Query 030879
Match_columns 170
No_of_seqs 118 out of 1096
Neff 8.2
Searched_HMMs 13730
Date Mon Mar 25 09:06:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030879.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030879hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rypk_ d.153.1.4 (K:) Proteas 100.0 3E-39 2.2E-43 244.8 18.9 151 15-165 1-154 (198)
2 d1ryp1_ d.153.1.4 (1:) Proteas 100.0 7.8E-39 5.6E-43 246.1 21.4 158 7-164 1-159 (222)
3 d1irul_ d.153.1.4 (L:) Proteas 100.0 5E-39 3.6E-43 244.1 20.0 148 16-164 1-148 (201)
4 d1irug_ d.153.1.4 (G:) Proteas 100.0 2.4E-39 1.8E-43 253.0 16.8 152 12-164 30-185 (245)
5 d1ryph_ d.153.1.4 (H:) Proteas 100.0 1.2E-38 8.8E-43 242.8 20.1 152 12-165 6-157 (205)
6 d1yarh1 d.153.1.4 (H:1-203) Pr 100.0 2.9E-38 2.1E-42 240.1 20.4 148 16-165 1-148 (203)
7 d1irud_ d.153.1.4 (D:) Proteas 100.0 1.3E-38 9.3E-43 248.5 18.2 153 12-165 25-181 (243)
8 d1rypl_ d.153.1.4 (L:) Proteas 100.0 3.9E-38 2.9E-42 241.0 19.5 150 16-165 1-150 (212)
9 d1iruc_ d.153.1.4 (C:) Proteas 100.0 1.1E-38 8.3E-43 249.7 16.6 152 11-162 26-181 (250)
10 d1yara1 d.153.1.4 (A:13-233) P 100.0 4.7E-38 3.4E-42 242.0 18.9 152 11-164 18-173 (221)
11 d1rypd_ d.153.1.4 (D:) Proteas 100.0 4.7E-38 3.4E-42 245.0 18.7 153 12-164 25-182 (241)
12 d1rypc_ d.153.1.4 (C:) Proteas 100.0 7.7E-38 5.6E-42 244.1 19.6 155 11-165 27-185 (244)
13 d1iruh_ d.153.1.4 (H:) Proteas 100.0 1.1E-37 8.3E-42 236.7 19.7 149 16-165 1-149 (202)
14 d1iruj_ d.153.1.4 (J:) Proteas 100.0 2.5E-37 1.8E-41 235.1 20.2 157 9-165 1-159 (204)
15 d1rypb_ d.153.1.4 (B:) Proteas 100.0 1.3E-37 9.3E-42 243.6 18.0 154 11-165 27-185 (250)
16 d1rype_ d.153.1.4 (E:) Proteas 100.0 7.1E-38 5.2E-42 244.0 16.4 153 12-165 23-185 (242)
17 d1irue_ d.153.1.4 (E:) Proteas 100.0 8.3E-38 6.1E-42 242.5 16.6 151 12-164 24-183 (234)
18 d1irui_ d.153.1.4 (I:) Proteas 100.0 4.7E-37 3.4E-41 236.1 20.6 147 16-164 1-147 (220)
19 d1rypj_ d.153.1.4 (J:) Proteas 100.0 6.6E-37 4.8E-41 232.3 21.2 156 9-165 2-159 (204)
20 d1irua_ d.153.1.4 (A:) Proteas 100.0 1.2E-37 9.1E-42 243.0 17.5 152 12-164 31-187 (244)
21 d1j2qh_ d.153.1.4 (H:) Proteas 100.0 4.8E-37 3.5E-41 232.7 20.2 148 16-164 1-149 (202)
22 d1rypa_ d.153.1.4 (A:) Proteas 100.0 8.7E-38 6.3E-42 243.7 16.0 154 12-166 26-184 (243)
23 d1iru1_ d.153.1.4 (1:) Proteas 100.0 1.5E-36 1.1E-40 230.9 22.5 156 7-162 1-156 (213)
24 d1iruf_ d.153.1.4 (F:) Proteas 100.0 1E-37 7.5E-42 242.7 14.8 150 12-165 26-179 (238)
25 d1ryp2_ d.153.1.4 (2:) Proteas 100.0 4.7E-37 3.4E-41 237.9 17.7 154 8-162 2-162 (233)
26 d1rypi_ d.153.1.4 (I:) Proteas 100.0 1.4E-36 1E-40 234.0 19.6 148 16-165 1-148 (222)
27 d1rypg_ d.153.1.4 (G:) Proteas 100.0 9.8E-37 7.1E-41 237.9 17.4 153 10-164 25-184 (244)
28 d1j2pa_ d.153.1.4 (A:) Proteas 100.0 2.2E-36 1.6E-40 235.8 19.3 150 12-164 28-181 (243)
29 d1rypf_ d.153.1.4 (F:) Proteas 100.0 1.1E-36 8.3E-41 236.1 16.9 147 11-161 27-177 (233)
30 d1iru2_ d.153.1.4 (2:) Proteas 100.0 1.8E-35 1.3E-39 226.8 16.6 153 7-161 1-156 (217)
31 d1irub_ d.153.1.4 (B:) Proteas 100.0 4.3E-35 3.1E-39 226.6 18.5 152 12-165 28-183 (233)
32 d1iruk_ d.153.1.4 (K:) Proteas 100.0 1.8E-34 1.3E-38 216.3 19.0 150 15-164 1-152 (199)
33 d1q5qa_ d.153.1.4 (A:) Proteas 100.0 2.6E-34 1.9E-38 222.0 18.3 147 11-165 15-169 (227)
34 d1q5qh_ d.153.1.4 (H:) Proteas 100.0 2.3E-33 1.7E-37 215.4 19.7 150 16-165 1-160 (224)
35 d1m4ya_ d.153.1.4 (A:) HslV (C 99.9 1.2E-22 8.4E-27 148.9 7.6 139 16-161 1-139 (171)
36 d2z3ba1 d.153.1.4 (A:1-180) Hs 99.9 1.4E-22 1E-26 150.0 5.1 142 12-165 2-149 (180)
37 d1g3ka_ d.153.1.4 (A:) HslV (C 99.8 8.2E-21 6E-25 139.3 11.0 139 16-161 1-140 (173)
38 d1l0oc_ a.4.13.2 (C:) SigmaF { 64.3 6.6 0.00048 21.4 4.5 33 67-99 10-42 (57)
39 d1rp3a1 a.4.13.1 (A:87-163) Si 58.0 9.8 0.00071 21.7 4.7 33 67-99 5-37 (77)
40 d1u94a2 d.48.1.1 (A:269-328) R 36.9 15 0.0011 20.3 2.9 28 130-157 16-43 (60)
41 d1ku2a1 a.4.13.1 (A:273-332) S 34.2 33 0.0024 18.6 4.8 29 70-98 10-38 (60)
42 d1mo6a2 d.48.1.1 (A:270-329) R 23.1 14 0.001 20.4 1.1 28 130-157 16-43 (60)
43 d1xp8a2 d.48.1.1 (A:283-341) R 22.0 12 0.00086 20.7 0.6 28 130-157 15-42 (59)
44 d1rtya_ a.25.2.2 (A:) Putative 21.8 62 0.0045 21.1 4.5 53 51-103 85-140 (161)
No 1
>d1rypk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3e-39 Score=244.77 Aligned_cols=151 Identities=19% Similarity=0.302 Sum_probs=143.7
Q ss_pred CCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCHHHH
Q 030879 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 94 (170)
Q Consensus 15 g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~l 94 (170)
|+|+|||+++||||||+|+|.++|.++.+++.+||++|++++++++||..+|++.+.++++.+++.|+++++++++++.+
T Consensus 1 m~tiigi~~~dgVvlaaD~r~s~g~~~~~~~~~KI~~I~~~i~~~~sG~~aD~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 80 (198)
T d1rypk_ 1 MDIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAV 80 (198)
T ss_dssp CCCEEEEECSSCEEEEEECCEEETTEEEESCCCCEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHH
T ss_pred CeEEEEEEECCEEEEEEcCCcccCCEeecCccceEEEecCCEEEEecCCcccHHHHHHHHHHHHHHHHHHhCCCcchHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh--cCCCeeEEEEEEEEcCC-CCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCCC
Q 030879 95 GQLLSNTLYYK--RFFPYYSFNVLGGLDNE-GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 95 a~~l~~~~~~~--r~~P~~v~~lv~G~d~~-g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
+++++..+|.. +.|||++++||||||++ ++|+||++||+|++.+++++++|+|+.+++++||+.|++++..
T Consensus 81 ~~~i~~~~~~~~~~~~P~~~~~liaG~D~~~~~p~L~~id~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~ 154 (198)
T d1rypk_ 81 SSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTT 154 (198)
T ss_dssp HHHHHHHHHHHTTSSSCCCEEEEEEEEETTTTEEEEEEECTTCCEEECSEEECTTHHHHHHHHHHHHCCTTCCH
T ss_pred HHHHHHHHHHHHhcccccceEEEEEEEecCCCceEEEEecccccEEecceEEEeccchhhHHHHHhcccccCCH
Confidence 99999999763 36899999999999974 6799999999999999999999999999999999999998764
No 2
>d1ryp1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=7.8e-39 Score=246.09 Aligned_cols=158 Identities=45% Similarity=0.759 Sum_probs=149.2
Q ss_pred CccccccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcC
Q 030879 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN 86 (170)
Q Consensus 7 ~~~~~~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~ 86 (170)
.|+|++++|+|+|||+++||||||+|+|.+.+.++..++.+||++|++++++++||..+|++.+.++++.+++.|++.++
T Consensus 1 ~~~py~~nG~Tivgi~~~dgVviaaD~r~s~~~~i~~~~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~ 80 (222)
T d1ryp1_ 1 QFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHN 80 (222)
T ss_dssp CCCCCCCCCCEEEEEECSSCEEEEEECCEEETTEEEESCCCCCEECSTTCEEEEEESHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCccCCCcEEEEEEECCEEEEEECCCcccCCEeccCCcceEEEecCCEEEEeccChHHHHHHHHHHHHHhhhhhhhcC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred -CCCCHHHHHHHHHHHHHhhcCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCC
Q 030879 87 -KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 164 (170)
Q Consensus 87 -~~~~~~~la~~l~~~~~~~r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~ 164 (170)
+.+++..++++++.+++..+.+||+++++|+|+|++++|+||.+||+|++.+++++|+|+|+++++++||+.|+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~G~d~~~~~~Ly~~D~~G~~~~~~~~a~G~g~~~a~~~Le~~~~~~~~ 159 (222)
T d1ryp1_ 81 DKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ 159 (222)
T ss_dssp TCCCCHHHHHHHHHHHHHTTTTSCCCEEEEEEEECTTSCEEEEEECTTSCEEEESEEEEETTHHHHHHHHHHHTSCTTC
T ss_pred CCCCcHHHHHHHHHHHHHhhhhhhheeeeeEEEEeCCCCeEEEEECCCcEEEEeceEEEcccHHHHHHHHHHhhccccc
Confidence 678999999999999888888999999999999999989999999999999999999999999999999999985433
No 3
>d1irul_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=5e-39 Score=244.05 Aligned_cols=148 Identities=25% Similarity=0.283 Sum_probs=143.2
Q ss_pred CeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 030879 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 95 (170)
Q Consensus 16 ~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~la 95 (170)
||+|||+++||||||+|++.++|.++.+++.+|||+|+++++|+++|..+|++.+.++++.+++.|+..++++++++.++
T Consensus 1 TT~igi~~~dgVvlaaD~~~t~g~~~~~~~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a 80 (201)
T d1irul_ 1 TTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAAS 80 (201)
T ss_dssp CCEEEEEETTEEEEEECCCEEETTEEEESCCCCEEEEETTEEEECCBCHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHH
T ss_pred CeEEEEEECCEEEEEEcCccccCCEeecCCcccEEEeCCcEEEEEcCccchHHHHHHHHHHHHHHHHHhcCCCCchhHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCC
Q 030879 96 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 164 (170)
Q Consensus 96 ~~l~~~~~~~r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~ 164 (170)
+++++++|..|.+||+++++++|+|+++ |+||.+||+|++.+++++|+|+|+++++++||+.|+++|.
