGHVWVEGDEQFHSIDSNKFGPVSTGLITAKVIAILFP---FSRAGR 160
>sp|Q96T52|IMP2L_HUMAN Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens
GN=IMMP2L PE=2 SV=1
Length = 175
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Query: 27 FFCCLHVVNTY---VCTPALAYGPSMLPTINLTG----DLVLAERISTRFNKVCPGDVVL 79
FF + V T+ V A G SM P++N G D+VL R +V GD+V
Sbjct: 19 FFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVLLNHWKVRNFEVHRGDIVS 78
Query: 80 VRSPVVPRRIVTKRVIGMEGDRVSYVADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRK 139
+ SP P + + KRVI +EGD V + K V VP+GH+W+EGD+ S DS
Sbjct: 79 LVSPKNPEQKIIKRVIALEGDIVRTIGH-----KNRYVKVPRGHIWVEGDHHGHSFDSNS 133
Query: 140 FGAVPYGLIEGRVFLRIWPPKDFGSL 165
FG V GL+ +WPP+ + L
Sbjct: 134 FGPVSLGLLHAHATHILWPPERWQKL 159
>sp|Q5PQ63|IMP2L_XENLA Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis
GN=immp2l PE=2 SV=1
Length = 170
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 23 LVGKFFCCLHVVNTY---VCTPALAYGPSMLPTINLTG----DLVLAERISTRFNKVCPG 75
+ FF + V T+ V A G SM P++N D+VL R R V G
Sbjct: 12 FISGFFVAVPVTVTFLDRVACIARVEGVSMQPSLNPDARGESDIVLLNRWRARNYDVQRG 71
Query: 76 DVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADPKSSDKFETVVVPQGHVWIEGDNIYESN 135
D+V + SP P + + KRVI +EGD V + K V VP+GHVW+EGD+ S
Sbjct: 72 DIVSLVSPKNPEQKIIKRVIALEGDIVKTLGH-----KNRYVKVPRGHVWVEGDHHGHSF 126
Query: 136 DSRKFGAVPYGLIEGRVFLRIWPPKDFGSL 165
DS FG V GL+ +WPP + L
Sbjct: 127 DSNAFGPVSLGLLHSHATHILWPPNRWQKL 156
>sp|Q8BPT6|IMP2L_MOUSE Mitochondrial inner membrane protease subunit 2 OS=Mus musculus
GN=Immp2l PE=2 SV=1
Length = 175
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Query: 27 FFCCLHVVNTY---VCTPALAYGPSMLPTINLTG----DLVLAERISTRFNKVCPGDVVL 79
FF + V T+ V A G SM P++N G D+VL R +V GD+V
Sbjct: 19 FFVAVPVAVTFLDRVACVARVEGSSMQPSLNPGGSQSSDVVLLNHWKVRNFEVQRGDIVS 78
Query: 80 VRSPVVPRRIVTKRVIGMEGDRVSYVADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRK 139
+ SP P + + KRVI +EGD V + K V VP+GH+W+EGD+ S DS
Sbjct: 79 LVSPKNPEQKIIKRVIALEGDIVRTIGH-----KNRLVKVPRGHMWVEGDHHGHSFDSNS 133
Query: 140 FGAVPYGLIEGRVFLRIWPPKDFGSL 165
FG V GL+ +WPP+ + L
Sbjct: 134 FGPVSLGLLHAHATHILWPPERWQRL 159
>sp|Q9M9Z2|TPP2_ARATH Probable thylakoidal processing peptidase 2, chloroplastic
OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1
Length = 367
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 23/134 (17%)
Query: 48 SMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVV-------PRRIVTKRVIGMEGD 100
SMLPT+++ GD V+AE++S F K D+V+ ++P + + KR++ EGD
Sbjct: 214 SMLPTLDV-GDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGD 272
Query: 101 RVS------YVADPKSSDKF---------ETVVVPQGHVWIEGDNIYESNDSRKFGAVPY 145
V V D ++ F E + VP+G+V++ GDN +S DS +G +P
Sbjct: 273 WVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPI 332
Query: 146 GLIEGRVFLRIWPP 159
I GR R WPP
Sbjct: 333 KNIIGRSVFRYWPP 346
>sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1
PE=2 SV=2
Length = 291
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 37 YVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRI------- 89
++ P SM PT ++ GD ++AE++S F K C D+V+ +SP V + +
Sbjct: 131 FIAEPRYIPSLSMYPTFDV-GDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADV 189
Query: 90 VTKRVIGMEGDRVS----------------YVADPKSSDKFETVVVPQGHVWIEGDNIYE 133
KR++ EGD V ++ +P + + VP+ V++ GDN
Sbjct: 190 FIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEPPGYE-MTPIRVPENSVFVMGDNRNN 248
Query: 134 SNDSRKFGAVPYGLIEGRVFLRIWPPK 160
S DS +G +P I GR R WPP
Sbjct: 249 SYDSHVWGPLPLKNIIGRSVFRYWPPN 275
>sp|O04348|TPP1_ARATH Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis
thaliana GN=TPP1 PE=2 SV=2
Length = 340
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 28/138 (20%)
Query: 48 SMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVV----------PRRIVTKRVIGM 97
SM PT++ GD V+AE++S F K D+V+ ++P + + KR++
