Query 030881
Match_columns 170
No_of_seqs 113 out of 1645
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 09:10:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030881.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030881hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p5q_A Glutathione peroxidase 100.0 1E-36 3.5E-41 211.2 17.3 170 1-170 1-170 (170)
2 3dwv_A Glutathione peroxidase- 100.0 7E-37 2.4E-41 215.9 14.9 165 5-169 19-184 (187)
3 2v1m_A Glutathione peroxidase; 100.0 2.7E-35 9.4E-40 203.8 17.8 164 5-169 4-168 (169)
4 2i3y_A Epididymal secretory gl 100.0 2.6E-35 8.8E-40 211.9 17.9 163 6-169 29-212 (215)
5 2f8a_A Glutathione peroxidase 100.0 5.4E-35 1.8E-39 209.5 17.6 164 6-169 20-208 (208)
6 2gs3_A PHGPX, GPX-4, phospholi 100.0 5.1E-35 1.7E-39 206.0 16.6 163 4-167 21-185 (185)
7 3kij_A Probable glutathione pe 100.0 6.9E-35 2.4E-39 204.4 17.0 160 5-168 11-170 (180)
8 2r37_A Glutathione peroxidase 100.0 1.8E-34 6.1E-39 206.5 17.5 161 7-168 12-193 (207)
9 2obi_A PHGPX, GPX-4, phospholi 100.0 1.4E-34 4.7E-39 203.3 16.1 163 4-167 19-183 (183)
10 2p31_A CL683, glutathione pero 100.0 2.8E-34 9.4E-39 201.6 16.9 161 4-168 21-181 (181)
11 2vup_A Glutathione peroxidase- 100.0 3.7E-34 1.3E-38 202.4 17.1 164 5-169 21-186 (190)
12 3cmi_A Peroxiredoxin HYR1; thi 100.0 1.9E-33 6.4E-38 195.5 14.8 161 8-170 8-170 (171)
13 3eyt_A Uncharacterized protein 100.0 2.1E-31 7.2E-36 182.4 13.3 149 7-169 1-153 (158)
14 4g2e_A Peroxiredoxin; redox pr 100.0 4E-32 1.4E-36 186.6 9.6 149 4-166 2-156 (157)
15 3lor_A Thiol-disulfide isomera 100.0 5.1E-31 1.7E-35 180.8 13.8 148 8-169 5-156 (160)
16 4hde_A SCO1/SENC family lipopr 100.0 2.3E-30 7.9E-35 180.0 15.5 156 6-168 6-170 (170)
17 3fw2_A Thiol-disulfide oxidore 100.0 4.6E-30 1.6E-34 174.6 14.6 142 4-169 3-149 (150)
18 3u5r_E Uncharacterized protein 100.0 1.9E-30 6.5E-35 187.1 12.5 149 4-169 30-188 (218)
19 4fo5_A Thioredoxin-like protei 100.0 3.1E-30 1.1E-34 174.1 11.5 137 4-165 5-142 (143)
20 3ewl_A Uncharacterized conserv 100.0 3.7E-30 1.3E-34 173.3 11.8 137 7-168 2-141 (142)
21 3lwa_A Secreted thiol-disulfid 100.0 4.9E-30 1.7E-34 179.9 12.8 144 6-169 31-182 (183)
22 4gqc_A Thiol peroxidase, perox 100.0 3.8E-32 1.3E-36 188.0 2.0 151 3-168 2-160 (164)
23 2f9s_A Thiol-disulfide oxidore 100.0 8E-30 2.7E-34 173.4 13.4 139 7-169 1-139 (151)
24 1xzo_A BSSCO, hypothetical pro 100.0 7.2E-30 2.5E-34 177.4 13.4 154 4-169 5-173 (174)
25 3gkn_A Bacterioferritin comigr 100.0 5.7E-30 1.9E-34 176.4 12.8 151 4-168 5-162 (163)
26 3drn_A Peroxiredoxin, bacterio 100.0 3.3E-30 1.1E-34 177.5 11.5 129 6-155 2-132 (161)
27 3eur_A Uncharacterized protein 100.0 1.8E-29 6.3E-34 170.1 13.0 135 5-164 4-141 (142)
28 3or5_A Thiol:disulfide interch 100.0 1.1E-28 3.7E-33 169.8 16.3 147 4-169 6-152 (165)
29 3fkf_A Thiol-disulfide oxidore 100.0 7E-29 2.4E-33 167.7 14.9 142 4-169 3-147 (148)
30 3hcz_A Possible thiol-disulfid 100.0 2.7E-29 9.2E-34 169.7 12.5 143 4-168 3-146 (148)
31 2l5o_A Putative thioredoxin; s 100.0 2.6E-29 9E-34 171.0 12.2 141 6-169 2-142 (153)
32 2cvb_A Probable thiol-disulfid 100.0 3.4E-29 1.2E-33 176.3 13.1 148 4-169 5-160 (188)
33 2ywi_A Hypothetical conserved 100.0 1.6E-29 5.3E-34 179.0 10.5 149 4-169 16-175 (196)
34 2lrn_A Thiol:disulfide interch 100.0 5.9E-29 2E-33 169.4 12.9 140 6-169 3-142 (152)
35 2ggt_A SCO1 protein homolog, m 100.0 3.2E-29 1.1E-33 172.4 11.2 151 11-169 2-162 (164)
36 3gl3_A Putative thiol:disulfid 100.0 1.9E-28 6.6E-33 166.5 14.7 138 6-168 3-142 (152)
37 3ixr_A Bacterioferritin comigr 100.0 3.9E-29 1.3E-33 175.1 11.1 150 4-167 19-177 (179)
38 1jfu_A Thiol:disulfide interch 100.0 1.7E-28 5.7E-33 172.4 13.3 146 5-169 33-181 (186)
39 2c0d_A Thioredoxin peroxidase 100.0 1.2E-28 4E-33 178.0 12.8 143 5-167 24-183 (221)
40 1we0_A Alkyl hydroperoxide red 100.0 2.9E-28 1E-32 171.5 14.2 144 6-168 1-157 (187)
41 3me7_A Putative uncharacterize 100.0 5.8E-28 2E-32 167.8 15.4 156 7-170 2-164 (170)
42 3kcm_A Thioredoxin family prot 100.0 1.4E-28 4.9E-33 167.5 12.1 140 6-168 2-143 (154)
43 3raz_A Thioredoxin-related pro 100.0 1.4E-28 4.8E-33 167.4 12.0 138 11-169 4-141 (151)
44 2lrt_A Uncharacterized protein 100.0 2.6E-28 9E-33 166.5 13.3 138 4-167 7-144 (152)
45 2rli_A SCO2 protein homolog, m 100.0 1.9E-28 6.7E-33 169.7 12.4 149 13-168 7-164 (171)
46 2bmx_A Alkyl hydroperoxidase C 100.0 3.3E-28 1.1E-32 172.4 13.6 144 5-168 3-170 (195)
47 2yzh_A Probable thiol peroxida 100.0 2.7E-28 9.2E-33 169.4 12.7 144 5-167 20-171 (171)
48 1uul_A Tryparedoxin peroxidase 100.0 1.6E-28 5.5E-33 175.0 11.7 148 1-167 1-164 (202)
49 1n8j_A AHPC, alkyl hydroperoxi 100.0 1.2E-28 4.2E-33 173.6 10.4 142 7-167 2-155 (186)
50 2b5x_A YKUV protein, TRXY; thi 100.0 3E-28 1E-32 164.5 11.9 145 6-170 1-147 (148)
51 1xvw_A Hypothetical protein RV 100.0 2.2E-28 7.7E-33 167.8 11.2 134 4-156 7-144 (160)
52 3kh7_A Thiol:disulfide interch 100.0 3.4E-28 1.2E-32 169.8 12.2 137 5-168 29-167 (176)
53 2lja_A Putative thiol-disulfid 100.0 1.4E-27 4.8E-32 162.3 14.5 140 6-168 3-143 (152)
54 1zof_A Alkyl hydroperoxide-red 100.0 4.9E-28 1.7E-32 171.9 11.9 137 6-167 1-160 (198)
55 3erw_A Sporulation thiol-disul 100.0 6.6E-28 2.3E-32 162.2 11.6 138 4-163 7-144 (145)
56 2pn8_A Peroxiredoxin-4; thiore 100.0 3.4E-28 1.2E-32 174.5 10.7 145 4-167 17-176 (211)
57 2b7k_A SCO1 protein; metalloch 100.0 6.1E-28 2.1E-32 171.8 11.7 156 6-168 13-179 (200)
58 2i81_A 2-Cys peroxiredoxin; st 100.0 4.3E-28 1.5E-32 174.2 10.7 144 4-167 19-179 (213)
59 1psq_A Probable thiol peroxida 100.0 7.9E-28 2.7E-32 165.9 11.3 140 5-165 15-162 (163)
60 1xvq_A Thiol peroxidase; thior 100.0 1.1E-27 3.9E-32 167.0 12.1 147 4-170 16-167 (175)
61 3ha9_A Uncharacterized thiored 100.0 8.2E-28 2.8E-32 165.7 10.8 141 6-168 11-164 (165)
62 1q98_A Thiol peroxidase, TPX; 99.9 1.1E-27 3.7E-32 165.6 11.3 142 5-164 16-162 (165)
63 1zye_A Thioredoxin-dependent p 99.9 2.2E-27 7.5E-32 171.3 13.3 145 4-167 25-184 (220)
64 3p7x_A Probable thiol peroxida 99.9 5.3E-28 1.8E-32 167.3 9.7 127 4-152 18-147 (166)
65 2hyx_A Protein DIPZ; thioredox 99.9 5.1E-28 1.7E-32 185.1 10.5 145 5-168 50-199 (352)
66 3ia1_A THIO-disulfide isomeras 99.9 7E-28 2.4E-32 164.2 9.9 143 4-169 3-145 (154)
67 3ztl_A Thioredoxin peroxidase; 99.9 6.2E-28 2.1E-32 174.4 10.0 133 5-156 39-182 (222)
68 3zrd_A Thiol peroxidase; oxido 99.9 1.2E-27 4.3E-32 170.2 11.3 144 4-166 50-199 (200)
69 1zzo_A RV1677; thioredoxin fol 99.9 3.1E-27 1E-31 157.2 12.5 135 8-169 1-136 (136)
70 2h01_A 2-Cys peroxiredoxin; th 99.9 1.7E-27 5.9E-32 168.3 11.7 141 7-167 1-158 (192)
71 2jsy_A Probable thiol peroxida 99.9 6.5E-28 2.2E-32 166.7 9.0 143 5-168 17-167 (167)
72 2k6v_A Putative cytochrome C o 99.9 2.2E-28 7.5E-33 169.4 6.6 153 6-167 10-172 (172)
73 2a4v_A Peroxiredoxin DOT5; yea 99.9 6.8E-28 2.3E-32 165.5 8.6 132 4-156 5-139 (159)
74 1lu4_A Soluble secreted antige 99.9 4.1E-27 1.4E-31 156.8 12.0 132 10-168 2-136 (136)
75 1qmv_A Human thioredoxin perox 99.9 2.7E-27 9.3E-32 168.0 11.8 145 4-167 3-162 (197)
76 3qpm_A Peroxiredoxin; oxidored 99.9 1.5E-27 5.1E-32 174.2 10.7 143 4-165 46-203 (240)
77 1tp9_A Peroxiredoxin, PRX D (t 99.9 1.9E-27 6.4E-32 164.0 8.6 133 6-153 4-146 (162)
78 4evm_A Thioredoxin family prot 99.9 1.9E-26 6.4E-31 153.4 12.8 136 11-166 1-137 (138)
79 3tjj_A Peroxiredoxin-4; thiore 99.9 5.3E-27 1.8E-31 172.5 10.6 143 4-165 60-217 (254)
80 3hdc_A Thioredoxin family prot 99.9 6E-27 2.1E-31 160.5 9.5 135 4-165 13-149 (158)
81 3uma_A Hypothetical peroxiredo 99.9 1.9E-27 6.5E-32 167.1 6.8 146 5-165 25-183 (184)
82 1prx_A HORF6; peroxiredoxin, h 99.9 1.2E-26 4.1E-31 167.8 11.0 150 5-167 4-168 (224)
83 2h30_A Thioredoxin, peptide me 99.9 6.5E-27 2.2E-31 160.8 8.8 139 9-168 17-156 (164)
84 2b1k_A Thiol:disulfide interch 99.9 1.5E-26 5.2E-31 159.8 10.5 137 5-168 21-160 (168)
85 3mng_A Peroxiredoxin-5, mitoch 99.9 1E-26 3.4E-31 161.9 9.5 146 4-165 13-172 (173)
86 2ls5_A Uncharacterized protein 99.9 1.5E-28 5E-33 168.6 0.0 141 4-167 5-147 (159)
87 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 1E-26 3.5E-31 161.1 8.9 132 6-153 3-142 (167)
88 1kng_A Thiol:disulfide interch 99.9 1.6E-26 5.6E-31 157.5 9.2 139 4-168 6-152 (156)
89 2v2g_A Peroxiredoxin 6; oxidor 99.9 2E-26 6.7E-31 167.4 9.9 149 6-167 3-164 (233)
90 3keb_A Probable thiol peroxida 99.9 2E-25 6.9E-30 160.3 13.5 143 4-167 20-175 (224)
91 1xcc_A 1-Cys peroxiredoxin; un 99.9 3E-26 1E-30 165.3 8.7 149 6-167 3-165 (220)
92 3tue_A Tryparedoxin peroxidase 99.9 8.6E-26 2.9E-30 161.5 10.1 146 3-166 23-183 (219)
93 3sbc_A Peroxiredoxin TSA1; alp 99.9 1.5E-25 5.2E-30 159.9 9.9 143 6-166 23-179 (216)
94 2pwj_A Mitochondrial peroxired 99.9 1E-25 3.6E-30 156.6 8.4 133 7-154 8-155 (171)
95 1nm3_A Protein HI0572; hybrid, 99.9 1.2E-25 4.2E-30 164.1 9.1 135 6-155 3-145 (241)
96 3a2v_A Probable peroxiredoxin; 99.9 1.4E-25 4.7E-30 164.1 8.7 145 5-167 4-161 (249)
97 1i5g_A Tryparedoxin II; electr 99.9 1.2E-24 4.2E-29 146.6 6.5 121 7-150 2-126 (144)
98 4eo3_A Bacterioferritin comigr 99.9 6.5E-24 2.2E-28 160.9 10.3 133 10-167 2-138 (322)
99 3s9f_A Tryparedoxin; thioredox 99.9 6.6E-25 2.2E-29 151.6 3.3 123 4-150 20-146 (165)
100 1o8x_A Tryparedoxin, TRYX, TXN 99.9 2.4E-24 8.1E-29 145.6 5.9 120 7-150 3-126 (146)
101 2lus_A Thioredoxion; CR-Trp16, 99.8 3.2E-25 1.1E-29 149.0 0.0 120 10-151 2-126 (143)
102 1o73_A Tryparedoxin; electron 99.9 5.1E-24 1.7E-28 143.4 5.5 121 6-150 2-126 (144)
103 4f82_A Thioredoxin reductase; 99.9 2.2E-22 7.6E-27 139.5 7.8 134 5-153 9-158 (176)
104 2xhf_A Peroxiredoxin 5; oxidor 99.8 8.3E-21 2.8E-25 131.3 10.8 134 5-153 13-152 (171)
105 1xiy_A Peroxiredoxin, pfaop; a 99.8 3.3E-21 1.1E-25 134.7 7.4 131 7-152 2-153 (182)
106 2l57_A Uncharacterized protein 99.8 1.2E-18 4.3E-23 114.6 10.7 113 10-169 4-118 (126)
107 2fwh_A Thiol:disulfide interch 99.8 9.7E-20 3.3E-24 121.4 3.7 117 6-166 4-126 (134)
108 3hxs_A Thioredoxin, TRXP; elec 99.8 3.9E-18 1.3E-22 114.2 10.3 105 17-169 36-140 (141)
109 2ju5_A Thioredoxin disulfide i 99.7 2.3E-18 7.8E-23 117.4 6.6 124 7-170 25-154 (154)
110 3ul3_B Thioredoxin, thioredoxi 99.7 2.9E-17 9.9E-22 108.4 9.2 108 8-165 20-127 (128)
111 3p2a_A Thioredoxin 2, putative 99.7 1.7E-16 5.8E-21 107.2 8.6 115 7-169 30-144 (148)
112 3fk8_A Disulphide isomerase; A 99.6 4.6E-16 1.6E-20 103.1 7.4 97 30-167 27-132 (133)
113 3qfa_C Thioredoxin; protein-pr 99.6 1E-15 3.5E-20 99.3 7.8 88 30-167 29-116 (116)
114 3zzx_A Thioredoxin; oxidoreduc 99.6 8.1E-16 2.8E-20 98.3 7.1 88 28-165 16-103 (105)
115 2kuc_A Putative disulphide-iso 99.6 5.7E-16 1.9E-20 102.2 6.6 101 24-169 19-122 (130)
116 3f9u_A Putative exported cytoc 99.6 1.9E-16 6.4E-21 109.6 4.3 118 30-168 45-166 (172)
117 2voc_A Thioredoxin; electron t 99.6 3.7E-15 1.3E-19 95.9 10.1 91 31-169 16-106 (112)
118 3tco_A Thioredoxin (TRXA-1); d 99.6 1E-15 3.5E-20 97.5 6.4 90 31-168 20-109 (109)
119 2vlu_A Thioredoxin, thioredoxi 99.6 3.9E-16 1.3E-20 101.8 4.4 116 4-169 4-121 (122)
120 2l5l_A Thioredoxin; structural 99.6 3.5E-15 1.2E-19 99.4 9.1 91 31-169 37-127 (136)
121 3cxg_A Putative thioredoxin; m 99.6 3.3E-16 1.1E-20 104.1 4.0 103 17-169 25-130 (133)
122 2dml_A Protein disulfide-isome 99.6 1.9E-14 6.5E-19 94.8 12.2 91 31-168 34-124 (130)
123 2trx_A Thioredoxin; electron t 99.6 7.1E-15 2.4E-19 93.6 9.8 90 31-168 19-108 (108)
124 3f3q_A Thioredoxin-1; His TAG, 99.6 3.1E-15 1.1E-19 95.9 7.9 87 31-167 23-109 (109)
125 1nsw_A Thioredoxin, TRX; therm 99.6 8.7E-16 3E-20 97.5 5.1 90 31-168 16-105 (105)
126 1thx_A Thioredoxin, thioredoxi 99.6 9.3E-15 3.2E-19 94.0 9.8 104 18-169 10-114 (115)
127 3qou_A Protein YBBN; thioredox 99.6 6.9E-15 2.4E-19 109.4 10.1 90 30-167 24-113 (287)
128 2ppt_A Thioredoxin-2; thiredox 99.6 1.2E-15 4.2E-20 104.0 5.2 91 31-169 63-153 (155)
129 2dj1_A Protein disulfide-isome 99.6 4.4E-15 1.5E-19 99.0 7.7 105 17-169 19-125 (140)
130 3d6i_A Monothiol glutaredoxin- 99.6 1.1E-14 3.6E-19 93.6 9.3 90 31-168 20-109 (112)
131 2pu9_C TRX-F, thioredoxin F-ty 99.6 8.7E-15 3E-19 93.9 8.8 92 28-168 20-111 (111)
132 1t00_A Thioredoxin, TRX; redox 99.6 6E-15 2.1E-19 94.7 8.0 90 31-168 22-111 (112)
133 1w4v_A Thioredoxin, mitochondr 99.6 8E-15 2.7E-19 95.4 8.7 90 31-168 30-119 (119)
134 2djj_A PDI, protein disulfide- 99.6 1.6E-14 5.4E-19 93.9 10.0 105 16-169 8-118 (121)
135 3gix_A Thioredoxin-like protei 99.6 1.4E-15 4.9E-20 103.0 5.1 90 31-168 22-121 (149)
136 1z6n_A Hypothetical protein PA 99.6 8.4E-16 2.9E-20 106.0 3.6 47 26-74 48-94 (167)
137 1xfl_A Thioredoxin H1; AT3G510 99.6 9.7E-15 3.3E-19 95.8 8.5 88 31-168 37-124 (124)
138 2o8v_B Thioredoxin 1; disulfid 99.6 3.3E-15 1.1E-19 98.6 5.9 90 31-168 39-128 (128)
139 1dby_A Chloroplast thioredoxin 99.6 1.9E-14 6.4E-19 91.5 9.3 90 31-168 18-107 (107)
140 2e0q_A Thioredoxin; electron t 99.6 4.9E-15 1.7E-19 93.4 6.4 90 31-169 15-104 (104)
141 4euy_A Uncharacterized protein 99.6 8.3E-15 2.8E-19 93.2 7.4 88 31-167 17-104 (105)
142 1ep7_A Thioredoxin CH1, H-type 99.6 1.9E-14 6.6E-19 92.2 9.2 88 32-168 24-111 (112)
143 2yzu_A Thioredoxin; redox prot 99.6 4.9E-15 1.7E-19 94.3 6.1 91 31-169 17-107 (109)
144 2dj3_A Protein disulfide-isome 99.6 3E-14 1E-18 94.2 10.0 111 13-169 5-119 (133)
145 1x5e_A Thioredoxin domain cont 99.6 1.3E-14 4.3E-19 95.2 8.0 89 31-168 22-110 (126)
146 3hz4_A Thioredoxin; NYSGXRC, P 99.6 6E-15 2E-19 98.7 6.5 90 31-168 23-112 (140)
147 3apq_A DNAJ homolog subfamily 99.6 2.4E-15 8.1E-20 107.3 4.7 107 15-169 97-203 (210)
148 3d22_A TRXH4, thioredoxin H-ty 99.6 7.3E-15 2.5E-19 98.0 6.8 89 30-168 44-132 (139)
149 1fb6_A Thioredoxin M; electron 99.6 1.2E-14 4.3E-19 91.9 7.6 102 18-167 3-105 (105)
150 3die_A Thioredoxin, TRX; elect 99.6 1.2E-14 4.1E-19 92.1 7.3 89 31-167 18-106 (106)
151 3m9j_A Thioredoxin; oxidoreduc 99.6 1.6E-14 5.4E-19 91.5 7.8 89 29-167 17-105 (105)
152 3gnj_A Thioredoxin domain prot 99.6 1.8E-14 6.2E-19 92.1 8.1 90 31-168 21-110 (111)
153 2i4a_A Thioredoxin; acidophIle 99.5 4.2E-14 1.4E-18 89.7 9.4 89 31-167 19-107 (107)
154 2lst_A Thioredoxin; structural 99.3 4.4E-16 1.5E-20 102.8 0.0 103 22-169 9-117 (130)
155 1sen_A Thioredoxin-like protei 99.5 8.1E-17 2.8E-21 110.9 -4.0 102 23-168 37-148 (164)
156 2j23_A Thioredoxin; immune pro 99.5 2.4E-14 8.3E-19 93.4 7.8 90 31-168 32-121 (121)
157 2wz9_A Glutaredoxin-3; protein 99.5 2.9E-14 1E-18 96.8 8.3 89 31-169 31-119 (153)
158 1x5d_A Protein disulfide-isome 99.5 3.4E-14 1.2E-18 93.8 8.4 91 31-168 24-117 (133)
159 1faa_A Thioredoxin F; electron 99.5 2.3E-14 8E-19 93.6 7.3 90 30-168 35-124 (124)
160 1r26_A Thioredoxin; redox-acti 99.5 2.8E-14 9.6E-19 93.8 7.6 89 31-169 36-124 (125)
161 2l6c_A Thioredoxin; oxidoreduc 99.5 3.6E-14 1.2E-18 91.0 7.9 89 31-168 18-106 (110)
162 1v98_A Thioredoxin; oxidoreduc 99.5 7E-14 2.4E-18 93.3 9.1 104 18-169 36-139 (140)
163 2xc2_A Thioredoxinn; oxidoredu 99.5 3.1E-14 1.1E-18 92.2 7.1 90 27-167 28-117 (117)
164 1gh2_A Thioredoxin-like protei 99.5 5.6E-14 1.9E-18 89.4 8.1 87 31-167 20-106 (107)
165 1syr_A Thioredoxin; SGPP, stru 99.5 5.2E-14 1.8E-18 90.4 8.0 88 31-168 25-112 (112)
166 2oe3_A Thioredoxin-3; electron 99.5 4.5E-14 1.5E-18 91.2 7.4 85 31-165 29-113 (114)
167 1xwb_A Thioredoxin; dimerizati 99.5 7.9E-14 2.7E-18 88.3 8.3 89 30-167 18-106 (106)
168 2av4_A Thioredoxin-like protei 99.5 9.7E-15 3.3E-19 98.6 4.2 90 31-168 40-139 (160)
169 2vm1_A Thioredoxin, thioredoxi 99.5 6.4E-14 2.2E-18 90.5 7.9 89 31-169 27-115 (118)
170 2vim_A Thioredoxin, TRX; thior 99.5 5.1E-14 1.7E-18 88.9 7.3 89 29-167 16-104 (104)
171 1ti3_A Thioredoxin H, PTTRXH1; 99.5 1.4E-13 4.8E-18 88.2 9.4 89 30-168 24-112 (113)
172 3emx_A Thioredoxin; structural 99.5 2.7E-14 9.3E-19 95.0 6.1 94 31-169 31-127 (135)
173 2dj0_A Thioredoxin-related tra 99.5 2.3E-14 7.8E-19 95.4 5.2 90 30-160 24-113 (137)
174 3dxb_A Thioredoxin N-terminall 99.5 2.5E-14 8.5E-19 102.9 5.4 91 31-169 29-119 (222)
175 3h79_A Thioredoxin-like protei 99.5 7.2E-14 2.5E-18 91.8 7.2 105 16-166 16-126 (127)
176 1zma_A Bacterocin transport ac 99.5 7.3E-14 2.5E-18 90.5 7.0 90 31-164 28-117 (118)
177 2i1u_A Thioredoxin, TRX, MPT46 99.5 6.3E-14 2.2E-18 91.0 6.4 91 31-169 29-119 (121)
178 3uvt_A Thioredoxin domain-cont 99.5 1.4E-13 4.9E-18 87.8 7.9 89 31-166 20-110 (111)
179 2f51_A Thioredoxin; electron t 99.5 2.6E-14 8.8E-19 92.9 4.4 102 17-167 5-112 (118)
180 1qgv_A Spliceosomal protein U5 99.5 6.1E-14 2.1E-18 94.2 5.6 43 31-74 22-64 (142)
181 1oaz_A Thioredoxin 1; immune s 99.5 7.6E-14 2.6E-18 91.4 5.7 90 31-168 20-123 (123)
182 1mek_A Protein disulfide isome 99.5 6.7E-14 2.3E-18 90.4 5.2 92 31-169 23-118 (120)
183 3aps_A DNAJ homolog subfamily 99.4 6.1E-14 2.1E-18 91.3 4.4 91 31-169 20-114 (122)
184 2qsi_A Putative hydrogenase ex 99.4 7.3E-13 2.5E-17 87.8 9.4 87 33-167 34-122 (137)
185 2yj7_A LPBCA thioredoxin; oxid 99.2 9.5E-15 3.3E-19 92.4 0.0 89 31-167 18-106 (106)
186 3idv_A Protein disulfide-isome 99.4 2.4E-13 8.4E-18 98.3 7.3 104 17-168 17-122 (241)
187 2qgv_A Hydrogenase-1 operon pr 99.4 7E-13 2.4E-17 88.2 8.7 91 31-168 33-125 (140)
188 1wmj_A Thioredoxin H-type; str 99.4 4.1E-14 1.4E-18 93.0 1.5 90 30-169 34-123 (130)
189 1nho_A Probable thioredoxin; b 99.4 1.6E-12 5.4E-17 79.0 8.1 83 34-168 3-85 (85)
190 2dbc_A PDCL2, unnamed protein 99.4 7.8E-13 2.7E-17 87.9 7.2 84 31-166 29-119 (135)
191 1fo5_A Thioredoxin; disulfide 99.4 2.1E-12 7.2E-17 78.5 8.1 83 33-167 3-85 (85)
192 2es7_A Q8ZP25_salty, putative 99.4 2E-12 7E-17 86.7 8.3 89 32-169 34-126 (142)
193 1a8l_A Protein disulfide oxido 99.4 4.4E-12 1.5E-16 91.0 9.9 91 31-168 133-226 (226)
194 3t58_A Sulfhydryl oxidase 1; o 99.4 1.5E-12 5.2E-17 104.2 8.0 94 31-168 29-127 (519)
195 3ph9_A Anterior gradient prote 99.4 5.8E-14 2E-18 95.2 -0.2 91 31-168 43-145 (151)
196 3ira_A Conserved protein; meth 99.3 2.3E-12 7.9E-17 89.1 7.1 49 25-74 32-83 (173)
197 3q6o_A Sulfhydryl oxidase 1; p 99.3 3.7E-12 1.3E-16 92.6 8.3 92 31-168 29-127 (244)
198 3ed3_A Protein disulfide-isome 99.3 1.7E-11 5.7E-16 91.9 8.9 93 31-168 34-142 (298)
199 3iv4_A Putative oxidoreductase 99.3 9.8E-12 3.4E-16 79.4 6.5 87 31-163 23-111 (112)
200 2r2j_A Thioredoxin domain-cont 99.3 9.1E-12 3.1E-16 96.3 6.9 105 17-168 7-117 (382)
201 2hls_A Protein disulfide oxido 99.3 7.6E-11 2.6E-15 85.8 11.3 89 29-168 135-226 (243)
202 1a0r_P Phosducin, MEKA, PP33; 99.2 1.4E-11 4.8E-16 89.7 7.1 42 31-74 132-173 (245)
203 3idv_A Protein disulfide-isome 99.2 2.1E-11 7.1E-16 88.0 8.0 90 31-168 146-237 (241)
204 3evi_A Phosducin-like protein 99.2 2.8E-11 9.6E-16 78.6 7.5 41 32-74 23-63 (118)
205 1sji_A Calsequestrin 2, calseq 99.2 4.7E-11 1.6E-15 91.2 9.6 89 31-168 27-122 (350)
206 3f8u_A Protein disulfide-isome 99.2 1.7E-11 5.9E-16 97.2 7.0 91 31-168 369-461 (481)
207 2b5e_A Protein disulfide-isome 99.2 3.2E-11 1.1E-15 96.3 8.3 91 31-168 30-122 (504)
208 2trc_P Phosducin, MEKA, PP33; 99.2 2.9E-11 1E-15 86.6 6.8 41 31-73 119-159 (217)
209 3f8u_A Protein disulfide-isome 99.2 5.4E-11 1.8E-15 94.4 8.3 90 31-168 20-109 (481)
210 3dml_A Putative uncharacterize 99.2 1.6E-11 5.3E-16 79.3 4.0 94 30-168 16-110 (116)
211 2dlx_A UBX domain-containing p 99.1 3.5E-10 1.2E-14 76.6 9.5 92 31-168 41-136 (153)
212 3kp8_A Vkorc1/thioredoxin doma 99.1 7.5E-13 2.6E-17 84.5 -3.6 39 24-62 4-42 (106)
213 1ilo_A Conserved hypothetical 99.1 5.2E-10 1.8E-14 66.5 8.9 37 35-72 2-38 (77)
214 3apo_A DNAJ homolog subfamily 99.1 2.2E-10 7.7E-15 95.8 9.0 93 27-168 450-542 (780)
215 2ywm_A Glutaredoxin-like prote 99.1 2.9E-10 1E-14 81.6 8.4 86 31-168 135-220 (229)
216 1wou_A Thioredoxin -related pr 99.1 9.1E-11 3.1E-15 76.5 4.8 46 28-74 20-72 (123)
217 3uem_A Protein disulfide-isome 99.1 1.6E-10 5.4E-15 88.5 6.8 89 31-167 266-356 (361)
218 3qcp_A QSOX from trypanosoma b 99.0 5.5E-10 1.9E-14 88.0 7.7 44 31-74 41-91 (470)
219 2b5e_A Protein disulfide-isome 99.0 5.8E-10 2E-14 89.0 7.9 89 31-168 375-467 (504)
220 3gyk_A 27KDA outer membrane pr 99.0 2.6E-10 8.7E-15 78.7 4.9 50 22-73 12-61 (175)
221 3apo_A DNAJ homolog subfamily 99.0 1.7E-10 5.9E-15 96.5 4.6 91 31-169 674-768 (780)
222 3us3_A Calsequestrin-1; calciu 99.0 3.4E-09 1.1E-13 81.5 10.1 90 31-168 29-124 (367)
223 3ga4_A Dolichyl-diphosphooligo 98.9 7.3E-09 2.5E-13 71.7 7.7 44 31-74 36-90 (178)
224 3hd5_A Thiol:disulfide interch 98.9 3.1E-09 1.1E-13 74.5 5.7 43 31-74 24-66 (195)
225 2djk_A PDI, protein disulfide- 98.9 4.7E-09 1.6E-13 69.3 6.2 92 31-169 22-116 (133)
226 2e7p_A Glutaredoxin; thioredox 98.8 1.6E-09 5.3E-14 69.6 1.9 38 31-74 18-55 (116)
227 3h93_A Thiol:disulfide interch 98.8 4.2E-09 1.4E-13 73.6 4.1 43 31-74 24-66 (192)
228 1eej_A Thiol:disulfide interch 98.7 8.7E-09 3E-13 73.6 4.6 45 26-74 80-124 (216)
229 1ttz_A Conserved hypothetical 98.7 1.3E-08 4.6E-13 62.2 4.6 75 36-168 3-77 (87)
230 2znm_A Thiol:disulfide interch 98.7 2.6E-08 8.8E-13 69.7 6.7 42 31-73 21-62 (195)
231 1a8l_A Protein disulfide oxido 98.7 1.2E-07 4E-12 67.7 9.7 44 29-74 19-63 (226)
232 2fgx_A Putative thioredoxin; N 98.6 1.1E-07 3.7E-12 60.3 6.8 39 33-74 29-67 (107)
233 2ywm_A Glutaredoxin-like prote 98.5 3.2E-07 1.1E-11 65.6 7.8 91 30-167 19-114 (229)
234 1wjk_A C330018D20RIK protein; 98.5 1E-07 3.5E-12 59.8 4.5 39 31-74 14-52 (100)
235 1hyu_A AHPF, alkyl hydroperoxi 98.5 6.3E-07 2.2E-11 71.9 9.7 42 31-74 116-157 (521)
236 2rem_A Disulfide oxidoreductas 98.5 1.9E-07 6.4E-12 65.1 5.2 42 31-73 24-65 (193)
237 1v58_A Thiol:disulfide interch 98.4 1.4E-07 4.9E-12 68.4 4.1 47 25-74 90-136 (241)
238 3hz8_A Thiol:disulfide interch 98.4 2.6E-07 8.9E-12 64.7 4.4 43 31-74 23-65 (193)
239 2c0g_A ERP29 homolog, windbeut 98.4 2.3E-06 8E-11 62.2 9.3 40 31-74 32-75 (248)
240 2qc7_A ERP31, ERP28, endoplasm 98.3 1.3E-06 4.6E-11 63.2 7.3 40 31-74 21-63 (240)
241 1z6m_A Conserved hypothetical 98.3 7.4E-06 2.5E-10 56.1 10.0 50 25-74 20-70 (175)
242 1t3b_A Thiol:disulfide interch 98.3 1.3E-06 4.3E-11 62.1 5.3 39 31-73 85-123 (211)
243 1ego_A Glutaredoxin; electron 98.2 4.5E-07 1.5E-11 54.6 2.1 38 35-74 2-39 (85)
244 3uem_A Protein disulfide-isome 98.2 7E-06 2.4E-10 62.5 9.1 93 33-168 136-230 (361)
245 4h86_A Peroxiredoxin type-2; o 98.2 2.2E-06 7.6E-11 59.9 5.5 130 6-152 26-180 (199)
246 2lqo_A Putative glutaredoxin R 98.0 7.7E-05 2.6E-09 45.8 9.0 32 36-74 6-37 (92)
247 3kp9_A Vkorc1/thioredoxin doma 98.0 1.6E-06 5.4E-11 64.5 1.4 37 25-61 190-226 (291)
248 1un2_A DSBA, thiol-disulfide i 97.9 1E-06 3.5E-11 62.0 -0.3 53 21-74 100-157 (197)
249 2hls_A Protein disulfide oxido 97.9 3.6E-05 1.2E-09 55.7 7.5 43 32-74 25-73 (243)
250 2k8s_A Thioredoxin; dimer, str 97.9 4.6E-06 1.6E-10 49.7 1.9 36 36-74 4-39 (80)
251 2ec4_A FAS-associated factor 1 97.8 0.00029 1E-08 48.5 10.1 110 29-168 52-168 (178)
252 4dvc_A Thiol:disulfide interch 97.8 3.8E-05 1.3E-09 52.6 5.4 43 31-74 20-62 (184)
253 1h75_A Glutaredoxin-like prote 97.7 5.2E-05 1.8E-09 44.9 4.1 32 36-74 3-34 (81)
254 3gv1_A Disulfide interchange p 97.7 0.00025 8.5E-09 47.3 7.7 38 31-74 13-50 (147)
255 3c7m_A Thiol:disulfide interch 97.6 5.4E-05 1.8E-09 52.4 3.7 44 31-75 16-60 (195)
256 3l9v_A Putative thiol-disulfid 97.4 3.4E-05 1.2E-09 53.6 0.5 44 31-75 13-59 (189)
257 1r7h_A NRDH-redoxin; thioredox 97.4 0.00018 6.1E-09 41.7 3.6 32 36-74 3-34 (75)
258 1kte_A Thioltransferase; redox 97.4 9.2E-05 3.2E-09 46.1 2.4 27 35-61 13-39 (105)
259 4f9z_D Endoplasmic reticulum r 97.2 0.0046 1.6E-07 43.9 10.6 94 33-169 132-226 (227)
260 3feu_A Putative lipoprotein; a 97.2 7.4E-05 2.5E-09 51.8 0.7 40 32-74 22-61 (185)
261 3c1r_A Glutaredoxin-1; oxidize 97.1 0.00057 2E-08 43.7 4.4 35 36-74 27-62 (118)
262 2cq9_A GLRX2 protein, glutared 97.1 0.0011 3.8E-08 43.1 5.5 31 37-74 30-60 (130)
263 3qmx_A Glutaredoxin A, glutare 97.0 0.001 3.5E-08 41.2 4.7 35 33-74 15-49 (99)
264 2klx_A Glutaredoxin; thioredox 97.0 0.0065 2.2E-07 36.3 8.1 31 36-73 8-38 (89)
265 1fov_A Glutaredoxin 3, GRX3; a 97.0 0.0012 3.9E-08 38.9 4.5 32 36-74 3-34 (82)
266 2hze_A Glutaredoxin-1; thiored 96.9 0.00044 1.5E-08 43.9 2.6 35 33-74 18-55 (114)
267 2yan_A Glutaredoxin-3; oxidore 96.8 0.0021 7.1E-08 40.0 4.8 33 34-74 18-55 (105)
268 2ht9_A Glutaredoxin-2; thiored 96.8 0.0015 5.1E-08 43.5 4.2 22 36-57 51-72 (146)
269 1wik_A Thioredoxin-like protei 96.8 0.0044 1.5E-07 38.8 6.2 35 33-74 15-53 (109)
270 3ic4_A Glutaredoxin (GRX-1); s 96.7 0.0044 1.5E-07 37.3 5.9 22 36-57 14-35 (92)
271 2khp_A Glutaredoxin; thioredox 96.7 0.0019 6.3E-08 39.0 4.2 32 36-74 8-39 (92)
272 3rhb_A ATGRXC5, glutaredoxin-C 96.7 0.001 3.6E-08 41.9 3.1 32 36-74 21-52 (113)
273 3l9s_A Thiol:disulfide interch 96.6 0.00064 2.2E-08 47.2 1.4 43 31-74 20-65 (191)
274 3ctg_A Glutaredoxin-2; reduced 96.4 0.0045 1.5E-07 40.2 4.4 35 36-74 39-74 (129)
275 3h8q_A Thioredoxin reductase 3 96.3 0.005 1.7E-07 38.9 4.2 32 36-74 19-50 (114)
276 3nzn_A Glutaredoxin; structura 96.0 0.0017 5.7E-08 40.3 0.9 24 34-57 22-45 (103)
277 3msz_A Glutaredoxin 1; alpha-b 95.8 0.0058 2E-07 36.3 2.7 22 35-56 5-26 (89)
278 1sji_A Calsequestrin 2, calseq 95.4 0.12 4.1E-06 38.9 9.4 96 33-169 246-347 (350)
279 3kzq_A Putative uncharacterize 95.2 0.064 2.2E-06 37.3 6.8 38 35-73 4-41 (208)
280 3gha_A Disulfide bond formatio 95.2 0.028 9.6E-07 39.2 4.8 53 21-74 19-73 (202)
281 3us3_A Calsequestrin-1; calciu 94.9 0.069 2.4E-06 40.6 6.7 96 33-169 248-349 (367)
282 2wci_A Glutaredoxin-4; redox-a 94.9 0.022 7.4E-07 37.3 3.2 35 33-74 35-73 (135)
283 1aba_A Glutaredoxin; electron 94.9 0.069 2.4E-06 31.6 5.3 32 36-74 2-37 (87)
284 3tdg_A DSBG, putative uncharac 94.8 0.014 4.7E-07 42.8 2.2 40 31-73 146-185 (273)
285 2ct6_A SH3 domain-binding glut 94.6 0.11 3.9E-06 32.4 6.0 36 36-74 10-47 (111)
286 1t1v_A SH3BGRL3, SH3 domain-bi 94.5 0.11 3.7E-06 31.2 5.6 36 36-74 4-41 (93)
287 3l4n_A Monothiol glutaredoxin- 94.3 0.027 9.1E-07 36.4 2.6 58 36-102 16-74 (127)
288 3gmf_A Protein-disulfide isome 93.8 0.12 4.1E-06 36.1 5.4 49 25-73 8-58 (205)
289 3bci_A Disulfide bond protein 93.7 0.063 2.2E-06 36.5 3.8 45 30-74 9-55 (186)