T Consensus 81 ~~l~~~~~~~~~~p~~~~~lvaG~d~~~-~~l~~~d~~G~~~~~~~~a~G~g~~~~~~~Le~~~~~~ms 148 (201)
T d1irul_ 81 KLLANMVYQYKGMGLSMGTMICGWDKRG-PGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLE 148 (201)
T ss_dssp HHHHHHHHTTTTSCCCBEEEEEEECSSS-EEEEEEESSSCEEECSEEEESTTHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHhhhccCCCceEEEEEEEEecCC-ceEEEEccCceEEEeeeEEecCchHHHHHHHHhhccCCCC
Confidence 9999999988888999999999999765 9999999999999999999999999999999999999874
No 4
>d1irug_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=2.4e-39 Score=252.97 Aligned_cols=152 Identities=13% Similarity=0.130 Sum_probs=142.8
Q ss_pred ccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCH
Q 030879 12 DNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSC 91 (170)
Q Consensus 12 ~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~ 91 (170)
+++|+|+|||+++||||||+|++.+++ ++..++.+||++|+++++|++||+.+|++.+.++++.+++.|++.+++++++
T Consensus 30 v~~G~t~VGik~~dgVvlaad~~~~~~-~~~~~~~~Ki~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~g~~i~~ 108 (245)
T d1irug_ 30 VENSSTAIGIRCKDGVVFGVEKLVLSK-LYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPL 108 (245)
T ss_dssp HHTSCCEEEEECSSBEEEEEEEECSCT-TBCTTTTCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCH
T ss_pred HHcCCcEEEEEeCCEEEEEEecccccc-ccccCccceEEEcCCCEEEEeccCchhHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 689999999999999999999998876 4467888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH--Hhhc--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCC
Q 030879 92 PAMGQLLSNTL--YYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 164 (170)
Q Consensus 92 ~~la~~l~~~~--~~~r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~ 164 (170)
+.+++.+++++ |+++ .|||++++||+|+|++++|+||++||+|++.+++++|+|+|++.++++||+.|+++|.
T Consensus 109 ~~la~~la~~~~~~t~~~~~rP~~vs~li~G~D~~~gp~Ly~iDp~G~~~~~~~~a~G~gs~~a~~~Le~~~~~dmt 185 (245)
T d1irug_ 109 KHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMT 185 (245)
T ss_dssp HHHHHHHHHHHHHTTSBSSBCCCSEEEEEEEEETTTEEEEEEECTTCCEEEBSEEEESTTHHHHHHHHTTSCGGGCC
T ss_pred HHHHHHHHHHHHHhhccccccccceEEEEEEEcCCCCceEEEEcCCceEEeeeEEEECCccHHHHHHHHhhcCCCCC
Confidence 99999999987 4444 5899999999999988889999999999999999999999999999999999999875
No 5
>d1ryph_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.2e-38 Score=242.82 Aligned_cols=152 Identities=26% Similarity=0.350 Sum_probs=143.9
Q ss_pred ccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCH
Q 030879 12 DNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSC 91 (170)
Q Consensus 12 ~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~ 91 (170)
+++|+|+|||+++||||||+|+|.+.+.++.+++.+||++|+++++++++|..+|++.+.++++.+++.|+.+++++ ++
T Consensus 6 v~~GtTivgi~~~dgVvlaaD~r~s~g~~i~~~~~~ki~~i~~~i~~~~sG~~aD~~~l~~~~~~~~~~~~~~~~~~-~~ 84 (205)
T d1ryph_ 6 VSLGASIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTP-ST 84 (205)
T ss_dssp CBCCCCEEEEEETTEEEEEECCCEEETTEEEESSCCCEEEEETTEEEEEEEBHHHHHHHHHHHHHHHHHHHHHHSSC-CH
T ss_pred ccCcceEEEEEECCEEEEEECCccccCceeeccccceEEEccCceEEeeccchhHHHHHHHHHHHHHHHHHHHcCCc-cH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999975 57
Q ss_pred HHHHHHHHHHHHhhcCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCCC
Q 030879 92 PAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 92 ~~la~~l~~~~~~~r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
..+++.++.++|.++ +||++++||||+|++++|+||++||.|++.+++++|+|+|+.+++++||+.|++++..
T Consensus 85 ~~~~~~~~~~~~~~~-~p~~~~~lvaG~d~~~~p~Ly~~d~~G~~~~~~~~a~G~g~~~~~~~Le~~~~~~ms~ 157 (205)
T d1ryph_ 85 ETAASVFKELCYENK-DNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSK 157 (205)
T ss_dssp HHHHHHHHHHHHHTT-TTCCEEEEEEEEETTTEEEEEEECTTSCCEEESEEEESGGGGGGHHHHHHHCCTTCCH
T ss_pred HHHHHHHHHHHHhCc-cCceEEEEEEeecCCCCcEEEEECCCCcEEecCeEEeecCcHHHHHHHHhhhhcccCH
Confidence 889999999998766 7999999999999888899999999999999999999999999999999999998753
No 6
>d1yarh1 d.153.1.4 (H:1-203) Proteasome beta subunit (catalytic) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=100.00 E-value=2.9e-38 Score=240.10 Aligned_cols=148 Identities=26% Similarity=0.411 Sum_probs=142.2
Q ss_pred CeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 030879 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 95 (170)
Q Consensus 16 ~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~la 95 (170)
||+|||+++||||||+|+|.+.+.++.+++.+|||+|++++++++||..+|++.+.++++.+++.|+..++++++++.++
T Consensus 1 TT~igi~~kdgVvia~D~r~s~~~~~~~~~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a 80 (203)
T d1yarh1 1 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVA 80 (203)
T ss_dssp CCEEEEEETTEEEEEECCCEEETTEEEESCCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHH
T ss_pred CcEEEEEECCEEEEEECCCcccCCEeecCCcccEEEecCCeeeecCCCcchHHHHHHHHHHHHHHHHHhcCCCCcHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCCC
Q 030879 96 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 96 ~~l~~~~~~~r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
++++++++..|.|||++++|+||+|. +|+||.+||+|++.+++++|+|+|+++++++||+.|++++..
T Consensus 81 ~~l~~~~~~~~~~p~~~~~lvaG~d~--~p~l~~~d~~G~~~~~~~~a~G~g~~~~~~~L~~~~~~~~s~ 148 (203)
T d1yarh1 81 TLLSNMLNQVKYMPYMVQLLVGGIDT--APHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTV 148 (203)
T ss_dssp HHHHHHHHHTTTSCCCEEEEEEEESS--SEEEEEECTTCCEEEESEEEESTTHHHHHHHHHHHCCTTCCH
T ss_pred HHHHHHHHhhccCCccceeEEEEEcC--CCeeEecCCccceecccccccCCCcHHHHHHHHHhccCCCCH
Confidence 99999998888899999999999984 399999999999999999999999999999999999998753
No 7
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.3e-38 Score=248.46 Aligned_cols=153 Identities=19% Similarity=0.271 Sum_probs=143.7
Q ss_pred ccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCH
Q 030879 12 DNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSC 91 (170)
Q Consensus 12 ~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~ 91 (170)
+++|+|+|||+++||||||+|++.+ +.++.+++.+|||+|+++++|++||+.+|++.+.++++.+++.|++.+++++++
T Consensus 25 v~~G~Tvvgik~~dgVvla~d~r~~-~~~~~~~~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~i~v 103 (243)
T d1irud_ 25 VKKGSTAVGVRGRDIVVLGVEKKSV-AKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTV 103 (243)
T ss_dssp HHTSCCEEEECCSSEEEEEECCCCC-CSSSCGGGGCSEEESSSSCEEEEEECHHHHHHHHHHHHHHHHHHHHHSSSCCCH
T ss_pred HhcCCCEEEEEeCCEEEEEEecccc-CcccCCCccccEEECCCCEEEEEEEchhhHHHHHHHHHHHHHHHHHhcCCCccH
Confidence 6799999999999999999999976 567888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH--Hhhc--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCCC
Q 030879 92 PAMGQLLSNTL--YYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 92 ~~la~~l~~~~--~~~r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
+.+++++++++ |+++ .|||++++||+|+|++++|+||++||+|++.+++++|+|+|++.++++||+.|++++..
T Consensus 104 ~~la~~ls~~~~~~t~~~~~rp~~v~~li~G~D~~~~p~Ly~idp~G~~~~~~~~a~G~gs~~a~~~Lek~~~~~~~~ 181 (243)
T d1irud_ 104 EYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIE 181 (243)
T ss_dssp HHHHHHHHHHHHHTTSBTTBCCCCEEEEEEEECSSSCEEEEEECTTSCEEEBSEEEESTTHHHHHHHHTTTCCSSTTC
T ss_pred HHHHHHHHHHHHHHHhcccCCccceEEEEEEEcCCCCCEEEEecCcEEEEeccEEEECCChHHHHHHHHHhcccCCCc
Confidence 99999999998 3433 58999999999999887899999999999999999999999999999999999998753
No 8
>d1rypl_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.9e-38 Score=240.96 Aligned_cols=150 Identities=19% Similarity=0.218 Sum_probs=144.5
Q ss_pred CeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 030879 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 95 (170)
Q Consensus 16 ~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~la 95 (170)
||+|||++|||||||+|+|.++|.++..++.+|||+|+++++|+++|..+|++.+.++++.+++.|+..++++++++.++
T Consensus 1 TT~iai~~kdgVvlaaD~r~t~g~~i~~~~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a 80 (212)
T d1rypl_ 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKRVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAAS 80 (212)
T ss_dssp CCEEEEEETTEEEEEECCCEEETTEEEESCCCCEEEEETTEEEECCBCHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHH
T ss_pred CeEEEEEECCEEEEEEcCccccCceeecCCcceEEEECCcEEEEeccchHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCCC
Q 030879 96 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 96 ~~l~~~~~~~r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
+++++++|.++..|+++..+++|+|++++|+||.+||+|++.+++++|+|+|+++++++||+.|++++..