Sbjct: 184 SMYPTLD-KGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVAS 242
Query: 98 EGDRV----------------SYVADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFG 141
EGD V +V +P S + E + VP+G+V++ GDN +S DS +G
Sbjct: 243 EGDWVEVRDGKLFVNDIVQEEDFVLEPMSYE-MEPMFVPKGYVFVLGDNRNKSFDSHNWG 301
Query: 142 AVPYGLIEGRVFLRIWPP 159
+P I GR R WPP
Sbjct: 302 PLPIENIVGRSVFRYWPP 319
>sp|P72660|LEP1_SYNY3 Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB1 PE=3 SV=1
Length = 196
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 25/153 (16%)
Query: 37 YVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPR-------RI 89
+V P SMLPT+ GD ++ E++S F+ GD+++ P + + +
Sbjct: 33 FVAEPRYIPSDSMLPTLE-QGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQA 91
Query: 90 VTKRVIGMEGDRVS----------------YVADPKSSDKFETVVVPQGHVWIEGDNIYE 133
KRVI + G V Y+ +P + V VP G V++ GDN
Sbjct: 92 FIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYN-LPAVRVPDGQVFVMGDNRNN 150
Query: 134 SNDSRKFGAVPYGLIEGRVFLRIWPPKDFGSLG 166
SNDS +G +P I G R +P +G LG
Sbjct: 151 SNDSHVWGFLPQQNIIGHALFRFFPASRWGQLG 183
>sp|P41027|LEP_BACCL Signal peptidase I OS=Bacillus caldolyticus GN=lepB PE=3 SV=1
Length = 182
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 32/164 (19%)
Query: 29 CCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRR 88
C + + +V + + G SM+PT+ +G+L++ ++S + D+++ + +
Sbjct: 19 CVVATLRLFVFSNYVVEGKSMMPTLE-SGNLLIVNKLSYDIGPIRRFDIIVFHAN--KKE 75
Query: 89 IVTKRVIGMEGDRVSYVAD-----PKSSDK--------------------FETVV----V 119
KRVIG+ GDR++Y D K D+ E V V
Sbjct: 76 DYVKRVIGLPGDRIAYKNDILYVNGKKVDEPYLRPYKQKLLDGRLTGDFTLEEVTGKTRV 135
Query: 120 PQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFG 163
P G +++ GDN S DSR FG V I G+V R WP K F
Sbjct: 136 PPGCIFVLGDNRLSSWDSRHFGFVKINQIVGKVDFRYWPFKQFA 179
>sp|Q6GIC3|LEP_STAAR Signal peptidase IB OS=Staphylococcus aureus (strain MRSA252)
GN=spsB PE=3 SV=1
Length = 191
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 36/181 (19%)
Query: 15 KEGFEKSLLVGKFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCP 74
KE E + + F L +V ++ TP G SM PT+ G+ V I + +
Sbjct: 3 KELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIIGYKTGGLEK 61
Query: 75 GDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADP-----KSSDK---------------- 113
G+VV+ + + KRVIG+ GD+V Y D K D+
Sbjct: 62 GNVVVFHANKNDDYV--KRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYIT 119
Query: 114 --FE----------TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKD 161
F+ + V+P+G + GDN S DSR FG + I G+V R WP +
Sbjct: 120 GTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
Query: 162 F 162
F
Sbjct: 180 F 180
>sp|P0A069|LEP_STAAW Signal peptidase IB OS=Staphylococcus aureus (strain MW2) GN=spsB
PE=3 SV=1
Length = 191
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 36/181 (19%)
Query: 15 KEGFEKSLLVGKFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCP 74
KE E + + F L +V ++ TP G SM PT+ G+ V I + +
Sbjct: 3 KELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIIGYKTGGLEK 61
Query: 75 GDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADP-----KSSDK---------------- 113
G+VV+ + + KRVIG+ GD+V Y D K D+
Sbjct: 62 GNVVVFHANKNDDYV--KRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYIT 119
Query: 114 --FE----------TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKD 161
F+ + V+P+G + GDN S DSR FG + I G+V R WP +
Sbjct: 120 GTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
Query: 162 F 162
F
Sbjct: 180 F 180
>sp|P0A070|LEP_STAAU Signal peptidase IB OS=Staphylococcus aureus GN=spsB PE=3 SV=1
Length = 191
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 36/181 (19%)
Query: 15 KEGFEKSLLVGKFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCP 74
KE E + + F L +V ++ TP G SM PT+ G+ V I + +