290 3zyw_A Glutaredoxin-3; metal b 93.5 0.096 3.3E-06 32.8 4.1 26 42-74 29-54 (111)
291 3f4s_A Alpha-DSBA1, putative u 93.2 0.1 3.4E-06 37.1 4.2 50 25-74 32-83 (226)
292 3gx8_A Monothiol glutaredoxin- 92.7 0.38 1.3E-05 30.5 6.1 25 33-57 16-44 (121)
293 3gn3_A Putative protein-disulf 92.6 0.098 3.4E-06 35.8 3.4 44 31-74 13-56 (182)
294 1u6t_A SH3 domain-binding glut 92.2 0.74 2.5E-05 29.3 6.8 36 36-74 2-39 (121)
295 1z3e_A Regulatory protein SPX; 92.0 0.31 1.1E-05 31.4 5.0 52 36-99 3-54 (132)
296 3ipz_A Monothiol glutaredoxin- 91.8 0.23 7.8E-06 30.8 4.1 36 32-74 17-56 (109)
297 2l4c_A Endoplasmic reticulum r 91.7 1.6 5.6E-05 27.7 9.7 37 31-72 38-74 (124)
298 2wem_A Glutaredoxin-related pr 91.4 0.33 1.1E-05 30.7 4.6 35 33-74 20-59 (118)
299 2axo_A Hypothetical protein AT 90.9 3.5 0.00012 30.0 12.3 38 34-74 44-81 (270)
300 3l78_A Regulatory protein SPX; 90.9 0.45 1.5E-05 30.1 4.8 52 36-99 2-53 (120)
301 1rw1_A Conserved hypothetical 90.0 0.18 6.2E-06 31.7 2.3 49 36-96 2-50 (114)
302 2h8l_A Protein disulfide-isome 89.2 4.5 0.00015 28.6 10.0 33 136-169 197-231 (252)
303 3fz4_A Putative arsenate reduc 89.0 0.61 2.1E-05 29.5 4.3 53 36-100 5-57 (120)
304 3gkx_A Putative ARSC family re 87.7 0.63 2.2E-05 29.5 3.7 53 36-100 6-58 (120)
305 2kok_A Arsenate reductase; bru 87.7 0.29 9.9E-06 31.0 2.1 49 36-96 7-55 (120)
306 1s3c_A Arsenate reductase; ARS 84.5 0.96 3.3E-05 29.5 3.4 49 37-97 5-53 (141)
307 3rdw_A Putative arsenate reduc 84.0 1.1 3.9E-05 28.3 3.5 50 36-97 7-56 (121)
308 1nm3_A Protein HI0572; hybrid, 83.1 0.97 3.3E-05 31.9 3.3 35 33-74 169-203 (241)
309 2in3_A Hypothetical protein; D 77.9 4.6 0.00016 27.6 5.3 39 129-168 172-210 (216)
310 2r2j_A Thioredoxin domain-cont 76.3 13 0.00046 28.0 7.9 43 31-74 235-278 (382)
311 4ev1_A Anabena TIC22; TIC22 fo 76.1 19 0.00065 25.9 11.7 61 8-74 10-86 (252)
312 3feu_A Putative lipoprotein; a 75.1 3.4 0.00012 27.9 3.9 37 130-169 149-185 (185)
313 2jvx_A NF-kappa-B essential mo 74.7 0.36 1.2E-05 22.3 -0.8 21 43-63 5-25 (28)
314 2jad_A Yellow fluorescent prot 74.4 1.2 4.2E-05 33.9 1.6 17 36-52 263-279 (362)
315 3f0i_A Arsenate reductase; str 73.9 1.1 3.9E-05 28.2 1.1 50 37-98 7-56 (119)
316 3f4s_A Alpha-DSBA1, putative u 72.7 1.5 5E-05 31.0 1.6 38 131-168 169-211 (226)
317 2in3_A Hypothetical protein; D 72.3 4.5 0.00015 27.7 4.0 39 34-73 8-46 (216)
318 3ec3_A Protein disulfide-isome 71.5 22 0.00076 25.0 7.7 33 136-169 196-229 (250)
319 3bj5_A Protein disulfide-isome 71.5 18 0.0006 23.4 10.1 25 48-73 48-72 (147)
320 3q6o_A Sulfhydryl oxidase 1; p 68.8 26 0.0009 24.3 9.2 36 131-166 203-238 (244)
321 3bid_A UPF0339 protein NMB1088 67.0 14 0.00048 20.5 4.8 32 136-167 14-45 (64)
322 2x8g_A Thioredoxin glutathione 62.9 6.9 0.00024 31.5 3.8 22 35-56 19-40 (598)
323 2wul_A Glutaredoxin related pr 62.7 9.9 0.00034 23.9 3.8 22 33-54 20-45 (118)
324 3gmf_A Protein-disulfide isome 62.6 9.8 0.00034 26.2 4.1 34 130-169 165-198 (205)
325 3gl5_A Putative DSBA oxidoredu 62.1 15 0.0005 25.9 5.1 42 32-73 1-43 (239)
326 2g2q_A Glutaredoxin-2; thiored 61.8 0.74 2.5E-05 29.0 -1.6 37 33-74 2-38 (124)
327 3gha_A Disulfide bond formatio 61.6 7.7 0.00026 26.6 3.4 33 130-168 160-192 (202)
328 3mjh_B Early endosome antigen 61.4 1 3.5E-05 21.8 -0.8 19 44-62 8-26 (34)
329 4f9z_D Endoplasmic reticulum r 60.5 38 0.0013 23.3 8.6 36 31-71 26-61 (227)
330 3bci_A Disulfide bond protein 59.4 8.9 0.0003 25.5 3.4 33 130-168 146-178 (186)
331 3ghf_A Septum site-determining 57.7 18 0.00062 22.7 4.4 56 30-102 45-100 (120)
332 1th5_A NIFU1; iron-sulfur clus 56.0 22 0.00076 20.3 4.2 40 20-60 22-62 (74)
333 2v2f_A Penicillin binding prot 55.9 7.4 0.00025 17.0 1.7 15 136-150 6-20 (26)
334 3fhk_A UPF0403 protein YPHP; d 55.9 13 0.00046 24.1 3.5 35 132-167 105-143 (147)
335 2dkh_A 3-hydroxybenzoate hydro 49.7 42 0.0014 27.3 6.4 51 6-56 467-522 (639)
336 2imf_A HCCA isomerase, 2-hydro 49.5 9.1 0.00031 26.0 2.1 27 36-62 3-29 (203)
337 3gl5_A Putative DSBA oxidoredu 47.2 23 0.00078 24.9 4.0 35 130-169 180-214 (239)
338 3ga8_A HTH-type transcriptiona 45.4 16 0.00054 20.9 2.4 35 29-63 23-64 (78)
339 4e6z_A Apicoplast TIC22, putat 45.0 37 0.0013 24.8 4.8 60 8-74 73-136 (279)
340 2hz5_A Dynein light chain 2A, 42.8 8.7 0.0003 23.7 1.0 32 136-167 29-60 (106)
341 3l9v_A Putative thiol-disulfid 42.7 33 0.0011 22.9 4.1 37 130-169 142-184 (189)
342 1xhj_A Nitrogen fixation prote 42.6 38 0.0013 20.0 3.8 34 21-55 26-59 (88)
343 2k49_A UPF0339 protein SO_3888 41.3 51 0.0017 20.7 4.5 32 136-167 67-98 (118)
344 3ktb_A Arsenical resistance op 38.3 68 0.0023 19.7 7.4 35 40-74 12-52 (106)
345 1r4w_A Glutathione S-transfera 37.6 20 0.00069 24.7 2.4 35 34-71 6-40 (226)
346 2k7i_A UPF0339 protein ATU0232 37.1 39 0.0013 19.8 3.2 32 136-167 36-67 (83)
347 2ijr_A Hypothetical protein AP 36.9 20 0.00067 26.2 2.2 41 20-60 207-247 (300)
348 3vhs_A ATPase wrnip1; zinc fin 36.7 2.6 8.7E-05 18.7 -1.5 11 42-52 7-17 (29)
349 3kgk_A Arsenical resistance op 36.5 76 0.0026 19.6 7.4 26 49-74 24-49 (110)
350 2k8e_A UPF0339 protein YEGP; p 36.1 57 0.0019 20.8 4.1 32 136-167 83-114 (130)
351 3cwf_A Alkaline phosphatase sy 35.7 20 0.00067 22.0 1.9 15 136-150 50-64 (122)
352 3pe6_A Monoglyceride lipase; a 33.9 96 0.0033 21.1 5.6 62 10-76 14-80 (303)
353 3fmw_A Oxygenase; mithramycin, 33.7 11 0.00038 30.3 0.6 37 6-42 445-483 (570)
354 1pn0_A Phenol 2-monooxygenase; 33.2 2E+02 0.0068 23.5 14.6 37 6-42 479-519 (665)
355 2kii_A Putative uncharacterize 30.4 1.2E+02 0.0042 20.2 5.6 53 8-72 111-163 (181)
356 3bqa_A Sensor protein PHOQ; hi 30.2 41 0.0014 21.8 2.7 26 136-164 43-68 (148)
357 2h8l_A Protein disulfide-isome 29.1 1.4E+02 0.0049 20.6 5.9 36 32-71 24-59 (252)
358 2a2p_A Selenoprotein M, SELM p 28.6 77 0.0026 20.2 3.7 31 135-165 57-88 (129)
359 3ec3_A Protein disulfide-isome 28.3 1.5E+02 0.0051 20.5 10.1 36 32-71 25-60 (250)
360 4gxt_A A conserved functionall 27.9 2E+02 0.0067 21.8 9.0 43 48-99 220-262 (385)
361 3l7h_A RE64145P, roadblock; LC 27.6 18 0.00062 21.8 0.7 15 136-150 20-34 (97)
362 3v67_A Sensor protein CPXA; PA 26.4 38 0.0013 21.8 2.1 16 135-150 56-71 (138)
363 2a4h_A Selenoprotein SEP15; re 26.3 63 0.0022 20.5 3.0 34 135-168 63-97 (126)
364 2pr7_A Haloacid dehalogenase/e 26.0 1.1E+02 0.0037 18.2 4.3 40 34-74 4-43 (137)
365 1s3a_A NADH-ubiquinone oxidore 26.0 98 0.0034 18.5 3.9 34 136-169 67-100 (102)
366 2qa2_A CABE, polyketide oxygen 25.8 63 0.0022 25.3 3.7 33 7-40 396-430 (499)
367 1yd6_A UVRC; DNA binding prote 24.6 96 0.0033 18.6 3.6 19 132-150 13-32 (99)
368 3hju_A Monoglyceride lipase; a 23.4 2E+02 0.0067 20.2 5.9 60 12-76 34-98 (342)
369 3pgv_A Haloacid dehalogenase-l 21.6 2.1E+02 0.0072 19.9 8.1 41 51-100 40-80 (285)
370 3t58_A Sulfhydryl oxidase 1; o 20.4 65 0.0022 25.6 2.8 22 130-151 202-223 (519)
371 4hi4_A Aerotaxis transducer AE 20.4 58 0.002 19.2 2.1 14 136-149 17-30 (121)
372 1bwv_S Rubisco, protein (ribul 20.2 1E+02 0.0036 19.8 3.2 35 39-73 47-87 (138)
No 1
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=100.00 E-value=1e-36 Score=211.18 Aligned_cols=170 Identities=81% Similarity=1.319 Sum_probs=140.6
Q ss_pred CccccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCC
Q 030881 1 MTSQFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (170)
Q Consensus 1 ~~~~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~ 80 (170)
|.......|.++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|.+...+
T Consensus 1 ~~~~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~ 80 (170)
T 2p5q_A 1 MATQTSKNPESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEE 80 (170)
T ss_dssp ---------CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCC
T ss_pred CCCCcCCCCccccceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCC
Confidence 45667789999999999999999999999999999999999999999999999999999999989999999999777767
Q ss_pred CCChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHH
Q 030881 81 PGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLE 160 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~ 160 (170)
+++.+++++|++.+++.+||++...|..+.....++.+.....++.++..+||+|++||||++|+|++++.|..+++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~ 160 (170)
T 2p5q_A 81 PGTNDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLE 160 (170)
T ss_dssp CSCHHHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGH
T ss_pred CCCHHHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHH
Confidence 78899999999756899999985557777766666665543323333357899999999999999999999988999999
Q ss_pred HHHHHHhcCC
Q 030881 161 HDIKKLLGLS 170 (170)
Q Consensus 161 ~~l~~~l~~~ 170 (170)
+.|+++|+++
T Consensus 161 ~~i~~ll~~s 170 (170)
T 2p5q_A 161 RDIKQLLEIS 170 (170)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHhhcC
Confidence 9999999865
No 2
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=100.00 E-value=7e-37 Score=215.90 Aligned_cols=165 Identities=49% Similarity=0.881 Sum_probs=145.8
Q ss_pred cccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCCh
Q 030881 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~ 84 (170)
.+..+.++|+|++.|.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++|+++|+|++|+++..++++.
T Consensus 19 ~~~~~~~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~ 98 (187)
T 3dwv_A 19 KMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNE 98 (187)
T ss_dssp -CTTCCSGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBT
T ss_pred hhcCCCccCCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCH
Confidence 36788999999999999999999999999999999999999999999999999999999999999999998877777889
Q ss_pred HHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccC-CccccCceeEEECCCCcEEEEeCCCCCchHHHHHH
Q 030881 85 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFG-DDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 163 (170)
Q Consensus 85 ~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l 163 (170)
+++++|++.+++++||++.+.|..+.....+|.+.....++.++ ..+||++++||||++|+|++.+.|..+++++.+.|
T Consensus 99 ~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i 178 (187)
T 3dwv_A 99 EEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKL 178 (187)
T ss_dssp THHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHH
Confidence 99999997667999999966688888777778777776666655 46777879999999999999999999999999999
Q ss_pred HHHhcC
Q 030881 164 KKLLGL 169 (170)
Q Consensus 164 ~~~l~~ 169 (170)
+++|+.
T Consensus 179 ~~lL~~ 184 (187)
T 3dwv_A 179 IPLLGS 184 (187)
T ss_dssp HHHC--
T ss_pred HHHHhc
Confidence 999875
No 3
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=100.00 E-value=2.7e-35 Score=203.81 Aligned_cols=164 Identities=48% Similarity=0.830 Sum_probs=139.8
Q ss_pred cccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCCh
Q 030881 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~ 84 (170)
....|.++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|.++..++++.
T Consensus 4 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~ 83 (169)
T 2v1m_A 4 SHKSWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAE 83 (169)
T ss_dssp ---CCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred cccCCcccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCH
Confidence 46789999999999999999999999999999999999999999999999999999999899999999987766667788
Q ss_pred HHHHHHH-HhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHH
Q 030881 85 DQIADFV-CTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 163 (170)
Q Consensus 85 ~~~~~~~-~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l 163 (170)
+++++|+ + +++.+||++.+.|..+.....+|.+......+..+..+.+.|++||||++|+|++++.|..+++++.+.|
T Consensus 84 ~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 162 (169)
T 2v1m_A 84 AEIKKFVTE-KYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDI 162 (169)
T ss_dssp HHHHHHHHH-HHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHH
T ss_pred HHHHHHHHH-hcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHH
Confidence 9999994 5 8899999985447777666556666554444443334777889999999999999999988999999999
Q ss_pred HHHhcC
Q 030881 164 KKLLGL 169 (170)
Q Consensus 164 ~~~l~~ 169 (170)
+++|++
T Consensus 163 ~~ll~~ 168 (169)
T 2v1m_A 163 MELLEK 168 (169)
T ss_dssp HHHHHC
T ss_pred HHHhcc
Confidence 999875
No 4
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=211.86 Aligned_cols=163 Identities=39% Similarity=0.638 Sum_probs=140.6
Q ss_pred ccCCcccccceeeCCC-CCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCCh
Q 030881 6 IQNPESIFDLSVKDAR-GHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~~-g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~ 84 (170)
......+|+|++.|.+ |+.++|++++||++||+|||+||++|+ ++|.|++++++|+++|++||+|++|+|...++++.
T Consensus 29 ~~~~~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~ 107 (215)
T 2i3y_A 29 KDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDN 107 (215)
T ss_dssp CCCCCCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred ccccCCcCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCH
Confidence 3457789999999999 999999999999999999999999999 99999999999999999999999999887778888
Q ss_pred HHHHHHHH-----hhcCCCCCceEEeecCCCCchhHHHHhHhccCC---cc------------CCccccCceeEEECCCC
Q 030881 85 DQIADFVC-----TRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWG---IF------------GDDIQWNFAKFLVDKNG 144 (170)
Q Consensus 85 ~~~~~~~~-----~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~---~~------------~~~i~~~p~~~lid~~G 144 (170)
+++++|++ .+++++||++.+.|.++.....+|.+.....++ .. +..++|+|++||||++|
T Consensus 108 ~~i~~f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G 187 (215)
T 2i3y_A 108 KEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDG 187 (215)
T ss_dssp HHHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTS
T ss_pred HHHHHHHHhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCC
Confidence 99999996 278999999966666677666677776544332 11 13578899999999999
Q ss_pred cEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 145 QVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 145 ~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+|++++.|..+++++++.|+++|++
T Consensus 188 ~vv~~~~g~~~~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 188 IPVMRWSHRATVSSVKTDILAYLKQ 212 (215)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHGGG
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 9999999888899999999999875
No 5
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=100.00 E-value=5.4e-35 Score=209.52 Aligned_cols=164 Identities=37% Similarity=0.660 Sum_probs=139.4
Q ss_pred ccCCcccccceeeCCC-CCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCCh
Q 030881 6 IQNPESIFDLSVKDAR-GHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~~-g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~ 84 (170)
...+.++|+|++.+.+ |+.+++++++||++||+||++||++|+.++|.|++++++|+++|++||+|++|+++..++++.
T Consensus 20 ~~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~ 99 (208)
T 2f8a_A 20 FQSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKN 99 (208)
T ss_dssp --CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCH
T ss_pred hhhcCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCH
Confidence 4578899999999999 999999999999999999999999999999999999999999999999999997766677788
Q ss_pred HHHHHHHH-----hhcCCCCCceEEeecCCCCchhHHHHhHhccCCc-------c------------CCccccCceeEEE
Q 030881 85 DQIADFVC-----TRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGI-------F------------GDDIQWNFAKFLV 140 (170)
Q Consensus 85 ~~~~~~~~-----~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~-------~------------~~~i~~~p~~~li 140 (170)
+++++|++ .+++++||++.+.+.++.....+|.+.....++. . ...+.|+|++|||
T Consensus 100 ~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflI 179 (208)
T 2f8a_A 100 EEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLV 179 (208)
T ss_dssp HHHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEE
T ss_pred HHHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEE
Confidence 99999996 3789999999666777776666677665433321 0 1257888999999
Q ss_pred CCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 141 DKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 141 d~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
|++|+|++++.|..+++++++.|+++|++
T Consensus 180 D~~G~i~~~~~g~~~~~~l~~~I~~ll~~ 208 (208)
T 2f8a_A 180 GPDGVPLRRYSRRFQTIDIEPDIEALLSQ 208 (208)
T ss_dssp CTTSCEEEEECTTSCGGGGHHHHHHHHC-
T ss_pred cCCCcEEEEeCCCCCHHHHHHHHHHHhhC
Confidence 99999999999989999999999999863
No 6
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=100.00 E-value=5.1e-35 Score=206.01 Aligned_cols=163 Identities=47% Similarity=0.839 Sum_probs=140.1
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
..+..|.++|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|++++++++++++++++|++|.++..++++
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~ 100 (185)
T 2gs3_A 21 QSMRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGS 100 (185)
T ss_dssp GGGGGCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSC
T ss_pred hhccCCCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCC
Confidence 44678999999999999999999999999999999999999999999999999999999999999999999776667778
Q ss_pred hHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccC--CccCCccccCceeEEECCCCcEEEEeCCCCCchHHHH
Q 030881 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKW--GIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEH 161 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~ 161 (170)
.+++++|++ +++++||++.+.|.++.....+|.+.....+ +..+..+.|+|++||||++|+|++++.|..+++++.+
T Consensus 101 ~~~~~~~~~-~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~ 179 (185)
T 2gs3_A 101 NEEIKEFAA-GYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEK 179 (185)
T ss_dssp HHHHHHHHH-HTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGG
T ss_pred HHHHHHHHH-HcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHH
Confidence 899999996 8899999986557777666656665544333 3333457778899999999999999999888999999
Q ss_pred HHHHHh
Q 030881 162 DIKKLL 167 (170)
Q Consensus 162 ~l~~~l 167 (170)
.|+++|
T Consensus 180 ~i~~lL 185 (185)
T 2gs3_A 180 DLPHYF 185 (185)
T ss_dssp GHHHHC
T ss_pred HHHHhC
Confidence 988875
No 7
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=100.00 E-value=6.9e-35 Score=204.44 Aligned_cols=160 Identities=38% Similarity=0.734 Sum_probs=137.4
Q ss_pred cccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCCh
Q 030881 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~ 84 (170)
....|.++|+|++.|.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++|+.+++|++|+|...++++.
T Consensus 11 ~~~~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~ 90 (180)
T 3kij_A 11 LKPKINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPS 90 (180)
T ss_dssp CCCCCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCH
T ss_pred hcCCcCcccceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999998888888899
Q ss_pred HHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHH
Q 030881 85 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIK 164 (170)
Q Consensus 85 ~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~ 164 (170)
+++++|+++.++.+||++.+.+..+.....++.+.....+ ....|++++||||++|+|++++.|..+++++.+.|+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~----~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 166 (180)
T 3kij_A 91 KEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSK----KEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIA 166 (180)
T ss_dssp HHHHHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHT----CCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHH
T ss_pred HHHHHHHHHhcCCCCceeeeeeccCccccHHHHHHHhcCC----CCccccceEEEECCCCCEEEEECCCCCHHHHHHHHH
Confidence 9999999832899999986566666666556666654433 233345569999999999999999889888888887
Q ss_pred HHhc
Q 030881 165 KLLG 168 (170)
Q Consensus 165 ~~l~ 168 (170)
++|+
T Consensus 167 ~lL~ 170 (180)
T 3kij_A 167 ALVR 170 (180)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 8
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.8e-34 Score=206.52 Aligned_cols=161 Identities=37% Similarity=0.627 Sum_probs=136.1
Q ss_pred cCCcccccceeeCCC-CCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChH
Q 030881 7 QNPESIFDLSVKDAR-GHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (170)
Q Consensus 7 ~~g~~~p~f~l~~~~-g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~ 85 (170)
.....+|+|++.|.+ |+.++|++++||++||+||++||++| .++|.|++++++|+++|++||+|++|+|...++++.+
T Consensus 12 ~~~~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~ 90 (207)
T 2r37_A 12 GISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 90 (207)
T ss_dssp ---CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH
T ss_pred cccCccCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH
Confidence 456789999999999 99999999999999999999999999 7999999999999999999999999988777778889
Q ss_pred HHHHHHH-----hhcCCCCCceEEeecCCCCchhHHHHhHhccCC---cc------------CCccccCceeEEECCCCc
Q 030881 86 QIADFVC-----TRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWG---IF------------GDDIQWNFAKFLVDKNGQ 145 (170)
Q Consensus 86 ~~~~~~~-----~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~---~~------------~~~i~~~p~~~lid~~G~ 145 (170)
++++|++ .+++++||++.+.+.++.....+|.+.....++ .. +..+.|+|++||||++|+
T Consensus 91 ~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~ 170 (207)
T 2r37_A 91 EILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGI 170 (207)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSC
T ss_pred HHHHHHHhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCc
Confidence 9999996 278999999966666676666667776544332 11 135788899999999999
Q ss_pred EEEEeCCCCCchHHHHHHHHHhc
Q 030881 146 VVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 146 i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
|++++.|..+++++++.|+++|+
T Consensus 171 i~~~~~g~~~~~~l~~~I~~ll~ 193 (207)
T 2r37_A 171 PIMRWHHRTTVSNVKMDILSYMR 193 (207)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHh
Confidence 99999988889999999999885
No 9
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=203.34 Aligned_cols=163 Identities=47% Similarity=0.851 Sum_probs=139.4
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
..+..|.++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|.++..++++
T Consensus 19 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~ 98 (183)
T 2obi_A 19 DDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGS 98 (183)
T ss_dssp CCGGGCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred cCCcccCcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCC
Confidence 45678999999999999999999999999999999999999999999999999999999989999999999776667788
Q ss_pred hHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccC--CccCCccccCceeEEECCCCcEEEEeCCCCCchHHHH
Q 030881 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKW--GIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEH 161 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~ 161 (170)
.+++++|++ +++++||++.+.|..+.....+|.+.....+ +..+..+.+.|++||||++|+|++++.|..+++++.+
T Consensus 99 ~~~~~~~~~-~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~ 177 (183)
T 2obi_A 99 NEEIKEFAA-GYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEK 177 (183)
T ss_dssp HHHHHHHHH-TTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHT
T ss_pred HHHHHHHHH-HcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHH
Confidence 999999997 8899999985447777666666666554333 3333457778899999999999999999888888888
Q ss_pred HHHHHh
Q 030881 162 DIKKLL 167 (170)
Q Consensus 162 ~l~~~l 167 (170)
.|+++|
T Consensus 178 ~i~~lL 183 (183)
T 2obi_A 178 DLPHYF 183 (183)
T ss_dssp TSGGGC
T ss_pred HHHHhC
Confidence 887764
No 10
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=201.58 Aligned_cols=161 Identities=39% Similarity=0.716 Sum_probs=135.2
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
..+..|.++|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|++++++++++++.+++|++|+++..++++
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~ 100 (181)
T 2p31_A 21 QSMQQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDS 100 (181)
T ss_dssp ------CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred CcCCcCCccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCC
Confidence 34678999999999999999999999999999999999999999999999999999999999999999998766666678
Q ss_pred hHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHH
Q 030881 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 163 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l 163 (170)
.+++++|+++.++++||++.+.|.++.....++.+.....| ..+.|+.++||||++|+|++++.|..+++++.+.|
T Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P----~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i 176 (181)
T 2p31_A 101 NKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQTSG----KEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQI 176 (181)
T ss_dssp HHHHHHHHHHHHCCCSCBBCCCCCSSTTSCHHHHHHHHHHS----CCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCceeEeecccCCccchhhhhhhhhcCC----CccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHH
Confidence 99999999832899999996556666666656666666666 34556668999999999999999988999999999
Q ss_pred HHHhc
Q 030881 164 KKLLG 168 (170)
Q Consensus 164 ~~~l~ 168 (170)
+++|+
T Consensus 177 ~~ll~ 181 (181)
T 2p31_A 177 TALVR 181 (181)
T ss_dssp HTTCC
T ss_pred HHHhC
Confidence 98874
No 11
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=3.7e-34 Score=202.36 Aligned_cols=164 Identities=48% Similarity=0.867 Sum_probs=139.1
Q ss_pred cccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCCh
Q 030881 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~ 84 (170)
.+..++++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|.++..++++.