T Consensus 81 ~~ls~~~~~~~~~p~~~~~~l~G~~~~~g~~Ly~id~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~mt~ 150 (212)
T d1rypl_ 81 KILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSV 150 (212)
T ss_dssp HHHHHHHHHTTTSCCCBEEEEEEEETTTEEEEEEEETTCCEEECSEEEESTTHHHHHHHHHHHCCTTCCH
T ss_pred HHHHHHHHHhccCCcceEeeeeEeecCCCCEEEEECCCceEEecceEEEccCcccchhHHHHhccCCCCH
Confidence 9999999987778999999999999888899999999999999999999999999999999999998753
No 9
>d1iruc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.1e-38 Score=249.70 Aligned_cols=152 Identities=20% Similarity=0.182 Sum_probs=143.7
Q ss_pred cccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCC
Q 030879 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMS 90 (170)
Q Consensus 11 ~~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~ 90 (170)
++++|+|+|||+++||||||+|++.+++.++.++..+|||+|++++++++||+.+|++.+.++++.++..|++.++++++
T Consensus 26 av~~G~tvvgik~~dgVvlaad~~~~~~~~~~~~~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~r~~~~~~~~~~~~~i~ 105 (250)
T d1iruc_ 26 AIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIP 105 (250)
T ss_dssp HHTTSCCEEEEBCSSEEEEEECCCCCCTTBCCCSSCSSEEECSSSEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHhcCCcEEEEEeCCEEEEEEeCccccCCcccCcccceEEECCCcEEEEeecccchHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 46889999999999999999999999998888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh--c--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCC
Q 030879 91 CPAMGQLLSNTLYYK--R--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP 162 (170)
Q Consensus 91 ~~~la~~l~~~~~~~--r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~ 162 (170)
++.+++.++.+++.. . .|||++++||+|+|++++|+||.+||+|++.+++++|+|+|+++++++||+.|++.
T Consensus 106 ~~~la~~l~~~~~~~~~~~~~rP~~~~~li~G~D~~~gp~Ly~~Dp~G~~~~~~~~a~G~gs~~a~~~Le~~y~~~ 181 (250)
T d1iruc_ 106 CEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEG 181 (250)
T ss_dssp HHHHHHHHHHHHHHTTTBSSCCCCCEEEEEEEEETTTEEEEEEEETTTEEEECSEEEESTTTTHHHHHHHHHCCTT
T ss_pred hHHHHHHHHHHHHHHhhhccCCcceEEEEEEEEcCCCCCEEEEEcccccEeeeeEEEeCcChHHHHHHHHhhcccC
Confidence 999999999999543 2 48999999999999887899999999999999999999999999999999999863
No 10
>d1yara1 d.153.1.4 (A:13-233) Proteasome alpha subunit (non-catalytic) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=100.00 E-value=4.7e-38 Score=241.98 Aligned_cols=152 Identities=17% Similarity=0.249 Sum_probs=141.3
Q ss_pred cccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCC
Q 030879 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMS 90 (170)
Q Consensus 11 ~~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~ 90 (170)
++++|+|+|||+++||||||+|++.+. .++..++.+||++|+++++++++|+.+|++.+.++++.+++.|+..++++++
T Consensus 18 av~~G~t~vgi~~~dgVvlaad~r~~~-~~~~~~~~~Ki~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~ 96 (221)
T d1yara1 18 AVKKGSTALGMKFANGVLLISDKKVRS-RLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVN 96 (221)
T ss_dssp HHTTSCCEEEEEETTEEEEEECCCCCC-TTBCSTTCCSEEEEETTEEEEEEEBHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHhcCCcEEEEEeCCEEEEEEecccCC-cccccCccceEEEecCCceEEeeeccchHHHHHHHHHHHHHHHHHHcCCcch
Confidence 457899999999999999999999874 4667788899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh--hc--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCC
Q 030879 91 CPAMGQLLSNTLYY--KR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 164 (170)
Q Consensus 91 ~~~la~~l~~~~~~--~r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~ 164 (170)
++.+++.++.+++. ++ .|||++++||||+|++ +|+||++||+|++.+++++|+|+|+++++++||+.|++++.
T Consensus 97 ~~~l~~~~a~~~~~~~~~~~~rP~~~~~li~G~d~~-gp~Ly~id~~G~~~~~~~~a~G~g~~~~~~~Le~~~~~~ms 173 (221)
T d1yara1 97 IENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQI-GPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLP 173 (221)
T ss_dssp HHHHHHHHHHHHHHTTTBTTBCCCCEEEEEEEECSS-CEEEEEECTTCCEEEBSEEEESTTHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcceEEEEEEEecC-CCeEEEEcCCccEEEeeEEEECCchHHHHHHHHHHhhcccc
Confidence 99999999999843 22 5899999999999965 49999999999999999999999999999999999999875
No 11
>d1rypd_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.7e-38 Score=244.99 Aligned_cols=153 Identities=16% Similarity=0.252 Sum_probs=143.1
Q ss_pred ccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCH
Q 030879 12 DNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSC 91 (170)
Q Consensus 12 ~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~ 91 (170)
+++|+|+|||+++||||||+|++.+++.++...+.+||++|+++++|++||+.+|++.+.+.++.+++.|+..+++++++
T Consensus 25 v~~G~tvIgik~~dgVvlaad~~~~~~~~~~~~~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~i~~ 104 (241)
T d1rypd_ 25 VKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTV 104 (241)
T ss_dssp HTTSCCEEEEECSSCEEEEEECCCSSCCBCTTTSCCSEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCH
T ss_pred HHcCCCEEEEEeCCEEEEEEEccccccCcccccccccEEEeCCCEEEEeeeccchHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence 57899999999999999999999999977777788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH--hhc--CCCeeEEEEEEEEcCC-CCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCC
Q 030879 92 PAMGQLLSNTLY--YKR--FFPYYSFNVLGGLDNE-GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 164 (170)
Q Consensus 92 ~~la~~l~~~~~--~~r--~~P~~v~~lv~G~d~~-g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~ 164 (170)
+.+++.++.+++ +++ .|||++++||||+|++ ++|+||++||+|++.+++++|+|+|+++++++||+.|+++++
T Consensus 105 ~~la~~i~~~~~~~t~~~~~rP~~v~~li~G~d~~~~~p~Ly~idp~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~ 182 (241)
T d1rypd_ 105 EYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEP 182 (241)
T ss_dssp HHHHHHHHHHHHHTTSSTTBCCCSEEEEEEECCTTCCSCEEEEECTTSCEEEBSEEEESTTHHHHHHHHHTTCCTTSC
T ss_pred HHHHHHHHHHHHHHhhccccCcccceEEEEEEccccCcceEEEecCCEEEEeeCeEEECcCHHHHHHHHHHhhhcccC
Confidence 999999999984 333 5899999999999964 579999999999999999999999999999999999988754
No 12
>d1rypc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=7.7e-38 Score=244.11 Aligned_cols=155 Identities=21% Similarity=0.247 Sum_probs=146.2
Q ss_pred cccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCC
Q 030879 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMS 90 (170)
Q Consensus 11 ~~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~ 90 (170)
++++|+|+|||+++||||||+|++.+++.++.+++.+||++|++++++++||+.+|++.+.++++.+++.|+.+++++++
T Consensus 27 ai~~G~T~vgi~~~dgVvlaad~r~s~~~~~~~~~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~ 106 (244)
T d1rypc_ 27 SISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIP 106 (244)
T ss_dssp HHTTSCCEEEEEETTEEEEEEECSSCCSSBCSTTCCSSEEESSSSEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHhcCCCEEEEEeCCEEEEEEeCCccCCCcccCCccceEEEcCCCeEEEEecccCcHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 35789999999999999999999999998888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH--hhc--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCCC
Q 030879 91 CPAMGQLLSNTLY--YKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 91 ~~~la~~l~~~~~--~~r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
++.+++.++++++ .++ .|||++++||+|+|++++|+||.+||+|++.+++++|+|+|+++++++||+.|++++..
T Consensus 107 ~~~~~~~l~~~~~~~~~~~~~rP~~~~~ll~G~d~~~gp~Ly~id~~Gs~~~~~~~a~G~g~~~a~~~Le~~~~~~ms~ 185 (244)
T d1rypc_ 107 VEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKV 185 (244)
T ss_dssp HHHHHHHHHHHHHHHHHBSSCCCCCEEEEEEEEETTTEEEEEEECTTCCEEEBSEEEESTTHHHHHHHHHHHCCTTCCH
T ss_pred HHHHHHHHHHHHhhhhhccccCccceeEEEEEEecCCCceEEEecCCCcEeeeeeeeccchhHHHHHHHHhcccCCCCH
Confidence 9999999999984 333 68999999999999887899999999999999999999999999999999999998753
No 13
>d1iruh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.1e-37 Score=236.67 Aligned_cols=149 Identities=23% Similarity=0.260 Sum_probs=143.8
Q ss_pred CeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 030879 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 95 (170)
Q Consensus 16 ~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~la 95 (170)
||+|||+++||||||+|+|.++|.++.+++.+||++|+++++++++|..+|++.+.++++.+++.|+..++++++++.++
T Consensus 1 TTivai~~~dgVvlaaD~r~t~g~~i~~~~~~KI~~i~~~i~~~~sG~~aD~~~l~~~~~~~~~~~~~~~~~~~~~~~~a 80 (202)
T d1iruh_ 1 TTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAA 80 (202)
T ss_dssp CCEEEEEETTEEEEEECCCEEETTEEEESSCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred CeEEEEEECCEEEEEECCccccCCeeecCCcceEEEcCCcEEEEeccchHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCCC
Q 030879 96 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 96 ~~l~~~~~~~r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
+++++++|..| +||++++|++|+|++++|+||.+||.|++.+.+++++|+|+++++++||+.|++++..
T Consensus 81 ~~l~~~l~~~~-~p~~~~~lvaG~d~~~~~~l~~~d~~g~~~~~~~~a~G~g~~~a~~~L~~~~~~~~~~ 149 (202)
T d1iruh_ 81 SLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTK 149 (202)
T ss_dssp HHHHHHHHHTT-TTCCEEEEEEEEETTTEEEEEEECTTSCCEECSEEEESGGGGGGHHHHHHHCCTTCCH
T ss_pred HHHHHHHHhhc-cceeEEEEEEEeecCCCcEEEEECCCCceeecceeEEeCCHHHHHHHHHHhhccCCcH
Confidence 99999998766 7999999999999888899999999999999999999999999999999999998753
No 14
>d1iruj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=2.5e-37 Score=235.10 Aligned_cols=157 Identities=24% Similarity=0.406 Sum_probs=147.9
Q ss_pred cccccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCC
Q 030879 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 88 (170)
Q Consensus 9 ~~~~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~ 88 (170)
|++..+|+|+|||+++||||||+|+|.+.+.++..++.+||++|+++++++++|..+|++.+.++++.+++.|+.+++.+
T Consensus 1 ~~~~~nG~Tvigi~~~dgVvlaaD~r~s~g~~~~~~~~~Ki~~I~~~i~~~~sG~~aD~~~l~~~~~~~~~~~~~~~~~~ 80 (204)
T d1iruj_ 1 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQ 80 (204)
T ss_dssp CCTTSSCCEEEEEECSSEEEEEEECCEEETTEEEESCCCCEEECSTTEEEECCSCHHHHHHHHHHHHHHHHHHHHHSSSC
T ss_pred CCeeeCCceEEEEEECCEEEEEECCCcccCCeeEcCcccEEEEeCCCeEEEeccCchHHHHHHHHHHHhhhhhhhhcccc
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCeeEEEEEEEEcCC-CCeEEEEECCCCceee-eCeEEEccChhhhHHHHhccCCCCCCC
Q 030879 89 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 89 ~~~~~la~~l~~~~~~~r~~P~~v~~lv~G~d~~-g~p~L~~id~~G~~~~-~~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
++++.+++++++++|..+.+||++++||||+|++ ++|.+|.+|+.|.... ..++++|+|+++++++||+.|++++..