Sbjct: 3 KELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIIGYKTGGLEK 61
Query: 75 GDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADP-----KSSDK---------------- 113
G+VV+ + + KRVIG+ GD+V Y D K D+
Sbjct: 62 GNVVVFHANKNDDYV--KRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYIT 119
Query: 114 --FE----------TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKD 161
F+ + V+P+G + GDN S DSR FG + I G+V R WP +
Sbjct: 120 GTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
Query: 162 F 162
F
Sbjct: 180 F 180
>sp|Q6GAW1|LEP_STAAS Signal peptidase IB OS=Staphylococcus aureus (strain MSSA476)
GN=spsB PE=3 SV=1
Length = 191
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 36/181 (19%)
Query: 15 KEGFEKSLLVGKFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCP 74
KE E + + F L +V ++ TP G SM PT+ G+ V I + +
Sbjct: 3 KELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIIGYKTGGLEK 61
Query: 75 GDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADP-----KSSDK---------------- 113
G+VV+ + + KRVIG+ GD+V Y D K D+
Sbjct: 62 GNVVVFHANKNDDYV--KRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYIT 119
Query: 114 --FE----------TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKD 161
F+ + V+P+G + GDN S DSR FG + I G+V R WP +
Sbjct: 120 GTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
Query: 162 F 162
F
Sbjct: 180 F 180
>sp|P0A068|LEP_STAAN Signal peptidase IB OS=Staphylococcus aureus (strain N315) GN=spsB
PE=1 SV=1
Length = 191
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 36/181 (19%)
Query: 15 KEGFEKSLLVGKFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCP 74
KE E + + F L +V ++ TP G SM PT+ G+ V I + +
Sbjct: 3 KELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIIGYKTGGLEK 61
Query: 75 GDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADP-----KSSDK---------------- 113
G+VV+ + + KRVIG+ GD+V Y D K D+
Sbjct: 62 GNVVVFHANKNDDYV--KRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYIT 119
Query: 114 --FE----------TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKD 161
F+ + V+P+G + GDN S DSR FG + I G+V R WP +
Sbjct: 120 GTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
Query: 162 F 162
F
Sbjct: 180 F 180
>sp|P0A067|LEP_STAAM Signal peptidase IB OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=spsB PE=3 SV=1
Length = 191
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 36/181 (19%)
Query: 15 KEGFEKSLLVGKFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCP 74
KE E + + F L +V ++ TP G SM PT+ G+ V I + +
Sbjct: 3 KELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIIGYKTGGLEK 61
Query: 75 GDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADP-----KSSDK---------------- 113
G+VV+ + + KRVIG+ GD+V Y D K D+
Sbjct: 62 GNVVVFHANKNDDYV--KRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYIT 119
Query: 114 --FE----------TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKD 161
F+ + V+P+G + GDN S DSR FG + I G+V R WP +
Sbjct: 120 GTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
Query: 162 F 162
F
Sbjct: 180 F 180
>sp|Q5HHB9|LEP_STAAC Signal peptidase IB OS=Staphylococcus aureus (strain COL) GN=spsB
PE=3 SV=2
Length = 191
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 75/181 (41%), Gaps = 36/181 (19%)
Query: 15 KEGFEKSLLVGKFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCP 74
KE E + + F L +V ++ TP G SM PT+ G+ V + + +
Sbjct: 3 KEILEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLK-DGERVAVNIVGYKTGGLEK 61
Query: 75 GDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADP-----KSSDK---------------- 113
G+VV+ + + KRVIG+ GD+V Y D K D+
Sbjct: 62 GNVVVFHANKNDDYV--KRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYIT 119
Query: 114 --FE----------TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKD 161
F+ + V+P+G + GDN S DSR FG + I G+V R WP +