T Consensus 21 ~~~~~~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~ 100 (190)
T 2vup_A 21 HMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNE 100 (190)
T ss_dssp ---CCCSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCH
T ss_pred cCCCCCcccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCH
Confidence 36789999999999999999999999999999999999999999999999999999999899999999997766677789
Q ss_pred HHHHHHH-HhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCC-ccccCceeEEECCCCcEEEEeCCCCCchHHHHH
Q 030881 85 DQIADFV-CTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGD-DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHD 162 (170)
Q Consensus 85 ~~~~~~~-~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~ 162 (170)
+++++|+ + +++.+||++.+.|..+.....++.+.....++..+. .+.|+|++||||++|+|++++.|..+++++.+.
T Consensus 101 ~~~~~~~~~-~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 179 (190)
T 2vup_A 101 EEIKEFVCT-KFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKK 179 (190)
T ss_dssp HHHHHHHHH-HHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHH-hcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHH
Confidence 9999999 6 789999999655777776665666654433333222 355777999999999999999998899999999
Q ss_pred HHHHhcC
Q 030881 163 IKKLLGL 169 (170)
Q Consensus 163 l~~~l~~ 169 (170)
|+++|++
T Consensus 180 i~~ll~~ 186 (190)
T 2vup_A 180 LIPLLES 186 (190)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9999864
No 12
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-33 Score=195.51 Aligned_cols=161 Identities=50% Similarity=0.888 Sum_probs=120.0
Q ss_pred CCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHH
Q 030881 8 NPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQI 87 (170)
Q Consensus 8 ~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~ 87 (170)
.+..+|+|++.|.+|+.+++++++||++||+||++||++|+ ++|.|++++++++++++.+++|++|+++..++++.+.+
T Consensus 8 ~~~~~~~f~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~ 86 (171)
T 3cmi_A 8 HMSEFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEI 86 (171)
T ss_dssp --CGGGGCCCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC----------
T ss_pred chhheeeeEEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHH
Confidence 46789999999999999999999999999999999999999 99999999999999999999999986655556788899
Q ss_pred HHHH-HhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCC-ccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHH
Q 030881 88 ADFV-CTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGD-DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKK 165 (170)
Q Consensus 88 ~~~~-~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~ 165 (170)
++|+ + +++++||++.+.|..+.....++++......+..+. .++|++++||||++|+|++++.|..+++++.+.|++
T Consensus 87 ~~~~~~-~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 165 (171)
T 3cmi_A 87 AQFCQL-NYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEE 165 (171)
T ss_dssp ---------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHH
T ss_pred HHHHHh-ccCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 9999 6 889999999655666665655666554333322211 244566999999999999999998899999999999
Q ss_pred HhcCC
Q 030881 166 LLGLS 170 (170)
Q Consensus 166 ~l~~~ 170 (170)
+|+++
T Consensus 166 ll~~~ 170 (171)
T 3cmi_A 166 LLKEV 170 (171)
T ss_dssp HHTCC
T ss_pred HHHhc
Confidence 99764
No 13
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.97 E-value=2.1e-31 Score=182.42 Aligned_cols=149 Identities=19% Similarity=0.302 Sum_probs=123.9
Q ss_pred cCCcccccceeeCC--CCCeecCCCCCCcEEEEEEecCCCCCChhh-HHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 7 QNPESIFDLSVKDA--RGHEVDLSTYKGKVLLIVNVASKCGMTNSN-YIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 7 ~~g~~~p~f~l~~~--~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~-~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
+.|.++|+|++.+. +|+.+++++++||++||+||++||++|+.+ +|.|+++++++++.++.+++|++| +...+.++
T Consensus 1 s~g~~aP~f~l~~~~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~ 79 (158)
T 3eyt_A 1 SNAMKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTV-FEHHEAMT 79 (158)
T ss_dssp CCCEECCCCCEEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSC
T ss_pred CCCCcCCCceehhhhcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEec-ccccccCC
Confidence 36899999999994 789999999999999999999999999997 999999999999889999999987 33333568
Q ss_pred hHHHHHHHHhhcCCCCCceEEeecCCCCc-hhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHH
Q 030881 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHA-SPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHD 162 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~-~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~ 162 (170)
.+.+++|++ +++++||++ .|..+... ..+... +++.+.|++||||++|+|++++.|..+.+++.+.
T Consensus 80 ~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 146 (158)
T 3eyt_A 80 PISLKAFLH-EYRIKFPVG--VDQPGDGAMPRTMAA----------YQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAE 146 (158)
T ss_dssp HHHHHHHHH-HTTCCSCEE--EECCCSSSSCHHHHH----------TTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHH
T ss_pred HHHHHHHHH-HcCCCceEE--EcCccchhhHHHHHH----------cCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHH
Confidence 999999997 889999988 45444211 011111 3345556999999999999999999999999999
Q ss_pred HHHHhcC
Q 030881 163 IKKLLGL 169 (170)
Q Consensus 163 l~~~l~~ 169 (170)
|+++|++
T Consensus 147 i~~ll~~ 153 (158)
T 3eyt_A 147 IATLLGE 153 (158)
T ss_dssp HHHHHTS
T ss_pred HHHHhcc
Confidence 9999864
No 14
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.97 E-value=4e-32 Score=186.58 Aligned_cols=149 Identities=20% Similarity=0.232 Sum_probs=108.9
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~ 82 (170)
+++..|+++|+|+|.+.+|+.++|++++||++||+|| ++||++|+.+++.|+++++++++.++.+++||.|
T Consensus 2 ~~l~vG~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d-------- 73 (157)
T 4g2e_A 2 HMVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVD-------- 73 (157)
T ss_dssp CCCCTTSBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESS--------
T ss_pred CcCCCCCCCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeeccc--------
Confidence 4688999999999999999999999999999999999 8999999999999999999999999999999986
Q ss_pred ChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC-----CCch
Q 030881 83 SNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT-----TSLL 157 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~-----~~~~ 157 (170)
+.+.+++|++ +++++||++ .|.++..+. .|+.. ...++.. ...-..|++||||++|+|++.+.+. .+.+
T Consensus 74 ~~~~~~~~~~-~~~~~~p~l--~D~~~~v~~-~ygv~-~~~~~~~-~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~ 147 (157)
T 4g2e_A 74 PPFSNKAFKE-HNKLNFTIL--SDYNREVVK-KYNVA-WEFPALP-GYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYD 147 (157)
T ss_dssp CHHHHHHHHH-HTTCCSEEE--ECTTSHHHH-HTTCE-EECTTST-TCEEECEEEEEECTTSBEEEEEEESSTTCCCCHH
T ss_pred chhHHHHHHH-HcCCcEEEE--EcCCcHHHH-HcCCc-cccccCC-CcceeeeeEEEECCCCEEEEEEECCCCCCCCCHH
Confidence 6888999987 889999999 565543322 11110 0011111 1112345899999999999986442 2445
Q ss_pred HHHHHHHHH
Q 030881 158 SLEHDIKKL 166 (170)
Q Consensus 158 ~l~~~l~~~ 166 (170)
++.+.|++|
T Consensus 148 eil~~l~~L 156 (157)
T 4g2e_A 148 EIEKVVKSL 156 (157)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 566666543
No 15
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.97 E-value=5.1e-31 Score=180.75 Aligned_cols=148 Identities=14% Similarity=0.255 Sum_probs=124.8
Q ss_pred CCcccccceeeC-CCCCeecCCCCCCcEEEEEEecCCCCCChhh-HHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChH
Q 030881 8 NPESIFDLSVKD-ARGHEVDLSTYKGKVLLIVNVASKCGMTNSN-YIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (170)
Q Consensus 8 ~g~~~p~f~l~~-~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~-~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~ 85 (170)
.|.++|+|++.+ .+|+.+++++++||++||+||++||++|..+ ++.|++++++++++++.+++|+++ ++..+.++.+
T Consensus 5 ~g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~~ 83 (160)
T 3lor_A 5 DNAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV-FEHHDVMTPE 83 (160)
T ss_dssp TTCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCHH
T ss_pred CCCcCCCcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc-ccccccCCHH
Confidence 789999999999 8999999999999999999999999999995 999999999999989999999997 4444456899
Q ss_pred HHHHHHHhhcCCCCCceEEeecCCC--CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHH
Q 030881 86 QIADFVCTRFKSEFPIFEKIDVNGE--HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 163 (170)
Q Consensus 86 ~~~~~~~~~~~~~~p~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l 163 (170)
.+++|++ +++.+||++ .|..+. ....+... +++...|++||||++|+|++++.|..+.+++.+.|
T Consensus 84 ~~~~~~~-~~~~~~~~~--~d~~~~~~~~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 150 (160)
T 3lor_A 84 ALKVFID-EFGIKFPVA--VDMPREGQRIPSTMKK----------YRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLL 150 (160)
T ss_dssp HHHHHHH-HTTCCSCEE--EECCCTTCSSCHHHHH----------TTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHH-HcCCCCcEE--ECCccccchhhhHHHh----------cccCccceEEEECCCCcEEEEecCcCCHHHHHHHH
Confidence 9999997 889999988 454433 11111111 23445569999999999999999999999999999
Q ss_pred HHHhcC
Q 030881 164 KKLLGL 169 (170)
Q Consensus 164 ~~~l~~ 169 (170)
+++|++
T Consensus 151 ~~ll~~ 156 (160)
T 3lor_A 151 GSLLSE 156 (160)
T ss_dssp HHHHTC
T ss_pred HHHHhc
Confidence 999975
No 16
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.97 E-value=2.3e-30 Score=180.00 Aligned_cols=156 Identities=16% Similarity=0.250 Sum_probs=120.9
Q ss_pred ccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCC-CChhhHHHHHHHHHHhccC--CcEEEEeecCCCCCCCCC
Q 030881 6 IQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCG-MTNSNYIELSQLYDKYKDQ--GLEILAFPCNQFGEEEPG 82 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~-~C~~~~~~l~~~~~~~~~~--~v~~v~is~d~~~~~~~~ 82 (170)
.+.|.++|+|+|.|.+|+++++++++||++||+||+|||+ +|...++.|.++++.+++. ++++|+||+|+ +.|
T Consensus 6 ~P~~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp----~~D 81 (170)
T 4hde_A 6 KPLNWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDP----DLD 81 (170)
T ss_dssp SCCCBCCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT----TTC
T ss_pred cCCCCcCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCc----ccc
Confidence 4578899999999999999999999999999999999998 8999999999999998765 49999999984 457
Q ss_pred ChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhH----hccCCccCCccccCceeEEECCCCcEEEEeCCC--CCc
Q 030881 83 SNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLK----SGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT--TSL 156 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~----~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~--~~~ 156 (170)
+++.+++|++ +++.+++.+ ....+...+.+..... ........+.+.|.|++||||++|+|+..+.|. .+.
T Consensus 82 tp~~l~~y~~-~~~~~~~~~--~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~ 158 (170)
T 4hde_A 82 KPENLKAFIQ-KFTEDTSNW--NLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPY 158 (170)
T ss_dssp CHHHHHHHHT-TTCSCCTTE--EEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCH
T ss_pred cHHHHHHHHH-HcCCCCCCc--eecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCH
Confidence 8999999997 888877765 2333333332222111 111111225677888999999999999988763 345
Q ss_pred hHHHHHHHHHhc
Q 030881 157 LSLEHDIKKLLG 168 (170)
Q Consensus 157 ~~l~~~l~~~l~ 168 (170)
+++.+.|++|++
T Consensus 159 ~~l~~~ik~Lle 170 (170)
T 4hde_A 159 EDIIRDMKRLAE 170 (170)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 678888988874
No 17
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=4.6e-30 Score=174.59 Aligned_cols=142 Identities=20% Similarity=0.232 Sum_probs=119.9
Q ss_pred ccccCCcccccceeeCCCCCeecCC--CCCCcEEEEEEecCCCCC--ChhhHHHHHHHHHHh-ccCCcEEEEeecCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLS--TYKGKVLLIVNVASKCGM--TNSNYIELSQLYDKY-KDQGLEILAFPCNQFGE 78 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~--~~~gk~~lv~f~~~~C~~--C~~~~~~l~~~~~~~-~~~~v~~v~is~d~~~~ 78 (170)
..+..|+++|+|++.+.+|+.++++ +++||++||+||++||++ |+.++|.|+++++++ +++++.+++|++|.
T Consensus 3 ~~l~~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~--- 79 (150)
T 3fw2_A 3 AKSEIGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDV--- 79 (150)
T ss_dssp CTTSTTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCS---
T ss_pred ccccCCCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCC---
Confidence 4578999999999999999999999 999999999999999999 999999999999999 88889999999983
Q ss_pred CCCCChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchH
Q 030881 79 EEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLS 158 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~ 158 (170)
+.+.++++++ +++.+||.+ .|..+....-... +++.+.|++||||++|+|++++. +.++
T Consensus 80 ----~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~~~~-----------~~v~~~P~~~lid~~G~i~~~~~---~~~~ 138 (150)
T 3fw2_A 80 ----DKQQWKDAIK-RDTLDWEQV--CDFGGLNSEVAKQ-----------YSIYKIPANILLSSDGKILAKNL---RGEE 138 (150)
T ss_dssp ----CHHHHHHHHH-HTTCCSEEE--CCSCGGGCHHHHH-----------TTCCSSSEEEEECTTSBEEEESC---CHHH
T ss_pred ----CHHHHHHHHH-HhCCCceEE--EcCcccchHHHHH-----------cCCCccCeEEEECCCCEEEEccC---CHHH
Confidence 6789999997 889999988 4543222221112 34555669999999999999963 7788
Q ss_pred HHHHHHHHhcC
Q 030881 159 LEHDIKKLLGL 169 (170)
Q Consensus 159 l~~~l~~~l~~ 169 (170)
+.+.|++++++
T Consensus 139 l~~~l~~ll~~ 149 (150)
T 3fw2_A 139 LKKKIENIVEE 149 (150)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999998864
No 18
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.97 E-value=1.9e-30 Score=187.08 Aligned_cols=149 Identities=19% Similarity=0.231 Sum_probs=124.5
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcE-EEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKV-LLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~-~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~ 82 (170)
..+..|+++|+|++.+.+|+.+++++++||+ +||+||++||++|+.+++.|++++++++++|+.+|+|++|++...+.+
T Consensus 30 ~~l~~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d 109 (218)
T 3u5r_E 30 NSITLGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEE 109 (218)
T ss_dssp CCCCTTCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGG
T ss_pred CcCCCCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccC
Confidence 4578999999999999999999999999995 999999999999999999999999999999999999999876665567
Q ss_pred ChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeC---------CC
Q 030881 83 SNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY---------PT 153 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~---------~~ 153 (170)
+.+.+++|++ +++++||++ .|..+.... .| ++...|++||||++|+|+++.. +.
T Consensus 110 ~~~~~~~~~~-~~~~~~~~l--~D~~~~~~~---~~-----------~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~ 172 (218)
T 3u5r_E 110 TLERVGAEVK-AYGYGFPYL--KDASQSVAK---AY-----------GAACTPDFFLYDRERRLVYHGQFDDARPGNGKD 172 (218)
T ss_dssp SHHHHHHHHH-HHTCCSCEE--ECTTCHHHH---HH-----------TCCEESEEEEECTTCBEEEEECSSSCCTTSCCC
T ss_pred CHHHHHHHHH-HhCCCccEE--ECCccHHHH---Hc-----------CCCCCCeEEEECCCCcEEEeccccccccccccc
Confidence 9999999997 889999998 554332221 22 3444459999999999998743 23
Q ss_pred CCchHHHHHHHHHhcC
Q 030881 154 TSLLSLEHDIKKLLGL 169 (170)
Q Consensus 154 ~~~~~l~~~l~~~l~~ 169 (170)
.+.+++.+.|++++++
T Consensus 173 ~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 173 VTGADLRAAVDAVLKG 188 (218)
T ss_dssp CCCHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHcC
Confidence 3467899999998853
No 19
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.97 E-value=3.1e-30 Score=174.10 Aligned_cols=137 Identities=12% Similarity=0.171 Sum_probs=107.2
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
..+..|+++|+|++ +.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++++.+++|++|. +
T Consensus 5 ~~l~~G~~~P~f~l-~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~-------~ 76 (143)
T 4fo5_A 5 EGVNPGDLAPRIEF-LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDE-------K 76 (143)
T ss_dssp BSSSTTSBCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCS-------C
T ss_pred cccCCcccCCceEE-cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccC-------C
Confidence 45789999999999 999999999999999999999999999999999999999999998899999999983 6
Q ss_pred hHHHHHHHHhhcCCCC-CceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHH
Q 030881 84 NDQIADFVCTRFKSEF-PIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHD 162 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~-p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~ 162 (170)
.++++++++ +++++| +.+ .|..+........ +++.+.|++||||++|+|++++. ..+++.+.
T Consensus 77 ~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~~~~-----------~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~ 139 (143)
T 4fo5_A 77 ESIFTETVK-IDKLDLSTQF--HEGLGKESELYKK-----------YDLRKGFKNFLINDEGVIIAANV---TPEKLTEI 139 (143)
T ss_dssp HHHHHHHHH-HHTCCGGGEE--ECTTGGGSHHHHH-----------TTGGGCCCEEEECTTSBEEEESC---CHHHHHHH
T ss_pred HHHHHHHHH-HhCCCCceee--ecccccchHHHHH-----------cCCCCCCcEEEECCCCEEEEccC---CHHHHHHH
Confidence 788999997 779999 666 4543322221112 23445559999999999999853 46667666
Q ss_pred HHH
Q 030881 163 IKK 165 (170)
Q Consensus 163 l~~ 165 (170)
|++
T Consensus 140 l~~ 142 (143)
T 4fo5_A 140 LKA 142 (143)
T ss_dssp HTC
T ss_pred HHh
Confidence 654
No 20
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.97 E-value=3.7e-30 Score=173.28 Aligned_cols=137 Identities=14% Similarity=0.167 Sum_probs=113.8
Q ss_pred cCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHH---HHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 7 QNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQ---LYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 7 ~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~---~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
.+|.++|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|.+ ++++++++++.+++|++|. +
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~-------~ 74 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDE-------N 74 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSS-------C
T ss_pred CCCCcCCCCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecC-------C
Confidence 57999999999999999999999999999999999999999999999998 9999998899999999973 7
Q ss_pred hHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHH
Q 030881 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 163 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l 163 (170)
.+.+.++++ +++.+||++ .|..+.... ... +++.+.|++||||++|+|++. ..+.+++++.|
T Consensus 75 ~~~~~~~~~-~~~~~~~~~--~d~~~~~~~-------~~~-----~~v~~~P~~~lid~~G~i~~~---~~~~~~l~~~l 136 (142)
T 3ewl_A 75 REEWATKAV-YMPQGWIVG--WNKAGDIRT-------RQL-----YDIRATPTIYLLDGRKRVILK---DTSMEQLIDYL 136 (142)
T ss_dssp HHHHHHHHT-TSCTTCEEE--ECTTCHHHH-------TTC-----SCCCSSSEEEEECTTCBEEEC---SCCHHHHHHHH
T ss_pred HHHHHHHHH-HcCCCccee--eCCccchhh-------HHH-----cCCCCCCeEEEECCCCCEEec---CCCHHHHHHHH
Confidence 888999997 889999988 554432210 001 345666799999999999985 46788898888
Q ss_pred HHHhc
Q 030881 164 KKLLG 168 (170)
Q Consensus 164 ~~~l~ 168 (170)
+++.+
T Consensus 137 ~~~~~ 141 (142)
T 3ewl_A 137 ATQAG 141 (142)
T ss_dssp HC---
T ss_pred HHHcc
Confidence 87654
No 21
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.97 E-value=4.9e-30 Score=179.88 Aligned_cols=144 Identities=15% Similarity=0.176 Sum_probs=123.2
Q ss_pred ccCCcccccceeeCC--CCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCc------EEEEeecCCCC
Q 030881 6 IQNPESIFDLSVKDA--RGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGL------EILAFPCNQFG 77 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~--~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v------~~v~is~d~~~ 77 (170)
...|.++|+|++.+. +|+.+++++++||++||+||++||++|+.+++.|++++++++++++ .+++|++|.
T Consensus 31 ~~~g~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~-- 108 (183)
T 3lwa_A 31 EADRQQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD-- 108 (183)
T ss_dssp GGGCCCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC--
T ss_pred cccCCCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC--
Confidence 567899999999999 9999999999999999999999999999999999999999999889 999999872
Q ss_pred CCCCCChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCch
Q 030881 78 EEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLL 157 (170)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~ 157 (170)
++.+.+++|++ +++++||++ .|..+.....+. . +.+...|++||||++|+|++++.|..+.+
T Consensus 109 ----~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~~~---------~--~~v~~~P~~~lid~~G~i~~~~~g~~~~~ 170 (183)
T 3lwa_A 109 ----YSRDIAQDFVT-DNGLDYPSI--YDPPFMTAASLG---------G--VPASVIPTTIVLDKQHRPAAVFLREVTSK 170 (183)
T ss_dssp ----CCHHHHHHHHH-HTTCCSCEE--ECTTCGGGGGTT---------T--CCTTCCSEEEEECTTSCEEEEECSCCCHH
T ss_pred ----CCHHHHHHHHH-HcCCCccEE--ECCcchHHHHhc---------c--CCCCCCCeEEEECCCCcEEEEEcCCCCHH
Confidence 26889999997 889999998 565544333210 0 23455569999999999999999988999
Q ss_pred HHHHHHHHHhcC
Q 030881 158 SLEHDIKKLLGL 169 (170)
Q Consensus 158 ~l~~~l~~~l~~ 169 (170)
++.+.|+++|++
T Consensus 171 ~l~~~l~~ll~~ 182 (183)
T 3lwa_A 171 DVLDVALPLVDE 182 (183)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999999875
No 22
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.97 E-value=3.8e-32 Score=187.97 Aligned_cols=151 Identities=17% Similarity=0.252 Sum_probs=116.5
Q ss_pred cccccCCcccccceeeCCCCCeecCCCC--CCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCC
Q 030881 3 SQFIQNPESIFDLSVKDARGHEVDLSTY--KGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEE 79 (170)
Q Consensus 3 ~~~~~~g~~~p~f~l~~~~g~~~~l~~~--~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~ 79 (170)
..++..|+++|+|+|.|.+|+.++|+++ +||++||+|| ++|||+|..+++.|++++++|+++|+.+++||.|
T Consensus 2 ~gml~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d----- 76 (164)
T 4gqc_A 2 KGLVELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVD----- 76 (164)
T ss_dssp --CCCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESS-----
T ss_pred CCcccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCC-----
Confidence 3468899999999999999999999998 8999999988 9999999999999999999999999999999986
Q ss_pred CCCChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC-----C
Q 030881 80 EPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT-----T 154 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~-----~ 154 (170)
+.+.+++|.+ +++++||++ .|.++..+. .|+.......+. .....|++||||++|+|++.+.+. .
T Consensus 77 ---~~~~~~~~~~-~~~~~fp~l--~D~~~~v~~-~ygv~~~~~~~~---~~~~~p~tflID~~G~I~~~~~~~~~~~~~ 146 (164)
T 4gqc_A 77 ---SPWCLKKFKD-ENRLAFNLL--SDYNREVIK-LYNVYHEDLKGL---KMVAKRAVFIVKPDGTVAYKWVTDNPLNEP 146 (164)
T ss_dssp ---CHHHHHHHHH-HTTCCSEEE--ECTTSHHHH-HTTCEEEEETTE---EEEECCEEEEECTTSBEEEEEECSCTTCCC
T ss_pred ---CHHHHHHHHH-hcCccccee--ecCchHHHH-HcCCcccccccC---cCCeeeEEEEECCCCEEEEEEEeCCCCCCC
Confidence 7888999987 889999999 666544322 121110001111 111245899999999999986442 2
Q ss_pred CchHHHHHHHHHhc
Q 030881 155 SLLSLEHDIKKLLG 168 (170)
Q Consensus 155 ~~~~l~~~l~~~l~ 168 (170)
+.+++.+.|++++.
T Consensus 147 ~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 147 DYDEVVREANKIAG 160 (164)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhc
Confidence 45677777777654
No 23
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.97 E-value=8e-30 Score=173.39 Aligned_cols=139 Identities=19% Similarity=0.336 Sum_probs=120.1
Q ss_pred cCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHH
Q 030881 7 QNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQ 86 (170)
Q Consensus 7 ~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~ 86 (170)
+.|+++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|. +.+.
T Consensus 1 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~-------~~~~ 73 (151)
T 2f9s_A 1 SEGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGE-------SKIA 73 (151)
T ss_dssp -CCEECCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESC-------CHHH
T ss_pred CCCCcCCcceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC-------CHHH
Confidence 368999999999999999999999999999999999999999999999999999998889999999973 6788
Q ss_pred HHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHH
Q 030881 87 IADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 166 (170)
Q Consensus 87 ~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~ 166 (170)
+++|++ +++.+||++ .|....... . +++.+.|++|+||++|++++.+.|..+.+++.+.|+++
T Consensus 74 ~~~~~~-~~~~~~~~~--~d~~~~~~~---~-----------~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 74 VHNFMK-SYGVNFPVV--LDTDRQVLD---A-----------YDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp HHHHHH-HHTCCSCEE--EETTSHHHH---H-----------TTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHH-HcCCCceEE--ECCchHHHH---h-----------cCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 999997 789999998 454322111 1 34555569999999999999999988999999999999
Q ss_pred hcC
Q 030881 167 LGL 169 (170)
Q Consensus 167 l~~ 169 (170)
++.
T Consensus 137 l~~ 139 (151)
T 2f9s_A 137 KPG 139 (151)
T ss_dssp SCC
T ss_pred Hhh
Confidence 864
No 24
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.97 E-value=7.2e-30 Score=177.35 Aligned_cols=154 Identities=18% Similarity=0.278 Sum_probs=122.6
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCC-CChhhHHHHHHHHHHhccCC--cEEEEeecCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCG-MTNSNYIELSQLYDKYKDQG--LEILAFPCNQFGEEE 80 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~-~C~~~~~~l~~~~~~~~~~~--v~~v~is~d~~~~~~ 80 (170)
..+..|.++|+|++.+.+|+.+++++++||++||+||++||+ +|+.+++.|+++++++++++ +.+|+|++|. +
T Consensus 5 ~~l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~----~ 80 (174)
T 1xzo_A 5 IKDPLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDP----E 80 (174)
T ss_dssp CCSCCCEECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCT----T
T ss_pred CcCccccccCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCC----C
Confidence 347789999999999999999999999999999999999999 99999999999999999876 9999999973 2
Q ss_pred CCChHHHHHHHHhhcCCCC---CceEEeecCCCCchhHHHHhHh-------ccCCccCCccccCceeEEECCCCcEEEEe
Q 030881 81 PGSNDQIADFVCTRFKSEF---PIFEKIDVNGEHASPLYKLLKS-------GKWGIFGDDIQWNFAKFLVDKNGQVVDRY 150 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~---p~~~~~d~~~~~~~~~~~~~~~-------~~~~~~~~~i~~~p~~~lid~~G~i~~~~ 150 (170)
.++.+.+++|++ +++.+| |++ .|...... ..+... ..++. +.+.+.|++||||++|+|++++
T Consensus 81 ~d~~~~~~~~~~-~~~~~~~~~~~l--~d~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~p~~~lid~~G~i~~~~ 152 (174)
T 1xzo_A 81 NDKPKQLKKFAA-NYPLSFDNWDFL--TGYSQSEI---EEFALKSFKAIVKKPEGE--DQVIHQSSFYLVGPDGKVLKDY 152 (174)
T ss_dssp TCCHHHHHHHHT-TSCCCGGGEEEE--BCSCHHHH---HHHHHHHHCCCCCCCSSC--CSCCSCCEEEEECTTSEEEEEE
T ss_pred CCCHHHHHHHHH-HcCCCCcceEEE--eCCCHHHH---HHHHHhhcCeeEeecCCC--CeeeeeeEEEEECCCCeEEEEE
Confidence 357889999997 889988 545 33222111 112110 01111 3456677999999999999998
Q ss_pred CCCC--CchHHHHHHHHHhcC
Q 030881 151 YPTT--SLLSLEHDIKKLLGL 169 (170)
Q Consensus 151 ~~~~--~~~~l~~~l~~~l~~ 169 (170)
.|.. +.+++.+.|++++++
T Consensus 153 ~g~~~~~~~~l~~~l~~ll~~ 173 (174)
T 1xzo_A 153 NGVENTPYDDIISDVKSASTL 173 (174)
T ss_dssp ESSSSCCHHHHHHHHHHHTCC
T ss_pred cCCCCCCHHHHHHHHHHHHhc
Confidence 8865 468899999999875
No 25
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.97 E-value=5.7e-30 Score=176.38 Aligned_cols=151 Identities=15% Similarity=0.183 Sum_probs=114.6
Q ss_pred ccccCCcccccce--eeCCCCCeecCCCCCCcEEEEEEec-CCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCC
Q 030881 4 QFIQNPESIFDLS--VKDARGHEVDLSTYKGKVLLIVNVA-SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (170)
Q Consensus 4 ~~~~~g~~~p~f~--l~~~~g~~~~l~~~~gk~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~ 80 (170)
..+..|+++|+|+ +.+.+|+++++++++||++||+||+ +||++|+.+++.|++++++++++|+.+++|+.|
T Consensus 5 ~~l~~G~~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d------ 78 (163)
T 3gkn_A 5 TDAVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD------ 78 (163)
T ss_dssp CCCCCCCCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS------
T ss_pred cccccCCcCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC------
Confidence 3478999999999 9999999999999999999999997 999999999999999999999999999999986
Q ss_pred CCChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccC-CccccCceeEEECCCCcEEEEeCCCCCc---
Q 030881 81 PGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFG-DDIQWNFAKFLVDKNGQVVDRYYPTTSL--- 156 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~i~~~p~~~lid~~G~i~~~~~~~~~~--- 156 (170)
+.+.+++|++ +++.+||++ .|..+.... .|......+..| ....+.|++||||++|+|++.+.+....
T Consensus 79 --~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~---~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~ 150 (163)
T 3gkn_A 79 --SVKSHDNFCA-KQGFAFPLV--SDGDEALCR---AFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHA 150 (163)
T ss_dssp --CHHHHHHHHH-HHCCSSCEE--ECTTCHHHH---HTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHH
T ss_pred --CHHHHHHHHH-HhCCCceEE--ECCcHHHHH---HhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCH
Confidence 7899999997 789999999 554432221 111111000000 0000155999999999999998654433
Q ss_pred hHHHHHHHHHhc
Q 030881 157 LSLEHDIKKLLG 168 (170)
Q Consensus 157 ~~l~~~l~~~l~ 168 (170)
+++.+.|+++.+
T Consensus 151 ~~il~~l~~l~~ 162 (163)
T 3gkn_A 151 DAVLAALKAHAK 162 (163)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhc
Confidence 335555555543
No 26
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.97 E-value=3.3e-30 Score=177.48 Aligned_cols=129 Identities=16% Similarity=0.200 Sum_probs=106.5
Q ss_pred ccCCcccccceeeCCCCCeecCCCCCCcE-EEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 6 IQNPESIFDLSVKDARGHEVDLSTYKGKV-LLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~~gk~-~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
+..|+++|+|++.+.+|+.+++++++||+ +||+|| ++||++|+.+++.|++++++++++|+.+++|+.| +
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d--------~ 73 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSD--------D 73 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC--------C
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC--------C
Confidence 67899999999999999999999999997 999999 9999999999999999999999999999999986 6
Q ss_pred hHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCC
Q 030881 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTS 155 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~ 155 (170)
.+.+++|++ +++++||++ .|....... .|.... ..-+.|++||||++|+|++.+.|...
T Consensus 74 ~~~~~~~~~-~~~~~~~~~--~d~~~~~~~---~~~v~~-------~~~~~P~~~lid~~G~i~~~~~g~~~ 132 (161)
T 3drn_A 74 INSHKRFKE-KYKLPFILV--SDPDKKIRE---LYGAKG-------FILPARITFVIDKKGIIRHIYNSQMN 132 (161)
T ss_dssp HHHHHHHHH-HTTCCSEEE--ECTTSHHHH---HTTCCC-------SSSCCCEEEEECTTSBEEEEEECSSC
T ss_pred HHHHHHHHH-HhCCCceEE--ECCcHHHHH---HcCCCC-------cCcccceEEEECCCCEEEEEEecCCC
Confidence 889999997 889999998 453322211 111111 01114599999999999999888433
No 27
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.96 E-value=1.8e-29 Score=170.12 Aligned_cols=135 Identities=15% Similarity=0.102 Sum_probs=110.4
Q ss_pred cccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHH---HHHHhccCCcEEEEeecCCCCCCCC
Q 030881 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQ---LYDKYKDQGLEILAFPCNQFGEEEP 81 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~---~~~~~~~~~v~~v~is~d~~~~~~~ 81 (170)
....|.++|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|++ +++++++.++.+++|+.|.