T Consensus 81 ~~~~~~a~~l~~~~~~~~~~p~~~~~lvaG~D~~~~~~~~~~~d~~g~~~~~~~~~~~G~g~~~~~~~l~~~~~~~ms~ 159 (204)
T d1iruj_ 81 IKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDP 159 (204)
T ss_dssp CCHHHHHHHHHHHHHTTTTSCCSCCCEEEEECTTSCCEEEEEECTTCCEEECSSEEEEETTHHHHHHHHHHHCCSSCCH
T ss_pred cchHHHHHHHHHHHHHhhhccceeEEEEEEEcCCCCceEEEEecCCCceeeecceEEechhHHHHHHHHHhccccCCCH
Confidence 9999999999999998877899999999999976 4689999999998765 568999999999999999999998864
No 15
>d1rypb_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.3e-37 Score=243.65 Aligned_cols=154 Identities=19% Similarity=0.191 Sum_probs=142.0
Q ss_pred cccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHH-HHHhcCCCC
Q 030879 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI-YQHQHNKQM 89 (170)
Q Consensus 11 ~~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~-~~~~~~~~~ 89 (170)
++++|+|+|||+++||||||+|++.+++ ++..++.+||++|+++++|++||+.+|++.+.++++.+++. |+..+++++
T Consensus 27 av~~G~tvvgi~~~dgVvlaad~r~~~~-~~~~~~~~ki~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~y~~~~~~~~ 105 (250)
T d1rypb_ 27 AVKQGVTSLGIKATNGVVIATEKKSSSP-LAMSETLSKVSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYP 105 (250)
T ss_dssp HHHTSCCEEEEEETTEEEEEEECCCSCS-SBCGGGCCSSEEEETTEEEEEEECHHHHHHHHHHHHHHHHHTTHHHHSSCC
T ss_pred HHHcCCCEEEEEeCCEEEEEEecccCCc-cccccccceeEeccCCEEEEeeecccHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4678999999999999999999998876 45678899999999999999999999999999999999864 889999999
Q ss_pred CHHHHHHHHHHHH--Hhhc--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCCC
Q 030879 90 SCPAMGQLLSNTL--YYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 90 ~~~~la~~l~~~~--~~~r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
+++.+++.+++++ |.++ .|||++++||+|+|++++|+||++||+|++.+++++|+|+|+++++++||+.|+++|..
T Consensus 106 ~~~~la~~~~~~~~~~~~~~~~rp~~v~~li~G~D~~~gp~Ly~id~~G~~~~~~~~a~G~gs~~a~~~Le~~~~~~ms~ 185 (250)
T d1rypb_ 106 PTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELEL 185 (250)
T ss_dssp CHHHHHHHHHHHHHHTTTSBTBCCCCEEEEEEEEETTTEEEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHCCTTCCH
T ss_pred CHHHHHHHHHHHHHHHhhhcCCcCeeEEEEEEEecCCCCCEEEEEcCcEEEEEeeEEecCcchHHHHHHHHHhcccCCCH
Confidence 9999999999998 3333 58999999999999877799999999999999999999999999999999999998753
No 16
>d1rype_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=7.1e-38 Score=243.96 Aligned_cols=153 Identities=18% Similarity=0.208 Sum_probs=142.8
Q ss_pred ccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCH
Q 030879 12 DNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSC 91 (170)
Q Consensus 12 ~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~ 91 (170)
+++|+|+|||+++||||||+|++.+++ ++..++.+|||+|+++++|++||+.+|++.+.++++.+++.|+..+++++++
T Consensus 23 ~~~G~t~Vgi~~~dgVvla~d~r~~~~-~~~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~ 101 (242)
T d1rype_ 23 IKLGSTAIGIATKEGVVLGVEKRATSP-LLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINV 101 (242)
T ss_dssp HTTSCCEEEEECSSCEEEEEECCCSST-TBCGGGCCCEEEEETTEEEEEEESGGGHHHHHHHHHHHHHHHHHHHSSCCCH
T ss_pred HHcCCCEEEEEeCCEEEEEEeCCccCc-CcccCccceEEEcCCCEEEEEeecchhHHHHHHHHHHHHHHHHHHcCCCCch
Confidence 578999999999999999999999987 6667888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH--hh--------cCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCC
Q 030879 92 PAMGQLLSNTLY--YK--------RFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 161 (170)
Q Consensus 92 ~~la~~l~~~~~--~~--------r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~ 161 (170)
+.++++++++++ ++ +.|||++++||+|+|++++|+||.+||+|++.+++++|+|+|+++++++||+.|++
T Consensus 102 ~~l~~~l~~~~~~~~~~~~~~~~~~~rP~~~~~ii~G~D~~~~p~L~~idp~G~~~~~~~~a~G~gs~~~~~~Le~~~~~ 181 (242)
T d1rype_ 102 ESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHS 181 (242)
T ss_dssp HHHHHHHHTTTTCCBSSCTTSCCCBSSCCSEEEEEEEEETTTEEEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHCCT
T ss_pred hHHHHHHHHHHHHHhccccccchhccccceEEEEEEEeccccceEEEEEcCCCceeccceeecccchHHHHHHHHHhccC
Confidence 999999999873 21 14899999999999988889999999999999999999999999999999999999
Q ss_pred CCCC
Q 030879 162 PSPL 165 (170)
Q Consensus 162 ~~~~ 165 (170)
++..
T Consensus 182 ~ms~ 185 (242)
T d1rype_ 182 SLTL 185 (242)
T ss_dssp TCCH
T ss_pred CCCH
Confidence 8753
No 17
>d1irue_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=8.3e-38 Score=242.54 Aligned_cols=151 Identities=20% Similarity=0.230 Sum_probs=140.6
Q ss_pred ccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCH
Q 030879 12 DNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSC 91 (170)
Q Consensus 12 ~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~ 91 (170)
+++|+|+|||+++||||||+|++.+.+ ++..+..+||++|++++++++||+.+|++.+.+.++.++..|+..+++++++
T Consensus 24 v~~G~t~vgik~~dgVvlaad~~~~~~-~~~~~~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~i~~ 102 (234)
T d1irue_ 24 IKLGSTAIGIQTSEGVCLAVEKRITSP-LMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTV 102 (234)
T ss_dssp HTTSCCEEEEEETTEEEEEEECCCCCT-TBCTTSCCSEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCH
T ss_pred HHcCCCEEEEEeCCEEEEEEecCccCC-CcccCcccCEEEccCcEEEEEeeccchHHHHHHHHHHHHHHHHHhhCCCCCH
Confidence 678999999999999999999999887 4557888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH--hh-------cCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCC
Q 030879 92 PAMGQLLSNTLY--YK-------RFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP 162 (170)
Q Consensus 92 ~~la~~l~~~~~--~~-------r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~ 162 (170)
+.++++++++++ ++ +.|||++++|+||||++| |+||++||+|++.+++++|+|+|+++++++||+.|+++
T Consensus 103 ~~la~~i~~~~~~~t~~~~~~~~~~rP~~~~~il~G~D~~g-p~Ly~idp~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~ 181 (234)
T d1irue_ 103 ESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKG-PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQELYHKS 181 (234)
T ss_dssp HHHHHHHHTTTTCBCSTTCCSSCBSSCCCEEEEEEEEETTE-EEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHHhhcccccccccccceEEEEEEEEcCCC-CEEEEEecCcccceeeeEEeCCchHHHHHHHHHhhccC
Confidence 999999999883 22 258999999999999765 99999999999999999999999999999999999998
Q ss_pred CC
Q 030879 163 SP 164 (170)
Q Consensus 163 ~~ 164 (170)
+.
T Consensus 182 ~~ 183 (234)
T d1irue_ 182 MT 183 (234)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 18
>d1irui_ d.153.1.4 (I:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=4.7e-37 Score=236.14 Aligned_cols=147 Identities=22% Similarity=0.304 Sum_probs=141.3
Q ss_pred CeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 030879 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 95 (170)
Q Consensus 16 ~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~la 95 (170)
||+|||+++||||||+|+|.++|.++.+++.+||++|+++++++++|..+|++.+.++++.+++.|+++++++++++.++
T Consensus 1 TTivgi~~~dgVvlaaD~r~s~g~~i~~~~~~KI~~i~~~i~~~~aG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a 80 (220)
T d1irui_ 1 TTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTAN 80 (220)
T ss_dssp CCEEEEEETTEEEEEECCCEESSSBEEESSCCCEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHCSCCCHHHHH
T ss_pred CeEEEEEECCEEEEEEcCCcccCCEeecCCcccEEEecCcEEEEEccccHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCC
Q 030879 96 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 164 (170)
Q Consensus 96 ~~l~~~~~~~r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~ 164 (170)
+++++++|..| +|+++++|+||+|.++ |+||++||.|++.+++++|+|+|+++++++||+.|++++.
T Consensus 81 ~~l~~~~y~~~-~p~~~~~ivaG~D~~g-~~L~~id~~G~~~~~~~~a~Gsgs~~a~~~L~~~~~~~~s 147 (220)
T d1irui_ 81 RMLKQMLFRYR-GYIGAALVLGGVDVTG-PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDME 147 (220)
T ss_dssp HHHHHHHHHTT-TCSCEEEEEEEECSSC-EEEEEECTTSCEEECSEEEESTTHHHHHHHHHHSCCTTCC
T ss_pred HHHHhhhhhcc-cccceeEEEEEEeCCC-cEEEEEeCCCcEEEeeEEEEccccHHHHHHHHHhcccCCC
Confidence 99999998765 7999999999999765 9999999999999999999999999999999999999875
No 19
>d1rypj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=6.6e-37 Score=232.34 Aligned_cols=156 Identities=23% Similarity=0.455 Sum_probs=146.9
Q ss_pred cccccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCC
Q 030879 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 88 (170)
Q Consensus 9 ~~~~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~ 88 (170)
+|...+|+|+|||+++||||||+|++.+++.++..++.+|||++ ++++++++|..+|++.+.++++.+++.|+++++++
T Consensus 2 ~p~~~nG~Tivgi~~~d~VvlaaD~r~~~~~~~~~~~~~Ki~~i-~~i~~~~~G~~~D~~~l~~~~~~~~~~~~~~~~~~ 80 (204)
T d1rypj_ 2 DPSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHY-GHVFLGITGLATDVTTLNEMFRYKTNLYKLKEERA 80 (204)
T ss_dssp CGGGSSCCEEEEEECSSEEEEEEECCEEETTEEEESCCCCEEEE-TTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCccCCeEEEEEEECCEEEEEEcCCcccCCEeecCcccEEEEc-CCEEEEecCcchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 68888999999999999999999999999999999999999999 58999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCeeEEEEEEEEcCC-CCeEEEEECCCCceeeeC-eEEEccChhhhHHHHhccCCCCCCC
Q 030879 89 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 89 ~~~~~la~~l~~~~~~~r~~P~~v~~lv~G~d~~-g~p~L~~id~~G~~~~~~-~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
++++.+++++++.+|.++.+||+++++++|||++ +.|+||++||+|++.+.+ ++++|+|++++++.||+.|++++..