Sbjct: 120 GTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
Query: 162 F 162
F
Sbjct: 180 F 180
>sp|Q10789|LEP_MYCTU Signal peptidase I OS=Mycobacterium tuberculosis GN=lepB PE=1 SV=1
Length = 294
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 76/204 (37%), Gaps = 72/204 (35%)
Query: 32 HVVNTYVCTPALAYGPSMLPTIN----LTGDLVLAERISTRFNKVCPGDVVLVRSP---- 83
+V+ T+V P L SM PT++ GD ++ +++S RF PGDV++ R P
Sbjct: 80 YVMLTFVARPYLIPSESMEPTLHGCSTCVGDRIMVDKLSYRFGSPQPGDVIVFRGPPSWN 139
Query: 84 ------------------------VVP--RRIVTKRVIGMEG------------------ 99
VP + KRVI + G
Sbjct: 140 VGYKSIRSHNVAVRWVQNALSFIGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGRPL 199
Query: 100 -----DRVSYVADPKS----SDKFETVVVPQGHVWIEGDNIYESNDSRKF---------- 140
D + +ADP +F V VP G VW+ GDN S DSR
Sbjct: 200 KEPYLDPATMMADPSIYPCLGSEFGPVTVPPGRVWVMGDNRTHSADSRAHCPLLCTDDPL 259
Query: 141 -GAVPYGLIEGRVFLRIWPPKDFG 163
G VP + G+ L +WPP +G
Sbjct: 260 PGTVPVANVIGKARLIVWPPSRWG 283
>sp|O33021|LEP_MYCLE Probable signal peptidase I OS=Mycobacterium leprae (strain TN)
GN=lepB PE=3 SV=1
Length = 289
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 80/214 (37%), Gaps = 79/214 (36%)
Query: 32 HVVNTYVCTPALAYGPSMLPTIN----LTGDLVLAERISTRFNKVCPGDVVLVRSP---- 83
+V+ T+V P L SM PT++ GD ++ ++I+ RF+ PGDV++ + P
Sbjct: 68 YVMLTFVARPYLIPSESMEPTLHGCSGCVGDRIMVDKITYRFSSPQPGDVIVFKGPPSWN 127
Query: 84 ----------VVPRRI----------------VTKRVIGMEGDRVSYVAD---------- 107
+V R + + KRVI + G V +D
Sbjct: 128 TMYKSIRSNNIVLRSVQNALSFVGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGKPL 187
Query: 108 -----------------PKSSDKFETVVVPQGHVWIEGDNIYESNDSR------------ 138
P +F V VPQG +W+ GDN S DSR
Sbjct: 188 KEPYLRPVTMNADLSFSPCLGSEFGPVTVPQGRLWVMGDNRIHSADSRYHCNSTDVVNGL 247
Query: 139 ------KFGAVPYGLIEGRVFLRIWPPKDFGSLG 166
G VP + G+ + +WPP +G +G
Sbjct: 248 SCTGDPNSGTVPVSNVIGKARVVVWPPSRWGGVG 281
>sp|P73157|LEP2_SYNY3 Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB2 PE=3 SV=1
Length = 218
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 34 VNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVT-- 91
+ T+V SM PT+ + L++ E+IS R G++V V +P +
Sbjct: 38 IRTFVAEARYIPSSSMEPTLQINDRLII-EKISYRLRDPERGEIV-VFNPTDALKAKNFH 95
Query: 92 ----KRVIGMEGDRV----------------SYVADPKSSDKFETVVVPQGHVWIEGDNI 131
KR+IG+ GD V +Y+A P + + + V VP + GDN
Sbjct: 96 DAFIKRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYE-YGPVKVPDDQYLVLGDNR 154
Query: 132 YESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGSLGRRAE 170
S DS +G VP + GR F+R WP G L AE
Sbjct: 155 NNSYDSHYWGFVPREKLLGRAFVRFWPVPRVGLLTDDAE 193
>sp|Q51876|LEP_PHOLA Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1
Length = 203
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 27/157 (17%)
Query: 34 VNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLV--------RSPVV 85
+ T+V SMLPT+ + D ++ E+IS FN GD+++ ++P +
Sbjct: 45 IRTFVAEARYIPSESMLPTLEVN-DRLIVEKISYHFNPPRRGDIIVFHPTEALKQQNPSL 103
Query: 86 PRRIVTKRVIGMEGDRV----------------SYVADPKSSDKFETVVVPQGHVWIEGD 129
+ KRVIG+ G+ V +Y+ P ++ VP + GD
Sbjct: 104 NEAFI-KRVIGLPGETVQVTGGRVLINGQPLEENYIQSPPDY-QWGPEKVPADSFLVLGD 161
Query: 130 NIYESNDSRKFGAVPYGLIEGRVFLRIWPPKDFGSLG 166
N S DS +G VP I GR +R WP G LG
Sbjct: 162 NRNNSYDSHFWGYVPRQNIIGRAVVRFWPVNRLGELG 198
>sp|Q6GIC4|LEPH_STAAR Inactive signal peptidase IA OS=Staphylococcus aureus (strain
MRSA252) GN=spsA PE=3 SV=1
Length = 174
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 27/148 (18%)
Query: 34 VNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKR 93
V T+V + M PT+N GD V+ +I FN++ GD++ R I T R
Sbjct: 21 VQTFVIVGHVIPNNDMSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSR 76
Query: 94 VIGMEG-------------DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDN 130
+I G DR SY + K D K + ++P + + D+
Sbjct: 77 IIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKKLDGDIIPPNNFVVLNDH 136