T Consensus 4 ~~~~G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~------ 77 (142)
T 3eur_A 4 KNRLGTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDE------ 77 (142)
T ss_dssp TTCTTSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSS------
T ss_pred hhcCCCccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCC------
Confidence 3678999999999999999999999999999999999999999999999999 9999998899999999973
Q ss_pred CChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHH
Q 030881 82 GSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEH 161 (170)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~ 161 (170)
+.+.++++++ +++.+|+.+ .|..+.. . .... +++...|++||||++|+|+++..+ .+++++
T Consensus 78 -~~~~~~~~~~-~~~~~~~~~--~d~~~~~-----~--~~~~-----~~v~~~P~~~lid~~G~i~~~~~~---~~~l~~ 138 (142)
T 3eur_A 78 -ELDEWKKHRN-DFAKEWTNG--YDKELVI-----K--NKNL-----YDLRAIPTLYLLDKNKTVLLKDAT---LQKVEQ 138 (142)
T ss_dssp -CHHHHHHHGG-GSCTTSEEE--ECTTCHH-----H--HTTC-----SCCTTCSEEEEECTTCBEEEEEEC---HHHHHH
T ss_pred -CHHHHHHHHH-hcccccccc--cCccchh-----h--hhhh-----cCCCcCCeEEEECCCCcEEecCCC---HHHHHH
Confidence 6788889987 778888876 5543320 0 0011 345555699999999999999653 556666
Q ss_pred HHH
Q 030881 162 DIK 164 (170)
Q Consensus 162 ~l~ 164 (170)
.|+
T Consensus 139 ~l~ 141 (142)
T 3eur_A 139 YLA 141 (142)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 28
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.96 E-value=1.1e-28 Score=169.78 Aligned_cols=147 Identities=16% Similarity=0.203 Sum_probs=122.3
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
..+..|.++|+|++.+.+|+.+++++++||++||+||++||++|..+++.|++++++++++++.+++|++|. +
T Consensus 6 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~-------~ 78 (165)
T 3or5_A 6 QADARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNE-------Q 78 (165)
T ss_dssp -CCCCCCBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSC-------C
T ss_pred hhhcCCCCCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC-------C
Confidence 457899999999999999999999999999999999999999999999999999999999899999999873 6
Q ss_pred hHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHH
Q 030881 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 163 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l 163 (170)
.+.+.+|++ +++++||++. +.. .....|. .... .++...|++||||++|+|++.+.|..+.+++.+.|
T Consensus 79 ~~~~~~~~~-~~~~~~~~~~--~~~----~~~~~~~-~~~~----~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 146 (165)
T 3or5_A 79 LPNVKNYMK-TQGIIYPVMM--ATP----ELIRAFN-GYID----GGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIV 146 (165)
T ss_dssp HHHHHHHHH-HHTCCSCEEE--CCH----HHHHHHH-TTST----TCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHH
T ss_pred HHHHHHHHH-HcCCCCceEe--cCH----HHHHHHh-hhhc----cCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHH
Confidence 888999997 7899999883 322 1111111 1000 13555569999999999999999999999999999
Q ss_pred HHHhcC
Q 030881 164 KKLLGL 169 (170)
Q Consensus 164 ~~~l~~ 169 (170)
+++|++
T Consensus 147 ~~~l~~ 152 (165)
T 3or5_A 147 KMALGA 152 (165)
T ss_dssp HHHHC-
T ss_pred HHHHhh
Confidence 999864
No 29
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.96 E-value=7e-29 Score=167.69 Aligned_cols=142 Identities=18% Similarity=0.227 Sum_probs=117.6
Q ss_pred ccccCCcccccceeeCCCCCeecCC--CCCCcEEEEEEecCCCCCChhhHHHHHHHHHHh-ccCCcEEEEeecCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLS--TYKGKVLLIVNVASKCGMTNSNYIELSQLYDKY-KDQGLEILAFPCNQFGEEE 80 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~--~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~-~~~~v~~v~is~d~~~~~~ 80 (170)
..+..|.++|+|++.+.+|+.++++ +++||++||+||++||++|+.+++.++++++++ +++++.+++|++|.
T Consensus 3 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~----- 77 (148)
T 3fkf_A 3 AKVTVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDI----- 77 (148)
T ss_dssp --CCTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCS-----
T ss_pred ccccCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCC-----
Confidence 4578999999999999999999999 999999999999999999999999999999999 88889999999974
Q ss_pred CCChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHH
Q 030881 81 PGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLE 160 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~ 160 (170)
+.+.+.++.+ +++.+||++ .+..+........ +++.+.|++++||++|+|++.+. +.+++.
T Consensus 78 --~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~~~~-----------~~v~~~P~~~lid~~G~i~~~~~---~~~~l~ 138 (148)
T 3fkf_A 78 --DREAWETAIK-KDTLSWDQV--CDFTGLSSETAKQ-----------YAILTLPTNILLSPTGKILARDI---QGEALT 138 (148)
T ss_dssp --CHHHHHHHHH-HTTCCSEEE--CCSCGGGCHHHHH-----------TTCCSSSEEEEECTTSBEEEESC---CHHHHH
T ss_pred --CHHHHHHHHH-HcCCCceEE--EccCCcchHHHHh-----------cCCCCcCEEEEECCCCeEEEecC---CHHHHH
Confidence 6789999997 889999988 4543222221112 34555669999999999999964 788899
Q ss_pred HHHHHHhcC
Q 030881 161 HDIKKLLGL 169 (170)
Q Consensus 161 ~~l~~~l~~ 169 (170)
+.|+++|++
T Consensus 139 ~~l~~ll~~ 147 (148)
T 3fkf_A 139 GKLKELLKT 147 (148)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHcc
Confidence 999998864
No 30
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.96 E-value=2.7e-29 Score=169.74 Aligned_cols=143 Identities=16% Similarity=0.165 Sum_probs=117.6
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
..+..|.++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|. +
T Consensus 3 ~~~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~ 75 (148)
T 3hcz_A 3 APLLLGKKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIER-------K 75 (148)
T ss_dssp CCCCTTSBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCS-------S
T ss_pred CccCCCCcCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecC-------C
Confidence 457899999999999999999999999999999999999999999999999999999999899999999973 6
Q ss_pred hHHHHHHHHhhcCCC-CCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHH
Q 030881 84 NDQIADFVCTRFKSE-FPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHD 162 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~-~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~ 162 (170)
.++++++.+ +++.+ ||++ .|..+... -...| ++...|+++|||++|+|++++.|..+.+++.+.
T Consensus 76 ~~~~~~~~~-~~~~~~~~~~--~d~~~~~~-~~~~~-----------~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~ 140 (148)
T 3hcz_A 76 DEEWLKFIR-SKKIGGWLNV--RDSKNHTD-FKITY-----------DIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQ 140 (148)
T ss_dssp SHHHHHHHH-HHTCTTSEEE--ECTTCCCC-HHHHH-----------CCCSSCEEEEECTTCBEEEESCCGGGHHHHHHH
T ss_pred HHHHHHHHH-HcCCCCceEE--eccccchh-HHHhc-----------CcCCCCEEEEECCCCcEEEecCCHHHHHHHHHH
Confidence 779999997 77888 8888 56554311 11122 344455999999999999998877666666666
Q ss_pred HHHHhc
Q 030881 163 IKKLLG 168 (170)
Q Consensus 163 l~~~l~ 168 (170)
|.++++
T Consensus 141 l~~~l~ 146 (148)
T 3hcz_A 141 YEKSLK 146 (148)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 666554
No 31
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.96 E-value=2.6e-29 Score=171.01 Aligned_cols=141 Identities=18% Similarity=0.249 Sum_probs=120.0
Q ss_pred ccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChH
Q 030881 6 IQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~ 85 (170)
...|.++|+|++.+.+|+.+++++++||++||+||++||++|..+++.|++++++++++++.+++|+.+. ++.+
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~------~~~~ 75 (153)
T 2l5o_A 2 SLDSKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPI------DPIE 75 (153)
T ss_dssp --CCTTCCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTT------SCHH
T ss_pred CCCCCCCCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCC------CCHH
Confidence 4579999999999999999999999999999999999999999999999999999998899999999762 5788
Q ss_pred HHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHH
Q 030881 86 QIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKK 165 (170)
Q Consensus 86 ~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~ 165 (170)
.+++|++ +++.+||++ .|...... .. +++...|++|+||++|+|++.+.|..+.+++.+.|++
T Consensus 76 ~~~~~~~-~~~~~~~~~--~d~~~~~~---~~-----------~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 138 (153)
T 2l5o_A 76 SVRQYVK-DYGLPFTVM--YDADKAVG---QA-----------FGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDT 138 (153)
T ss_dssp HHHHHHH-HTTCCSEEE--ECSSCHHH---HH-----------HTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHH-HcCCCceEE--cCchHHHH---HH-----------cCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 9999997 889999987 44332211 11 2344455999999999999999998899999999999
Q ss_pred HhcC
Q 030881 166 LLGL 169 (170)
Q Consensus 166 ~l~~ 169 (170)
+|+.
T Consensus 139 ll~~ 142 (153)
T 2l5o_A 139 AWRN 142 (153)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9864
No 32
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.96 E-value=3.4e-29 Score=176.28 Aligned_cols=148 Identities=20% Similarity=0.276 Sum_probs=121.7
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
..+..|.++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++ +.+++|++|.......++
T Consensus 5 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~ 83 (188)
T 2cvb_A 5 PELPLESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDA 83 (188)
T ss_dssp CCCCTTCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGS
T ss_pred CcCCCCCCCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccC
Confidence 5578999999999999999999999999999999999999999999999999999999988 999999997544333468
Q ss_pred hHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeC--------CCCC
Q 030881 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY--------PTTS 155 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~--------~~~~ 155 (170)
.+.+++|++ +++.+||++ .|..+.... . +++...|++||||++|+|+++.. |..+
T Consensus 84 ~~~~~~~~~-~~~~~~~~~--~d~~~~~~~---~-----------~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~ 146 (188)
T 2cvb_A 84 PEKMAAFAE-EHGIFFPYL--LDETQEVAK---A-----------YRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQ 146 (188)
T ss_dssp HHHHHHHHH-HHTCCSCEE--ECSSSHHHH---H-----------TTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCC
T ss_pred HHHHHHHHH-HhCCCceEE--ECCcchHHH---H-----------cCCCCCCeEEEECCCCcEEEEEecCCccccccccC
Confidence 899999997 789999988 454332211 1 23444459999999999999821 2236
Q ss_pred chHHHHHHHHHhcC
Q 030881 156 LLSLEHDIKKLLGL 169 (170)
Q Consensus 156 ~~~l~~~l~~~l~~ 169 (170)
.+++.+.|++++++
T Consensus 147 ~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 147 SHDLEAAIEALLRG 160 (188)
T ss_dssp CCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC
Confidence 78899999999864
No 33
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.96 E-value=1.6e-29 Score=178.97 Aligned_cols=149 Identities=17% Similarity=0.217 Sum_probs=123.6
Q ss_pred ccccCCcccccceee-CCCCCeecCCCCCCc-EEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVK-DARGHEVDLSTYKGK-VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEP 81 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~-~~~g~~~~l~~~~gk-~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~ 81 (170)
..+..|.++|+|++. +.+|+.+++++++|| ++||+||++||++|+.+++.|++++++++++++.+++|++|.......
T Consensus 16 ~~~~~g~~~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~ 95 (196)
T 2ywi_A 16 NMFPLGKQAPPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPE 95 (196)
T ss_dssp CCCCTTCBCCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGG
T ss_pred cCCCcCCcCCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccc
Confidence 346789999999999 999999999999998 599999999999999999999999999998899999999986443334
Q ss_pred CChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEE---------eCC
Q 030881 82 GSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDR---------YYP 152 (170)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~---------~~~ 152 (170)
++.+.+++|++ +++.+||++ .|..+.... .| ++...|++||||++|+|+++ +.|
T Consensus 96 d~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~---~~-----------~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g 158 (196)
T 2ywi_A 96 DSPENMKKVAE-ELGYPFPYL--YDETQEVAK---AY-----------DAACTPDFYIFDRDLKCVYRGQLDDSRPNNGI 158 (196)
T ss_dssp GSHHHHHHHHH-HHTCCSCEE--ECSSCHHHH---HH-----------TCCEESEEEEEETTCBEEEEECSSSCCTTTCC
T ss_pred cCHHHHHHHHH-HcCCCceEE--ECCchHHHH---Hh-----------CCCCCCeEEEEcCCCeEEEccccCcccccccC
Confidence 68899999997 789999988 454332221 22 23344599999999999998 346
Q ss_pred CCCchHHHHHHHHHhcC
Q 030881 153 TTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 153 ~~~~~~l~~~l~~~l~~ 169 (170)
..+.+++.+.|++++++
T Consensus 159 ~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 159 PVTGESIRAALDALLEG 175 (196)
T ss_dssp CCCCHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHcC
Confidence 66888999999998853
No 34
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.96 E-value=5.9e-29 Score=169.43 Aligned_cols=140 Identities=18% Similarity=0.221 Sum_probs=115.8
Q ss_pred ccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChH
Q 030881 6 IQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~ 85 (170)
+..|.++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|++|. +.+
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~-------~~~ 75 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDR-------REE 75 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCS-------CHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccC-------CHH
Confidence 5789999999999999999999999999999999999999999999999999999998899999999973 678
Q ss_pred HHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHH
Q 030881 86 QIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKK 165 (170)
Q Consensus 86 ~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~ 165 (170)
.++++++ +++.+||++ .|..... ..+.. . +++...|++||||++|+|++++ .+.+++.+.|++
T Consensus 76 ~~~~~~~-~~~~~~~~~--~d~~~~~-~~~~~-----~-----~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ 138 (152)
T 2lrn_A 76 DWKKAIE-EDKSYWNQV--LLQKDDV-KDVLE-----S-----YCIVGFPHIILVDPEGKIVAKE---LRGDDLYNTVEK 138 (152)
T ss_dssp HHHHHHH-HHTCCSEEE--EECHHHH-HHHHH-----H-----TTCCSSCEEEEECTTSEEEEEC---CCTTHHHHHHHH
T ss_pred HHHHHHH-HhCCCCeEE--ecccchh-HHHHH-----H-----hCCCcCCeEEEECCCCeEEEee---CCHHHHHHHHHH
Confidence 8999997 779999988 4431100 11111 0 2344556999999999999996 356789999998
Q ss_pred HhcC
Q 030881 166 LLGL 169 (170)
Q Consensus 166 ~l~~ 169 (170)
++++
T Consensus 139 l~~~ 142 (152)
T 2lrn_A 139 FVNG 142 (152)
T ss_dssp HHTS
T ss_pred HHhh
Confidence 8764
No 35
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.96 E-value=3.2e-29 Score=172.41 Aligned_cols=151 Identities=15% Similarity=0.153 Sum_probs=116.8
Q ss_pred ccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCC-ChhhHHHHHHHHHHhcc----CCcEEEEeecCCCCCCCCCChH
Q 030881 11 SIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGM-TNSNYIELSQLYDKYKD----QGLEILAFPCNQFGEEEPGSND 85 (170)
Q Consensus 11 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~-C~~~~~~l~~~~~~~~~----~~v~~v~is~d~~~~~~~~~~~ 85 (170)
.+|+|++.|.+|+.+++++++||++||+||++||++ |+.+++.|+++++++++ .++.+++|++|. ..++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~----~~d~~~ 77 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDP----ERDTKE 77 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCT----TTCCHH
T ss_pred CCCCeEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCC----CCCCHH
Confidence 579999999999999999999999999999999998 99999999999999986 479999999974 345788
Q ss_pred HHHHHHHhhcCCCCCceEEeecCCCCchhHH-HHhHhccCC----ccCCccccCceeEEECCCCcEEEEeCCCCCchHHH
Q 030881 86 QIADFVCTRFKSEFPIFEKIDVNGEHASPLY-KLLKSGKWG----IFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLE 160 (170)
Q Consensus 86 ~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~-~~~~~~~~~----~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~ 160 (170)
.+++|++ +++.+||++. ..... ...+. .|.....|. ...+.+.|++++||||++|+|++.+.|..+++++.
T Consensus 78 ~~~~~~~-~~~~~~~~l~--~~~d~-~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~ 153 (164)
T 2ggt_A 78 AIANYVK-EFSPKLVGLT--GTREE-VDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIA 153 (164)
T ss_dssp HHHHHHH-TTCSSCEEEE--CCHHH-HHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHH
T ss_pred HHHHHHH-HcCCCeEEEe--CCHHH-HHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHH
Confidence 9999997 8899998773 11000 00010 111111120 00012345668999999999999999988999999
Q ss_pred HHHHHHhcC
Q 030881 161 HDIKKLLGL 169 (170)
Q Consensus 161 ~~l~~~l~~ 169 (170)
+.|+++|++
T Consensus 154 ~~l~~ll~~ 162 (164)
T 2ggt_A 154 ASIATHMRP 162 (164)
T ss_dssp HHHHHHHGG
T ss_pred HHHHHHHHh
Confidence 999999864
No 36
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.96 E-value=1.9e-28 Score=166.51 Aligned_cols=138 Identities=23% Similarity=0.369 Sum_probs=117.6
Q ss_pred ccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChH
Q 030881 6 IQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~ 85 (170)
+..|.++|+|++.+ +|..+++++++||++||+||++||++|..+++.|++++++++++++.+++|++|. +.+
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~~~ 74 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDA-------KTG 74 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCS-------SHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCC-------CHH
Confidence 57899999999999 9999999999999999999999999999999999999999999999999999873 678
Q ss_pred HHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCc--hHHHHHH
Q 030881 86 QIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSL--LSLEHDI 163 (170)
Q Consensus 86 ~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~--~~l~~~l 163 (170)
++.++.+ +++.+||++ .|....... . +++...|++||||++|+|++.+.|.... +++.+.|
T Consensus 75 ~~~~~~~-~~~~~~~~~--~d~~~~~~~---~-----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i 137 (152)
T 3gl3_A 75 DAMKFLA-QVPAEFTVA--FDPKGQTPR---L-----------YGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQI 137 (152)
T ss_dssp HHHHHHH-HSCCCSEEE--ECTTCHHHH---H-----------TTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHH
T ss_pred HHHHHHH-HcCCCCcee--ECCcchhHH---H-----------cCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHH
Confidence 8899997 889999988 554432111 1 2344555999999999999998886544 6799999
Q ss_pred HHHhc
Q 030881 164 KKLLG 168 (170)
Q Consensus 164 ~~~l~ 168 (170)
++++.
T Consensus 138 ~~~~~ 142 (152)
T 3gl3_A 138 LAALG 142 (152)
T ss_dssp HHHTC
T ss_pred HHHHc
Confidence 88875
No 37
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.96 E-value=3.9e-29 Score=175.08 Aligned_cols=150 Identities=12% Similarity=0.186 Sum_probs=114.1
Q ss_pred ccccCCcc----cccceeeCCCCCeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCC
Q 030881 4 QFIQNPES----IFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGE 78 (170)
Q Consensus 4 ~~~~~g~~----~p~f~l~~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~ 78 (170)
..+..|+. +|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|++++++|+++|+.+++|+.|
T Consensus 19 ~~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D---- 94 (179)
T 3ixr_A 19 SHMNIGDTLNHSLLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD---- 94 (179)
T ss_dssp CSSCTTCBCCHHHHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC----
T ss_pred cccCcCcccCCcCCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC----
Confidence 45678888 99999999999999999999999999999 8999999999999999999999999999999986
Q ss_pred CCCCChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccC-CccccCceeEEECCCCcEEEEeCCCCCc-
Q 030881 79 EEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFG-DDIQWNFAKFLVDKNGQVVDRYYPTTSL- 156 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~i~~~p~~~lid~~G~i~~~~~~~~~~- 156 (170)
+.+.+++|++ +++++||++ .|..+.... .|.....+...| ....+.|++||||++|+|++.+.+....
T Consensus 95 ----~~~~~~~~~~-~~~~~f~~l--~D~~~~~~~---~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~ 164 (179)
T 3ixr_A 95 ----SVKSHDSFCA-KQGFTFPLV--SDSDAILCK---AFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPG 164 (179)
T ss_dssp ----CHHHHHHHHH-HHTCCSCEE--ECTTCHHHH---HTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTT
T ss_pred ----CHHHHHHHHH-HcCCceEEE--ECCchHHHH---HcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCC
Confidence 6788999997 789999999 554443221 121111111111 0111256999999999999998654333
Q ss_pred --hHHHHHHHHHh
Q 030881 157 --LSLEHDIKKLL 167 (170)
Q Consensus 157 --~~l~~~l~~~l 167 (170)
+++.+.|+++.
T Consensus 165 ~~~~il~~l~~l~ 177 (179)
T 3ixr_A 165 HAEEVLNKLKAHA 177 (179)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 34555555544
No 38
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.96 E-value=1.7e-28 Score=172.40 Aligned_cols=146 Identities=20% Similarity=0.213 Sum_probs=118.0
Q ss_pred cccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCCh
Q 030881 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~ 84 (170)
.+..|.++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|+++++++++.++.+++|++|. ++.
T Consensus 33 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~------~~~ 106 (186)
T 1jfu_A 33 MASAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDT------RDP 106 (186)
T ss_dssp ECCSCCBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCC------SCT
T ss_pred cccCCCcCCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCC------CCH
Confidence 45689999999999999999999999999999999999999999999999999999998889999999973 345
Q ss_pred HHHHHHHHhhcCC-CCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCC--chHHHH
Q 030881 85 DQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTS--LLSLEH 161 (170)
Q Consensus 85 ~~~~~~~~~~~~~-~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~--~~~l~~ 161 (170)
+.+++|++ +++. +||++ .|..+.... .+... ..+...|++||||++|+|++++.|..+ .+++.+
T Consensus 107 ~~~~~~~~-~~~~~~~~~~--~d~~~~~~~---~~~~~-------~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~ 173 (186)
T 1jfu_A 107 EKPKTFLK-EANLTRLGYF--NDQKAKVFQ---DLKAI-------GRALGMPTSVLVDPQGCEIATIAGPAEWASEDALK 173 (186)
T ss_dssp THHHHHHH-HTTCCTTCCE--ECTTCHHHH---HHHTT-------TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHH
T ss_pred HHHHHHHH-HcCCCCCceE--ECCcchHHH---Hhccc-------cccCCCCEEEEECCCCCEEEEEecCCccCHHHHHH
Confidence 78888987 7788 59988 554432211 11111 011123499999999999999888664 678999
Q ss_pred HHHHHhcC
Q 030881 162 DIKKLLGL 169 (170)
Q Consensus 162 ~l~~~l~~ 169 (170)
.|++++++
T Consensus 174 ~l~~ll~~ 181 (186)
T 1jfu_A 174 LIRAATGK 181 (186)
T ss_dssp HHHHHHC-
T ss_pred HHHHHhcc
Confidence 99999864
No 39
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.96 E-value=1.2e-28 Score=178.04 Aligned_cols=143 Identities=15% Similarity=0.187 Sum_probs=112.0
Q ss_pred cccCCcccccceeeCC--CC--CeecCCCC-CCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCC
Q 030881 5 FIQNPESIFDLSVKDA--RG--HEVDLSTY-KGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGE 78 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~--~g--~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~ 78 (170)
.+..|+++|+|++.+. +| +.++++++ +||++||+|| ++||++|+.+++.|++++++|+++++++|+|++|
T Consensus 24 ~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D---- 99 (221)
T 2c0d_A 24 LSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVD---- 99 (221)
T ss_dssp --CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESS----
T ss_pred cCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCC----
Confidence 3678999999999998 99 99999999 9999999999 9999999999999999999999889999999986
Q ss_pred CCCCChHHHHHHHHhhc-------CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeC
Q 030881 79 EEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY 151 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~ 151 (170)
+.+.+++|++ ++ +.+||++ .|..+.... .|... . ..| ...|++||||++|+|++.+.
T Consensus 100 ----~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~~~~---~ygv~-~--~~g---~~~P~~~lID~~G~I~~~~~ 163 (221)
T 2c0d_A 100 ----SVYSHLAWKN-MPIEKGGIGNVEFTLV--SDINKDISK---NYNVL-Y--DNS---FALRGLFIIDKNGCVRHQTV 163 (221)
T ss_dssp ----CHHHHHHHHH-SCGGGTCCCSCSSEEE--ECTTSHHHH---HTTCE-E--TTT---EECEEEEEECTTSBEEEEEE
T ss_pred ----CHHHHHHHHH-HhhhhcCccCCceEEE--ECCchHHHH---HcCCc-c--cCC---CccceEEEECCCCeEEEEEe
Confidence 6778888987 66 6789988 554332211 11110 0 001 13459999999999999976
Q ss_pred CC----CCchHHHHHHHHHh
Q 030881 152 PT----TSLLSLEHDIKKLL 167 (170)
Q Consensus 152 ~~----~~~~~l~~~l~~~l 167 (170)
+. .+.+++.+.|+++.
T Consensus 164 g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 164 NDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp ECTTCCCCHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHh
Confidence 53 34567888887765
No 40
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.96 E-value=2.9e-28 Score=171.55 Aligned_cols=144 Identities=13% Similarity=0.107 Sum_probs=114.3
Q ss_pred ccCCcccccceeeCCCCC----eecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCC
Q 030881 6 IQNPESIFDLSVKDARGH----EVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~~g~----~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~ 80 (170)
+..|+++|+|++.+.+|. .+++++++||++||+|| ++||++|+.+++.|++++++++++++.+++|++|
T Consensus 1 ~~~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d------ 74 (187)
T 1we0_A 1 SLIGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTD------ 74 (187)
T ss_dssp CCTTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESS------
T ss_pred CCCCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECC------
Confidence 357999999999999999 99999999999999999 9999999999999999999999889999999986
Q ss_pred CCChHHHHHHHHhhc----CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCC--
Q 030881 81 PGSNDQIADFVCTRF----KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT-- 154 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~----~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~-- 154 (170)
+.+.+++|.+ ++ +.+||++ .|....... .|..... ..|. +.|++||||++|+|++.+.|..
T Consensus 75 --~~~~~~~~~~-~~~~~~~~~~~~~--~d~~~~~~~---~~~v~~~--~~g~---~~P~~~lid~~G~i~~~~~g~~~~ 141 (187)
T 1we0_A 75 --THFVHKAWHE-NSPAVGSIEYIMI--GDPSQTISR---QFDVLNE--ETGL---ADRGTFIIDPDGVIQAIEINADGI 141 (187)
T ss_dssp --CHHHHHHHHH-SCHHHHTCCSEEE--ECTTCHHHH---HTTCEET--TTTE---ECEEEEEECTTSBEEEEEEECTTS
T ss_pred --CHHHHHHHHH-HhccccCCCceEE--ECCchHHHH---HhCCCcC--CCCc---eeeEEEEECCCCeEEEEEecCCCC
Confidence 5678888886 66 7889988 454322111 1111100 0001 4459999999999999987754
Q ss_pred --CchHHHHHHHHHhc
Q 030881 155 --SLLSLEHDIKKLLG 168 (170)
Q Consensus 155 --~~~~l~~~l~~~l~ 168 (170)
+.+++.+.|++++.
T Consensus 142 ~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 142 GRDASTLINKVKAAQY 157 (187)
T ss_dssp CCCTTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhh
Confidence 57788888887763
No 41
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.96 E-value=5.8e-28 Score=167.82 Aligned_cols=156 Identities=16% Similarity=0.239 Sum_probs=118.9
Q ss_pred cCCcccc-cceeeCCCCCeecCCCCCCcEEEEEEecCCCC-CChhhHHHHHHHHHHhcc--CCcEEEEeecCCCCCCCCC
Q 030881 7 QNPESIF-DLSVKDARGHEVDLSTYKGKVLLIVNVASKCG-MTNSNYIELSQLYDKYKD--QGLEILAFPCNQFGEEEPG 82 (170)
Q Consensus 7 ~~g~~~p-~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~-~C~~~~~~l~~~~~~~~~--~~v~~v~is~d~~~~~~~~ 82 (170)
..|.++| +|+|.|.+|+.+++++++||++||+||++||+ +|..+++.|+++++++++ .++++|+|++|. .+
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~-----~d 76 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDP-----KD 76 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCT-----TC
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCC-----CC
Confidence 5799999 99999999999999999999999999999998 599999999999999975 459999999983 36
Q ss_pred ChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHh-ccCCc-cCCccccCceeEEECCCCcEEEEeCCC-CCchHH
Q 030881 83 SNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKS-GKWGI-FGDDIQWNFAKFLVDKNGQVVDRYYPT-TSLLSL 159 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~-~~~~~-~~~~i~~~p~~~lid~~G~i~~~~~~~-~~~~~l 159 (170)
+.+.+++|++ +++..++.+...- .+. .......... ...-. .++.+.+.|++||||++|+|++.+.|. .+++++
T Consensus 77 ~~~~~~~~~~-~~~~~~~~w~~l~-~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i 153 (170)
T 3me7_A 77 TLEDIKRFQK-EYGIDGKGWKVVK-AKT-SEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEF 153 (170)
T ss_dssp CHHHHHHHHH-HTTCCSSSEEEEE-ESS-HHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHH
T ss_pred CHHHHHHHHH-HcCCCCCCeEEEe-CCC-HHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHH
Confidence 8999999997 8898877431110 001 0111111111 00000 113566778999999999999987775 578889
Q ss_pred HHHHHHHhcCC
Q 030881 160 EHDIKKLLGLS 170 (170)
Q Consensus 160 ~~~l~~~l~~~ 170 (170)
.+.|+++++++
T Consensus 154 ~~~l~~~~~~~ 164 (170)
T 3me7_A 154 VNALRLARGEG 164 (170)
T ss_dssp HHHHHHHTTCS
T ss_pred HHHHHHhhccc
Confidence 99999988653
No 42
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.96 E-value=1.4e-28 Score=167.51 Aligned_cols=140 Identities=14% Similarity=0.249 Sum_probs=116.3
Q ss_pred ccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChH
Q 030881 6 IQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND 85 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~ 85 (170)
...|.++|+|++.+.+|+.+++++++||++||+||++||++|..+++.|+++++++++.++.+++|++|. ++.+
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~------~~~~ 75 (154)
T 3kcm_A 2 SLEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDE------GGKV 75 (154)
T ss_dssp -CTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCT------THHH
T ss_pred CCCCCCCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCC------cchH
Confidence 4689999999999999999999999999999999999999999999999999999998889999999873 3478
Q ss_pred HHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCC--CchHHHHHH
Q 030881 86 QIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT--SLLSLEHDI 163 (170)
Q Consensus 86 ~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~--~~~~l~~~l 163 (170)
.+++|++ +++.+||++ .|....... .| ++...|++||||++|+|++++.|.. +.+++.+.|
T Consensus 76 ~~~~~~~-~~~~~~~~~--~d~~~~~~~---~~-----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l 138 (154)
T 3kcm_A 76 AVEEFFR-KTGFTLPVL--LDADKRVGK---LY-----------GTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFL 138 (154)
T ss_dssp HHHHHHH-HHCCCCCEE--ECTTCHHHH---HH-----------TCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHH
T ss_pred HHHHHHH-HcCCCeeEE--ecCchHHHH---Hh-----------CCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHH
Confidence 8899997 779999988 554332211 22 2334459999999999999988875 566899999
Q ss_pred HHHhc
Q 030881 164 KKLLG 168 (170)
Q Consensus 164 ~~~l~ 168 (170)
+++..
T Consensus 139 ~~l~~ 143 (154)
T 3kcm_A 139 NNELS 143 (154)
T ss_dssp HTC--
T ss_pred HHHHH
Confidence 88764
No 43
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.96 E-value=1.4e-28 Score=167.37 Aligned_cols=138 Identities=14% Similarity=0.152 Sum_probs=110.5
Q ss_pred ccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHH
Q 030881 11 SIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADF 90 (170)
Q Consensus 11 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~ 90 (170)
++|+|.+. .+|+.+++++++||++||+||++||++|+.++|.|+++++++++.++.+++|++| +.+.+.+|
T Consensus 4 pa~~~~~~-~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d--------~~~~~~~~ 74 (151)
T 3raz_A 4 SADELAGW-KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALD--------TSDNIGNF 74 (151)
T ss_dssp ---CEEET-TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESS--------CHHHHHHH
T ss_pred Ccchhhcc-cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC--------ChHHHHHH
Confidence 34455543 7999999999999999999999999999999999999999998889999999986 67899999
Q ss_pred HHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 91 VCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 91 ~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
++ +++++||++ .+....... +.. ... ..+...|++||||++|+|++++.|..+.+++.+.|+++.+.
T Consensus 75 ~~-~~~~~~~~~--~~~~~~~~~-~~~----~~~----~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~ 141 (151)
T 3raz_A 75 LK-QTPVSYPIW--RYTGANSRN-FMK----TYG----NTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSK 141 (151)
T ss_dssp HH-HSCCSSCEE--EECCSCHHH-HHH----TTT----CCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC
T ss_pred HH-HcCCCCceE--ecCccchHH-HHH----HhC----CccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 97 889999998 443322211 111 110 11444559999999999999999999999999999998753
No 44
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.96 E-value=2.6e-28 Score=166.50 Aligned_cols=138 Identities=28% Similarity=0.366 Sum_probs=108.8
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
.....|+++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++++|+.+++|++|. .