T Consensus 81 ~~~~~la~~l~~~l~~~~~~p~~v~~li~G~d~~~g~~~L~~~D~~G~~~~~~~~~~~G~g~~~a~~~l~~~~~~~ms~ 159 (204)
T d1rypj_ 81 IEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEP 159 (204)
T ss_dssp CCHHHHHHHHHHHHHTTTTSCCCEEEEEEEECTTTCCEEEEEECTTCCEECCSSEEEEETTHHHHHHHHHHHCCSSCCH
T ss_pred CcchHHHHHHHHHHHhhcccceeeeEEEEEEecCCCcceEEEeCCCCccccccCcEEeecchHHHHHHHHhccccCCCH
Confidence 9999999999999998877899999999999964 669999999999988764 8999999999999999999998753
No 20
>d1irua_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.2e-37 Score=243.00 Aligned_cols=152 Identities=18% Similarity=0.246 Sum_probs=139.0
Q ss_pred ccCC-CeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCC
Q 030879 12 DNNG-GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMS 90 (170)
Q Consensus 12 ~~~g-~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~ 90 (170)
+++| +|+|||+++||||||+|++.+++ ++..++.+||++|+++++|++||+.+|++.+.+.++.+++.|++.++++++
T Consensus 31 v~~gg~t~igIk~~dgVVlaad~r~~~~-~~~~~~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~r~~~~~~~~~~~~~~~ 109 (244)
T d1irua_ 31 INQGGLTSVAVRGKDCAVIVTQKKVPDK-LLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIP 109 (244)
T ss_dssp HHTTCCEEEEEECSSEEEEEEECCCCCS-SBCGGGCCSEEESSSSCEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHhCCccEEEEEcCCEEEEEEecccccc-cccCCccceEEEecCCcEEEEecchHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4555 68999999999999999998855 555778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh--h--cCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCC
Q 030879 91 CPAMGQLLSNTLYY--K--RFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 164 (170)
Q Consensus 91 ~~~la~~l~~~~~~--~--r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~ 164 (170)
++.+++.++++++. + +.|||++++||||||++++|+||++||+|++.+++++|+|+|+..++++||+.|++...
T Consensus 110 v~~la~~l~~~~~~~t~~~~~rP~~v~~ll~G~D~~~g~~Ly~~Dp~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~d 187 (244)
T d1irua_ 110 VDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFD 187 (244)
T ss_dssp HHHHHHHHHHHHHHHHHBSSBCCCSEEEEEEEEETTTEEEEEEECTTSCEEEBSEEEEETTHHHHHHHHHHHTTSCCC
T ss_pred chHHHHHHHHHHHHHhcccccCccceeeEEEEEcCCCCcEEEEEcCCccEEecceEeccCchhHHHHHHHhccccccC
Confidence 99999999998843 2 36899999999999987779999999999999999999999999999999999976543
No 21
>d1j2qh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=100.00 E-value=4.8e-37 Score=232.67 Aligned_cols=148 Identities=27% Similarity=0.447 Sum_probs=141.2
Q ss_pred CeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 030879 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 95 (170)
Q Consensus 16 ~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~la 95 (170)
||+|||+++||||||+|+|.+.+.++.+++.+|||+|+++++|++||..+|++.+.++++.+++.|+..++++++++.++
T Consensus 1 TT~vgi~~~dgVvlaaD~r~s~~~~~~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a 80 (202)
T d1j2qh_ 1 TTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIA 80 (202)
T ss_dssp CCEEEEEETTEEEEEEECCEEETTEEEESSCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHH
T ss_pred CcEEEEEECCEEEEEECCCcccCCeeccCccceEEEecCcEEEEecCcchhHHHHHHHHHHHhhhhhhccCCCccHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCeeEEEEEEEEcCCCCeEEEEECCCCceeee-CeEEEccChhhhHHHHhccCCCCCC
Q 030879 96 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSP 164 (170)
Q Consensus 96 ~~l~~~~~~~r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~-~~~aiG~g~~~~~~~Le~~~~~~~~ 164 (170)
+++++++|..|.+||++++|+||+|+++ |+||.+||+|.+.+. +++|+|+|+++++++||+.|++++.
T Consensus 81 ~~~~~~~~~~~~~p~~~~~lvaG~d~~~-~~l~~~d~~G~~~~~~~~~a~G~g~~~~~~~Le~~~~~~ms 149 (202)
T d1j2qh_ 81 TLTSNLLNSYRYFPYLVQLLIGGIDSEG-KSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIG 149 (202)
T ss_dssp HHHHHHHHHTTTSCCCEEEEEEEEETTE-EEEEEECTTCCEEEESSEEEESTTHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHhhhcccceeeEEEEEEEcCCC-ceEEEEeCCCCeEeecceEEccCChHHHHHHHHhhcCCCCC
Confidence 9999999888888999999999999765 999999999998765 5999999999999999999999875
No 22
>d1rypa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=8.7e-38 Score=243.67 Aligned_cols=154 Identities=18% Similarity=0.200 Sum_probs=141.9
Q ss_pred ccC-CCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCC
Q 030879 12 DNN-GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMS 90 (170)
Q Consensus 12 ~~~-g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~ 90 (170)
+++ |+|+|||+++||||||+|+|.+++ ++..+..+||++|+++++|++||+.+|++.+.++++.+++.|+..++++++
T Consensus 26 v~~~g~T~igik~~dgVvlaad~r~~~~-l~~~~~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~ 104 (243)
T d1rypa_ 26 TNQTNINSLAVRGKDCTVVISQKKVPDK-LLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMP 104 (243)
T ss_dssp TTTTCCCEEEEECSSEEEEEEECCCCCT-TBCGGGCCSEEECSSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHccCceEEEEEcCCEEEEEEecccccc-ccccCcccceEecCCCEEEEEecCcHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 444 669999999999999999998864 677888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH--hhc--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCCCC
Q 030879 91 CPAMGQLLSNTLY--YKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL 166 (170)
Q Consensus 91 ~~~la~~l~~~~~--~~r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~~~ 166 (170)
++.+++.++++++ +++ .|||++++||+|||++++|+||++||+|++.+++++|+|+|+.+++++||+.|++++...
T Consensus 105 ~~~~a~~ls~~~~~~~~~~~~rP~~v~~ll~G~D~~~g~~Ly~~Dp~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~ 184 (243)
T d1rypa_ 105 CDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDH 184 (243)
T ss_dssp HHHHHHHHHHHHHHHHHBTTSCCCSCEEEEEEEETTTEEEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHHHHHhhcccccCccceEEEEEEccCCCCeEEEEcCCEEEEecceEEeCccHHHHHHHHHHHhhcccccc
Confidence 9999999999883 333 689999999999998888999999999999999999999999999999999999876543
No 23
>d1iru1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.5e-36 Score=230.94 Aligned_cols=156 Identities=49% Similarity=0.887 Sum_probs=150.3
Q ss_pred CccccccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcC
Q 030879 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN 86 (170)
Q Consensus 7 ~~~~~~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~ 86 (170)
+|+|++++|+|+|||+++||||||+|+|.++|.++..++.+||++|+++++++++|..+|++.+.++++.+++.|+..++
T Consensus 1 ~f~p~~~nG~Tivai~~~dgVviaaD~r~t~g~~~~~~~~~KI~~i~~~i~~~~aG~~~D~~~l~~~~~~~~~~~~~~~~ 80 (213)
T d1iru1_ 1 RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNN 80 (213)
T ss_dssp CCCSCCCCCCEEEEEEETTEEEEEEECCEEETTEEEESCCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCccCCCcEEEEEEECCEEEEEECCccccCceeeccccCEEEEcCCCEEEEecCccchHHHHHHHHHHHHHHHHHhhC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCC
Q 030879 87 KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP 162 (170)
Q Consensus 87 ~~~~~~~la~~l~~~~~~~r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~ 162 (170)
.+++++.+++.++..++.++.+|++++.+++|+|.+++|.+|.+|+.|.+.+++++++|+|++++++.||+.|+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~l~~~d~~g~~~~~~~~a~G~g~~~a~~~l~~~~~~~ 156 (213)
T d1iru1_ 81 KAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFK 156 (213)
T ss_dssp SCCCHHHHHHHHHHHHHTTTTSCCCEEEEEEEECTTSCEEEEEECTTSCEEEESEEEEETTHHHHHHHHHHHTTCC
T ss_pred CchhHHHHHHHHHHHHHHHHhhhcccccceEEEecCCCcEEEecCCcceeeecCeeeecCccHHHHHHHHHhhccc
Confidence 9999999999999999887778999999999999999999999999999999999999999999999999988754
No 24
>d1iruf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1e-37 Score=242.68 Aligned_cols=150 Identities=16% Similarity=0.219 Sum_probs=139.6
Q ss_pred ccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCH
Q 030879 12 DNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSC 91 (170)
Q Consensus 12 ~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~ 91 (170)
+++|+|+|||+++||||||+|++.+++.. .+.+||++|++++++++||+.+|++.+.++++.++..|+..+++++++
T Consensus 26 v~~G~t~vgik~~dgVvlaad~~~~~~~~---~~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~i~~ 102 (238)
T d1iruf_ 26 VKQGSATVGLKSKTHAVLVALKRAQSELA---AHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPV 102 (238)
T ss_dssp HHHSCCEEEEECSSEEEEEEECCCSSTTB---CCCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCH
T ss_pred HhcCCCEEEEEeCCEEEEEEecccccCCC---CccceEEEeCCceEEEEeccchHHHHHHHHHHHHHHHHHHHcCCCcch
Confidence 56899999999999999999999998743 456899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH--Hhhc--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCCC
Q 030879 92 PAMGQLLSNTL--YYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 92 ~~la~~l~~~~--~~~r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
+.+++.++++. |+++ .|||++++||||||++| |+||++||+|++.+++++|+|+|++.++++||+.|+++|+.