Query: 131 IYESNDSRKFGAVPYGLIEGRVFLRIWP 158
+DSR+FG + I G + LR +P
Sbjct: 137 DNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>sp|O07560|LEPV_BACSU Signal peptidase I V OS=Bacillus subtilis (strain 168) GN=sipV PE=2
SV=1
Length = 168
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 32/127 (25%)
Query: 46 GPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGDRVSY- 104
G SM PT G+ +L + S RF + D+VL + P +++ KRVIG+ G+ + Y
Sbjct: 32 GVSMNPTFQ-EGNELLVNKFSHRFKTIHRFDIVLFKGP--DHKVLIKRVIGLPGETIKYK 88
Query: 105 ----------VADP-----KS-------------SDKFETVVVPQGHVWIEGDNIYESND 136
VA+P KS D T VP+G ++ GDN S D
Sbjct: 89 DDQLYVNGKQVAEPFLKHLKSVSAGSHVTGDFSLKDVTGTSKVPKGKYFVVGDNRIYSFD 148
Query: 137 SRKFGAV 143
SR FG +
Sbjct: 149 SRHFGPI 155
>sp|P0A065|LEPH_STAAW Inactive signal peptidase IA OS=Staphylococcus aureus (strain MW2)
GN=spsA PE=3 SV=1
Length = 174
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 27/148 (18%)
Query: 34 VNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKR 93
V T+V + M PT+N GD V+ +I FN++ GD++ R I T R
Sbjct: 21 VQTFVIVGHVIPNNDMSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSR 76
Query: 94 VIGMEG-------------DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDN 130
+I G DR SY + K D + + ++P + + D+
Sbjct: 77 IIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDH 136
Query: 131 IYESNDSRKFGAVPYGLIEGRVFLRIWP 158
+DSR+FG + I G + LR +P
Sbjct: 137 DNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>sp|P0A066|LEPH_STAAU Inactive signal peptidase IA OS=Staphylococcus aureus GN=spsA PE=3
SV=1
Length = 174
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 27/148 (18%)
Query: 34 VNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKR 93
V T+V + M PT+N GD V+ +I FN++ GD++ R I T R
Sbjct: 21 VQTFVIVGHVIPNNDMSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSR 76
Query: 94 VIGMEG-------------DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDN 130
+I G DR SY + K D + + ++P + + D+
Sbjct: 77 IIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDH 136
Query: 131 IYESNDSRKFGAVPYGLIEGRVFLRIWP 158
+DSR+FG + I G + LR +P
Sbjct: 137 DNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>sp|Q6GAW2|LEPH_STAAS Inactive signal peptidase IA OS=Staphylococcus aureus (strain
MSSA476) GN=spsA PE=3 SV=1
Length = 174
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 27/148 (18%)
Query: 34 VNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKR 93
V T+V + M PT+N GD V+ +I FN++ GD++ R I T R
Sbjct: 21 VQTFVIVGHVIPNNDMSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSR 76
Query: 94 VIGMEG-------------DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDN 130
+I G DR SY + K D + + ++P + + D+
Sbjct: 77 IIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDH 136
Query: 131 IYESNDSRKFGAVPYGLIEGRVFLRIWP 158
+DSR+FG + I G + LR +P
Sbjct: 137 DNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>sp|P0A064|LEPH_STAAN Inactive signal peptidase IA OS=Staphylococcus aureus (strain N315)
GN=spsA PE=3 SV=1
Length = 174
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 27/148 (18%)
Query: 34 VNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKR 93
V T+V + M PT+N GD V+ +I FN++ GD++ R I T R
Sbjct: 21 VQTFVIVGHVIPNNDMSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSR 76
Query: 94 VIGMEG-------------DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDN 130
+I G DR SY + K D + + ++P + + D+
Sbjct: 77 IIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDH 136
Query: 131 IYESNDSRKFGAVPYGLIEGRVFLRIWP 158
+DSR+FG + I G + LR +P
Sbjct: 137 DNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>sp|P0A063|LEPH_STAAM Inactive signal peptidase IA OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=spsA PE=3 SV=1
Length = 174