T Consensus 7 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~-------~ 79 (152)
T 2lrt_A 7 EDKIKEASIIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDG-------D 79 (152)
T ss_dssp CSSSCTTCSCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSC-------C
T ss_pred hhhccCCCCCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccC-------C
Confidence 445689999999999999999999999999999999999999999999999999999999899999999984 5
Q ss_pred hHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHH
Q 030881 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 163 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l 163 (170)
.+.++++.. +.+||++ .|..+....-...| ++...|++||||++|+|++++.|..+. ++.+
T Consensus 80 ~~~~~~~~~---~~~~~~~--~d~~~~~~~~~~~~-----------~v~~~P~~~lid~~G~i~~~~~g~~~~---e~~~ 140 (152)
T 2lrt_A 80 EHFWKTSAD---NLPWVCV--RDANGAYSSYISLY-----------NVTNLPSVFLVNRNNELSARGENIKDL---DEAI 140 (152)
T ss_dssp HHHHHHHHT---TCSSEEE--ECSSGGGCHHHHHH-----------TCCSCSEEEEEETTTEEEEETTTCSCH---HHHH
T ss_pred HHHHHHHHh---CCCceEE--ECCCCcchHHHHHc-----------CcccCceEEEECCCCeEEEecCCHHHH---HHHH
Confidence 566777764 3678877 56554322222233 233344999999999999998776554 4444
Q ss_pred HHHh
Q 030881 164 KKLL 167 (170)
Q Consensus 164 ~~~l 167 (170)
.+++
T Consensus 141 ~~~~ 144 (152)
T 2lrt_A 141 KKLL 144 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 45
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.96 E-value=1.9e-28 Score=169.65 Aligned_cols=149 Identities=14% Similarity=0.186 Sum_probs=115.7
Q ss_pred ccceeeCCCCCeecCCCCCCcEEEEEEecCCCCC-ChhhHHHHHHHHHHhcc----CCcEEEEeecCCCCCCCCCChHHH
Q 030881 13 FDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGM-TNSNYIELSQLYDKYKD----QGLEILAFPCNQFGEEEPGSNDQI 87 (170)
Q Consensus 13 p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~-C~~~~~~l~~~~~~~~~----~~v~~v~is~d~~~~~~~~~~~~~ 87 (170)
|+|++.+.+|+.+++++++||++||+||++||++ |+.+++.|+++++++++ .++++++|++|. ..++.+.+
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~----~~d~~~~~ 82 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDP----ERDDVEAM 82 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCS----TTCCHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECC----CCCCHHHH
Confidence 8999999999999999999999999999999998 99999999999999974 479999999973 24678999
Q ss_pred HHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCC----ccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHH
Q 030881 88 ADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWG----IFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 163 (170)
Q Consensus 88 ~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~----~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l 163 (170)
++|++ +++.+|+.+. +.......-...|.....|. ...+.+.|.|++||||++|+|++.+.|..+++++.+.|
T Consensus 83 ~~~~~-~~~~~~~~l~--~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l 159 (171)
T 2rli_A 83 ARYVQ-DFHPRLLGLT--GSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSV 159 (171)
T ss_dssp HHHHH-TTCTTCCEEE--CCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHH
T ss_pred HHHHH-HcCCCeEEEe--CCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHH
Confidence 99997 8899998873 21100000001111111220 00123456779999999999999999988999999999
Q ss_pred HHHhc
Q 030881 164 KKLLG 168 (170)
Q Consensus 164 ~~~l~ 168 (170)
+++++
T Consensus 160 ~~ll~ 164 (171)
T 2rli_A 160 RRHMA 164 (171)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99885
No 46
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.96 E-value=3.3e-28 Score=172.41 Aligned_cols=144 Identities=13% Similarity=0.128 Sum_probs=115.2
Q ss_pred cccCCcccccceeeCCC-------------C--CeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEE
Q 030881 5 FIQNPESIFDLSVKDAR-------------G--HEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEI 68 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~-------------g--~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~ 68 (170)
.+..|+++|+|++.+.+ | +.+++++++||++||+|| ++||++|+.+++.|++++++++++++.+
T Consensus 3 ~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~v 82 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQI 82 (195)
T ss_dssp BCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEE
T ss_pred cCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEE
Confidence 47899999999999988 7 899999999999999999 9999999999999999999999889999
Q ss_pred EEeecCCCCCCCCCChHHHHHHHHhhc----CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCC
Q 030881 69 LAFPCNQFGEEEPGSNDQIADFVCTRF----KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNG 144 (170)
Q Consensus 69 v~is~d~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G 144 (170)
++|++| +.+.+++|.+ ++ +.+||++ .|....... .|..... .|. +.|++||||++|
T Consensus 83 v~Vs~d--------~~~~~~~~~~-~~~~~~~~~~~~~--~d~~~~~~~---~~~v~~~---~g~---~~P~~~lid~~G 142 (195)
T 2bmx_A 83 LGVSID--------SEFAHFQWRA-QHNDLKTLPFPML--SDIKRELSQ---AAGVLNA---DGV---ADRVTFIVDPNN 142 (195)
T ss_dssp EEEESS--------CHHHHHHHHH-HCTTGGGCCSCEE--ECTTSHHHH---HHTCBCT---TSS---BCEEEEEECTTS
T ss_pred EEEECC--------CHHHHHHHHH-HhccccCCceeEE--eCCchHHHH---HhCCccc---CCC---ccceEEEEcCCC
Confidence 999986 5778889986 66 7889988 453322111 2211100 011 345999999999
Q ss_pred cEEEEeCCCC----CchHHHHHHHHHhc
Q 030881 145 QVVDRYYPTT----SLLSLEHDIKKLLG 168 (170)
Q Consensus 145 ~i~~~~~~~~----~~~~l~~~l~~~l~ 168 (170)
+|++.+.|.. +.+++.+.|++++.
T Consensus 143 ~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 143 EIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp BEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred eEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 9999987654 56778888887763
No 47
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.96 E-value=2.7e-28 Score=169.45 Aligned_cols=144 Identities=15% Similarity=0.162 Sum_probs=112.6
Q ss_pred cccCCcccccceeeCCCCCeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
.+..|+++|+|++.+.+|+.+++++++||++||+|| ++||++|..+++.|+++++++ .++++++|+.| +
T Consensus 20 ~l~~g~~~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d--------~ 89 (171)
T 2yzh_A 20 ELKVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMD--------L 89 (171)
T ss_dssp CCCTTSBCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------C
T ss_pred cCCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCC--------C
Confidence 467899999999999999999999999999999999 799999999999999999999 67999999986 6
Q ss_pred hHHHHHHHHhhcCC-CCCceEEee-cCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCC-----CCCc
Q 030881 84 NDQIADFVCTRFKS-EFPIFEKID-VNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP-----TTSL 156 (170)
Q Consensus 84 ~~~~~~~~~~~~~~-~~p~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~-----~~~~ 156 (170)
.+.+++|++ +++. +||++ .| ..+.. ..|+..... .+..|. +.|++||||++|+|++.+.+ ..+.
T Consensus 90 ~~~~~~~~~-~~~~~~~~~l--~D~~~~~~--~~~gv~~~~-~~~~g~---~~p~~~liD~~G~i~~~~~~~~~~~~~~~ 160 (171)
T 2yzh_A 90 PFAQKRFCE-SFNIQNVTVA--SDFRYRDM--EKYGVLIGE-GALKGI---LARAVFIIDKEGKVAYVQLVPEITEEPNY 160 (171)
T ss_dssp HHHHHHHHH-HTTCCSSEEE--ECTTTCGG--GGGTCBBCS-STTTTS---BCCEEEEECTTSBEEEEEECSBTTSCCCC
T ss_pred HHHHHHHHH-HcCCCCeEEe--ecCccCcH--HHhCCEecc-cccCCc---eeeEEEEEcCCCeEEEEEeCCCcCCCCCH
Confidence 788899997 7899 89998 55 33322 222211000 000111 24599999999999999854 3456
Q ss_pred hHHHHHHHHHh
Q 030881 157 LSLEHDIKKLL 167 (170)
Q Consensus 157 ~~l~~~l~~~l 167 (170)
+++.+.|+++|
T Consensus 161 ~~ll~~l~~ll 171 (171)
T 2yzh_A 161 DEVVNKVKELI 171 (171)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHhhC
Confidence 77888888764
No 48
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.96 E-value=1.6e-28 Score=175.00 Aligned_cols=148 Identities=16% Similarity=0.133 Sum_probs=114.9
Q ss_pred CccccccCCcccccceeeCC--CC--CeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCC
Q 030881 1 MTSQFIQNPESIFDLSVKDA--RG--HEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQ 75 (170)
Q Consensus 1 ~~~~~~~~g~~~p~f~l~~~--~g--~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~ 75 (170)
|+...+..|+++|+|++.+. +| +.+++++++||++||+|| ++||++|+.+++.|++++++|+++++++++|++|
T Consensus 1 m~~~~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D- 79 (202)
T 1uul_A 1 MSCGEAEDLHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMD- 79 (202)
T ss_dssp ---CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-
T ss_pred CCcccccCCCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-
Confidence 56677889999999999997 78 899999999999999999 9999999999999999999999889999999986
Q ss_pred CCCCCCCChHHHHHHHHhhc-------CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEE
Q 030881 76 FGEEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVD 148 (170)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~ 148 (170)
+.+.+.+|++ ++ +.+||++ .|..+.... .|...... .|. ..|++||||++|+|++
T Consensus 80 -------~~~~~~~~~~-~~~~~~~~~~~~~p~l--~D~~~~~~~---~ygv~~~~--~g~---~~P~~~lid~~G~i~~ 141 (202)
T 1uul_A 80 -------SEYSHLAWTS-IERKRGGLGQMNIPIL--ADKTKCIMK---SYGVLKEE--DGV---AYRGLFIIDPKQNLRQ 141 (202)
T ss_dssp -------CHHHHHHHHH-SCGGGTCCCSCSSCEE--ECTTCHHHH---HHTCEETT--TTE---ECEEEEEECTTSBEEE
T ss_pred -------CHHHHHHHHH-HHHhhCCCCCCceeEE--ECCchHHHH---HcCCccCC--CCc---eeeEEEEECCCCEEEE
Confidence 6778888887 65 7889988 554332221 22111000 011 3459999999999999
Q ss_pred EeCCCCC----chHHHHHHHHHh
Q 030881 149 RYYPTTS----LLSLEHDIKKLL 167 (170)
Q Consensus 149 ~~~~~~~----~~~l~~~l~~~l 167 (170)
.+.|... .+++.+.|+++.
T Consensus 142 ~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 142 ITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp EEEECTTBCCCHHHHHHHHHHHH
T ss_pred EEeCCCCCCCCHHHHHHHHHHhh
Confidence 9766443 467777777765
No 49
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.96 E-value=1.2e-28 Score=173.56 Aligned_cols=142 Identities=13% Similarity=0.124 Sum_probs=111.6
Q ss_pred cCCcccccceeeCC-CC--CeecCCCCCCcEEEEEEec-CCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCC
Q 030881 7 QNPESIFDLSVKDA-RG--HEVDLSTYKGKVLLIVNVA-SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (170)
Q Consensus 7 ~~g~~~p~f~l~~~-~g--~~~~l~~~~gk~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~ 82 (170)
..|+++|+|++.+. +| +.+++++++||++||+||+ +||++|+.+++.|++++++|+++|+++++|+.|
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d-------- 73 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTD-------- 73 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESS--------
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECC--------
Confidence 57999999999998 59 8999999999999999995 999999999999999999999889999999986
Q ss_pred ChHHHHHHHHhhc----CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCC----
Q 030881 83 SNDQIADFVCTRF----KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT---- 154 (170)
Q Consensus 83 ~~~~~~~~~~~~~----~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~---- 154 (170)
+.+.+++|++ ++ +++||++ .|..+.... .|...... .|. +.|++||||++|+|++.+.+..
T Consensus 74 ~~~~~~~~~~-~~~~~~~~~fp~l--~D~~~~~~~---~ygv~~~~--~g~---~~p~~~lID~~G~i~~~~~~~~~~~~ 142 (186)
T 1n8j_A 74 THFTHKAWHS-SSETIAKIKYAMI--GDPTGALTR---NFDNMRED--EGL---ADRATFVVDPQGIIQAIEVTAEGIGR 142 (186)
T ss_dssp CHHHHHHHHH-HCTTGGGCCSEEE--ECTTSHHHH---HTTCEETT--TTE---ECEEEEEECTTSBEEEEEEECTTBCC
T ss_pred CHHHHHHHHH-HcCcccCCceeEE--ECCchHHHH---HhCCccCC--CCc---eeeEEEEECCCCeEEEEEecCCCCCC
Confidence 6778889987 77 7889988 554332221 11110000 011 2459999999999999987643
Q ss_pred CchHHHHHHHHHh
Q 030881 155 SLLSLEHDIKKLL 167 (170)
Q Consensus 155 ~~~~l~~~l~~~l 167 (170)
+.+++.+.|+++.
T Consensus 143 ~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 143 DASDLLRKIKAAQ 155 (186)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 4667888777765
No 50
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.96 E-value=3e-28 Score=164.47 Aligned_cols=145 Identities=18% Similarity=0.236 Sum_probs=121.3
Q ss_pred ccCCccccccee--eCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 6 IQNPESIFDLSV--KDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 6 ~~~g~~~p~f~l--~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
+..|.++|+|++ .+.+|+.+++++++||++||+||++||++|..+.+.+++++++++++ +.+++|++|... ...+
T Consensus 1 l~~g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~--~~~~ 77 (148)
T 2b5x_A 1 MKLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSE--DDLD 77 (148)
T ss_dssp CCTTCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCST--TTSS
T ss_pred CCCCCCCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCc--cccC
Confidence 357999999999 68899999999999999999999999999999999999999999887 999999987422 1237
Q ss_pred hHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHH
Q 030881 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 163 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l 163 (170)
.+.++++++ +++.+||++ .|....... . +++...|+++++|++|++++.+.|..+.+++.+.|
T Consensus 78 ~~~~~~~~~-~~~~~~~~~--~d~~~~~~~---~-----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 140 (148)
T 2b5x_A 78 PGKIKETAA-EHDITQPIF--VDSDHALTD---A-----------FENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRV 140 (148)
T ss_dssp HHHHHHHHH-HTTCCSCEE--ECSSCHHHH---H-----------TCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHH
T ss_pred HHHHHHHHH-HcCCCcceE--ECCchhHHH---H-----------hCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHH
Confidence 889999997 789999987 444322111 1 34455569999999999999999988899999999
Q ss_pred HHHhcCC
Q 030881 164 KKLLGLS 170 (170)
Q Consensus 164 ~~~l~~~ 170 (170)
+++++++
T Consensus 141 ~~~l~~~ 147 (148)
T 2b5x_A 141 NRVLAET 147 (148)
T ss_dssp HHHHTTC
T ss_pred HHHHhcc
Confidence 9998753
No 51
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.96 E-value=2.2e-28 Score=167.80 Aligned_cols=134 Identities=16% Similarity=0.241 Sum_probs=107.0
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCc-EEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGK-VLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEP 81 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk-~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~ 81 (170)
.++..|.++|+|++.+.+|+.+++++++|| ++||+|| ++||++|+.+++.|++++++++++++.+++|++|
T Consensus 7 ~~~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d------- 79 (160)
T 1xvw_A 7 HMLNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVG------- 79 (160)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESC-------
T ss_pred CCCCCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCC-------
Confidence 347899999999999999999999999998 9999998 9999999999999999999999889999999986
Q ss_pred CChHHHHHHHHhhcCCCCCceEEeec--CCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCc
Q 030881 82 GSNDQIADFVCTRFKSEFPIFEKIDV--NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSL 156 (170)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~p~~~~~d~--~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~ 156 (170)
+.+.+++|++ +++.+||++ .|. .+.... .|...... .++| .|++||||++|+|++.+.|..+.
T Consensus 80 -~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~~---~~~v~~~~----~~~p-~~~~~lid~~G~i~~~~~g~~~~ 144 (160)
T 1xvw_A 80 -PPPTHKIWAT-QSGFTFPLL--SDFWPHGAVSQ---AYGVFNEQ----AGIA-NRGTFVVDRSGIIRFAEMKQPGE 144 (160)
T ss_dssp -CHHHHHHHHH-HHTCCSCEE--ECTTTTTHHHH---HTTCEETT----TTEE-CSEEEEECTTSBEEEEEECCTTC
T ss_pred -CHHHHHHHHH-hcCCCceEE--ecCCcChHHHH---HcCCcccc----CCCe-eeeEEEECCCCeEEEEEecCCCC
Confidence 6789999997 789999988 453 222111 11111000 0222 23899999999999998876543
No 52
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.95 E-value=3.4e-28 Score=169.80 Aligned_cols=137 Identities=14% Similarity=0.201 Sum_probs=114.4
Q ss_pred cccCCcccccceeeCCCC--CeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCC
Q 030881 5 FIQNPESIFDLSVKDARG--HEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g--~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~ 82 (170)
.+..|.++|+|++.+.+| +.+++++++||++||+||++||++|+.+++.|++++++ ++.+++|+++ +
T Consensus 29 ~~~~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~-------d 97 (176)
T 3kh7_A 29 SALIGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYK-------D 97 (176)
T ss_dssp TTTTTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEES-------C
T ss_pred ccccCCcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCC-------C
Confidence 467999999999999999 88999999999999999999999999999999999886 6999999986 4
Q ss_pred ChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHH
Q 030881 83 SNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHD 162 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~ 162 (170)
+.+.+.+|++ +++.+|+.+. .|..+... ..| ++...|++||||++|+|++.+.|..+.+++.+.
T Consensus 98 ~~~~~~~~~~-~~~~~~~~~~-~d~~~~~~---~~~-----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 161 (176)
T 3kh7_A 98 DNAAAIKWLN-ELHNPYLLSI-SDADGTLG---LDL-----------GVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQ 161 (176)
T ss_dssp CHHHHHHHHH-HTTCCCSEEE-EETTCHHH---HHH-----------TCCSSCEEEEECTTCBEEEEEESCCCHHHHHHH
T ss_pred CHHHHHHHHH-HcCCCCceEE-ECCcchHH---HHc-----------CCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHH
Confidence 8899999997 7899998532 44433221 122 233445999999999999999998888888888
Q ss_pred HHHHhc
Q 030881 163 IKKLLG 168 (170)
Q Consensus 163 l~~~l~ 168 (170)
|+++|+
T Consensus 162 l~~~l~ 167 (176)
T 3kh7_A 162 LAPLYQ 167 (176)
T ss_dssp THHHHH
T ss_pred HHHHHH
Confidence 887764
No 53
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.95 E-value=1.4e-27 Score=162.26 Aligned_cols=140 Identities=19% Similarity=0.300 Sum_probs=117.1
Q ss_pred ccCCcccc-cceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCCh
Q 030881 6 IQNPESIF-DLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN 84 (170)
Q Consensus 6 ~~~g~~~p-~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~ 84 (170)
+..|.++| +|++.+.+|+.+++++++||++||+||++||++|+.+.+.|++++++++++++.+++|++|. ..
T Consensus 3 l~~G~~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~~ 75 (152)
T 2lja_A 3 LRSGNPSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDK-------NK 75 (152)
T ss_dssp TTTTCCCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCS-------CH
T ss_pred cccCCCCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccC-------cH
Confidence 67899999 99999999999999999999999999999999999999999999999998889999999873 56
Q ss_pred HHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHH
Q 030881 85 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIK 164 (170)
Q Consensus 85 ~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~ 164 (170)
+.+.++.+ +++..++.+. .|.... +... +++...|+++|||++|+|++.+.|..+.+++.+.|+
T Consensus 76 ~~~~~~~~-~~~~~~~~~~-~d~~~~----~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 139 (152)
T 2lja_A 76 KAWENMVT-KDQLKGIQLH-MGTDRT----FMDA----------YLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFN 139 (152)
T ss_dssp HHHHHHHH-HHTCCSEEEE-CSSCTH----HHHH----------TTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHH
T ss_pred HHHHHHHH-hcCCCCceee-cCcchh----HHHH----------cCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHH
Confidence 78899987 6677765442 232111 1111 234455599999999999999999889999999999
Q ss_pred HHhc
Q 030881 165 KLLG 168 (170)
Q Consensus 165 ~~l~ 168 (170)
+++.
T Consensus 140 ~~~~ 143 (152)
T 2lja_A 140 ELLG 143 (152)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9875
No 54
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.95 E-value=4.9e-28 Score=171.91 Aligned_cols=137 Identities=13% Similarity=0.166 Sum_probs=112.8
Q ss_pred ccCCcccccceeeCC--CCC---eecCCCC-CCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCC
Q 030881 6 IQNPESIFDLSVKDA--RGH---EVDLSTY-KGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGE 78 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~--~g~---~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~ 78 (170)
+..|+++|+|++.+. +|+ .++++++ +||++||+|| ++||++|+.+++.|++++++++++++.+++|++|
T Consensus 1 ~~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d---- 76 (198)
T 1zof_A 1 MVVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSID---- 76 (198)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESS----
T ss_pred CCCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECC----
Confidence 357999999999998 898 9999999 9999999999 9999999999999999999999889999999987
Q ss_pred CCCCChHHHHHHHHhh-------cCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccc-----cCceeEEECCCCcE
Q 030881 79 EEPGSNDQIADFVCTR-------FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQ-----WNFAKFLVDKNGQV 146 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~-------~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~p~~~lid~~G~i 146 (170)
+.+.+++|.+ + ++.+||++ .|..+.... . +++. +.|++||||++|+|
T Consensus 77 ----~~~~~~~~~~-~~~~~~~~~~~~~~~~--~d~~~~~~~---~-----------~~v~~~~g~~~P~~~lid~~G~i 135 (198)
T 1zof_A 77 ----SEQVHFAWKN-TPVEKGGIGQVSFPMV--ADITKSISR---D-----------YDVLFEEAIALRGAFLIDKNMKV 135 (198)
T ss_dssp ----CHHHHHHHHT-SCGGGTCCCCCSSCEE--ECTTSHHHH---H-----------TTCEETTTEECEEEEEEETTTEE
T ss_pred ----CHHHHHHHHH-hhhhcccccCceeEEE--ECCchHHHH---H-----------hCCcccCCcccceEEEECCCCEE
Confidence 5678888886 5 68889988 554322211 1 2232 45599999999999
Q ss_pred EEEeCCCC----CchHHHHHHHHHh
Q 030881 147 VDRYYPTT----SLLSLEHDIKKLL 167 (170)
Q Consensus 147 ~~~~~~~~----~~~~l~~~l~~~l 167 (170)
++.+.|.. +.+++.+.|+++.
T Consensus 136 ~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 136 RHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp EEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99987754 4567777777765
No 55
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.95 E-value=6.6e-28 Score=162.22 Aligned_cols=138 Identities=17% Similarity=0.257 Sum_probs=113.5
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
..+..|.++|+|++.+.+|+.+++++ +||++||+||++||++|+.+++.|+++++++++.++.+++|++|. ..++
T Consensus 7 ~~~~~g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~----~~~~ 81 (145)
T 3erw_A 7 AEEKQPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN----SEQN 81 (145)
T ss_dssp -----CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGG----GSSC
T ss_pred ccccCCCcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccC----CcCC
Confidence 34678999999999999999999999 999999999999999999999999999999997789999999973 2348
Q ss_pred hHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHH
Q 030881 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 163 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l 163 (170)
.+.+++|.+ +++.+||++ .|....... . +++...|++++||++|+|++.+.|..+.+++.+.|
T Consensus 82 ~~~~~~~~~-~~~~~~~~~--~d~~~~~~~---~-----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 82 QQVVEDFIK-ANKLTFPIV--LDSKGELMK---E-----------YHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HHHHHHHHH-HTTCCSCEE--ECSSSHHHH---H-----------TTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHHHH-HcCCceeEE--EcCchhHHH---h-----------cCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 899999997 789999988 454332111 1 34455569999999999999999988888887766
No 56
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.95 E-value=3.4e-28 Score=174.52 Aligned_cols=145 Identities=12% Similarity=0.084 Sum_probs=110.9
Q ss_pred ccccCCcccccceeeCC---CCCeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDA---RGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEE 79 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~---~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~ 79 (170)
..+..|+++|+|++.+. +|+.+++++++||++||+|| ++||++|+.+++.|++++++|+++++++|+||+|
T Consensus 17 ~~~~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D----- 91 (211)
T 2pn8_A 17 NLYFQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD----- 91 (211)
T ss_dssp --CCSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-----
T ss_pred ccCCCCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-----
Confidence 45678999999999975 46899999999999999999 9999999999999999999999889999999986
Q ss_pred CCCChHHHHHHHHhhc-------CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCC
Q 030881 80 EPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~ 152 (170)
+.+.+++|++ ++ +.+||++ .|..+.... .|.... . ..|. ..|++||||++|+|++.+.+
T Consensus 92 ---~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~~~~---~ygv~~-~-~~g~---~~p~~~lID~~G~I~~~~~g 157 (211)
T 2pn8_A 92 ---SQFTHLAWIN-TPRRQGGLGPIRIPLL--SDLTHQISK---DYGVYL-E-DSGH---TLRGLFIIDDKGILRQITLN 157 (211)
T ss_dssp ---CHHHHHHHHT-SCGGGTCCCSCSSCEE--ECTTSHHHH---HTTCEE-T-TTTE---ECEEEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHHH-HhhhccCccCCceEEE--ECCchHHHH---HcCCcc-c-CCCc---ccceEEEECCCCEEEEEEec
Confidence 6778888886 55 6789988 554332211 111100 0 0011 24599999999999999765
Q ss_pred CC----CchHHHHHHHHHh
Q 030881 153 TT----SLLSLEHDIKKLL 167 (170)
Q Consensus 153 ~~----~~~~l~~~l~~~l 167 (170)
.. +.+++.+.|+++.
T Consensus 158 ~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 158 DLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp CTTBCCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhh
Confidence 43 4566777777664
No 57
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.95 E-value=6.1e-28 Score=171.81 Aligned_cols=156 Identities=15% Similarity=0.102 Sum_probs=114.2
Q ss_pred ccCCccc--ccceeeCCCCCeecCCCCCCcEEEEEEecCCCCC-ChhhHHHHHHHHHHhccC---CcEEEEeecCCCCCC
Q 030881 6 IQNPESI--FDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGM-TNSNYIELSQLYDKYKDQ---GLEILAFPCNQFGEE 79 (170)
Q Consensus 6 ~~~g~~~--p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~-C~~~~~~l~~~~~~~~~~---~v~~v~is~d~~~~~ 79 (170)
...|.++ |+|++.|.+|+.+++++++||++||+||++||++ |+.+++.|+++++++.++ ++.+++|++|.
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~---- 88 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP---- 88 (200)
T ss_dssp ---CCCCCCCCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT----
T ss_pred hccCCCCcCCCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC----
Confidence 4567775 9999999999999999999999999999999998 999999999999998753 79999999973
Q ss_pred CCCChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHh-ccCC----ccCCccccCceeEEECCCCcEEEEeCCCC
Q 030881 80 EPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKS-GKWG----IFGDDIQWNFAKFLVDKNGQVVDRYYPTT 154 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~-~~~~----~~~~~i~~~p~~~lid~~G~i~~~~~~~~ 154 (170)
+.++.+.+++|++ +++.+|+.+. +.......-...|... ..|. ..++.+.|.|++||||++|+|++.+.|..
T Consensus 89 ~~d~~~~~~~~~~-~~~~~~~~l~--~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~ 165 (200)
T 2b7k_A 89 ARDSPAVLKEYLS-DFHPSILGLT--GTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNY 165 (200)
T ss_dssp TTCCHHHHHHHHT-TSCTTCEEEE--CCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTC
T ss_pred CCCCHHHHHHHHH-HcCCCceEEe--CCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCC
Confidence 2357899999997 7888887763 1110000000111111 1110 01133557789999999999999998888
Q ss_pred CchHHHHHHHHHhc
Q 030881 155 SLLSLEHDIKKLLG 168 (170)
Q Consensus 155 ~~~~l~~~l~~~l~ 168 (170)
+++.+.+.|.++|+
T Consensus 166 ~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 166 DEKTGVDKIVEHVK 179 (200)
T ss_dssp CTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 88888888877764
No 58
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.95 E-value=4.3e-28 Score=174.18 Aligned_cols=144 Identities=15% Similarity=0.058 Sum_probs=113.5
Q ss_pred ccccCCcccccceeeCC--CC--CeecCCCC-CCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCC
Q 030881 4 QFIQNPESIFDLSVKDA--RG--HEVDLSTY-KGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFG 77 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~--~g--~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~ 77 (170)
..+..|+++|+|++.+. +| +.++++++ +||++||+|| ++||++|+.+++.|++++++|+++++++|+|++|
T Consensus 19 ~~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D--- 95 (213)
T 2i81_A 19 SPTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVD--- 95 (213)
T ss_dssp -CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESS---
T ss_pred ccccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC---
Confidence 35678999999999998 89 89999999 9999999999 9999999999999999999999889999999986
Q ss_pred CCCCCChHHHHHHHHhhc-------CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEe
Q 030881 78 EEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRY 150 (170)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~ 150 (170)
+.+.+++|++ ++ +++||++ .|..+.... .|.... . .|. ..|++||||++|+|++.+
T Consensus 96 -----~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~~~~---~ygv~~-~--~g~---~~p~~~lID~~G~i~~~~ 158 (213)
T 2i81_A 96 -----SKYTHLAWKK-TPLAKGGIGNIKHTLL--SDITKSISK---DYNVLF-D--DSV---SLRAFVLIDMNGIVQHLL 158 (213)
T ss_dssp -----CHHHHHHHHS-SCGGGTCCCSCSSEEE--ECTTSHHHH---HTTCEE-T--TTE---ECEEEEEECTTSBEEEEE
T ss_pred -----CHHHHHHHHH-HHHhhCCccCCCceEE--ECCchHHHH---HhCCcc-c--cCC---cccEEEEECCCCEEEEEE
Confidence 6788888886 66 7789988 554332221 111110 0 011 455999999999999997
Q ss_pred CCCC----CchHHHHHHHHHh
Q 030881 151 YPTT----SLLSLEHDIKKLL 167 (170)
Q Consensus 151 ~~~~----~~~~l~~~l~~~l 167 (170)
.+.. +.+++.+.|+++.
T Consensus 159 ~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 159 VNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp EECTTCCCCHHHHHHHHHHHH
T ss_pred ecCCCCCCCHHHHHHHHHHHH
Confidence 6543 3667888887765
No 59
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.95 E-value=7.9e-28 Score=165.91 Aligned_cols=140 Identities=11% Similarity=0.076 Sum_probs=108.3
Q ss_pred cccCCcccccceeeCCCCCeecCCCCCCcEEEEEEec-CCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVA-SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
.+..|.++|+|++.+.+|+.+++++++||++||+||+ +||++|..+++.|+++++++ .++.+++|+.| +
T Consensus 15 ~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d--------~ 84 (163)
T 1psq_A 15 QLQVGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMD--------L 84 (163)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------C
T ss_pred CCCCCCCCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECC--------C
Confidence 4678999999999999999999999999999999995 99999999999999999999 67999999986 6
Q ss_pred hHHHHHHHHhhcCC-CCCceEEee-cCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCC-----Cc
Q 030881 84 NDQIADFVCTRFKS-EFPIFEKID-VNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT-----SL 156 (170)
Q Consensus 84 ~~~~~~~~~~~~~~-~~p~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~-----~~ 156 (170)
.+.+++|++ +++. +||++ .| ..+... . .|...... .++ +.|++||||++|+|++.+.|.. +.
T Consensus 85 ~~~~~~~~~-~~~~~~~~~l--~D~~~~~~~-~--~~gv~~~~----~g~-~~p~~~liD~~G~i~~~~~g~~~~~~~~~ 153 (163)
T 1psq_A 85 PFAQKRWCG-AEGLDNAIML--SDYFDHSFG-R--DYALLINE----WHL-LARAVFVLDTDNTIRYVEYVDNINSEPNF 153 (163)
T ss_dssp HHHHHHHHH-HHTCTTSEEE--ECTTTCHHH-H--HHTCBCTT----TCS-BCCEEEEECTTCBEEEEEECSBTTSCCCH
T ss_pred HHHHHHHHH-hcCCCCcEEe--cCCchhHHH-H--HhCCcccc----CCc-eEEEEEEEcCCCeEEEEEecCCcCCCCCH
Confidence 788889997 7799 99988 45 332211 1 22111110 011 2359999999999999986532 22
Q ss_pred hHHHHHHHH
Q 030881 157 LSLEHDIKK 165 (170)
Q Consensus 157 ~~l~~~l~~ 165 (170)
+++.+.|++
T Consensus 154 ~~~l~~l~~ 162 (163)
T 1psq_A 154 EAAIAAAKA 162 (163)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 456666654
No 60
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.95 E-value=1.1e-27 Score=167.01 Aligned_cols=147 Identities=10% Similarity=0.012 Sum_probs=108.9
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCC-CCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASK-CGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~-C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~ 82 (170)
..+..|.++|+|++.+.+|+.+++++++||++||+||++| |++|+.++|.|++++++ .++.+|+|+.|
T Consensus 16 ~~l~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D-------- 84 (175)
T 1xvq_A 16 ELPAVGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKD-------- 84 (175)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESS--------
T ss_pred CCCCcCCcCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECC--------
Confidence 3467899999999999999999999999999999999999 99999999999999998 56999999986
Q ss_pred ChHHHHHHHHhhcCC-CCCceEEeecCCCCchhHHHHhHhccC-CccCCccccCceeEEECCCCcEEEEeCC--CCCchH
Q 030881 83 SNDQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKW-GIFGDDIQWNFAKFLVDKNGQVVDRYYP--TTSLLS 158 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~-~~p~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~i~~~p~~~lid~~G~i~~~~~~--~~~~~~ 158 (170)
+.+.+++|++ +++. +||++ .|....... .|.....+ +..| .+.|++||||++|+|++.+.| .....+
T Consensus 85 ~~~~~~~~~~-~~~~~~~~~l--~D~~~~~~~---~~gv~~~~~~~~g---~~~p~~~lid~~G~I~~~~~g~~~~~~~~ 155 (175)
T 1xvq_A 85 LPFAQKRFCG-AEGTENVMPA--SAFRDSFGE---DYGVTIADGPMAG---LLARAIVVIGADGNVAYTELVPEIAQEPN 155 (175)
T ss_dssp CHHHHTTCC-------CEEEE--ECTTSSHHH---HTTCBBCSSTTTT---SBCSEEEEECTTSBEEEEEECSBTTCCCC
T ss_pred CHHHHHHHHH-HcCCCCceEe--eCCHHHHHH---HhCCcccccccCC---cccceEEEECCCCeEEEEEECCCcCCCCC
Confidence 6778888886 7788 89988 554432221 12221111 0111 134699999999999999853 334456
Q ss_pred HHHHHHHHhcCC
Q 030881 159 LEHDIKKLLGLS 170 (170)
Q Consensus 159 l~~~l~~~l~~~ 170 (170)
+++.|+++.++|
T Consensus 156 ~~~~l~~l~~~~ 167 (175)
T 1xvq_A 156 YEAALAALGATS 167 (175)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHhhc
Confidence 888887776543
No 61
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.95 E-value=8.2e-28 Score=165.75 Aligned_cols=141 Identities=22% Similarity=0.281 Sum_probs=115.5
Q ss_pred ccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCC----------
Q 030881 6 IQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQ---------- 75 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~---------- 75 (170)
...|.++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++++ ++.|++|++|.
T Consensus 11 ~~~g~~~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~ 88 (165)
T 3ha9_A 11 EEVLEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLN 88 (165)
T ss_dssp HHHHHHHHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCC
T ss_pred ccccCcCCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccc
Confidence 457889999999999999999999999999999999999999999999999999998 69999999871
Q ss_pred -CCCCCCCChHHHHHHHHhhcCC-CCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC
Q 030881 76 -FGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (170)
Q Consensus 76 -~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~ 153 (170)
+.....++.+.+++|.+ +++. +||++ .| ..... .. +++...|+++|||++|+|++ .|.