T Consensus 103 ~~l~~~l~~~~~~y~~~~~~rP~~v~~il~G~D~~g-p~Ly~~D~~G~~~~~~~~a~G~g~~~~~~~Lek~~~~~~~~ 179 (238)
T d1iruf_ 103 SRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMG-PHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMEC 179 (238)
T ss_dssp HHHHHHHHHHHHHHHHBTTCCCCCEEEEEEEEETTE-EEEEEECSSSCEEEESEEEESTTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhccCCCcccceEEEEEEcCCC-ceEEEEcCCCCEEeeeeEEECCCchhhHHHHHhhcccccCC
Confidence 99999999986 5555 48999999999999755 99999999999999999999999999999999999998864
No 25
>d1ryp2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.7e-37 Score=237.91 Aligned_cols=154 Identities=17% Similarity=0.262 Sum_probs=143.9
Q ss_pred ccccccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhc--
Q 030879 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQH-- 85 (170)
Q Consensus 8 ~~~~~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~-- 85 (170)
++|+. +|+|+|||+++||||||+|+|.+.+.++..++.+|||+|+++++++++|+.+|++.+.+.++.++..|++++
T Consensus 2 ~~~i~-tGtTivgi~~~dgVvlaaD~r~s~g~~~~~~~~~KI~~i~~~i~~~~sG~~~D~~~l~~~l~~~~~~~~~~~~~ 80 (233)
T d1ryp2_ 2 QQPIV-TGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLLKDLVTENAYDNPL 80 (233)
T ss_dssp CCCCE-EECCEEEEEETTEEEEEEECCEEETTEEEESCCCCEEEETTTEEEEEEEEHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred CCCcc-ccceEEEEEECCEEEEEECCCcccCCeeecCCcceEEEeCCCEEEEeccCchHHHHHHHHHHHHHHHHHHhhCC
Confidence 45555 799999999999999999999998889999999999999999999999999999999999999999998766
Q ss_pred ---CCCCCHHHHHHHHHHHHHhhc--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCC
Q 030879 86 ---NKQMSCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 160 (170)
Q Consensus 86 ---~~~~~~~~la~~l~~~~~~~r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~ 160 (170)
++.++++.+++++++.+|+++ .+||++++||+|+|++++|+||.+||+|.+.+.+++|+|+|+++++++||+.|+
T Consensus 81 ~~~~~~~~~~~~a~~l~~~~y~~~~~~~P~~~~~liaG~d~~g~~~ly~~d~~G~~~~~~~~a~G~g~~~a~~~Le~~~~ 160 (233)
T d1ryp2_ 81 ADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVD 160 (233)
T ss_dssp TTTTTSCCHHHHHHHHHHHHHHHHHTTCCCCEEEEEEEECTTSCEEEEEEETTCCEECCSEEECTHHHHHHHHHHTTTCC
T ss_pred CCCCcccCHHHHHHHHHHHHHhhccccCCceeEEEEEEEcCCCCeEEEEEcCCCcEEeeeeEEecCccHHHHHHHHHHHh
Confidence 577899999999999998764 789999999999999999999999999999999999999999999999999998
Q ss_pred CC
Q 030879 161 SP 162 (170)
Q Consensus 161 ~~ 162 (170)
++
T Consensus 161 ~~ 162 (233)
T d1ryp2_ 161 RE 162 (233)
T ss_dssp SG
T ss_pred hc
Confidence 53
No 26
>d1rypi_ d.153.1.4 (I:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.4e-36 Score=233.99 Aligned_cols=148 Identities=23% Similarity=0.275 Sum_probs=141.0
Q ss_pred CeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 030879 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 95 (170)
Q Consensus 16 ~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~la 95 (170)
||+|||+++||||||+|+|.+.+.++.+++.+||++|+++++|+++|+.+|++.+.++++.+++.|+..++.++++..++
T Consensus 1 TTiVgik~~dGVviaaD~r~s~g~~~~~~~~~KI~~I~~~i~~~~sG~~aD~~~l~~~l~~~~~~~~~~~~~~~~v~~~a 80 (222)
T d1rypi_ 1 TTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSAL 80 (222)
T ss_dssp CCEEEEEETTEEEEEECCCEEETTEEEESSCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred CeEEEEEECCEEEEEECCCcccCceeecCCcccEEEEcCCEEEEecccchHHHHHHHHHHHHHHHhhhhhCCCCcHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCCC
Q 030879 96 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 96 ~~l~~~~~~~r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
+.++..+|..+ +|+++++|+||+|++ +|+||.+||+|++.+++++|+|+|+++++++||+.|+++|..
T Consensus 81 ~~l~~~~~~~~-~p~~~~~l~aG~d~~-g~~Ly~id~~G~~~~~~~~a~Gsg~~~a~~~Le~~~k~~ms~ 148 (222)
T d1rypi_ 81 QMLKQHLFKYQ-GHIGAYLIVAGVDPT-GSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTK 148 (222)
T ss_dssp HHHHHHHHHTT-TCSCEEEEEEEEETT-EEEEEEECTTSCEEECSEEEESTTHHHHHHHHHHHCCSSCCH
T ss_pred HHHHHHHHhhh-hccceeEEEEEEcCC-CcEEEEEecCcceEEeeEEEECCCcHHHHHHHHhhccCCCCH
Confidence 99999887654 799999999999975 599999999999999999999999999999999999998754
No 27
>d1rypg_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=9.8e-37 Score=237.93 Aligned_cols=153 Identities=18% Similarity=0.205 Sum_probs=140.2
Q ss_pred ccccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCC
Q 030879 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM 89 (170)
Q Consensus 10 ~~~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~ 89 (170)
.++++|+|+|||+++||||||+|++.+++..+ .+..+||++|+++++++++|+.+|++.+.++++.+++.|++.+++++
T Consensus 25 kav~~G~t~igik~~dgVvlaad~~~~~~~~~-~~~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~ 103 (244)
T d1rypg_ 25 KAVENGTTSIGIKCNDGVVFAVEKLITSKLLV-PQKNVKIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPI 103 (244)
T ss_dssp HHHHTSCCEEEEEETTEEEEEEEEECCCTTBC-TTTSCCCEEETTTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHcCCCEEEEEeCCEEEEEEecccCCCCcc-ccccceEEEccCceEEEEccchhhHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34678999999999999999999999988554 56678999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHh--hc--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhc---cCCCC
Q 030879 90 SCPAMGQLLSNTLYY--KR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN---QLKSP 162 (170)
Q Consensus 90 ~~~~la~~l~~~~~~--~r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~---~~~~~ 162 (170)
+++.+++.++..++. ++ .|||++++|+||||++ +|+||.+||+|++.+++++|+|+|+..++++||+ .|+++
T Consensus 104 ~~~~la~~~~~~~~~~t~~~~~RP~~~~~iiaG~D~~-gp~Ly~idp~Gs~~~~~~~a~G~gs~~~~~~Lek~~~~~~~~ 182 (244)
T d1rypg_ 104 PIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKN-GAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEG 182 (244)
T ss_dssp CHHHHHHHHHHHHHHTTSCTTBCCCCEEEEEEEEETT-EEEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHHhhcccccCCceEEEEEEEEeCC-CCEEEEEcCCccEEecCeEecCCccHHHHHHHHHHHhhCCCC
Confidence 999999999999843 32 4899999999999976 4999999999999999999999999999999996 68887
Q ss_pred CC
Q 030879 163 SP 164 (170)
Q Consensus 163 ~~ 164 (170)
+.
T Consensus 183 mt 184 (244)
T d1rypg_ 183 LS 184 (244)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 28
>d1j2pa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=100.00 E-value=2.2e-36 Score=235.77 Aligned_cols=150 Identities=16% Similarity=0.239 Sum_probs=139.6
Q ss_pred ccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCH
Q 030879 12 DNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSC 91 (170)
Q Consensus 12 ~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~ 91 (170)
+++|+|+|||+++||||||+|++.+++.+ ..++.+|||+|+++++|++||+.+|++.+.++++.++..|+..+++++++
T Consensus 28 v~~G~t~Igik~~dgVvlaad~r~~~~~~-~~~~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~ 106 (243)
T d1j2pa_ 28 VKRGATAIGIKCKEGVILIADKRVGSKLL-EKDTIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDIPITV 106 (243)
T ss_dssp HHTSCCEEEEEETTEEEEEEECCCSCTTB-CGGGCCSEEECSSSEEEEEEECHHHHHHHHHHHHHHHHHHHHHSSSCCCH
T ss_pred HHcCCCEEEEEECCEEEEEEecCccccCc-cccccccEeecCCcEEEEeeecccHHHHHHHHHHHHHHHHHHhhCCCCcH
Confidence 46899999999999999999999998854 45778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh--hc--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCC
Q 030879 92 PAMGQLLSNTLYY--KR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 164 (170)
Q Consensus 92 ~~la~~l~~~~~~--~r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~ 164 (170)
+.+++.++..++. ++ .|||++++|+||+|+ +|+||.+||+|++.+++++|+|+|+++++++||+.|++++.
T Consensus 107 ~~l~~~l~~~~~~~~~~~~~rP~~~~~il~G~D~--~p~Ly~~Dp~G~~~~~~~~a~G~g~~~a~~~Le~~y~~~ms 181 (243)
T d1j2pa_ 107 KELAKKICDFKQQYTQYGGVRPFGVSLLIAGVNE--VPKLYETDPSGALLEYKATAIGMGRMAVTEFFEKEYRDDLS 181 (243)
T ss_dssp HHHHHHHHHHHHHTTSBTTBCCCCEEEEEEEESS--SEEEEEECTTCCEEEBSEEEESTTHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHHHHHHHhhhccCCccceeEEEEEecC--CceEEEEeccCceeeeeEEEeCCCcHHHHHHHHhhcccCCC
Confidence 9999999999854 22 579999999999984 39999999999999999999999999999999999999875
No 29
>d1rypf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.1e-36 Score=236.06 Aligned_cols=147 Identities=19% Similarity=0.236 Sum_probs=135.9
Q ss_pred cccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCC
Q 030879 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMS 90 (170)
Q Consensus 11 ~~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~ 90 (170)
++++|+|+|||+++||||||+|++.+++. .+..+||++|+++++|++||+.+|++.+.++++.+++.|+..++++++
T Consensus 27 av~~g~t~igi~~~dgvvlaad~~~~~~l---~~~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~r~~~~~~~~~~~~~i~ 103 (233)
T d1rypf_ 27 AIKQGSVTVGLRSNTHAVLVALKRNADEL---SSYQKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLA 103 (233)
T ss_dssp HHHTSCCEEEEECSSEEEEEEECCCSSTT---BCCCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHcCCCEEEEEECCeEEEEEeccccccC---CcchheEEEcCCCEEEEEeeccccHHHHHHHHHHHHHhhhhhcCCCCc
Confidence 45789999999999999999999998763 467799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH--hhc--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCC
Q 030879 91 CPAMGQLLSNTLY--YKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 161 (170)
Q Consensus 91 ~~~la~~l~~~~~--~~r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~ 161 (170)
++.+|+.++++++ ++. .|||++++||+|+|++| |+||++||+|++.+++++|+|+|++.++++||+.|++
T Consensus 104 ~~~la~~l~~~~~~~t~~~~~RP~gv~~il~G~d~~g-~~Ly~idp~G~~~~~~~~aiG~gs~~a~~~Le~~~~~ 177 (233)
T d1rypf_ 104 VERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKSG-AHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDT 177 (233)
T ss_dssp HHHHHHHHHHHHHHHHHBTTCCCCCEEEEEEEEETTE-EEEEEECTTSCEEEESEEEESTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccccCCccceEEEEEEcCCC-CEEEEEccccceecccEEEecCchHHHHHHHHHHHhh
Confidence 9999999999994 433 58999999999999776 9999999999999999999999999999999987644
No 30
>d1iru2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.8e-35 Score=226.77 Aligned_cols=153 Identities=23% Similarity=0.310 Sum_probs=141.5
Q ss_pred CccccccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHH-hc
Q 030879 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQH-QH 85 (170)
Q Consensus 7 ~~~~~~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~-~~ 85 (170)
+++|+. +|+|+|||+++||||||+|+|.+.+.++..++.+||++|+++++++++|..+|++.+.+.++.++..++. .+
T Consensus 1 ~~~~~~-~GtTivgi~~~dgVviaaD~r~t~g~~~~~~~~~KI~~i~~~i~~~~sG~~aD~~~l~~~~~~~~~~~~~~~~ 79 (217)
T d1iru2_ 1 TQNPMV-TGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGD 79 (217)
T ss_dssp CCSCCS-EECCCEEEEETTEEEEEEECCEEETTEEEECSCCCEEEETTTEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred CCCCcC-cccEEEEEEECCEEEEEEcCCcccCCeeecCCcceEEEeCCCeEEEeccccHHHHHHHHHHHHHHHHhhhhcC
Confidence 356766 8999999999999999999999999999999999999999999999999999999999999999987765 56
Q ss_pred CCCCCHHHHHHHHHHHHHhhc--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCC
Q 030879 86 NKQMSCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 161 (170)
Q Consensus 86 ~~~~~~~~la~~l~~~~~~~r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~ 161 (170)
+.+++++.+++++++.+|+++ .+|+++++|++|+|. ++|+||.+||+|++.+.+++|+|+|++++++.||+.|+.