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 27/148 (18%)
Query: 34 VNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKR 93
V T+V + M PT+N GD V+ +I FN++ GD++ R I T R
Sbjct: 21 VQTFVIVGHVIPNNDMSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSR 76
Query: 94 VIGMEG-------------DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDN 130
+I G DR SY + K D + + ++P + + D+
Sbjct: 77 IIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDH 136
Query: 131 IYESNDSRKFGAVPYGLIEGRVFLRIWP 158
+DSR+FG + I G + LR +P
Sbjct: 137 DNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>sp|Q5HHC0|LEPH_STAAC Inactive signal peptidase IA OS=Staphylococcus aureus (strain COL)
GN=spsA PE=3 SV=1
Length = 174
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 27/148 (18%)
Query: 34 VNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKR 93
V T+V + M PT+N GD V+ +I FN++ GD++ R I T R
Sbjct: 21 VQTFVIVGHVIPNNDMSPTLN-KGDRVIVNKIKVTFNQLNNGDIITYRRG---NEIYTSR 76
Query: 94 VIGMEG-------------DR---VSYVADPKSSD-------KFETVVVPQGHVWIEGDN 130
+I G DR SY + K D + + ++P + + D
Sbjct: 77 IIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDQ 136
Query: 131 IYESNDSRKFGAVPYGLIEGRVFLRIWP 158
+DSR+FG + I G V LR +P
Sbjct: 137 DNNKHDSRQFGLIDKKDIIGNVSLRYYP 164
>sp|P57347|LEP_BUCAI Signal peptidase I OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=lepB PE=3 SV=1
Length = 314
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 28 FCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERIS------------TRFNKVCPG 75
F + ++ +++ P SM+PT+ L GD +L E+ S R K G
Sbjct: 68 FLAIFIIRSFIYEPFQIPSGSMMPTL-LVGDFILVEKFSYGIKEPITHKILIRTKKPNRG 126
Query: 76 DVVLVRSPVVPRRIVTKRVIGMEGDRVSY 104
D+ + + P KR+IG+ GD++ Y
Sbjct: 127 DIAVFQHPTDHNINYIKRIIGLPGDKIRY 155
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 116 TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPKD 161
T +VP+G ++ GDN S DSR +G VP + G+ ++IW D
Sbjct: 251 TWIVPKGEYFMMGDNRDNSLDSRYWGFVPEKNLVGKA-IKIWMSFD 295
>sp|Q89AM6|LEP_BUCBP Signal peptidase I OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=lepB PE=3 SV=1
Length = 310
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 33 VVNTYVCTPALAYGPSMLPTINLTGDLVLAERIS------------TRFNKVCPGDVVLV 80
++ T++C P SM+PT+ L GD +L ++ S N GD+V+
Sbjct: 67 IIRTFICEPFQIPSESMMPTL-LPGDFILVKKFSYGIKNPFSNNVIVFINTPKRGDIVVF 125
Query: 81 RSPVVPRRIVTKRVIGMEGDRVSY 104
+ P KR++G+ GD+++Y
Sbjct: 126 KHPNNNAINYVKRIVGLPGDKINY 149
>sp|P00803|LEP_ECOLI Signal peptidase I OS=Escherichia coli (strain K12) GN=lepB PE=1
SV=2
Length = 324
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 33 VVNTYVCTPALAYGPSMLPTINLTGDLVLAERIS----------TRFNKVCP--GDVVLV 80
+V +++ P SM+PT+ L GD +L E+ + T P GD+V+
Sbjct: 76 IVRSFIYEPFQIPSGSMMPTL-LIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVF 134
Query: 81 RSPVVPRRIVTKRVIGMEGDRVSYVADPKSSD 112
+ P P+ KR +G+ GD+V+Y DP S +
Sbjct: 135 KYPEDPKLDYIKRAVGLPGDKVTY--DPVSKE 164
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 85 VPRRIVTKRVIGMEGDRVS-YVADPKSSDKFETVVVPQGHVWIEGDNIYESNDSRKFGAV 143
V RI+T + + D+V Y P + T +VP G ++ GDN S DSR +G V
Sbjct: 234 VTHRILT---VPIAQDQVGMYYQQP--GQQLATWIVPPGQYFMMGDNRDNSADSRYWGFV 288
Query: 144 PYGLIEGRVFLRIW 157
P + GR IW
Sbjct: 289 PEANLVGRA-TAIW 301
>sp|P71013|LEPT_BACSU Signal peptidase I T OS=Bacillus subtilis (strain 168) GN=sipT PE=1
SV=1
Length = 193
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 29/144 (20%)
Query: 20 KSLLVGKFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVL 79
K++++ L + ++ P L G SM PT++ G+ + + ++ GD+V+
Sbjct: 25 KAIVIAVLLALL--IRHFLFEPYLVEGSSMYPTLH-DGERLFVNKTVNYIGELKRGDIVI 81
Query: 80 VRSPVVPRRIVTKRVIGMEGDRVSY-----------VADP------KSSDK--------F 114
+ V KR+IG G+ V VA+P K ++K F
Sbjct: 82 INGETSKIHYV-KRLIGKPGETVQMKDDTLYINGKKVAEPYLSKNKKEAEKLGVSLTGDF 140
Query: 115 ETVVVPQGHVWIEGDNIYESNDSR 138
V VP+G ++ GDN S DSR