T Consensus 89 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~d-~~~~~---~~-----------~~v~~~P~~~lid~~G~i~~--~g~ 148 (165)
T 3ha9_A 89 KPGYPPPDTPEMFRKFIA-NYGDPSWIMV--MD-DGSLV---EK-----------FNVRSIDYIVIMDKSSNVLY--AGT 148 (165)
T ss_dssp STTSCCCCCHHHHHHHHH-HHSCTTSEEE--EC-CSHHH---HH-----------TTCCSSSEEEEEETTCCEEE--EEE
T ss_pred cccCCCCCCHHHHHHHHH-HcCCCCeeEE--eC-hHHHH---HH-----------hCCCCceEEEEEcCCCcEEE--eCC
Confidence 22333468999999997 7788 99998 44 22111 11 34455569999999999999 566
Q ss_pred C-CchHHHHHHHHHhc
Q 030881 154 T-SLLSLEHDIKKLLG 168 (170)
Q Consensus 154 ~-~~~~l~~~l~~~l~ 168 (170)
. +.+++.+.|+++++
T Consensus 149 ~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 149 TPSLGELESVIKSVQG 164 (165)
T ss_dssp SCCHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHHhc
Confidence 6 78889999998875
No 62
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.95 E-value=1.1e-27 Score=165.56 Aligned_cols=142 Identities=13% Similarity=0.077 Sum_probs=106.9
Q ss_pred cccCCcccccceeeCCCCCeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
.+..|+++|+|++.+.+|+.+++++++||++||+|| ++||++|..+++.|+++++++ +++++++||.| +
T Consensus 16 ~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d--------~ 85 (165)
T 1q98_A 16 FPQVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISAD--------L 85 (165)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESS--------C
T ss_pred cCCCCCCCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCC--------C
Confidence 467899999999999999999999999999999999 799999999999999999999 67999999986 6
Q ss_pred hHHHHHHHHhhcCC-CCCceEEeecCCCCchhHHHHhHhccC-CccCCccccCceeEEECCCCcEEEEeCC--CCCchHH
Q 030881 84 NDQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKW-GIFGDDIQWNFAKFLVDKNGQVVDRYYP--TTSLLSL 159 (170)
Q Consensus 84 ~~~~~~~~~~~~~~-~~p~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~i~~~p~~~lid~~G~i~~~~~~--~~~~~~l 159 (170)
.+.+++|++ ++++ +||++ .|........ .|...... ...| + +.|++||||++|+|++.+.| .....++
T Consensus 86 ~~~~~~~~~-~~~~~~~~~l--~D~~~~~~~~--~~gv~~~~~~~~g--~-~~p~~~liD~~G~i~~~~~~~~~~~~~~~ 157 (165)
T 1q98_A 86 PFAQARFCG-AEGIENAKTV--STFRNHALHS--QLGVDIQTGPLAG--L-TSRAVIVLDEQNNVLHSQLVEEIKEEPNY 157 (165)
T ss_dssp HHHHTTCTT-TTTCTTEEEE--ECTTCTHHHH--HTTCEECSSTTTT--S-BCCEEEEECTTSBEEEEEECSBTTSCCCH
T ss_pred HHHHHHHHH-HcCCCceEEe--eccccchHHH--HhCceecccccCC--c-cceeEEEEcCCCEEEEEEeCCCCCCCCCH
Confidence 778888886 7788 79988 4541111111 11111100 0011 1 35699999999999999864 2233345
Q ss_pred HHHHH
Q 030881 160 EHDIK 164 (170)
Q Consensus 160 ~~~l~ 164 (170)
++.|+
T Consensus 158 ~~~l~ 162 (165)
T 1q98_A 158 EAALA 162 (165)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 63
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.95 E-value=2.2e-27 Score=171.29 Aligned_cols=145 Identities=14% Similarity=0.074 Sum_probs=111.0
Q ss_pred ccccCCcccccceeeC---CCCCeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCC
Q 030881 4 QFIQNPESIFDLSVKD---ARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEE 79 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~---~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~ 79 (170)
..+..|+++|+|++.+ .+|+.+++++++||++||+|| ++||++|+.+++.|++++++|+++++++|+|++|
T Consensus 25 ~~l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D----- 99 (220)
T 1zye_A 25 PAPAVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVD----- 99 (220)
T ss_dssp --CCTTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESS-----
T ss_pred CcccCCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-----
Confidence 4578999999999985 568999999999999999999 9999999999999999999999889999999987
Q ss_pred CCCChHHHHHHHHhhc-------CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCC
Q 030881 80 EPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~ 152 (170)
+.+...+|++ ++ +.+||++ .|....... .|... .. ..|. ..|++||||++|+|++.+.+
T Consensus 100 ---~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~i~~---~ygv~-~~-~~g~---~~P~~~liD~~G~I~~~~~g 165 (220)
T 1zye_A 100 ---SHFSHLAWIN-TPRKNGGLGHMNIALL--SDLTKQISR---DYGVL-LE-GPGL---ALRGLFIIDPNGVIKHLSVN 165 (220)
T ss_dssp ---CHHHHHHHHT-SCGGGTCCCSCSSEEE--ECTTSHHHH---HTTCE-ET-TTTE---ECEEEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHHH-HHHHhCCCcCCceEEE--ECCcHHHHH---HhCCe-ec-CCCc---ccceEEEECCCCEEEEEEec
Confidence 5677888886 55 6789988 554322211 11111 00 0011 34599999999999999766
Q ss_pred CC----CchHHHHHHHHHh
Q 030881 153 TT----SLLSLEHDIKKLL 167 (170)
Q Consensus 153 ~~----~~~~l~~~l~~~l 167 (170)
.. +.+++.+.|+++.
T Consensus 166 ~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 166 DLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp CTTCCCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhh
Confidence 43 3467888887765
No 64
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.95 E-value=5.3e-28 Score=167.25 Aligned_cols=127 Identities=18% Similarity=0.131 Sum_probs=101.1
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~ 82 (170)
..+..|+++|+|++.+.+|+.+++++++||++||+|| ++||++|..+++.|++++++ +++.+++|+.|
T Consensus 18 ~~l~~G~~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d-------- 86 (166)
T 3p7x_A 18 QQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISAD-------- 86 (166)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESS--------
T ss_pred ccCCCCCCCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECC--------
Confidence 4567999999999999999999999999999999999 78999999999999999888 67999999976
Q ss_pred ChHHHHHHHHhhcCC-CCCceEEeec-CCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCC
Q 030881 83 SNDQIADFVCTRFKS-EFPIFEKIDV-NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~-~~p~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~ 152 (170)
+.+.+++|++ ++++ +||++ .|. .+. ....|+ .... ..|. +.|++||||++|+|++.+.+
T Consensus 87 ~~~~~~~~~~-~~~~~~~~~l--~D~~~~~-~~~~~g--v~~~--~~g~---~~p~~~liD~~G~i~~~~~~ 147 (166)
T 3p7x_A 87 LPFAQKRWCA-SAGLDNVITL--SDHRDLS-FGENYG--VVME--ELRL---LARAVFVLDADNKVVYKEIV 147 (166)
T ss_dssp CHHHHHHHHH-HHTCSSCEEE--ECTTTCH-HHHHHT--CEET--TTTE---ECCEEEEECTTCBEEEEEEC
T ss_pred CHHHHHHHHH-HcCCCceEEc--cCCchhH-HHHHhC--Cccc--cCCc---eeeEEEEECCCCeEEEEEEc
Confidence 7889999997 7899 89998 565 332 222121 1100 0011 24599999999999998543
No 65
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.95 E-value=5.1e-28 Score=185.11 Aligned_cols=145 Identities=21% Similarity=0.292 Sum_probs=122.9
Q ss_pred cccCCcccccce-----eeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCC
Q 030881 5 FIQNPESIFDLS-----VKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEE 79 (170)
Q Consensus 5 ~~~~g~~~p~f~-----l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~ 79 (170)
.+..|.++|+|+ +.+.+|+.+++++++||++||+||++||++|+.++|.|++++++++++++.|++|++|.+..
T Consensus 50 ~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~- 128 (352)
T 2hyx_A 50 QLESCGTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAF- 128 (352)
T ss_dssp SCCCCCBCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGG-
T ss_pred ccCCCCcCCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccc-
Confidence 467899999999 99999999999999999999999999999999999999999999998899999999874211
Q ss_pred CCCChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHH
Q 030881 80 EPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSL 159 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l 159 (170)
.++.+.+++|++ +++++||++ .|....... . +++...|++||||++|+|++++.|..+.+++
T Consensus 129 -~d~~~~~~~~~~-~~~l~fpv~--~D~~~~l~~---~-----------ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l 190 (352)
T 2hyx_A 129 -EKVPGNVAKGAA-NLGISYPIA--LDNNYATWT---N-----------YRNRYWPAEYLIDATGTVRHIKFGEGDYNVT 190 (352)
T ss_dssp -GGCHHHHHHHHH-HHTCCSCEE--ECTTSHHHH---H-----------TTCCEESEEEEECTTSBEEEEEESBCCHHHH
T ss_pred -cCCHHHHHHHHH-HcCCCccEE--eCCcHHHHH---H-----------cCCCccCEEEEEeCCCeEEEEEcCCCCHHHH
Confidence 247889999997 889999988 454322111 1 3455556999999999999999998889999
Q ss_pred HHHHHHHhc
Q 030881 160 EHDIKKLLG 168 (170)
Q Consensus 160 ~~~l~~~l~ 168 (170)
.+.|+++++
T Consensus 191 ~~~I~~lL~ 199 (352)
T 2hyx_A 191 ETLVRQLLN 199 (352)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998875
No 66
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.95 E-value=7e-28 Score=164.17 Aligned_cols=143 Identities=15% Similarity=0.217 Sum_probs=119.6
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
..+..|.++|+|++.+.+|+.+++++++ |++||+||++||++|..+++.|+++++++ ++.+++|++| ..++
T Consensus 3 ~~l~~g~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d-----~~~~ 73 (154)
T 3ia1_A 3 LAVKPGEPLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISRE-----PRDT 73 (154)
T ss_dssp -CCCSBEECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECC-----TTCC
T ss_pred ccCCCCCcCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCC-----Cccc
Confidence 4578999999999999999999999999 99999999999999999999999999999 6999999985 2358
Q ss_pred hHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHH
Q 030881 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 163 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l 163 (170)
.+.++++++ +++.+||++ .|....... +. .. +++...|++||||++|+|++.+.|..+.+++.+.|
T Consensus 74 ~~~~~~~~~-~~~~~~~~~--~d~~~~~~~-~~-----~~-----~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 139 (154)
T 3ia1_A 74 REVVLEYMK-TYPRFIPLL--ASDRDRPHE-VA-----AR-----FKVLGQPWTFVVDREGKVVALFAGRAGREALLDAL 139 (154)
T ss_dssp HHHHHHHHT-TCTTEEECB--CCSSCCHHH-HH-----TT-----SSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHH
T ss_pred HHHHHHHHH-HcCCCcccc--cccccchHH-HH-----HH-----hCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHH
Confidence 899999997 889999988 442212111 11 11 34555669999999999999999999999999999
Q ss_pred HHHhcC
Q 030881 164 KKLLGL 169 (170)
Q Consensus 164 ~~~l~~ 169 (170)
+++++.
T Consensus 140 ~~~~~~ 145 (154)
T 3ia1_A 140 LLAGAD 145 (154)
T ss_dssp HHTTCC
T ss_pred HhccCc
Confidence 998864
No 67
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.95 E-value=6.2e-28 Score=174.41 Aligned_cols=133 Identities=13% Similarity=0.145 Sum_probs=103.2
Q ss_pred cccCCcccccceeeCC---CCCeecCCCCCCcEEEEEEec-CCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCC
Q 030881 5 FIQNPESIFDLSVKDA---RGHEVDLSTYKGKVLLIVNVA-SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~---~g~~~~l~~~~gk~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~ 80 (170)
.+..|+++|+|+|.+. +|+++++++++||++||+||+ +||++|+.+++.|++++++|+++|+.||+|++|
T Consensus 39 ~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D------ 112 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTD------ 112 (222)
T ss_dssp -CCSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS------
T ss_pred cccCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC------
Confidence 4779999999999965 559999999999999999996 999999999999999999999999999999986
Q ss_pred CCChHHHHHHHHhhc-------CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC
Q 030881 81 PGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~ 153 (170)
+.+...+|.+ .+ +.+||++ .|..+.... .|..... ..|. ..|++||||++|+|++.+.+.
T Consensus 113 --~~~~~~~~~~-~~~~~~~~~~~~~~~l--~D~~~~~~~---~ygv~~~--~~g~---~~P~~~lID~~G~I~~~~~g~ 179 (222)
T 3ztl_A 113 --SQYSHLAWDN-LDRKSGGLGHMKIPLL--ADRKQEISK---AYGVFDE--EDGN---AFRGLFIIDPNGILRQITIND 179 (222)
T ss_dssp --CHHHHHHHHH-SCGGGTSCCSCSSCEE--ECSSSHHHH---HTTCBCT--TTSS---BCEEEEEECTTSEEEEEEEEC
T ss_pred --CHHHHHHHHH-HhhhhccccccceeEE--eCCchHHHH---HcCCeec--CCCC---ccceEEEECCCCeEEEEEecC
Confidence 5677788876 54 8899998 554432211 1111100 0011 345999999999999998765
Q ss_pred CCc
Q 030881 154 TSL 156 (170)
Q Consensus 154 ~~~ 156 (170)
...
T Consensus 180 ~~~ 182 (222)
T 3ztl_A 180 KPV 182 (222)
T ss_dssp TTB
T ss_pred CCC
Confidence 444
No 68
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.95 E-value=1.2e-27 Score=170.24 Aligned_cols=144 Identities=13% Similarity=0.115 Sum_probs=108.9
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~ 82 (170)
..+..|+++|+|++.|.+|+.++|++++||++||+|| ++||++|..+++.|+++++++ +|+++++||.|
T Consensus 50 ~~l~~G~~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D-------- 119 (200)
T 3zrd_A 50 KLPQIGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSD-------- 119 (200)
T ss_dssp CCCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESS--------
T ss_pred ccCCCCCCCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECC--------
Confidence 3577999999999999999999999999999999999 689999999999999999999 67999999986
Q ss_pred ChHHHHHHHHhhcCC-CCCceEEeec-CCCCchhHHHHhHhccC-CccCCccccCceeEEECCCCcEEEEeCCC--CCch
Q 030881 83 SNDQIADFVCTRFKS-EFPIFEKIDV-NGEHASPLYKLLKSGKW-GIFGDDIQWNFAKFLVDKNGQVVDRYYPT--TSLL 157 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~-~~p~~~~~d~-~~~~~~~~~~~~~~~~~-~~~~~~i~~~p~~~lid~~G~i~~~~~~~--~~~~ 157 (170)
+.+.+++|++ ++++ +||++ .|. .+.. ...|+ ..... +.. ++ +.|++||||++|+|++.+.+. ....
T Consensus 120 ~~~~~~~~~~-~~~~~~f~~l--~D~~~~~~-~~~yg--v~~~~~~~~--g~-~~p~~~lID~~G~I~~~~~~~~~~~~~ 190 (200)
T 3zrd_A 120 LPFAQSRFCG-AEGLSNVITL--STLRGADF-KQAYG--VAITEGPLA--GL-TARAVVVLDGQDNVIYSELVNEITTEP 190 (200)
T ss_dssp CHHHHTTCTT-TTTCTTEEEE--ETTSCTHH-HHHTT--CEECSSTTT--TS-BCCEEEEECTTSBEEEEEECSBTTSCC
T ss_pred CHHHHHHHHH-HcCCCCceEE--ecCchHHH-HHHhC--ceeecccCC--Cc-cccEEEEECCCCeEEEEEecCCcccCC
Confidence 6788888987 7899 99988 555 2221 11111 11000 001 11 356999999999999997543 2233
Q ss_pred HHHHHHHHH
Q 030881 158 SLEHDIKKL 166 (170)
Q Consensus 158 ~l~~~l~~~ 166 (170)
++.+.|+.+
T Consensus 191 ~~~~~l~~L 199 (200)
T 3zrd_A 191 NYDAALAAL 199 (200)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHhh
Confidence 455555543
No 69
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.95 E-value=3.1e-27 Score=157.21 Aligned_cols=135 Identities=16% Similarity=0.163 Sum_probs=113.6
Q ss_pred CCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHH
Q 030881 8 NPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQI 87 (170)
Q Consensus 8 ~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~ 87 (170)
+|.++|+|++.+.+|+.+++++++||++||+||++||++|..+.+.+++++++++ ++.+++|+.+ ++.+.+
T Consensus 1 ~~~~~p~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~-------~~~~~~ 71 (136)
T 1zzo_A 1 TVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGL-------DQVPAM 71 (136)
T ss_dssp CCCGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS-------SCHHHH
T ss_pred CCCCCCCcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCC-------CCHHHH
Confidence 3678999999999999999999999999999999999999999999999999997 6999999987 378899
Q ss_pred HHHHHhhcCC-CCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHH
Q 030881 88 ADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 166 (170)
Q Consensus 88 ~~~~~~~~~~-~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~ 166 (170)
.++.+ +++. +||++ .|....... . +++...|+++++|++|+++ .+.|..+.+++.+.|+++
T Consensus 72 ~~~~~-~~~~~~~~~~--~d~~~~~~~---~-----------~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 72 QEFVN-KYPVKTFTQL--ADTDGSVWA---N-----------FGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTAL 133 (136)
T ss_dssp HHHHH-HTTCTTSEEE--ECTTCHHHH---H-----------TTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHH
T ss_pred HHHHH-HcCCCceEEE--EcCCcHHHH---H-----------cCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHH
Confidence 99997 7788 89988 443322111 1 2344455999999999999 888888999999999998
Q ss_pred hcC
Q 030881 167 LGL 169 (170)
Q Consensus 167 l~~ 169 (170)
+++
T Consensus 134 l~~ 136 (136)
T 1zzo_A 134 TSR 136 (136)
T ss_dssp C--
T ss_pred hcC
Confidence 863
No 70
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.95 E-value=1.7e-27 Score=168.32 Aligned_cols=141 Identities=18% Similarity=0.091 Sum_probs=110.1
Q ss_pred cCCcccccceeeCC--CC--CeecCCCC-CCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCC
Q 030881 7 QNPESIFDLSVKDA--RG--HEVDLSTY-KGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (170)
Q Consensus 7 ~~g~~~p~f~l~~~--~g--~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~ 80 (170)
..|+++|+|++.+. +| +.++++++ +||++||+|| ++||++|+.+++.|++++++|+++++.+++|++|
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d------ 74 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVD------ 74 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESS------
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeC------
Confidence 36899999999998 99 89999999 9999999999 9999999999999999999999889999999986
Q ss_pred CCChHHHHHHHHhhc-------CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC
Q 030881 81 PGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~ 153 (170)
+.+.+++|.+ ++ +.+||++ .|..+.... .|.... . .|. ..|++||||++|+|++.+.|.
T Consensus 75 --~~~~~~~~~~-~~~~~~~~~~~~~~~l--~D~~~~~~~---~~gv~~-~--~g~---~~P~~~liD~~G~i~~~~~g~ 140 (192)
T 2h01_A 75 --SKFTHLAWKK-TPLSQGGIGNIKHTLI--SDISKSIAR---SYDVLF-N--ESV---ALRAFVLIDKQGVVQHLLVNN 140 (192)
T ss_dssp --CHHHHHHHHT-SCGGGTCCCSCSSEEE--ECTTSHHHH---HTTCEE-T--TTE---ECCEEEEECTTSBEEEEEEGG
T ss_pred --CHHHHHHHHH-hHHhhCCccCCCcCeE--ECCcHHHHH---HhCCcC-c--CCc---eeeEEEEEcCCCEEEEEEeCC
Confidence 6788888886 65 6788988 554322111 111110 0 011 345999999999999997664
Q ss_pred C----CchHHHHHHHHHh
Q 030881 154 T----SLLSLEHDIKKLL 167 (170)
Q Consensus 154 ~----~~~~l~~~l~~~l 167 (170)
. +.+++.+.|+++.
T Consensus 141 ~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 141 LALGRSVDEILRLIDALQ 158 (192)
T ss_dssp GSSGGGHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHh
Confidence 3 3456777776654
No 71
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.95 E-value=6.5e-28 Score=166.73 Aligned_cols=143 Identities=17% Similarity=0.136 Sum_probs=111.8
Q ss_pred cccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCC-CCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 5 FIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASK-CGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~-C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
.+..|+++|+|++.+.+|+.+++++++||++||+||++| |++|+.+++.|+++++++ .++.+++|+.| +
T Consensus 17 ~~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d--------~ 86 (167)
T 2jsy_A 17 EVKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISAD--------L 86 (167)
T ss_dssp CCCTTSCCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECS--------S
T ss_pred ccCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECC--------C
Confidence 467899999999999999999999999999999999999 999999999999999999 67999999986 4
Q ss_pred hHHHHHHHHhhcCC-CCCceEEee-cCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC-----CCc
Q 030881 84 NDQIADFVCTRFKS-EFPIFEKID-VNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT-----TSL 156 (170)
Q Consensus 84 ~~~~~~~~~~~~~~-~~p~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~-----~~~ 156 (170)
.+.+++|++ +++. +||++ .| ..+.... .|...... .++ ..|++||||++|+|++.+.|. .+.
T Consensus 87 ~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~---~~~v~~~~----~g~-~~p~~~lid~~G~i~~~~~g~~~~~~~~~ 155 (167)
T 2jsy_A 87 PFAQARWCG-ANGIDKVETL--SDHRDMSFGE---AFGVYIKE----LRL-LARSVFVLDENGKVVYAEYVSEATNHPNY 155 (167)
T ss_dssp GGGTSCCGG-GSSCTTEEEE--EGGGTCHHHH---HTTCBBTT----TCS-BCCEEEEECTTSCEEEEEECSBTTSCCCS
T ss_pred HHHHHHHHH-hcCCCCceEe--eCCchhHHHH---HhCCcccc----CCc-eeeEEEEEcCCCcEEEEEecCCcCCCCCH
Confidence 567778886 7888 89988 45 3222111 11111110 011 135999999999999998542 244
Q ss_pred hHHHHHHHHHhc
Q 030881 157 LSLEHDIKKLLG 168 (170)
Q Consensus 157 ~~l~~~l~~~l~ 168 (170)
+++.+.|+++++
T Consensus 156 ~~l~~~l~~llk 167 (167)
T 2jsy_A 156 EKPIEAAKALVK 167 (167)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 778888988874
No 72
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.95 E-value=2.2e-28 Score=169.45 Aligned_cols=153 Identities=16% Similarity=0.208 Sum_probs=116.9
Q ss_pred ccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCC-ChhhHHHHHHHHHHhccC---CcEEEEeecCCCCCCCC
Q 030881 6 IQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGM-TNSNYIELSQLYDKYKDQ---GLEILAFPCNQFGEEEP 81 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~-C~~~~~~l~~~~~~~~~~---~v~~v~is~d~~~~~~~ 81 (170)
...|.++|+|++.+.+| .+++++++||++||+||++||++ |+.+++.|++++++++++ ++.+++|++|. ..
T Consensus 10 ~~~G~~~p~f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~----~~ 84 (172)
T 2k6v_A 10 RLLNPKPVDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDP----ER 84 (172)
T ss_dssp EEEEEEECCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCT----TT
T ss_pred cccCCCCCCeEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECC----CC
Confidence 34688899999999999 99999999999999999999997 999999999999999875 69999999974 34
Q ss_pred CChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHh--ccCC--ccCCccccCceeEEECCCCcEEEEeCCCC--C
Q 030881 82 GSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKS--GKWG--IFGDDIQWNFAKFLVDKNGQVVDRYYPTT--S 155 (170)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~--~~~~--~~~~~i~~~p~~~lid~~G~i~~~~~~~~--~ 155 (170)
++.+.+++|++ +++.+||++ .|.......-...|... ..+. ...+.+.+.|++|||| +|+|++.+.|.. +
T Consensus 85 d~~~~~~~~~~-~~~~~~~~l--~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~ 160 (172)
T 2k6v_A 85 DPPEVADRYAK-AFHPSFLGL--SGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEA 160 (172)
T ss_dssp CCHHHHHHHHH-HHCTTEEEE--CCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTC
T ss_pred CCHHHHHHHHH-HhCCCcEEE--eCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCC
Confidence 67899999997 789999988 33221000100111100 0000 0002355677999999 999999998877 8
Q ss_pred chHHHHHHHHHh
Q 030881 156 LLSLEHDIKKLL 167 (170)
Q Consensus 156 ~~~l~~~l~~~l 167 (170)
++++.+.|+++|
T Consensus 161 ~~~l~~~l~~ll 172 (172)
T 2k6v_A 161 TDRVVADLQALL 172 (172)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhC
Confidence 888999888764
No 73
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.95 E-value=6.8e-28 Score=165.52 Aligned_cols=132 Identities=11% Similarity=0.138 Sum_probs=106.0
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCc--EEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGK--VLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk--~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~ 80 (170)
..+..|+++|+|++.+.+|+.+++++++|| ++||+|| ++||++|+.+++.|+++++++++++ .+++|+.|
T Consensus 5 ~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d------ 77 (159)
T 2a4v_A 5 NELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSAD------ 77 (159)
T ss_dssp TCCCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESC------
T ss_pred CcCCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCC------
Confidence 457789999999999999999999999887 8999987 8999999999999999999999999 99999986
Q ss_pred CCChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCc
Q 030881 81 PGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSL 156 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~ 156 (170)
+.+.+++|++ +++.+||++ .|..+.... .|.....| .. . ..|++||| ++|+|++.+.|....
T Consensus 78 --~~~~~~~~~~-~~~~~~~~l--~D~~~~~~~---~~gv~~~p-~~-g---~~~~~~li-~~G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 78 --SVTSQKKFQS-KQNLPYHLL--SDPKREFIG---LLGAKKTP-LS-G---SIRSHFIF-VDGKLKFKRVKISPE 139 (159)
T ss_dssp --CHHHHHHHHH-HHTCSSEEE--ECTTCHHHH---HHTCBSSS-SS-C---BCCEEEEE-ETTEEEEEEESCCHH
T ss_pred --CHHHHHHHHH-HhCCCceEE--ECCccHHHH---HhCCcccc-cC-C---ccceEEEE-cCCEEEEEEccCCcc
Confidence 6788999997 789999998 554332221 23222222 00 1 23489999 999999998876544
No 74
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.95 E-value=4.1e-27 Score=156.84 Aligned_cols=132 Identities=15% Similarity=0.235 Sum_probs=111.5
Q ss_pred cccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHH
Q 030881 10 ESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIAD 89 (170)
Q Consensus 10 ~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~ 89 (170)
.++|+|++.+.+|+.+++++++||++||+||++||++|..+.+.+++++++++ ++.+++|+++. +.+.+.+
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~~~~~~ 72 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRA-------DVGAMQS 72 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS-------CHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCC-------CHHHHHH
Confidence 46899999999999999999999999999999999999999999999999997 69999999873 6889999
Q ss_pred HHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeC---CCCCchHHHHHHHHH
Q 030881 90 FVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY---PTTSLLSLEHDIKKL 166 (170)
Q Consensus 90 ~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~---~~~~~~~l~~~l~~~ 166 (170)
+.+ +++.+||++ .|....... . +++...|+++++|++|+++ ++. |..+.+++.+.|+++
T Consensus 73 ~~~-~~~~~~~~~--~d~~~~~~~---~-----------~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 73 FVS-KYNLNFTNL--NDADGVIWA---R-----------YNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp HHH-HHTCCSEEE--ECTTSHHHH---H-----------TTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC
T ss_pred HHH-HcCCCceEE--ECCchhHHH---h-----------cCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHH
Confidence 997 779999988 453322111 1 2344455999999999999 888 888899999999987
Q ss_pred hc
Q 030881 167 LG 168 (170)
Q Consensus 167 l~ 168 (170)
++
T Consensus 135 l~ 136 (136)
T 1lu4_A 135 TS 136 (136)
T ss_dssp --
T ss_pred hC
Confidence 64
No 75
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.95 E-value=2.7e-27 Score=167.96 Aligned_cols=145 Identities=17% Similarity=0.157 Sum_probs=112.0
Q ss_pred ccccCCcccccceeeCC-CC--CeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDA-RG--HEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEE 79 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~-~g--~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~ 79 (170)
..+..|+++|+|++.+. +| +.+++++++||++||+|| ++||++|+.+++.|++++++|+++++++++|++|
T Consensus 3 ~~l~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d----- 77 (197)
T 1qmv_A 3 GNARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVD----- 77 (197)
T ss_dssp TTBCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS-----
T ss_pred CcccCCCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-----
Confidence 34778999999999998 88 999999999999999999 9999999999999999999999889999999987
Q ss_pred CCCChHHHHHHHHhhc-------CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCC
Q 030881 80 EPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~ 152 (170)
+.+...+|++ ++ +.+||++ .|..+.... .|.....+ .+. ..|++||||++|+|++.+.|
T Consensus 78 ---~~~~~~~~~~-~~~~~~~~~~~~~p~l--~D~~~~~~~---~~gv~~~~--~~~---~~P~~~lid~~G~i~~~~~g 143 (197)
T 1qmv_A 78 ---SQFTHLAWIN-TPRKEGGLGPLNIPLL--ADVTRRLSE---DYGVLKTD--EGI---AYRGLFIIDGKGVLRQITVN 143 (197)
T ss_dssp ---CHHHHHHHHT-SCGGGTCCCSCSSCEE--ECTTCHHHH---HTTCEETT--TTE---ECEEEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHHH-HHHhhCCCCCCceEEE--ECCcHHHHH---HcCCccCC--CCc---eeeEEEEECCCCcEEEEEeC
Confidence 5677788886 55 7889988 554332211 11111000 001 34599999999999999776
Q ss_pred CC----CchHHHHHHHHHh
Q 030881 153 TT----SLLSLEHDIKKLL 167 (170)
Q Consensus 153 ~~----~~~~l~~~l~~~l 167 (170)
.. +.+++.+.|+++.
T Consensus 144 ~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 144 DLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp CTTBCCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhcc
Confidence 44 3456777776653
No 76
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.95 E-value=1.5e-27 Score=174.19 Aligned_cols=143 Identities=13% Similarity=0.114 Sum_probs=107.4
Q ss_pred ccccCCcccccceeeCC---CCCeecCCCCCCcEEEEEEec-CCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDA---RGHEVDLSTYKGKVLLIVNVA-SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEE 79 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~---~g~~~~l~~~~gk~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~ 79 (170)
..+..|+++|+|++.+. +|+.++|++++||++||+||+ +||++|..+++.|++++++|+++|+.+|+||.|
T Consensus 46 ~~l~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D----- 120 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVD----- 120 (240)
T ss_dssp CSCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESS-----
T ss_pred CcCCCCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC-----
Confidence 34679999999998754 466999999999999999998 999999999999999999999999999999986
Q ss_pred CCCChHHHHHHHHhhc-------CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCC
Q 030881 80 EPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~ 152 (170)
+.+...+|++ ++ +.+||++ .|..+.... .|+ ... ...|. ..|++||||++|+|++.+.+
T Consensus 121 ---~~~~~~~~~~-~~~~~~~~~~~~fp~l--~D~~~~v~~-~yg--v~~--~~~g~---~~p~~flID~~G~I~~~~~~ 186 (240)
T 3qpm_A 121 ---SQFTHLAWII-TPRKQGGLGPMKIPLL--SDLTHQISK-DYG--VYL--EDQGH---TLRGLFIIDEKGVLRQITMN 186 (240)
T ss_dssp ---CHHHHHHHHH-SCGGGTCCCSCSSCEE--ECTTSHHHH-HTT--CEE--TTTTE---ECEEEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHHH-HHHhhcCCCCCceeEE--eCchHHHHH-HhC--Ccc--ccCCC---ccceEEEEcCCCeEEEEEec
Confidence 6778888886 54 7889988 565432221 111 100 00011 24599999999999999665
Q ss_pred CCC----chHHHHHHHH
Q 030881 153 TTS----LLSLEHDIKK 165 (170)
Q Consensus 153 ~~~----~~~l~~~l~~ 165 (170)
... .+++.+.|++
T Consensus 187 ~~~~~~~~~eil~~l~~ 203 (240)
T 3qpm_A 187 DLPVGRSVDETLRLVQA 203 (240)
T ss_dssp CTTBCCCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHH
Confidence 333 3445555544
No 77
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.94 E-value=1.9e-27 Score=164.00 Aligned_cols=133 Identities=14% Similarity=0.129 Sum_probs=104.2
Q ss_pred ccCCcccccceee--CCCC--CeecCCC-CCCcEEEEEEe-cCCCCCCh-hhHHHHHHHHHHhccCCcE-EEEeecCCCC
Q 030881 6 IQNPESIFDLSVK--DARG--HEVDLST-YKGKVLLIVNV-ASKCGMTN-SNYIELSQLYDKYKDQGLE-ILAFPCNQFG 77 (170)
Q Consensus 6 ~~~g~~~p~f~l~--~~~g--~~~~l~~-~~gk~~lv~f~-~~~C~~C~-~~~~~l~~~~~~~~~~~v~-~v~is~d~~~ 77 (170)
+..|+++|+|++. +.+| +.+++++ ++||++||+|| ++||++|. .+++.|++++++++++|++ +++||.|
T Consensus 4 ~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d--- 80 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN--- 80 (162)
T ss_dssp CCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESS---
T ss_pred CCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC---
Confidence 7899999999986 8999 9999999 89999999999 89999999 9999999999999989999 9999986
Q ss_pred CCCCCChHHHHHHHHhhcCC--CCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC
Q 030881 78 EEEPGSNDQIADFVCTRFKS--EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (170)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~--~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~ 153 (170)
+.+.+++|.+ +++. +||++ .|.++.... .|+ ........|.++.+.|++|||| +|+|++.+.+.