T Consensus 80 ~~~~~v~~~a~~l~~~~y~~~~~~~p~~~~~li~G~d~-~~~~l~~~D~~G~~~~~~~~a~G~g~~~a~~~Le~~~~~ 156 (217)
T d1iru2_ 80 GHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYAD-GESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEK 156 (217)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHTTCCCCEEEEEEEEET-TEEEEEEECSSCCEEECSEEECTTHHHHTHHHHHHHHTS
T ss_pred CCCCCHHHHHHHHHHHHHHhccccCcccceEEEEEEcC-CCcEEEEEecCceeEeeeEEeccCcHHHHHHHHHHHhcc
Confidence 799999999999999998876 689999999999995 569999999999999999999999999999999997763
No 31
>d1irub_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=4.3e-35 Score=226.62 Aligned_cols=152 Identities=15% Similarity=0.167 Sum_probs=141.1
Q ss_pred ccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCH
Q 030879 12 DNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSC 91 (170)
Q Consensus 12 ~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~ 91 (170)
+++|+|+|||+++||||||+|++.+++. +..++.+|||+|+++++|+++|+.+|++.+.++++.+++.|+..+++++++
T Consensus 28 v~~G~tvigik~~dgVvlaaD~r~~~~~-~~~~~~~ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~ 106 (233)
T d1irub_ 28 VAGGAPSVGIKAANGVVLATEKKQKSIL-YDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPT 106 (233)
T ss_dssp HHTSCCEEEEECSSCEEEEEECCCCCSS-BCSTTCCSSEESSSSEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCH
T ss_pred HHcCCCEEEEEeCCEEEEEEeCCcccCC-ccccccceEEEecCceEEEEeccchHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 3589999999999999999999999885 457889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh----cCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCCC
Q 030879 92 PAMGQLLSNTLYYK----RFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 92 ~~la~~l~~~~~~~----r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
+.+++.++.+++.. +.||++++++++|+|++ +|+||.+||+|++.+++++|+|+|+++++++||+.|++++..
T Consensus 107 ~~~~~~l~~~~~~~~~~~~~~p~~~~~li~g~d~~-~~~ly~id~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~ms~ 183 (233)
T d1irub_ 107 AQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEG-RPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLEL 183 (233)
T ss_dssp HHHHHHHHHHHHHTTTSBTBCCCSEEEEEEEECSS-SEEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHCCTTCCH
T ss_pred HHHHHHHHHHHHHHhhccccccceEEEeeeecccC-CceEEEEcCCcceEeccceecCCcHHHHHHHHHhhcccCccH
Confidence 99999999998532 25899999999999854 599999999999999999999999999999999999998764
No 32
>d1iruk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.8e-34 Score=216.33 Aligned_cols=150 Identities=19% Similarity=0.307 Sum_probs=143.1
Q ss_pred CCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCHHHH
Q 030879 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 94 (170)
Q Consensus 15 g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~l 94 (170)
|||||||+++||||||+|+|.+.|.++.+++.+|||+|+++++++++|..+|++.+.++++.+++.|+..++.+++++.+
T Consensus 1 Mt~ivgi~~kdgVviaaD~r~~~g~~~~~~~~~Ki~~i~~~i~~~~~G~~aD~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 80 (199)
T d1iruk_ 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAA 80 (199)
T ss_dssp CCCEEEEECSSEEEEEEECCEEETTEEEESSCCCEEECSSSEEEEEEESTTHHHHHHHHHHHHHHHHHHHHSSCCCHHHH
T ss_pred CeEEEEEEECCEEEEEECCCccCCCeeecCCcceEEEecCcEEEEecccchHHHHHHHHHHHHhhhhhhhcCCcCcHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc--CCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCC
Q 030879 95 GQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 164 (170)
Q Consensus 95 a~~l~~~~~~~r--~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~ 164 (170)
++.++..++..+ .+|++++++++|+|++++|+||.+||+|.+.+.+++++|+|+++++++||+.|++++.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~aG~d~~~~~~l~~~~~~g~~~~~~~~a~G~gs~~a~~~l~~~~~~~~~ 152 (199)
T d1iruk_ 81 ANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTIS 152 (199)
T ss_dssp HHHHHHHHHHHHTSSSCCCEEEEEEEEETTTEEEEEEECTTCCEEECSEEEESHHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHHHHhhccCCcceeeeecceeccCCceEEeecccceEEeeeeeeecccchhhhHHHHHhccCCCC
Confidence 999999886543 5799999999999998889999999999999999999999999999999999999875
No 33
>d1q5qa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Rhodococcus erythropolis [TaxId: 1833]}
Probab=100.00 E-value=2.6e-34 Score=221.99 Aligned_cols=147 Identities=14% Similarity=0.135 Sum_probs=130.9
Q ss_pred cccCCCeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcC-CCC
Q 030879 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQM 89 (170)
Q Consensus 11 ~~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~-~~~ 89 (170)
++++|+|+|||+++||||||+|+|.+ ..+||++|+++|+|++||+.+|++.+.++++.+++.|++.++ .++
T Consensus 15 av~~GtT~vgi~~~~GVvlaad~r~~--------s~~KI~~i~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~~~ 86 (227)
T d1q5qa_ 15 GIARGRSVVVLTFRDGVLFVAENPST--------ALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDV 86 (227)
T ss_dssp HHHTSCCEEEEECSSEEEEEECCSCS--------SSCSEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHSCGGGC
T ss_pred HHhcCCCEEEEEECCEEEEEEccCCC--------CcceEEEecCceEEEecCchHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 46789999999999999999999965 358999999999999999999999999999999999999988 568
Q ss_pred CHHHHHHHHHHHH---HhhcCCCeeEEEEEEEEcCC---CCeEEEEECCCCceeeeC-eEEEccChhhhHHHHhccCCCC
Q 030879 90 SCPAMGQLLSNTL---YYKRFFPYYSFNVLGGLDNE---GKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSP 162 (170)
Q Consensus 90 ~~~~la~~l~~~~---~~~r~~P~~v~~lv~G~d~~---g~p~L~~id~~G~~~~~~-~~aiG~g~~~~~~~Le~~~~~~ 162 (170)
+++.+++.+++++ +..+.|||++++||||||.. .+|+||++||+|++.+++ +++.|++++.++++||+.|+++
T Consensus 87 ~~~~la~~~~~~~~~~~~~~~rP~gvs~lvaG~D~~g~~~~p~Ly~vDpsG~~~~~~~~~~~g~~s~~~~~~Le~~y~~~ 166 (227)
T d1q5qa_ 87 TGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRAD 166 (227)
T ss_dssp CHHHHHHHHHHHHHHHHHHSSSCCCEEEEEEECCCSSCCCCCEEEEEETTSCEEEESSEEEESSSHHHHHHHHHHHCCTT
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCceEEEEEEEEecCCCCCCCEEEEEccccceeeecccccCCCchHHHHHHHHHhccCC
Confidence 9999999998875 44457899999999999863 469999999999988766 6777888999999999999998
Q ss_pred CCC
Q 030879 163 SPL 165 (170)
Q Consensus 163 ~~~ 165 (170)
|..
T Consensus 167 ms~ 169 (227)
T d1q5qa_ 167 LDL 169 (227)
T ss_dssp CCH
T ss_pred CCH
Confidence 854
No 34
>d1q5qh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Rhodococcus erythropolis [TaxId: 1833]}
Probab=100.00 E-value=2.3e-33 Score=215.36 Aligned_cols=150 Identities=23% Similarity=0.244 Sum_probs=138.3
Q ss_pred CeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 030879 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 95 (170)
Q Consensus 16 ~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~la 95 (170)
||+|||+++||||||+|++.+++.++..++.+||++|+++++++++|..+|++.+.++++.+++.|+..++.+++++.++
T Consensus 1 TTivgi~~kdgVvlaaD~r~s~g~~i~~~~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T d1q5qh_ 1 TTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKA 80 (224)
T ss_dssp CCEEEEECSSCEEEEECCCEEETTEEEESCCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHH
T ss_pred CeEEEEEECCEEEEEECCCcccCCEeecCCcceEEEeCCcEEEEecccchHHHHHHHHHHHHhHHHHHhhCCCccHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhc---CCCeeEEEEEEEEc-----CCCCeEEEEECCCCceeee--CeEEEccChhhhHHHHhccCCCCCCC
Q 030879 96 QLLSNTLYYKR---FFPYYSFNVLGGLD-----NEGKGCVYTYDAVGSYERV--GYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 96 ~~l~~~~~~~r---~~P~~v~~lv~G~d-----~~g~p~L~~id~~G~~~~~--~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
+.+++.+|..+ .+|+++.++++|++ .+++|+||++|++|+..++ ++.|+|+|+.+++++||+.|+++|..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~d~~~~~~l~~~d~~G~~~~~~~~~~a~GsG~~~a~~~Le~~~~~~mt~ 160 (224)
T d1q5qh_ 81 NRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDE 160 (224)
T ss_dssp HHHHHHHHTTHHHHTTTCCEEEEEEEECTTCSSTTSCEEEEEECTTSCEEECCSSEEEESTTHHHHHHHHHHHCCTTCCH
T ss_pred HHHHHHHHHhhcccccCccceeeEEEeecccccccCCceEEEEEccCcEEEeccceeeecCccHHHHHHHHHhhcccCCH
Confidence 99999996432 57888888888875 4567999999999998654 78999999999999999999998753
No 35
>d1m4ya_ d.153.1.4 (A:) HslV (ClpQ) protease {Thermotoga maritima [TaxId: 2336]}
Probab=99.87 E-value=1.2e-22 Score=148.94 Aligned_cols=139 Identities=14% Similarity=0.018 Sum_probs=104.5
Q ss_pred CeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCceEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 030879 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 95 (170)
Q Consensus 16 ~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~la 95 (170)
||+|||+++||||||+|+|.+.|.++.+++.+||++|+++++++.+|..+|.+.+.+.+..+...+... ......
T Consensus 1 TTivav~~~~gVviAaDtR~S~G~~i~~r~~~Ki~~i~~~~~~~~~g~~ad~~~~~~~~~~~~~~~~~~-----~~~~~~ 75 (171)
T d1m4ya_ 1 TTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMTLFDRFEAKLREWGG-----NLTKAA 75 (171)
T ss_dssp CCEEEEEETTEEEEEECCCEEETTEEEESCCCCEEEETTTTEEEEEESCHHHHHHHHHHHHHHHHHTTT-----CHHHHH
T ss_pred CeEEEEEECCEEEEEECCCcccCCEEEeCCcceEEEecCCcEEEEEeechhhHHHHHHHHHHHHHHhhc-----cchhhH
Confidence 799999999999999999999999999999999999999999999999999998887776665444322 112122
Q ss_pred HHHHHHHHhhcCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCC
Q 030879 96 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 161 (170)
Q Consensus 96 ~~l~~~~~~~r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~ 161 (170)
......+...+ .++....++.+.+ +++|+++..|+.|...+.++.|+|||+.+|++.|+..+++
T Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~l~~~~~~ 139 (171)
T d1m4ya_ 76 VELAKDWRTDR-VLRRLEALLLVAD-KENIFIISGNGEVIQPDDDAAAIGSGGPYALAAAKALLRN 139 (171)
T ss_dssp HHHHHHHHHCT-TGGGCCCEEEEEC-SSCEEEECTTSCEECCSSSEEEESTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-hhcccccccceec-CCcceEEecCCceeeecCCEEEEcchHHHHHHHHHhhccC
Confidence 22222221111 1111122233344 4569999999999999999999999999999999987653
No 36
>d2z3ba1 d.153.1.4 (A:1-180) HslV (ClpQ) protease {Bacillus subtilis [TaxId: 1423]}
Probab=99.85 E-value=1.4e-22 Score=149.96 Aligned_cols=142 Identities=15% Similarity=0.044 Sum_probs=100.3
Q ss_pred ccCCCeEEEEEcCCEEEEeEeCccccCceeeec-CcCceEEecCc-eEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCC
Q 030879 12 DNNGGTCVAIAGADYCVTAADTRMSTGYSILSR-DYSKIIKLADK-CVMASSGFQADVKALQKLLAARHLIYQHQHNKQM 89 (170)
Q Consensus 12 ~~~g~tvvgik~~dgVvlaad~~~~~~~~i~~~-~~~Ki~~i~~~-i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~ 89 (170)
..+|||+|||+++||||||+|+|.++|.++..+ ..+|+++++++ ++++.+|...|.+.+.+.++.+.+.++....