Sbjct: 141 GPVKVPKGKYFVMGDNRLNSMDSR 164
>sp|P26844|LEP_PSEFL Signal peptidase I OS=Pseudomonas fluorescens GN=lepB PE=3 SV=1
Length = 284
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 72/200 (36%), Gaps = 71/200 (35%)
Query: 27 FFCCLHVV---NTYVCTPALAYGPSMLPTINLTGDLVLAERISTRF------NKVCP--- 74
FF L +V +++ P SM PT+++ GD +L + S KV
Sbjct: 66 FFPVLFIVLVLRSFLVEPFQIPSGSMKPTLDV-GDFILVNKFSYGIRLPVIDKKVIEVGD 124
Query: 75 ---GDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADPKSSDKFETVV------------- 118
GDV++ R P P KRV+G+ GD V Y +D + E+V
Sbjct: 125 PQRGDVMVFRYPSDPNVNYIKRVVGLPGDVVRYTSDKRLFINGESVAEKLLGAEPNTLGS 184
Query: 119 -------------------------------VPQGHVWIEGDNIYESNDSRKF------- 140
VP GH ++ GDN SNDSR +
Sbjct: 185 AELYQEKLGAVEHEIRKEMSRYRAMPDGQWKVPAGHYFMMGDNRDNSNDSRYWDDPNIPK 244
Query: 141 ---GAVPYGLIEGRVFLRIW 157
G VP I G+ F +W
Sbjct: 245 DLLGMVPDENIVGKAF-AVW 263
>sp|P41025|LEP2_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipS2 PE=3 SV=1
Length = 193
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 27/131 (20%)
Query: 33 VVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTK 92
++ ++ P L G SM PT++ G+ + + ++ GD+V++ V K
Sbjct: 36 LIRHFLFEPYLVEGSSMYPTLH-DGERLFVNKSVNYIGEIERGDIVIINGDTSKVHYV-K 93
Query: 93 RVIGMEGDRVS----------------YVADPKSSDK---------FETVVVPQGHVWIE 127
R+IG G+ V Y+A K K F V VP+G ++
Sbjct: 94 RLIGKPGETVEMKNDTLYINGKKIAEPYLASNKKEAKKLGVNLTGDFGPVKVPKGKYFVM 153
Query: 128 GDNIYESNDSR 138
GDN S DSR
Sbjct: 154 GDNRLNSMDSR 164
>sp|P0A1W2|LEP_SALTY Signal peptidase I OS=Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720) GN=lepB PE=3 SV=1
Length = 324
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 33 VVNTYVCTPALAYGPSMLPTINLTGDLVLAERIS----------TRFNKVCP--GDVVLV 80
+V +++ P SM+PT+ L GD +L E+ + T P GD+V+
Sbjct: 76 IVRSFLYEPFQIPSGSMMPTL-LIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVF 134
Query: 81 RSPVVPRRIVTKRVIGMEGDRVSYVADPKSSD 112
+ P P+ KR +G+ GD+++Y DP + +
Sbjct: 135 KYPEDPKLDYIKRAVGLPGDKITY--DPVAKE 164
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 116 TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIW 157
T VVP G ++ GDN S DSR +G VP + G+ + IW
Sbjct: 261 TWVVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGKA-VAIW 301
>sp|P0A1W3|LEP_SALTI Signal peptidase I OS=Salmonella typhi GN=lepB PE=3 SV=1
Length = 324
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 33 VVNTYVCTPALAYGPSMLPTINLTGDLVLAERIS----------TRFNKVCP--GDVVLV 80
+V +++ P SM+PT+ L GD +L E+ + T P GD+V+
Sbjct: 76 IVRSFLYEPFQIPSGSMMPTL-LIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVF 134
Query: 81 RSPVVPRRIVTKRVIGMEGDRVSYVADPKSSD 112
+ P P+ KR +G+ GD+++Y DP + +
Sbjct: 135 KYPEDPKLDYIKRAVGLPGDKITY--DPVAKE 164
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 116 TVVVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIW 157
T VVP G ++ GDN S DSR +G VP + G+ + IW
Sbjct: 261 TWVVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGKA-VAIW 301
>sp|O67088|LEP_AQUAE Signal peptidase I OS=Aquifex aeolicus (strain VF5) GN=lepB PE=3
SV=1
Length = 256
Score = 37.7 bits (86), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 118 VVPQGHVWIEGDNIYESNDSRKFGAVPYGLIEGRVFLRIWPPK 160
VVP+G+ ++ GDN S DSR +G VP IEG+ F+ + K
Sbjct: 177 VVPEGYYFVMGDNRDNSQDSRFWGFVPRENIEGKAFVIYYSGK 219
Score = 33.9 bits (76), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 20 KSLLVGKFFCCLHV--VNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDV 77
+ +V F L V + Y+ SM PT+ L GD +L ++ ++ GD+
Sbjct: 2 RKQIVELFLIILAVLFIREYIAQAYTIPSASMEPTL-LVGDFILVNKLVYSLSEPMRGDM 60
Query: 78 VLVRSPVVPRRIVTKRVIGMEGDRVSY 104
++ + P P KR+I GD V +
Sbjct: 61 IVFKYPKNPDIDFIKRIIARGGDTVEF 87
>sp|Q9I5G7|LEP_PSEAE Signal peptidase I OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=lepB PE=3 SV=1
Length = 284