T Consensus 81 -----~~~~~~~~~~-~~~~~~~~~~l--~D~~~~~~~-~~g--v~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 81 -----DPFVMKAWAK-SYPENKHVKFL--ADGSATYTH-ALG--LELDLQEKGLGTRSRRFALLVD-DLKVKAANIEG 146 (162)
T ss_dssp -----CHHHHHHHHH-TCTTCSSEEEE--ECTTSHHHH-HTT--CEEEETTTTSEEEECCEEEEEE-TTEEEEEEECS
T ss_pred -----CHHHHHHHHH-hcCCCCCeEEE--ECCCchHHH-HcC--cccccccCCCCccceeEEEEEE-CCEEEEEEeeC
Confidence 6788999997 7788 89998 565433222 111 1100000111112345999999 99999998765
No 78
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.94 E-value=1.9e-26 Score=153.35 Aligned_cols=136 Identities=16% Similarity=0.252 Sum_probs=111.4
Q ss_pred ccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHH
Q 030881 11 SIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADF 90 (170)
Q Consensus 11 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~ 90 (170)
++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.++++++++. .++.+++|+.+... ..++.+.+.++
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~v~i~~~~~~--~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAG-DDYVVLTVVSPGHK--GEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT-TTEEEEEEECTTST--TCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC-CCcEEEEEEcCCCC--chhhHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999954 46999999654321 24688999999
Q ss_pred HHhhcCC-CCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHH
Q 030881 91 VCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 166 (170)
Q Consensus 91 ~~~~~~~-~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~ 166 (170)
.+ +++. +||++ .|....... . +++...|++++||++|+|++.+.|..+.+++.+.|+++
T Consensus 78 ~~-~~~~~~~~~~--~d~~~~~~~---~-----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 78 YK-GLDYKNLPVL--VDPSGKLLE---T-----------YGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HT-TCCCTTCCEE--ECTTCHHHH---H-----------TTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred Hh-hcCCCCeeEE--ECcchHHHH---H-----------cCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 97 7788 89988 454332111 1 34455569999999999999999988988899888765
No 79
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.94 E-value=5.3e-27 Score=172.49 Aligned_cols=143 Identities=12% Similarity=0.093 Sum_probs=107.8
Q ss_pred ccccCCcccccceeeC---CCCCeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCC
Q 030881 4 QFIQNPESIFDLSVKD---ARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEE 79 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~---~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~ 79 (170)
..+..|+++|+|++.+ .+|+.++|++++||++||+|| ++||++|..+++.|++++++|+++|+.+|+||+|
T Consensus 60 ~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D----- 134 (254)
T 3tjj_A 60 SKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD----- 134 (254)
T ss_dssp CCCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESS-----
T ss_pred cccCCCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCC-----
Confidence 4567999999999774 467899999999999999999 8999999999999999999999999999999986
Q ss_pred CCCChHHHHHHHHhhc-------CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCC
Q 030881 80 EPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP 152 (170)
Q Consensus 80 ~~~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~ 152 (170)
+.+...+|++ ++ +++||++ .|..+.... .|..... ..|. ..|++||||++|+|++.+.+
T Consensus 135 ---~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~va~---~ygv~~~--~~g~---~~p~tflID~~G~I~~~~~~ 200 (254)
T 3tjj_A 135 ---SQFTHLAWIN-TPRRQGGLGPIRIPLL--SDLTHQISK---DYGVYLE--DSGH---TLRGLFIIDDKGILRQITLN 200 (254)
T ss_dssp ---CHHHHHHHHT-SCGGGTSCCSCSSCEE--ECTTSHHHH---HHTCEET--TTTE---ECEEEEEECTTSBEEEEEEE
T ss_pred ---CHHHHHHHHH-HHHHhcCCccccccee--eCcHHHHHH---HcCCccc--cCCC---ccceEEEECCCCeEEEEEec
Confidence 6778888886 54 6889998 565433222 1211100 0011 23499999999999999665
Q ss_pred CC----CchHHHHHHHH
Q 030881 153 TT----SLLSLEHDIKK 165 (170)
Q Consensus 153 ~~----~~~~l~~~l~~ 165 (170)
.. +.+++.+.|++
T Consensus 201 ~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 201 DLPVGRSVDETLRLVQA 217 (254)
T ss_dssp CTTCCCCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHh
Confidence 33 23445555543
No 80
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.94 E-value=6e-27 Score=160.48 Aligned_cols=135 Identities=17% Similarity=0.275 Sum_probs=109.4
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
..+..|.++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|+++++++++.++.+++|+.|.
T Consensus 13 ~~~~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~-------- 84 (158)
T 3hdc_A 13 PLVRTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK-------- 84 (158)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS--------
T ss_pred cccCCCCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH--------
Confidence 457799999999999999999999999999999999999999999999999999999998889999999872
Q ss_pred hHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCc--hHHHH
Q 030881 84 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSL--LSLEH 161 (170)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~--~~l~~ 161 (170)
++.++.+ +++.+||++ .|....... . +++...|++||||++|+|++++.|..+. .++.+
T Consensus 85 --~~~~~~~-~~~~~~~~~--~d~~~~~~~---~-----------~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~ 145 (158)
T 3hdc_A 85 --RFPEKYR-RAPVSFNFL--SDATGQVQQ---R-----------YGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVS 145 (158)
T ss_dssp --SCCGGGG-GCCCSCEEE--ECTTSHHHH---H-----------TTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHH
T ss_pred --HHHHHHH-HcCCCceEE--ECchHHHHH---H-----------hCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHH
Confidence 4556775 778999988 454332111 1 3444556999999999999998886543 34555
Q ss_pred HHHH
Q 030881 162 DIKK 165 (170)
Q Consensus 162 ~l~~ 165 (170)
.+++
T Consensus 146 ~~~~ 149 (158)
T 3hdc_A 146 YLKS 149 (158)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 5544
No 81
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.94 E-value=1.9e-27 Score=167.13 Aligned_cols=146 Identities=14% Similarity=0.094 Sum_probs=109.4
Q ss_pred cccCCcccccceeeCC--CC-CeecCCC-CCCcEE-EEEEecCCCCCChh-hHHHHHHHHHHhccCCcE-EEEeecCCCC
Q 030881 5 FIQNPESIFDLSVKDA--RG-HEVDLST-YKGKVL-LIVNVASKCGMTNS-NYIELSQLYDKYKDQGLE-ILAFPCNQFG 77 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~--~g-~~~~l~~-~~gk~~-lv~f~~~~C~~C~~-~~~~l~~~~~~~~~~~v~-~v~is~d~~~ 77 (170)
.+..|+++|+|++.+. +| +.+++++ ++||++ |++||++|||+|.. ++|.|++++++|+++|+. +++||.|
T Consensus 25 ~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d--- 101 (184)
T 3uma_A 25 TIAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN--- 101 (184)
T ss_dssp CCCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS---
T ss_pred cCCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC---
Confidence 4789999999999998 99 9999999 899855 55567999999999 799999999999999999 9999986
Q ss_pred CCCCCChHHHHHHHHhhcCCC--CCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCC-
Q 030881 78 EEEPGSNDQIADFVCTRFKSE--FPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT- 154 (170)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~--~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~- 154 (170)
+.+..++|++ +++++ ||++ .|.++.... .|.....+...|.+++..|++|||+ +|+|++.+.+..
T Consensus 102 -----~~~~~~~f~~-~~~~~~~fp~l--~D~~~~va~---~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~~~ 169 (184)
T 3uma_A 102 -----DLHVMGAWAT-HSGGMGKIHFL--SDWNAAFTK---AIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIEESP 169 (184)
T ss_dssp -----CHHHHHHHHH-HHTCTTTSEEE--ECTTCHHHH---HTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEECSST
T ss_pred -----CHHHHHHHHH-HhCCCCceEEE--EcCchHHHH---HcCCceeccccCCcccceeEEEEEC-CCEEEEEEEeCCC
Confidence 6788899987 77888 9999 666544332 1211111111112233455899996 999999986643
Q ss_pred ---CchHHHHHHHH
Q 030881 155 ---SLLSLEHDIKK 165 (170)
Q Consensus 155 ---~~~~l~~~l~~ 165 (170)
+..+.++.|++
T Consensus 170 g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 170 GQATASGAAAMLEL 183 (184)
T ss_dssp TCCSTTSHHHHHHH
T ss_pred CCCcCCCHHHHHhh
Confidence 23445555554
No 82
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.94 E-value=1.2e-26 Score=167.77 Aligned_cols=150 Identities=13% Similarity=0.123 Sum_probs=108.9
Q ss_pred cccCCcccccceeeCCCCCeecCCCCCCc--EEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCC
Q 030881 5 FIQNPESIFDLSVKDARGHEVDLSTYKGK--VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk--~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~ 82 (170)
.+..|+++|+|++.+.+| .+++++++|| .+|++||++||++|..+++.|++++++|+++|+++|+||+|
T Consensus 4 ~l~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D-------- 74 (224)
T 1prx_A 4 GLLLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSID-------- 74 (224)
T ss_dssp -CCTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESS--------
T ss_pred cCCCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCC--------
Confidence 478999999999999999 9999999887 45666689999999999999999999999999999999997
Q ss_pred ChHHHHHHHHh-----h----cCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC
Q 030881 83 SNDQIADFVCT-----R----FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (170)
Q Consensus 83 ~~~~~~~~~~~-----~----~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~ 153 (170)
+.+...+|.+. . ++++||++ .|..+..+. .|+.......+..|. .-..|++||||++|+|++.+.+.
T Consensus 75 ~~~~~~~~~~~i~~~~~~~~~~~~~fpil--~D~~~~va~-~ygv~~~~~~~~~g~-~~~~p~~fiID~~G~I~~~~~~~ 150 (224)
T 1prx_A 75 SVEDHLAWSKDINAYNSEEPTEKLPFPII--DDRNRELAI-LLGMLDPAEKDEKGM-PVTARVVFVFGPDKKLKLSILYP 150 (224)
T ss_dssp CHHHHHHHHHHHHHHTTSCCCSCCSSCEE--ECTTCHHHH-HTTSSCSCTTCSSSC-CTTCCEEEEECTTSBEEEEEECC
T ss_pred CHHHHHHHHHHHHHhhCcccccCcCccee--ecCchHHHH-HhCCCCcccccCCCc-cccceEEEEECCCCEEEEEEecC
Confidence 55666777752 1 68899999 564433222 122110000000010 11245999999999999997543
Q ss_pred C----CchHHHHHHHHHh
Q 030881 154 T----SLLSLEHDIKKLL 167 (170)
Q Consensus 154 ~----~~~~l~~~l~~~l 167 (170)
. +.+++.+.|+++.
T Consensus 151 ~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 151 ATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp TTBCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 2 4567777777664
No 83
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.94 E-value=6.5e-27 Score=160.81 Aligned_cols=139 Identities=17% Similarity=0.143 Sum_probs=112.0
Q ss_pred CcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHH
Q 030881 9 PESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIA 88 (170)
Q Consensus 9 g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~ 88 (170)
|..+| ++.+.+|+.+++++++||++||+||++||++|+.+.|.|++++++++..++.+|+|++|... ..++.+++.
T Consensus 17 ~~~~p--~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~--~~~~~~~~~ 92 (164)
T 2h30_A 17 PHTMS--TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFL--HEKKDGEFQ 92 (164)
T ss_dssp HHHHT--TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTST--TCCCTTHHH
T ss_pred CCcCC--ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCc--cccCHHHHH
Confidence 34444 88899999999999999999999999999999999999999999998889999999997432 234677888
Q ss_pred HHHHhhcCCC-CCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 89 DFVCTRFKSE-FPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 89 ~~~~~~~~~~-~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+|.. +++.. +++. .|....... . +++...|++||||++|++++.+.|..+.+++.+.|++++
T Consensus 93 ~~~~-~~~~~~~~~~--~d~~~~~~~---~-----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 93 KWYA-GLNYPKLPVV--TDNGGTIAQ---N-----------LNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp HHHT-TSCCTTSCEE--ECTTCHHHH---H-----------TTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred HHHH-hCCCCcceEE--EcCchHHHH---H-----------cCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 8886 55666 6766 443322111 1 234445599999999999999999889999999999887
Q ss_pred c
Q 030881 168 G 168 (170)
Q Consensus 168 ~ 168 (170)
+
T Consensus 156 ~ 156 (164)
T 2h30_A 156 A 156 (164)
T ss_dssp C
T ss_pred H
Confidence 5
No 84
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.94 E-value=1.5e-26 Score=159.81 Aligned_cols=137 Identities=17% Similarity=0.218 Sum_probs=112.5
Q ss_pred cccCCcccccceeeCC--CCCeecCCCC-CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCC
Q 030881 5 FIQNPESIFDLSVKDA--RGHEVDLSTY-KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEP 81 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~--~g~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~ 81 (170)
.+..|+++|+|++.+. +|+.++++++ +||++||+||++||++|+.+.|.|++++++ ++.+++|+++.
T Consensus 21 ~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~------ 90 (168)
T 2b1k_A 21 SALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKD------ 90 (168)
T ss_dssp CTTTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESC------
T ss_pred ccccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCC------
Confidence 4578999999999999 9999999985 999999999999999999999999998876 69999999873
Q ss_pred CChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHH
Q 030881 82 GSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEH 161 (170)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~ 161 (170)
+.+.+.+|.+ +++.+||.+. .|...... ..| ++...|++|+||++|+|++.+.|..+.+.+.+
T Consensus 91 -~~~~~~~~~~-~~~~~~~~~~-~d~~~~~~---~~~-----------~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~ 153 (168)
T 2b1k_A 91 -DRQKAISWLK-ELGNPYALSL-FDGDGMLG---LDL-----------GVYGAPETFLIDGNGIIRYRHAGDLNPRVWEE 153 (168)
T ss_dssp -CHHHHHHHHH-HHCCCCSEEE-EETTCHHH---HHH-----------TCCSSSEEEEECTTSBEEEEEESCCCHHHHHH
T ss_pred -ChHHHHHHHH-HcCCCCceee-ECcchHHH---HHc-----------CccccCEEEEECCCCeEEEEEeCCCCHHHHHH
Confidence 7788999987 7799998532 34332211 122 23344599999999999999999888988888
Q ss_pred HHHHHhc
Q 030881 162 DIKKLLG 168 (170)
Q Consensus 162 ~l~~~l~ 168 (170)
.|+++++
T Consensus 154 ~l~~~l~ 160 (168)
T 2b1k_A 154 EIKPLWE 160 (168)
T ss_dssp TTHHHHH
T ss_pred HHHHHHH
Confidence 8888764
No 85
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.94 E-value=1e-26 Score=161.93 Aligned_cols=146 Identities=16% Similarity=0.178 Sum_probs=108.7
Q ss_pred ccccCCcccccceee-CCCCCeecCCC-CCCcEEEEE-EecCCCCCCh-hhHHHHHHHHHHhccCCcEEEE-eecCCCCC
Q 030881 4 QFIQNPESIFDLSVK-DARGHEVDLST-YKGKVLLIV-NVASKCGMTN-SNYIELSQLYDKYKDQGLEILA-FPCNQFGE 78 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~-~~~g~~~~l~~-~~gk~~lv~-f~~~~C~~C~-~~~~~l~~~~~~~~~~~v~~v~-is~d~~~~ 78 (170)
..+..|+++|+|+|. +.+|+.++|++ ++||++||+ ||++|||+|. .+++.|++++++|+++|+.+|+ ||.|
T Consensus 13 ~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D---- 88 (173)
T 3mng_A 13 APIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVN---- 88 (173)
T ss_dssp CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS----
T ss_pred CCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCC----
Confidence 457799999999999 99999999999 599966655 5599999999 5999999999999999999997 9986
Q ss_pred CCCCChHHHHHHHHhhcCCC--CCceEEeecCCCCchhHHHHhHhccC---CccCCccccCceeEEECCCCcEEEEeCCC
Q 030881 79 EEPGSNDQIADFVCTRFKSE--FPIFEKIDVNGEHASPLYKLLKSGKW---GIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~--~p~~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~i~~~p~~~lid~~G~i~~~~~~~ 153 (170)
+.+..++|++ +++.+ ||++ .|..+..+. .|...... +..| .....|++|||| +|+|++.+.+.
T Consensus 89 ----~~~~~~~f~~-~~~~~~~fp~l--~D~~~~va~---~yGv~~~~~~~~~~g-~~~~~r~tfvID-dG~I~~~~v~~ 156 (173)
T 3mng_A 89 ----DAFVTGEWGR-AHKAEGKVRLL--ADPTGAFGK---ETDLLLDDSLVSIFG-NRRLKRFSMVVQ-DGIVKALNVEP 156 (173)
T ss_dssp ----CHHHHHHHHH-HTTCTTTCEEE--ECTTCHHHH---HHTCBCCSTTHHHHS-SCCBCCEEEEEE-TTEEEEEEECT
T ss_pred ----CHHHHHHHHH-HhCCCCceEEE--ECCChHHHH---HhCCCcccccccccC-CcceEEEEEEEE-CCEEEEEEEeC
Confidence 6788899997 77887 9999 666544332 22111100 0011 122345999999 99999997664
Q ss_pred C----CchHHHHHHHH
Q 030881 154 T----SLLSLEHDIKK 165 (170)
Q Consensus 154 ~----~~~~l~~~l~~ 165 (170)
. +..+.++.|++
T Consensus 157 ~~~g~~~~~~~~vl~~ 172 (173)
T 3mng_A 157 DGTGLTCSLAPNIISQ 172 (173)
T ss_dssp TSSCSSTTSHHHHHHH
T ss_pred CCCCcchHHHHHHHHh
Confidence 3 23445555544
No 86
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=1.5e-28 Score=168.58 Aligned_cols=141 Identities=17% Similarity=0.279 Sum_probs=112.7
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHH-HHHHhc-cCCcEEEEeecCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQ-LYDKYK-DQGLEILAFPCNQFGEEEP 81 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~-~~~~~~-~~~v~~v~is~d~~~~~~~ 81 (170)
..+..|.++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++ ++++++ +.++.+++|++|.
T Consensus 5 ~~l~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~------ 78 (159)
T 2ls5_A 5 YIVRIGEMAPDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDE------ 78 (159)
Confidence 45779999999999999999999999999999999999999999999999998 999998 6789999999873
Q ss_pred CChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHH
Q 030881 82 GSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEH 161 (170)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~ 161 (170)
+.+.+++|.+ +++.+||++ .|..+.... .|.. .+...|++||||++|+|++.+.| .+++++.+
T Consensus 79 -~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~-~~~~-----------~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~ 141 (159)
T 2ls5_A 79 -PLEKVLAFAK-STGVTYPLG--LDPGADIFA-KYAL-----------RDAGITRNVLIDREGKIVKLTRL-YNEEEFAS 141 (159)
Confidence 4567788886 789999998 454433222 1111 11223499999999999999877 45666777
Q ss_pred HHHHHh
Q 030881 162 DIKKLL 167 (170)
Q Consensus 162 ~l~~~l 167 (170)
.|+++.
T Consensus 142 ~l~~l~ 147 (159)
T 2ls5_A 142 LVQQIN 147 (159)
Confidence 776654
No 87
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.94 E-value=1e-26 Score=161.11 Aligned_cols=132 Identities=11% Similarity=0.160 Sum_probs=102.9
Q ss_pred ccCCcccccceee-CCCCCeecCCCC-CCcEEEEEEe-cCCCCCChh-hHHHHHHHHHHhccCCc-EEEEeecCCCCCCC
Q 030881 6 IQNPESIFDLSVK-DARGHEVDLSTY-KGKVLLIVNV-ASKCGMTNS-NYIELSQLYDKYKDQGL-EILAFPCNQFGEEE 80 (170)
Q Consensus 6 ~~~g~~~p~f~l~-~~~g~~~~l~~~-~gk~~lv~f~-~~~C~~C~~-~~~~l~~~~~~~~~~~v-~~v~is~d~~~~~~ 80 (170)
+..|+++|+|++. +.+|+.++|+++ +||++||+|| ++|||+|.. ++|.|++++++|+++|+ .+++||.|
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d------ 76 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVN------ 76 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESS------
T ss_pred CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCC------
Confidence 6789999999999 999999999998 9999999886 999999999 99999999999999999 99999986
Q ss_pred CCChHHHHHHHHhhcCCC--CCceEEeecCCCCchhHHHHhHhcc-CCccCCccccCceeEEECCCCcEEEEeCCC
Q 030881 81 PGSNDQIADFVCTRFKSE--FPIFEKIDVNGEHASPLYKLLKSGK-WGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~--~p~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~i~~~p~~~lid~~G~i~~~~~~~ 153 (170)
+.+.+++|++ +++++ ||++ .|..+.... .|..... +..+| .....|++||| ++|+|++.+.+.
T Consensus 77 --~~~~~~~~~~-~~~~~~~fp~l--~D~~~~~~~---~~gv~~~~~~~~g-~~~~~p~t~lI-~~G~I~~~~~~~ 142 (167)
T 2wfc_A 77 --DSFVMDAWGK-AHGADDKVQML--ADPGGAFTK---AVDMELDLSAVLG-NVRSKRYSLVI-EDGVVTKVNVEP 142 (167)
T ss_dssp --CHHHHHHHHH-HTTCTTTSEEE--ECTTSHHHH---HTTCEECCHHHHS-SCEECCEEEEE-ETTEEEEEEECT
T ss_pred --CHHHHHHHHH-hcCCCcceEEE--ECCCCcHHH---HcCCccccccccC-cccceEEEEEE-eCCEEEEEEecC
Confidence 6788899997 77888 9998 565433222 1111100 00000 01123599999 999999997654
No 88
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.94 E-value=1.6e-26 Score=157.49 Aligned_cols=139 Identities=17% Similarity=0.214 Sum_probs=110.6
Q ss_pred ccccCCcccccceeeCCCC--------CeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCC
Q 030881 4 QFIQNPESIFDLSVKDARG--------HEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQ 75 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g--------~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~ 75 (170)
..+..|.++|+|++.+.+| +.+++++++||++||+||++||++|..+.+.|++++++ .++.+++|+++
T Consensus 6 ~~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~~- 81 (156)
T 1kng_A 6 PSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGINYK- 81 (156)
T ss_dssp ------CBCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEEES-
T ss_pred hhHHhCCCCCCceeeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEECC-
Confidence 3467899999999999999 99999999999999999999999999999999998876 34999999987
Q ss_pred CCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCC
Q 030881 76 FGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTS 155 (170)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~ 155 (170)
++.+.+.+|.+ +++.+||.+. .|...... .. +++...|++|+||++|++++.+.|..+
T Consensus 82 ------~~~~~~~~~~~-~~~~~~~~~~-~d~~~~~~---~~-----------~~v~~~P~~~~id~~G~i~~~~~g~~~ 139 (156)
T 1kng_A 82 ------DAADNARRFLG-RYGNPFGRVG-VDANGRAS---IE-----------WGVYGVPETFVVGREGTIVYKLVGPIT 139 (156)
T ss_dssp ------CCHHHHHHHHH-HHCCCCSEEE-EETTSHHH---HH-----------TTCCSSCEEEEECTTSBEEEEEESCCC
T ss_pred ------CCHHHHHHHHH-HcCCCCceee-eCchhHHH---Hh-----------cCcCccCeEEEEcCCCCEEEEEeCCCC
Confidence 37889999997 7799999432 44332211 11 234445599999999999999999888
Q ss_pred chHHHHHHHHHhc
Q 030881 156 LLSLEHDIKKLLG 168 (170)
Q Consensus 156 ~~~l~~~l~~~l~ 168 (170)
.+++.+.|+++++
T Consensus 140 ~~~l~~~l~~~l~ 152 (156)
T 1kng_A 140 PDNLRSVLLPQME 152 (156)
T ss_dssp HHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8889888888775
No 89
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.94 E-value=2e-26 Score=167.41 Aligned_cols=149 Identities=13% Similarity=0.196 Sum_probs=110.3
Q ss_pred ccCCcccccceeeCCCCCeecCCCCCCc-EEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCC
Q 030881 6 IQNPESIFDLSVKDARGHEVDLSTYKGK-VLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~~gk-~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~ 83 (170)
+..|+++|+|++.+.+| .+++++++|| ++||+|| ++||++|..+++.|++++++|+++|+++|+||+| +
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D--------~ 73 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCD--------N 73 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS--------C
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCC--------C
Confidence 67899999999999999 8999999997 9999998 8999999999999999999999999999999997 5
Q ss_pred hHHHHHHHHh-----hc--CCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCC--
Q 030881 84 NDQIADFVCT-----RF--KSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT-- 154 (170)
Q Consensus 84 ~~~~~~~~~~-----~~--~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~-- 154 (170)
.+...+|++. ++ +++||++ .|..+..+. .|+.......+..|. ....|++||||++|+|++.+.+..
T Consensus 74 ~~~~~~~~~~i~~~~~~~~~~~fpil--~D~~~~va~-~ygv~~~~~~~~~g~-~~~~p~~fiID~~G~I~~~~~~~~~~ 149 (233)
T 2v2g_A 74 VADHKEWSEDVKCLSGVKGDMPYPII--ADETRELAV-KLGMVDPDERTSTGM-PLTCRAVFIIGPDKKLKLSILYPATT 149 (233)
T ss_dssp HHHHHHHHHHHHHHHTCCSSCSSCEE--ECTTCHHHH-HTTCEEEEEECTTCC-EEECEEEEEECTTSBEEEEEEECTTB
T ss_pred HHHHHHHHHHHHHhhCcccCCceEEE--ECChHHHHH-HhCCcCcccccCCCc-ccccceEEEECCCCEEEEEEecCCCC
Confidence 6667777752 45 7899999 565433222 121110000000000 012459999999999999975422
Q ss_pred --CchHHHHHHHHHh
Q 030881 155 --SLLSLEHDIKKLL 167 (170)
Q Consensus 155 --~~~~l~~~l~~~l 167 (170)
+.+++.+.|+++.
T Consensus 150 gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 150 GRNFSEILRVIDSLQ 164 (233)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 4566777777654
No 90
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.93 E-value=2e-25 Score=160.31 Aligned_cols=143 Identities=13% Similarity=0.128 Sum_probs=108.4
Q ss_pred ccccCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCC-CCCCh-----hhHHHHHHHHHHhccCCcEEEEeecCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASK-CGMTN-----SNYIELSQLYDKYKDQGLEILAFPCNQFG 77 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~-C~~C~-----~~~~~l~~~~~~~~~~~v~~v~is~d~~~ 77 (170)
..+..|+++|+|+|.+.+|+.++|++++||++||+||++| ||+|. .+++.|+++ + +|+.|++||.|
T Consensus 20 ~~l~vG~~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~D--- 91 (224)
T 3keb_A 20 DFPRKGDYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVD--- 91 (224)
T ss_dssp CCCCTTCBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESS---
T ss_pred CcCCCCCCCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECC---
Confidence 4578999999999999999999999999999999999887 99999 888888877 5 67999999986
Q ss_pred CCCCCChHHHHHHHHhhcCC-CCCceEEeecC-CCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCC---
Q 030881 78 EEEPGSNDQIADFVCTRFKS-EFPIFEKIDVN-GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP--- 152 (170)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~-~~p~~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~--- 152 (170)
+....++|++ ++++ +||++ .|.. +... ..|+...... ...|.. .|++||||++|+|++.+..
T Consensus 92 -----s~~~~~~f~~-~~gl~~fplL--sD~~~~~va-k~yGv~~~~~-~~~G~~---~p~tfvID~dG~I~~~~~~~~~ 158 (224)
T 3keb_A 92 -----SPSSLARARH-EHGLPNIALL--STLRGRDFH-KRYGVLITEY-PLSGYT---SPAIILADAANVVHYSERLANT 158 (224)
T ss_dssp -----CHHHHHHHHH-HHCCTTCEEE--ESTTCTTHH-HHTTCBCCST-TSTTCB---CCEEEEECTTCBEEEEEECSBT
T ss_pred -----CHHHHHHHHH-HcCCCCceEE--EcCCchHHH-HHhCCccccc-cccCCc---cCEEEEEcCCCEEEEEEecCCC
Confidence 7888999997 7788 79999 6653 3322 2222111000 011112 3499999999999998542
Q ss_pred --CCCchHHHHHHHHHh
Q 030881 153 --TTSLLSLEHDIKKLL 167 (170)
Q Consensus 153 --~~~~~~l~~~l~~~l 167 (170)
..+.+++.+.|+.+.
T Consensus 159 ~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 159 RDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp TCCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhh
Confidence 345667777777664
No 91
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.93 E-value=3e-26 Score=165.31 Aligned_cols=149 Identities=15% Similarity=0.221 Sum_probs=108.0
Q ss_pred ccCCcccccceeeCC--CCCeecCCCCCCc-EEE-EEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCC
Q 030881 6 IQNPESIFDLSVKDA--RGHEVDLSTYKGK-VLL-IVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEP 81 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~--~g~~~~l~~~~gk-~~l-v~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~ 81 (170)
+..|+++|+|++.+. +| .+++++++|| ++| ++||++||++|..+++.|++++++|+++|+++|+||+|
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D------- 74 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCN------- 74 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESS-------
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCC-------
Confidence 678999999999999 99 8999999998 554 45589999999999999999999999999999999997
Q ss_pred CChHHHHHHHH------hhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC--
Q 030881 82 GSNDQIADFVC------TRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT-- 153 (170)
Q Consensus 82 ~~~~~~~~~~~------~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~-- 153 (170)
+.+...+|.+ .+++++||++ .|..+..+. .|+.......+..|. ....|++||||++|+|++.+.+.
T Consensus 75 -~~~~~~~~~~~i~~~~~~~~~~fpil--~D~~~~va~-~ygv~~~~~~~~~g~-~~~~p~~flID~~G~I~~~~~~~~~ 149 (220)
T 1xcc_A 75 -SKESHDKWIEDIKYYGKLNKWEIPIV--CDESRELAN-KLKIMDEQEKDITGL-PLTCRCLFFISPEKKIKATVLYPAT 149 (220)
T ss_dssp -CHHHHHHHHHHHHHHHTCSCCCCCEE--ECTTSHHHH-HHTCEEEEEECTTSC-EEECEEEEEECTTSBEEEEEEECTT
T ss_pred -CHHHHHHHHHHHHHHhcCCCCcceeE--ECchhHHHH-HhCCCCcccccCCCC-CcccceEEEECCCCEEEEEEecCCC
Confidence 4556666664 2478899999 565443222 222110000000000 01245999999999999997532
Q ss_pred --CCchHHHHHHHHHh
Q 030881 154 --TSLLSLEHDIKKLL 167 (170)
Q Consensus 154 --~~~~~l~~~l~~~l 167 (170)
.+.+++.+.|+++.
T Consensus 150 ~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 150 TGRNAHEILRVLKSLQ 165 (220)
T ss_dssp BCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 35667777777664
No 92
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.93 E-value=8.6e-26 Score=161.50 Aligned_cols=146 Identities=16% Similarity=0.195 Sum_probs=111.2
Q ss_pred cccccCCcccccce----eeCCCCCeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCC
Q 030881 3 SQFIQNPESIFDLS----VKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFG 77 (170)
Q Consensus 3 ~~~~~~g~~~p~f~----l~~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~ 77 (170)
...+..|++||+|+ +.|.+|+.++|++++||++||+|| +.||+.|..++..|++.+++|++.|+++++||.|
T Consensus 23 ~~~~~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~D--- 99 (219)
T 3tue_A 23 CGNAKINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSID--- 99 (219)
T ss_dssp -CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESS---
T ss_pred ccccccCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCC---
Confidence 34467999999999 457788999999999999999999 7999999999999999999999999999999997
Q ss_pred CCCCCChHHHHHHHHhh------cCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeC
Q 030881 78 EEEPGSNDQIADFVCTR------FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY 151 (170)
Q Consensus 78 ~~~~~~~~~~~~~~~~~------~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~ 151 (170)
+.....+|..+. .+++||++ .|..+.... .|++... ..|...+ .+||||++|+|++.+.
T Consensus 100 -----s~~sh~~w~~~~~~~~~~~~l~fpll--sD~~~~va~-~yGv~~~----~~g~~~R---~tFiIDp~g~Ir~~~~ 164 (219)
T 3tue_A 100 -----SEYAHLQWTLQDRKKGGLGTMAIPIL--ADKTKNIAR-SYGVLEE----SQGVAYR---GLFIIDPHGMLRQITV 164 (219)
T ss_dssp -----CHHHHHHHHHSCGGGTCCCSCSSCEE--ECTTSHHHH-HTTCEET----TTTEECE---EEEEECTTSBEEEEEE
T ss_pred -----chhhHHHHhhhhHHhcCccccccccc--cCcccHHHH-HcCCccc----CCCeeEE---EEEEECCCCeEEEEEE
Confidence 778888887532 25789999 676655433 2332211 1123344 8899999999999852
Q ss_pred -CC---CCchHHHHHHHHH
Q 030881 152 -PT---TSLLSLEHDIKKL 166 (170)
Q Consensus 152 -~~---~~~~~l~~~l~~~ 166 (170)
.. .+.+++.+.|+++
T Consensus 165 ~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 165 NDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp ECTTCCCCHHHHHHHHHHH
T ss_pred ecCCCCCCHHHHHHHHHHh
Confidence 22 2445555555544
No 93
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.5e-25 Score=159.93 Aligned_cols=143 Identities=17% Similarity=0.230 Sum_probs=108.8
Q ss_pred ccCCcccccceee---CCCCCeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCC
Q 030881 6 IQNPESIFDLSVK---DARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEP 81 (170)
Q Consensus 6 ~~~g~~~p~f~l~---~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~ 81 (170)
+.+|++||+|++. |.++++++|++++||++||+|| +.||++|..+++.|++.+++|++.|+++++||.|
T Consensus 23 ~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~D------- 95 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTD------- 95 (216)
T ss_dssp CCTTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESS-------
T ss_pred hhcCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecC-------
Confidence 5789999999976 5667899999999999999999 8999999999999999999999999999999997
Q ss_pred CChHHHHHHHHhh------cCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC--
Q 030881 82 GSNDQIADFVCTR------FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT-- 153 (170)
Q Consensus 82 ~~~~~~~~~~~~~------~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~-- 153 (170)
+.....+|.... .+++||++ .|..+.... .|+.... ..|...+ .+||||++|+|++.....
T Consensus 96 -s~~sh~aw~~~~~~~~~~~~l~fpll--sD~~~~vak-~YGv~~~----~~g~~~R---~tFiID~~G~Ir~~~v~~~~ 164 (216)
T 3sbc_A 96 -SEYSLLAWTNIPRKEGGLGPINIPLL--ADTNHSLSR-DYGVLIE----EEGVALR---GLFIIDPKGVIRHITINDLP 164 (216)
T ss_dssp -CHHHHHHHHTSCGGGTCCCSCSSCEE--ECTTSHHHH-HHTCEET----TTTEECE---EEEEECTTSBEEEEEEECTT
T ss_pred -chhhHHHHHHHHHHhCCccCcccceE--eCCCCHHHH-HcCCeec----cCCceee---EEEEECCCCeEEEEEEcCCC
Confidence 778888887521 14789999 676655433 2332211 1123344 899999999999984222
Q ss_pred --CCchHHHHHHHHH
Q 030881 154 --TSLLSLEHDIKKL 166 (170)
Q Consensus 154 --~~~~~l~~~l~~~ 166 (170)
.+.+++.+.|+++
T Consensus 165 ~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 165 VGRNVDEALRLVEAF 179 (216)
T ss_dssp BCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHh
Confidence 2445555555543
No 94
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.92 E-value=1e-25 Score=156.60 Aligned_cols=133 Identities=15% Similarity=0.184 Sum_probs=99.0
Q ss_pred cCCcccccceeeCC----CC-----CeecCCCC-CCc-EEEEEEecCCCCCChhh-HHHHHHHHHHhccCCcE-EEEeec
Q 030881 7 QNPESIFDLSVKDA----RG-----HEVDLSTY-KGK-VLLIVNVASKCGMTNSN-YIELSQLYDKYKDQGLE-ILAFPC 73 (170)
Q Consensus 7 ~~g~~~p~f~l~~~----~g-----~~~~l~~~-~gk-~~lv~f~~~~C~~C~~~-~~~l~~~~~~~~~~~v~-~v~is~ 73 (170)
..|.++|+|++.+. +| +.++++++ +|| ++|++||++|||+|+.+ +|.|++++++|+++|+. +++||.