T Consensus 2 ~~~GTTivai~~~dGVvlAaDtR~S~G~~i~~~~~~~ki~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--- 78 (180)
T d2z3ba1 2 SFHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTLFEKFEAKLEEYNGNLK--- 78 (180)
T ss_dssp CBCCCCEEEEEETTEEEEEECCCEEETTTEEEESCCCCEEEETTTTEEEEECSCHHHHHHHHHHHHHHHHHTTTCHH---
T ss_pred CCCCeEEEEEEECCEEEEEECCcccCCceeEecccceEEEEecccceecccchHHHHHHHHHHHHHHHHHhhccccc---
Confidence 357999999999999999999999999777665 57889999775 8888899999999999988877765543221
Q ss_pred CHHHHHHHHHHHH----HhhcCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCCCCCC
Q 030879 90 SCPAMGQLLSNTL----YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 165 (170)
Q Consensus 90 ~~~~la~~l~~~~----~~~r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~~~~~ 165 (170)
..+........ +..+..++......+ +.++..+..+.....++.++|+|+.+|++.||+.|++++..
T Consensus 79 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~a~GSGs~~A~g~l~~~~~~~~s~ 149 (180)
T d2z3ba1 79 --RAAVELAKEWRSDKVLRKLEAMLIVMNQDT-------LLLVSGTGEVIEPDDGILAIGSGGNYALAAGRALKKHAGES 149 (180)
T ss_dssp --HHHHHHHHHHHHCTTGGGCCCCEEEECSSC-------EEEECTTCCEECCSSSEEEESTTHHHHHHHHHHHHHHHGGG
T ss_pred --hhHHHHHHHHhHHHHHHHhhcceeeeeccc-------cccccCCceeecccccEEEEcCchHHHHHHHHHHhhcCCCc
Confidence 11222221111 222222333332223 44555555555555669999999999999999999987654
No 37
>d1g3ka_ d.153.1.4 (A:) HslV (ClpQ) protease {Haemophilus influenzae [TaxId: 727]}
Probab=99.84 E-value=8.2e-21 Score=139.26 Aligned_cols=139 Identities=15% Similarity=0.099 Sum_probs=101.5
Q ss_pred CeEEEEEcCCEEEEeEeCccccCceeeecCcCceEEecCc-eEEeecCChhHHHHHHHHHHHHHHHHHHhcCCCCCHHHH
Q 030879 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADK-CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 94 (170)
Q Consensus 16 ~tvvgik~~dgVvlaad~~~~~~~~i~~~~~~Ki~~i~~~-i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~l 94 (170)
||+|||+++||||||+|+|.+.|.++.+++.+||++|+++ ++++.+|...+.+.+.+..+.....+ + ......
T Consensus 1 TTivai~~~dGVVlAaDtRaS~G~~i~~r~~~Ki~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~ 74 (173)
T d1g3ka_ 1 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELFERKLEMH-----Q-GHLLKS 74 (173)
T ss_dssp CCEEEEEETTEEEEEECCCEEETTEEEESCCCCEEEETTTTEEEEEESCHHHHHHHHHHHHHHHHHT-----T-TCHHHH
T ss_pred CeEEEEEECCEEEEEECCCcccCCEeEcCCcceEEEecCCcEEEEeeehhHhHHHHHHHHHHHHHhh-----c-CcchhH
Confidence 7999999999999999999999999999999999999887 55566666666665555443332222 2 233334
Q ss_pred HHHHHHHHHhhcCCCeeEEEEEEEEcCCCCeEEEEECCCCceeeeCeEEEccChhhhHHHHhccCCC
Q 030879 95 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 161 (170)
Q Consensus 95 a~~l~~~~~~~r~~P~~v~~lv~G~d~~g~p~L~~id~~G~~~~~~~~aiG~g~~~~~~~Le~~~~~ 161 (170)
+..+...++..+..+.....+ .+.+.++++.++..++.|...+.++.|+|||+.+|++.|+..++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~GSGs~~A~~~l~~~~~~ 140 (173)
T d1g3ka_ 75 AVELAKDWRTDRALRKLEAML-IVADEKESLIITGIGDVVQPEEDQILAIGSGGNYALSAARALVEN 140 (173)
T ss_dssp HHHHHHHHHHSTTGGGCCCEE-EEECSSCEEEEETTTEEECCCTTCEEEESTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhccccccc-ccccCCCcceecccCceEEecCCCEEEecchHHHHHHHHHHhhhc
Confidence 444444443333222333333 455667779999999999999999999999999999999988753
No 38
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=64.30 E-value=6.6 Score=21.38 Aligned_cols=33 Identities=6% Similarity=0.108 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 030879 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 99 (170)
Q Consensus 67 ~~~l~~~~~~~~~~~~~~~~~~~~~~~la~~l~ 99 (170)
.+.+..+++.....+....|+.++++.+|..+.
T Consensus 10 ~~e~~~ki~~~~~~l~q~lgRePT~~EiA~~l~ 42 (57)
T d1l0oc_ 10 LKEMGNKIRKAKDELSKTRGRAPTVTEIADHLG 42 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCBHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHC
Confidence 345566677677777888999999999998763
No 39
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=58.00 E-value=9.8 Score=21.73 Aligned_cols=33 Identities=6% Similarity=0.069 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 030879 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 99 (170)
Q Consensus 67 ~~~l~~~~~~~~~~~~~~~~~~~~~~~la~~l~ 99 (170)
++...+.++.....+....|+.++.+.+|+.+.
T Consensus 5 ~r~~~~ki~~a~~~L~~~lGR~Pt~~EiA~~lg 37 (77)
T d1rp3a1 5 VREKERRIKEVVEKLKEKLGREPTDEEVAKELG 37 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCHHHHHHHHC
Confidence 345556666667777788999999999998773
No 40
>d1u94a2 d.48.1.1 (A:269-328) RecA protein, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=36.91 E-value=15 Score=20.33 Aligned_cols=28 Identities=14% Similarity=0.277 Sum_probs=25.1
Q ss_pred ECCCCceeeeCeEEEccChhhhHHHHhc
Q 030879 130 YDAVGSYERVGYSSQGSGSTLIMPFLDN 157 (170)
Q Consensus 130 id~~G~~~~~~~~aiG~g~~~~~~~Le~ 157 (170)
|+-+|+.+.+.---+|-|.+.+..+|++
T Consensus 16 i~KsGsWysy~~eklGQGre~~~~~L~e 43 (60)
T d1u94a2 16 IEKAGAWYSYKGEKIGQGKANATAWLKD 43 (60)
T ss_dssp EECCTTCEEETTEEEESSHHHHHHHHHH
T ss_pred cccccceEEeCCccccchHHHHHHHHHH
Confidence 5678999999999999999999999975
No 41
>d1ku2a1 a.4.13.1 (A:273-332) Sigma factor SigA {Thermus aquaticus [TaxId: 271]}
Probab=34.17 E-value=33 Score=18.58 Aligned_cols=29 Identities=10% Similarity=0.100 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 030879 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLL 98 (170)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~~~~la~~l 98 (170)
.+++++..........|++++.+++|..+
T Consensus 10 ~i~rv~r~~~~l~qe~gRePt~eEiA~~l 38 (60)
T d1ku2a1 10 TINKLSRTARQLQQELGREPSYEEIAEAM 38 (60)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 34455555556666889999999999875
No 42
>d1mo6a2 d.48.1.1 (A:270-329) RecA protein, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.11 E-value=14 Score=20.41 Aligned_cols=28 Identities=18% Similarity=0.171 Sum_probs=24.4
Q ss_pred ECCCCceeeeCeEEEccChhhhHHHHhc
Q 030879 130 YDAVGSYERVGYSSQGSGSTLIMPFLDN 157 (170)
Q Consensus 130 id~~G~~~~~~~~aiG~g~~~~~~~Le~ 157 (170)
|+-+|+.+.++---+|-|.+.+..+|+.
T Consensus 16 i~KsGaWysy~~ekiGQGre~a~~~L~e 43 (60)
T d1mo6a2 16 IRKSGAWFTYEGEQLGQGKENARNFLVE 43 (60)
T ss_dssp SEESSSEEECSSSEEEESHHHHHHHHHH
T ss_pred hhccCceeEECCchHHhHHHHHHHHHHH
Confidence 4568999999888999999999999986
No 43
>d1xp8a2 d.48.1.1 (A:283-341) RecA protein, C-terminal domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=22.05 E-value=12 Score=20.71 Aligned_cols=28 Identities=18% Similarity=0.398 Sum_probs=24.1
Q ss_pred ECCCCceeeeCeEEEccChhhhHHHHhc
Q 030879 130 YDAVGSYERVGYSSQGSGSTLIMPFLDN 157 (170)
Q Consensus 130 id~~G~~~~~~~~aiG~g~~~~~~~Le~ 157 (170)
|+-+|+.+.++---+|-|.+.+..+|+.
T Consensus 15 i~KsGaWysy~~e~iGQGre~a~~~L~e 42 (59)
T d1xp8a2 15 IKKAGSFYSYGDERIGQGKEKTIAYIAE 42 (59)
T ss_dssp SEEETTEEESSSSEEEESHHHHHHHHTT
T ss_pred eecccceEEECCEehhhhHHHHHHHHHH
Confidence 4567899999888899999999999985
No 44
>d1rtya_ a.25.2.2 (A:) Putative ATP-binding cobalamin adenosyltransferase YvqK {Bacillus subtilis [TaxId: 1423]}
Probab=21.79 E-value=62 Score=21.09 Aligned_cols=53 Identities=9% Similarity=0.073 Sum_probs=31.6
Q ss_pred EecCceEEeecCChhH---HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Q 030879 51 KLADKCVMASSGFQAD---VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLY 103 (170)
Q Consensus 51 ~i~~~i~~~~sG~~~D---~~~l~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~ 103 (170)
++...|.-|.+-..+- ++++.+++++.+............+-.+.|.||+++|
T Consensus 85 ~l~~FILPGGs~~~A~lh~aRtv~RRaER~~v~l~~~~~v~~~~~~YlNRLSD~lF 140 (161)
T d1rtya_ 85 ELKKFILPGGSKCASLLHIARTITRRAERRVVALMKSEEIHETVLRYLNRLSDYFF 140 (161)
T ss_dssp CCCSCBCSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred cccceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence 4445555444443333 5677777777664444344444455678899999985
Done!