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 72/210 (34%), Gaps = 72/210 (34%)
Query: 27 FFCCLHVV---NTYVCTPALAYGPSMLPTINLTGDLVLAE------RISTRFNKVCP--- 74
FF L +V +++ P SM PT+ + GD +L R+ KV P
Sbjct: 66 FFPVLFIVLVLRSFLVEPFQIPSGSMKPTLEV-GDFILVNKFAYGIRLPVLDTKVIPIGD 124
Query: 75 ---GDVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADPKSSDKFETVV------------- 118
GDV++ R P P KRV+G+ GD V Y + + E V
Sbjct: 125 PQRGDVMVFRYPSEPNINYIKRVVGLPGDTVRYTKEKRLYVNGELVAEKLVGEEPGTLGS 184
Query: 119 -------------------------------VPQGHVWIEGDNIYESNDSRKF------- 140
+P GH ++ GDN SNDSR +
Sbjct: 185 VTLYQEKLGQAEHLIRKEMSRYRIEPDRQWTIPAGHYFMMGDNRDNSNDSRYWNDPKIPK 244
Query: 141 ---GAVPYGLIEGRVF--LRIWPPKDFGSL 165
G VP I G+ F WP +L
Sbjct: 245 DLLGMVPDRNIVGKAFAVWMSWPDPKMSNL 274
>sp|Q8K9R0|LEP_BUCAP Signal peptidase I OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=lepB PE=3 SV=1
Length = 312
Score = 36.6 bits (83), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 28 FCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERIS------------TRFNKVCPG 75
F + ++ +++ P SM+PT+ L GD +L ++ S + N G
Sbjct: 68 FFIVFIIRSFIYEPFQIPSGSMMPTL-LIGDFILVKKFSYGIKEPITNKTIIKMNLPQRG 126
Query: 76 DVVLVRSPVVPRRIVTKRVIGMEGDRVSYVADPKS 110
D+V+ + P + KRV+G+ GD++ Y + K
Sbjct: 127 DIVVFKHPKNNIDYI-KRVVGLPGDKIQYDINRKK 160
>sp|P42959|LEPU_BACSU Signal peptidase I U OS=Bacillus subtilis (strain 168) GN=sipU PE=1
SV=1
Length = 187
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 28/129 (21%)
Query: 41 PALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVLVRSPVVPRRIVTKRVIGMEGD 100
P L G SM PT+ + +L ++ GD++++ R V KR+IG+ GD
Sbjct: 39 PFLIEGSSMAPTLK-DSERILVDKAVKWTGGFHRGDIIVIHDKKSGRSFV-KRLIGLPGD 96
Query: 101 RVS------YVADPKSSD-------------------KFETVVVPQGHVWIEGDNIYESN 135
+ Y+ D K + FE V VP G ++ GDN S
Sbjct: 97 SIKMKNDQLYINDKKVEEPYLKEYKQEVKESGVTLTGDFE-VEVPSGKYFVMGDNRLNSL 155
Query: 136 DSRKFGAVP 144
DSR +P
Sbjct: 156 DSRNGMGMP 164
>sp|P42668|LEP_BACLI Signal peptidase I OS=Bacillus licheniformis GN=lepB PE=3 SV=1
Length = 186
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 29/144 (20%)
Query: 20 KSLLVGKFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVL 79
K++++ L + ++ P L G SM PT++ G+ + + + GD+V+
Sbjct: 18 KAIIIAVVLALL--IRAFLFEPYLVEGTSMDPTLH-DGERLFVYKTVRYVGEFKRGDIVI 74
Query: 80 VRSPVVPRRIVTKRVIGMEGDRVSY-----------VADP--------------KSSDKF 114
+ V KR+IG+ GD V V++P K + F
Sbjct: 75 IDGDEKNVHYV-KRLIGLPGDTVQMKDDTLYINGKKVSEPYLSENRKEAEAVGVKLTGDF 133
Query: 115 ETVVVPQGHVWIEGDNIYESNDSR 138
V VP+G ++ GDN S DSR
Sbjct: 134 GPVKVPEGKYFVMGDNRQRSMDSR 157
>sp|Q57350|LEPQ_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=3
SV=1
Length = 185
Score = 33.1 bits (74), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 29/144 (20%)
Query: 20 KSLLVGKFFCCLHVVNTYVCTPALAYGPSMLPTINLTGDLVLAERISTRFNKVCPGDVVL 79
K++L+ + +V T++ P + G SM PT+ + + + GD+V+
Sbjct: 17 KAILIA--LILVFLVRTFLFEPYIVQGESMKPTL-FNSERLFVNKFVKYTGDFKRGDIVV 73
Query: 80 VRSPVVPRRIVTKRVIGMEGDRV-------------------------SYVADPKSSDKF 114
+ V KR+IG+ GD + ++ +D + F
Sbjct: 74 LNGEEKKTHYV-KRLIGLPGDTIEMKNDNLFVNGKRFNEEYLKENKKDAHDSDLNLTGDF 132
Query: 115 ETVVVPQGHVWIEGDNIYESNDSR 138
+ VP+ ++ GDN S DSR
Sbjct: 133 GPIKVPKDKYFVMGDNRQNSMDSR 156
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.142 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,035,380
Number of Sequences: 539616
Number of extensions: 2726738
Number of successful extensions: 4663
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 4563
Number of HSP's gapped (non-prelim): 80
length of query: 170
length of database: 191,569,459
effective HSP length: 109
effective length of query: 61
effective length of database: 132,751,315
effective search space: 8097830215
effective search space used: 8097830215
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)