T Consensus 8 ~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~ 87 (171)
T 2pwj_A 8 DILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAI 87 (171)
T ss_dssp --CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEES
T ss_pred cccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 35669999999998 57 89999996 995 67778999999999999 99999999999999999 999998
Q ss_pred CCCCCCCCCChHHHHHHHHhhcCC--CCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeC
Q 030881 74 NQFGEEEPGSNDQIADFVCTRFKS--EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY 151 (170)
Q Consensus 74 d~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~ 151 (170)
| +.+..++|++ ++++ +||++ .|..+.... .|.....+...+.++...|++|+|| +|+|++.+.
T Consensus 88 d--------~~~~~~~~~~-~~~~~~~fp~l--~D~~~~~~~---~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~~ 152 (171)
T 2pwj_A 88 N--------DPYTVNAWAE-KIQAKDAIEFY--GDFDGSFHK---SLELTTDLSAGLLGIRSERWSAYVV-DGKVKALNV 152 (171)
T ss_dssp S--------CHHHHHHHHH-HTTCTTTSEEE--ECTTCHHHH---HHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEEE
T ss_pred C--------CHHHHHHHHH-HhCCCCceEEE--ECCccHHHH---HhCCccccccccCCcccceeEEEEE-CCEEEEEEe
Confidence 6 5678889987 6775 79988 665544332 2221111100111222234789999 999999987
Q ss_pred CCC
Q 030881 152 PTT 154 (170)
Q Consensus 152 ~~~ 154 (170)
+..
T Consensus 153 ~~~ 155 (171)
T 2pwj_A 153 EES 155 (171)
T ss_dssp CSS
T ss_pred ecC
Confidence 653
No 95
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.92 E-value=1.2e-25 Score=164.07 Aligned_cols=135 Identities=18% Similarity=0.189 Sum_probs=104.5
Q ss_pred ccCCcccccceeeCC-CCC--eecCCC-CCCcEEEEEEe-cCCCCCCh-hhHHHHHHHHHHhccCCc-EEEEeecCCCCC
Q 030881 6 IQNPESIFDLSVKDA-RGH--EVDLST-YKGKVLLIVNV-ASKCGMTN-SNYIELSQLYDKYKDQGL-EILAFPCNQFGE 78 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~-~g~--~~~l~~-~~gk~~lv~f~-~~~C~~C~-~~~~~l~~~~~~~~~~~v-~~v~is~d~~~~ 78 (170)
+..|+++|+|++.+. +|+ .+++++ ++||++||+|| ++||++|+ .++|.|++++++|+++|+ .+++||.|
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d---- 78 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVN---- 78 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESS----
T ss_pred ccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcC----
Confidence 568999999999996 787 899999 89999999999 99999999 999999999999999999 99999986
Q ss_pred CCCCChHHHHHHHHhhcCCC-CCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCC
Q 030881 79 EEPGSNDQIADFVCTRFKSE-FPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTS 155 (170)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~-~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~ 155 (170)
+.+.+++|.+ +++.. ||++ .|..+.... .|.....++..|......|++||| ++|+|++.+.+...
T Consensus 79 ----~~~~~~~~~~-~~~~~~~~~l--~D~~~~~~~---~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~~ 145 (241)
T 1nm3_A 79 ----DTFVMNAWKE-DEKSENISFI--PDGNGEFTE---GMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPNE 145 (241)
T ss_dssp ----CHHHHHHHHH-HTTCTTSEEE--ECTTSHHHH---HTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCSC
T ss_pred ----CHHHHHHHHH-hcCCCceEEE--ECCCcHHHH---HhCceeecccccCcccceeEEEEE-ECCEEEEEEEeccC
Confidence 6788899997 77886 9998 565443222 111111111111111133599999 99999999877543
No 96
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.92 E-value=1.4e-25 Score=164.09 Aligned_cols=145 Identities=17% Similarity=0.255 Sum_probs=108.7
Q ss_pred cccCCcccccceeeCCCCCeecC-CCC--CCcEE-EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCC
Q 030881 5 FIQNPESIFDLSVKDARGHEVDL-STY--KGKVL-LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEE 80 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l-~~~--~gk~~-lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~ 80 (170)
++..|+++|+|++.+.+| .+++ +++ +||++ |++||++||++|..+++.|++++++|+++|+++|+||+|
T Consensus 4 ~~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~D------ 76 (249)
T 3a2v_A 4 IPLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVD------ 76 (249)
T ss_dssp ECCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS------
T ss_pred cCCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECC------
Confidence 467899999999999999 7999 999 99975 557899999999999999999999999999999999997
Q ss_pred CCChHHHHHHHHh-----hcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCC-
Q 030881 81 PGSNDQIADFVCT-----RFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT- 154 (170)
Q Consensus 81 ~~~~~~~~~~~~~-----~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~- 154 (170)
+.....+|.+. ..+++||++ .|..+..+. .|+ .. .++ .++...|++||||++|+|++...+..
T Consensus 77 --s~~~~~~w~~~~~~~~~~~i~fPil--~D~~~~ia~-~yg--v~-~~~---~g~~~~p~~fIID~dG~I~~~~~~~~~ 145 (249)
T 3a2v_A 77 --SVFSHIKWKEWIERHIGVRIPFPII--ADPQGTVAR-RLG--LL-HAE---SATHTVRGVFIVDARGVIRTMLYYPME 145 (249)
T ss_dssp --CHHHHHHHHHHHHHHTCCCCCSCEE--ECTTSHHHH-HHT--CC-CTT---CSSSCCEEEEEECTTSBEEEEEEECTT
T ss_pred --CHHHHHHHHHHHHHhcCCCCceeEE--ECCchHHHH-HhC--Cc-ccc---CCCcccceEEEECCCCeEEEEEecCCc
Confidence 45555555541 147889998 565443322 121 11 010 01113459999999999999976543
Q ss_pred ---CchHHHHHHHHHh
Q 030881 155 ---SLLSLEHDIKKLL 167 (170)
Q Consensus 155 ---~~~~l~~~l~~~l 167 (170)
+.+++.+.|+++.
T Consensus 146 ~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 146 LGRLVDEILRIVKALK 161 (249)
T ss_dssp BCCCHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHH
Confidence 5667777777664
No 97
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.91 E-value=1.2e-24 Score=146.62 Aligned_cols=121 Identities=14% Similarity=0.190 Sum_probs=95.3
Q ss_pred cCCccccc-ceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhcc-CCcEEEEeecCCCCCCCCCCh
Q 030881 7 QNPESIFD-LSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD-QGLEILAFPCNQFGEEEPGSN 84 (170)
Q Consensus 7 ~~g~~~p~-f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~v~~v~is~d~~~~~~~~~~ 84 (170)
..++.+|+ |++.+.+|+.+++++++||++||+||++||++|+.++|.|+++++++++ .++.+++|++|. +.
T Consensus 2 ~~~~~~P~~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~-------~~ 74 (144)
T 1i5g_A 2 GLKKFFPYSTNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDE-------SA 74 (144)
T ss_dssp TTTTSCSSCSEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS-------SH
T ss_pred chhhhCCCceEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC-------CH
Confidence 35788999 9999999999999999999999999999999999999999999999985 579999999973 78
Q ss_pred HHHHHHHHhhcCC-CCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEEC-CCCcEEEEe
Q 030881 85 DQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVD-KNGQVVDRY 150 (170)
Q Consensus 85 ~~~~~~~~~~~~~-~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid-~~G~i~~~~ 150 (170)
+.+++|++ +++. ++|+.. .+.. ..+.. . +++...|+++||| ++|+|++++
T Consensus 75 ~~~~~~~~-~~~~~~~~~~~-~d~~----~~~~~-----~-----~~v~~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 75 EDFKDYYA-KMPWLALPFED-RKGM----EFLTT-----G-----FDVKSIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp HHHHHHHT-TCSSEECCTTC-HHHH----HHHHH-----H-----TTCCSSSEEEEEETTTCCEEESC
T ss_pred HHHHHHHH-hCCccccccCc-hHHH----HHHHH-----H-----cCCCCCCEEEEEECCCCcEEecc
Confidence 88999987 5442 455441 0110 11111 0 2344455999999 999999974
No 98
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.90 E-value=6.5e-24 Score=160.88 Aligned_cols=133 Identities=11% Similarity=0.207 Sum_probs=102.3
Q ss_pred cccccceeeCCCCCeecCCCCCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHH
Q 030881 10 ESIFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIA 88 (170)
Q Consensus 10 ~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~ 88 (170)
.++|+|+|.|.+|++++|++++||++||+|| +.|||+|..+++.|++ ...+++++++||.| +.+..+
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~D--------~~~~~~ 69 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISRD--------SVEALK 69 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEESC--------CHHHHH
T ss_pred CCCCCcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeCC--------CHHHHH
Confidence 4799999999999999999999999999999 5799999999988864 23357999999986 788899
Q ss_pred HHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCc---hHHHHHHHH
Q 030881 89 DFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSL---LSLEHDIKK 165 (170)
Q Consensus 89 ~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~---~~l~~~l~~ 165 (170)
+|++ +++++||++ .|.++.... .|+ ....+ ..+| ++||||++|+|++.+.+.... +++.+.|++
T Consensus 70 ~f~~-~~~l~fp~l--~D~~~~v~~-~yg--v~~~~----~~~r---~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~ 136 (322)
T 4eo3_A 70 RFKE-KNDLKVTLL--SDPEGILHE-FFN--VLENG----KTVR---STFLIDRWGFVRKEWRRVKVEGHVQEVKEALDR 136 (322)
T ss_dssp HHHH-HHTCCSEEE--ECTTCHHHH-HTT--CEETT----EECC---EEEEECTTSBEEEEEESCCSTTHHHHHHHHHHH
T ss_pred HHHH-hhCCceEEE--EcCchHHHH-hcC--CCCCC----cCcc---EEEEECCCCEEEEEEeCCCccccHHHHHHHHhh
Confidence 9997 889999999 666554332 122 11111 2344 999999999999998775543 445555555
Q ss_pred Hh
Q 030881 166 LL 167 (170)
Q Consensus 166 ~l 167 (170)
++
T Consensus 137 ~~ 138 (322)
T 4eo3_A 137 LI 138 (322)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 99
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.90 E-value=6.6e-25 Score=151.64 Aligned_cols=123 Identities=15% Similarity=0.247 Sum_probs=95.5
Q ss_pred ccccCCcccccc-eeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhcc-CCcEEEEeecCCCCCCCC
Q 030881 4 QFIQNPESIFDL-SVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD-QGLEILAFPCNQFGEEEP 81 (170)
Q Consensus 4 ~~~~~g~~~p~f-~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~v~~v~is~d~~~~~~~ 81 (170)
.++..|+++|+| ++.+.+| .+++++++||++||+||++||++|+.++|.|+++++++++ .++.+++|++|.
T Consensus 20 ~~~~vG~~~P~f~~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~------ 92 (165)
T 3s9f_A 20 HMSGVAKHLGEALKLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDE------ 92 (165)
T ss_dssp --CHHHHHHHHTSCEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC------
T ss_pred hhhhhcccCCcceeeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCC------
Confidence 456689999999 9999999 9999999999999999999999999999999999999987 689999999983
Q ss_pred CChHHHHHHHHhhcC-CCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCC-CcEEEEe
Q 030881 82 GSNDQIADFVCTRFK-SEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKN-GQVVDRY 150 (170)
Q Consensus 82 ~~~~~~~~~~~~~~~-~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~-G~i~~~~ 150 (170)
+.++++++++ +++ ..+|+.. +. ....+.. . +++...|++||||++ |+|+++.
T Consensus 93 -~~~~~~~~~~-~~~~~~~~~~~--~~---~~~~l~~-----~-----~~v~~~Pt~~lid~~~G~iv~~~ 146 (165)
T 3s9f_A 93 -EEDDFNAYYA-KMPWLSIPFAN--RN---IVEALTK-----K-----YSVESIPTLIGLNADTGDTVTTR 146 (165)
T ss_dssp -SHHHHHHHHT-TCSSEECCTTC--HH---HHHHHHH-----H-----TTCCSSSEEEEEETTTCCEEESC
T ss_pred -CHHHHHHHHH-hCCCcccccCc--hh---HHHHHHH-----H-----cCCCCCCEEEEEeCCCCEEEecc
Confidence 7788999987 443 2344331 00 0011111 1 234455699999998 9999984
No 100
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.90 E-value=2.4e-24 Score=145.60 Aligned_cols=120 Identities=19% Similarity=0.306 Sum_probs=94.4
Q ss_pred cCCccccc-ceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhcc-CCcEEEEeecCCCCCCCCCCh
Q 030881 7 QNPESIFD-LSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD-QGLEILAFPCNQFGEEEPGSN 84 (170)
Q Consensus 7 ~~g~~~p~-f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~v~~v~is~d~~~~~~~~~~ 84 (170)
..++.+|+ |++.+.+| .+++++++||++||+||++||++|+.++|.|+++++++++ .++.+++|++|. +.
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~-------~~ 74 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDE-------EE 74 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC-------SH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCC-------CH
Confidence 56889999 99999999 9999999999999999999999999999999999999984 579999999973 67
Q ss_pred HHHHHHHHhhcC-CCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEEC-CCCcEEEEe
Q 030881 85 DQIADFVCTRFK-SEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVD-KNGQVVDRY 150 (170)
Q Consensus 85 ~~~~~~~~~~~~-~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid-~~G~i~~~~ 150 (170)
++++++++ +++ .++|+.. .|.. ..+.. . +++...|++++|| ++|+|++++
T Consensus 75 ~~~~~~~~-~~~~~~~~~~~-~d~~----~~~~~-----~-----~~v~~~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 75 DGFAGYFA-KMPWLAVPFAQ-SEAV----QKLSK-----H-----FNVESIPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp HHHHHHHT-TCSSEECCGGG-HHHH----HHHHH-----H-----TTCCSSSEEEEEETTTCCEEESC
T ss_pred HHHHHHHH-HCCceeeccch-hhHH----HHHHH-----H-----hCCCCCCEEEEEECCCCeEEEec
Confidence 88999987 544 3455441 0110 11111 0 2344455999999 999999984
No 101
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.82 E-value=3.2e-25 Score=148.97 Aligned_cols=120 Identities=18% Similarity=0.196 Sum_probs=94.4
Q ss_pred cccccceeeCCCCCeecCCC-CCCc-EEEEEEecCCCCCChhhHHHHHHHHHHhcc--CCcEEEEeecCCCCCCCCCChH
Q 030881 10 ESIFDLSVKDARGHEVDLST-YKGK-VLLIVNVASKCGMTNSNYIELSQLYDKYKD--QGLEILAFPCNQFGEEEPGSND 85 (170)
Q Consensus 10 ~~~p~f~l~~~~g~~~~l~~-~~gk-~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~v~~v~is~d~~~~~~~~~~~ 85 (170)
+.+|+|++.+.+|+.+++++ ++|| ++||+||++||++|+.++|.|+++++++++ .++.+++|++|. +.+
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~-------~~~ 74 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDR-------SED 74 (143)
Confidence 46899999999999999999 9999 999999999999999999999999999953 479999999873 567
Q ss_pred HHHHHHHhhcCCCCCceEEe-ecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeC
Q 030881 86 QIADFVCTRFKSEFPIFEKI-DVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY 151 (170)
Q Consensus 86 ~~~~~~~~~~~~~~p~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~ 151 (170)
.+.+|++ +++.+|+.+... +....... . +++...|++++||++|+|+++..
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~-----------~~v~~~P~~~lid~~G~i~~~~~ 126 (143)
T 2lus_A 75 DMFQYMM-ESHGDWLAIPYRSGPASNVTA---K-----------YGITGIPALVIVKKDGTLISMNG 126 (143)
Confidence 8888887 778887765311 11111111 1 22334459999999999999853
No 102
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.89 E-value=5.1e-24 Score=143.43 Aligned_cols=121 Identities=16% Similarity=0.234 Sum_probs=93.3
Q ss_pred ccCCcccccc-eeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhc-cCCcEEEEeecCCCCCCCCCC
Q 030881 6 IQNPESIFDL-SVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYK-DQGLEILAFPCNQFGEEEPGS 83 (170)
Q Consensus 6 ~~~g~~~p~f-~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~v~~v~is~d~~~~~~~~~ 83 (170)
...|+.+|+| ++.+.+| .+++++++||++||+||++||++|+.+.|.|++++++++ +.++.+++|++|. +
T Consensus 2 ~~~g~~~p~~~~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~-------~ 73 (144)
T 1o73_A 2 SGLAKYLPGATNLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDE-------N 73 (144)
T ss_dssp CGGGGTSCTTCCBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS-------S
T ss_pred cchhhhCccceEeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC-------C
Confidence 4578999997 9999999 999999999999999999999999999999999999998 3579999999973 6
Q ss_pred hHHHHHHHHhhcC-CCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEEC-CCCcEEEEe
Q 030881 84 NDQIADFVCTRFK-SEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVD-KNGQVVDRY 150 (170)
Q Consensus 84 ~~~~~~~~~~~~~-~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid-~~G~i~~~~ 150 (170)
.++++++++ +++ ..+|+.. .+. ...+... +++...|++++|| ++|+|+++.
T Consensus 74 ~~~~~~~~~-~~~~~~~~~~~-~~~----~~~~~~~----------~~v~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 74 ESDFHDYYG-KMPWLALPFDQ-RST----VSELGKT----------FGVESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp HHHHHHHHT-TCSSEECCTTC-HHH----HHHHHHH----------HTCCSSSEEEEEETTTCCEEESC
T ss_pred HHHHHHHHH-hCCceEeeccc-hhH----HHHHHHH----------cCCCCCCEEEEEECCCCeEEecc
Confidence 778888886 443 2344330 010 0111110 1233445999999 899999974
No 103
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.87 E-value=2.2e-22 Score=139.48 Aligned_cols=134 Identities=11% Similarity=0.094 Sum_probs=100.8
Q ss_pred cccCCcccccceeeCCCC----------CeecCCCC-CCcEE-EEEEecCCCCCChh-hHHHHHHHHHHhccCCc-EEEE
Q 030881 5 FIQNPESIFDLSVKDARG----------HEVDLSTY-KGKVL-LIVNVASKCGMTNS-NYIELSQLYDKYKDQGL-EILA 70 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g----------~~~~l~~~-~gk~~-lv~f~~~~C~~C~~-~~~~l~~~~~~~~~~~v-~~v~ 70 (170)
+++.|+++|++++....+ ++++|+++ +||++ |++||++|||+|.. +++.|++.+++|+++|+ ++++
T Consensus 9 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~Vig 88 (176)
T 4f82_A 9 MIQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWC 88 (176)
T ss_dssp CCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 578999999999876533 67899997 99865 55667999999999 99999999999999999 9999
Q ss_pred eecCCCCCCCCCChHHHHHHHHhhcCCC--CCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEE
Q 030881 71 FPCNQFGEEEPGSNDQIADFVCTRFKSE--FPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVD 148 (170)
Q Consensus 71 is~d~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~ 148 (170)
||.| +....++|.+ +.++. ||++ .|.++.... .|+..... ...|.++...+++||| ++|+|++
T Consensus 89 IS~D--------~~~~~~~f~~-~~~l~~~f~lL--sD~~~~va~-ayGv~~~~--~~~G~g~~s~R~tfII-~dG~I~~ 153 (176)
T 4f82_A 89 VSVN--------DAFVMGAWGR-DLHTAGKVRMM--ADGSAAFTH-ALGLTQDL--SARGMGIRSLRYAMVI-DGGVVKT 153 (176)
T ss_dssp EESS--------CHHHHHHHHH-HTTCTTTSEEE--ECTTCHHHH-HHTCEEEC--GGGTCCEEECCEEEEE-ETTEEEE
T ss_pred EeCC--------CHHHHHHHHH-HhCCCCCceEE--EcCchHHHH-HhCCCccc--cccCCCcccccEEEEE-cCCEEEE
Confidence 9987 6888999997 67887 9999 665543322 22221110 0111123234589999 9999999
Q ss_pred EeCCC
Q 030881 149 RYYPT 153 (170)
Q Consensus 149 ~~~~~ 153 (170)
.+.+.
T Consensus 154 ~~~~~ 158 (176)
T 4f82_A 154 LAVEA 158 (176)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 97654
No 104
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.85 E-value=8.3e-21 Score=131.31 Aligned_cols=134 Identities=16% Similarity=0.216 Sum_probs=100.6
Q ss_pred cccCCcccccceeeCCCC-CeecCCC-CCCcEEEEEEe-cCCCCCChhhHHHHHHHHHHhccCCcE-EEEeecCCCCCCC
Q 030881 5 FIQNPESIFDLSVKDARG-HEVDLST-YKGKVLLIVNV-ASKCGMTNSNYIELSQLYDKYKDQGLE-ILAFPCNQFGEEE 80 (170)
Q Consensus 5 ~~~~g~~~p~f~l~~~~g-~~~~l~~-~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~v~-~v~is~d~~~~~~ 80 (170)
.+..|+++|+|+|.+..+ +.++|++ ++||++||+|+ +.|||.|..+++.+++.+++|+++|+. +++||.|
T Consensus 13 ~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D------ 86 (171)
T 2xhf_A 13 PIKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVN------ 86 (171)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESS------
T ss_pred cccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCC------
Confidence 467999999999994332 8999999 49999999998 689999999999999999999999996 9999987
Q ss_pred CCChHHHHHHHHhhcCC--CCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC
Q 030881 81 PGSNDQIADFVCTRFKS--EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT 153 (170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~--~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~ 153 (170)
+....++|.+ +.+. +||++ .|.++.... .|+...... ..|.+......+|||| +|+|++.+...
T Consensus 87 --~~~~~~~w~~-~~~~~~~f~lL--SD~~~~~a~-ayGv~~~~~--~~g~g~~~~R~tfvId-dG~V~~~~v~~ 152 (171)
T 2xhf_A 87 --DPFVMAAWGK-TVDPEHKIRML--ADMHGEFTR-ALGTELDSS--KMLGNNRSRRYAMLID-DNKIRSVSTEP 152 (171)
T ss_dssp --CHHHHHHHHH-HHCTTCCSEEE--ECTTSHHHH-HHTCBCCCH--HHHSSCCBCCEEEEEE-TTEEEEEEETT
T ss_pred --CHHHHHHHHH-hcCCCCCeEEE--EeCCchHHH-HhCCceecc--ccCCCcceEEEEEEEe-CCEEEEEEEeC
Confidence 7889999987 6677 89999 565544332 222211100 0000111122789998 99999997654
No 105
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.84 E-value=3.3e-21 Score=134.74 Aligned_cols=131 Identities=13% Similarity=0.165 Sum_probs=97.7
Q ss_pred cCCcccccceeeC--C---------CC----CeecCCC-CCCcEEEEEEe-cCCCCCCh-hhHHHHHHHHHHh-ccCCcE
Q 030881 7 QNPESIFDLSVKD--A---------RG----HEVDLST-YKGKVLLIVNV-ASKCGMTN-SNYIELSQLYDKY-KDQGLE 67 (170)
Q Consensus 7 ~~g~~~p~f~l~~--~---------~g----~~~~l~~-~~gk~~lv~f~-~~~C~~C~-~~~~~l~~~~~~~-~~~~v~ 67 (170)
..|+++|+|+|.+ . +| +.+++++ ++||++||+|+ +.|||.|. .+++.+++.+++| +++|+.
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~ 81 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD 81 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 5799999999998 4 67 7899999 69999988888 68999999 9999999999999 999995
Q ss_pred -EEEeecCCCCCCCCCChHHHHHHHHhhcCC-CCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCc
Q 030881 68 -ILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQ 145 (170)
Q Consensus 68 -~v~is~d~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~ 145 (170)
+++||.| +....++|.+ ..+. +||++ .|.++.... .|+..... ...|.+......+|||| +|+
T Consensus 82 ~V~gvS~D--------~~~~~~~~~~-~~~~~~f~lL--sD~~~~~a~-~yGv~~~~--~~~G~g~~~~R~tfvId-dG~ 146 (182)
T 1xiy_A 82 DIYCITNN--------DIYVLKSWFK-SMDIKKIKYI--SDGNSSFTD-SMNMLVDK--SNFFMGMRPWRFVAIVE-NNI 146 (182)
T ss_dssp EEEEEESS--------CHHHHHHHHH-HTTCCSSEEE--ECTTSHHHH-HTTCEEEC--GGGTCCEEECCEEEEEE-TTE
T ss_pred EEEEEeCC--------CHHHHHHHHH-HcCCCCceEE--EeCchHHHH-HhCCceec--cccCCCCceEEEEEEEc-CCE
Confidence 9999987 7888899987 6678 69999 565544322 22221110 00111111233789998 999
Q ss_pred EEEEeCC
Q 030881 146 VVDRYYP 152 (170)
Q Consensus 146 i~~~~~~ 152 (170)
|++.+..
T Consensus 147 V~~~~v~ 153 (182)
T 1xiy_A 147 LVKMFQE 153 (182)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9999643
No 106
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.79 E-value=1.2e-18 Score=114.58 Aligned_cols=113 Identities=14% Similarity=0.065 Sum_probs=88.4
Q ss_pred cccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEee--cCCCCCCCCCChHHH
Q 030881 10 ESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFP--CNQFGEEEPGSNDQI 87 (170)
Q Consensus 10 ~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is--~d~~~~~~~~~~~~~ 87 (170)
..+++++..+.+|........+||++||+||++||++|+.+.|.++++.++++ .++.++.|+ .| .-
T Consensus 4 ~~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d-----------~~ 71 (126)
T 2l57_A 4 EGIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEE-----------KN 71 (126)
T ss_dssp CCSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSS-----------HH
T ss_pred cccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCC-----------ch
Confidence 45667777777776665666789999999999999999999999999999997 459999998 43 11
Q ss_pred HHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 88 ADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 88 ~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
.+..+ +++ +...|++++++++|+++.++.|..+.+++.+.|++++
T Consensus 72 ~~~~~-~~~----------------------------------v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 72 IDLAY-KYD----------------------------------ANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp HHHHH-HTT----------------------------------CCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHC
T ss_pred HHHHH-HcC----------------------------------CcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 22222 322 2223399999999999999999889999999999887
Q ss_pred cC
Q 030881 168 GL 169 (170)
Q Consensus 168 ~~ 169 (170)
..
T Consensus 117 ~~ 118 (126)
T 2l57_A 117 VK 118 (126)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 107
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.77 E-value=9.7e-20 Score=121.40 Aligned_cols=117 Identities=12% Similarity=0.093 Sum_probs=87.2
Q ss_pred ccCCcccccce-eeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHH---HHHHHHhccCCcEEEEeecCCCCCCCC
Q 030881 6 IQNPESIFDLS-VKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCNQFGEEEP 81 (170)
Q Consensus 6 ~~~g~~~p~f~-l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~~v~is~d~~~~~~~ 81 (170)
...+..+|+|. +.+.++....+++.+||++||+||++||++|+.+.+.+ .++.+.++ ++.++.|+++.
T Consensus 4 ~~~~~~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~------ 75 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTA------ 75 (134)
T ss_dssp ------CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTT------
T ss_pred ccccccCCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCC------
Confidence 46778899998 66667767778888899999999999999999999999 88998886 49999999862
Q ss_pred CChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEE--EEeCCCCCchHH
Q 030881 82 GSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVV--DRYYPTTSLLSL 159 (170)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~--~~~~~~~~~~~l 159 (170)
..+...+.++ +++ +...|+++++|++|+++ .++.|..+.+++
T Consensus 76 -~~~~~~~l~~-~~~----------------------------------v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l 119 (134)
T 2fwh_A 76 -NDAQDVALLK-HLN----------------------------------VLGLPTILFFDGQGQEHPQARVTGFMDAETF 119 (134)
T ss_dssp -CCHHHHHHHH-HTT----------------------------------CCSSSEEEEECTTSCBCGGGCBCSCCCHHHH
T ss_pred -CcchHHHHHH-HcC----------------------------------CCCCCEEEEECCCCCEeeeeeeeeccCHHHH
Confidence 2233334433 322 22233999999999998 678898899999
Q ss_pred HHHHHHH
Q 030881 160 EHDIKKL 166 (170)
Q Consensus 160 ~~~l~~~ 166 (170)
.+.|+++
T Consensus 120 ~~~l~~~ 126 (134)
T 2fwh_A 120 SAHLRDR 126 (134)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9888765
No 108
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.76 E-value=3.9e-18 Score=114.21 Aligned_cols=105 Identities=19% Similarity=0.171 Sum_probs=84.7
Q ss_pred eeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcC
Q 030881 17 VKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK 96 (170)
Q Consensus 17 l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
+.+.+|...+++.++|+++||+||++||++|+...|.+.++.++++++ +.++.|+++. .. +.++ +++
T Consensus 36 l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~----~~~~-~~~ 102 (141)
T 3hxs_A 36 IADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIYKVNVDK-------EP----ELAR-DFG 102 (141)
T ss_dssp TCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHHH-HTT
T ss_pred hhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEEEEECCC-------CH----HHHH-HcC
Confidence 456678888899899999999999999999999999999999999864 9999998862 21 2222 322
Q ss_pred CCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 97 SEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 97 ~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
|...|++++++++|+++ .+.|..+.+++.+.|+++|++
T Consensus 103 ----------------------------------v~~~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 103 ----------------------------------IQSIPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp ----------------------------------CCSSSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTTC-
T ss_pred ----------------------------------CCCcCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHHcc
Confidence 22234999999999988 677888999999999999875
No 109
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.74 E-value=2.3e-18 Score=117.43 Aligned_cols=124 Identities=12% Similarity=0.043 Sum_probs=84.6
Q ss_pred cCCcccccceeeCCCCCeecCCCCCCcEEEEEEe-cCCCCCChhhHHHH---HHHHHHhccCCcEEEEeecCCCCCCCCC
Q 030881 7 QNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNV-ASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCNQFGEEEPG 82 (170)
Q Consensus 7 ~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l---~~~~~~~~~~~v~~v~is~d~~~~~~~~ 82 (170)
..+...++| +..|..+++++.+||++||+|| ++||++|+.+.|.+ .++.+.+. .++.++.|+.+..
T Consensus 25 ~~~~~~~~~---~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~vd~~~~------ 94 (154)
T 2ju5_A 25 PIAAANLQW---ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVEVDFPQK------ 94 (154)
T ss_dssp SSCCCCCCE---ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEEEECCSS------
T ss_pred hcccCCCCC---CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEEecCccc------
Confidence 344444555 3346667777788999999999 99999999999999 77766553 3499999987631
Q ss_pred ChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCC--CchHHH
Q 030881 83 SNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT--SLLSLE 160 (170)
Q Consensus 83 ~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~--~~~~l~ 160 (170)
. ++.+++. +.. ..+.. . +++...|+++++|++|+++.+. |.. +.+++.
T Consensus 95 -~-----------~~~~~~~---~~~----~~l~~-----~-----~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~ 144 (154)
T 2ju5_A 95 -N-----------HQPEEQR---QKN----QELKA-----Q-----YKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYV 144 (154)
T ss_dssp -C-----------CCCHHHH---HHH----HHHHH-----H-----TTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHH
T ss_pred -c-----------CCChhhH---hhH----HHHHH-----H-----cCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHH
Confidence 1 0111100 000 00000 0 2333445999999999999999 887 788899
Q ss_pred HHHHHHhcCC
Q 030881 161 HDIKKLLGLS 170 (170)
Q Consensus 161 ~~l~~~l~~~ 170 (170)
+.|+++++.+
T Consensus 145 ~~l~~~l~~k 154 (154)
T 2ju5_A 145 SKVKSALKLR 154 (154)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHHhcC
Confidence 9999998753
No 110
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.72 E-value=2.9e-17 Score=108.41 Aligned_cols=108 Identities=18% Similarity=0.188 Sum_probs=79.8
Q ss_pred CCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHH
Q 030881 8 NPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQI 87 (170)
Q Consensus 8 ~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~ 87 (170)
...++|+++ +.++..++....+||++||+||++||++|+.+.|.++++.+++++ ++.++.|+++. . .
T Consensus 20 ~~~~~~~~~--~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~-------~-~-- 86 (128)
T 3ul3_B 20 MFKKVPRLQ--QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDK-------N-E-- 86 (128)
T ss_dssp ------CCC--CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGG-------C-H--
T ss_pred HhccCCccc--cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC-------C-H--
Confidence 445666666 556666777778999999999999999999999999999999975 49999998862 1 1
Q ss_pred HHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHH
Q 030881 88 ADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKK 165 (170)
Q Consensus 88 ~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~ 165 (170)
+.++ +++ +...|+++++ ++|+++.++.|..+.+++.+.|++
T Consensus 87 -~l~~-~~~----------------------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 87 -SLAR-KFS----------------------------------VKSLPTIILL-KNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp -HHHH-HTT----------------------------------CCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHTT
T ss_pred -HHHH-HcC----------------------------------CCCcCEEEEE-ECCEEEEEecCCCCHHHHHHHHHh
Confidence 2222 322 2223388888 799999999998888888887764
No 111
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.68 E-value=1.7e-16 Score=107.18 Aligned_cols=115 Identities=17% Similarity=0.179 Sum_probs=89.1
Q ss_pred cCCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHH
Q 030881 7 QNPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQ 86 (170)
Q Consensus 7 ~~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~ 86 (170)
..+.++++..+.+.++..+......++++||+||++||++|+.+.|.++++.+++.++ +.++.|+.+. ..
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~~-------~~-- 99 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK-VRFVKVNTEA-------EP-- 99 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH--
T ss_pred hcCCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEECcC-------CH--
Confidence 3456677777888877766544467899999999999999999999999999999765 9999998862 22
Q ss_pred HHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHH
Q 030881 87 IADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 166 (170)
Q Consensus 87 ~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~ 166 (170)
+..+ +++ |...|+++++ ++|+++.++.|..+.+++.+.|+++
T Consensus 100 --~l~~-~~~----------------------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 100 --ALST-RFR----------------------------------IRSIPTIMLY-RNGKMIDMLNGAVPKAPFDNWLDEQ 141 (148)
T ss_dssp --HHHH-HTT----------------------------------CCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHH
T ss_pred --HHHH-HCC----------------------------------CCccCEEEEE-ECCeEEEEEeCCCCHHHHHHHHHHH
Confidence 2222 322 2222387777 6999999999999999999999998
Q ss_pred hcC
Q 030881 167 LGL 169 (170)
Q Consensus 167 l~~ 169 (170)
++.
T Consensus 142 l~~ 144 (148)
T 3p2a_A 142 LSR 144 (148)
T ss_dssp HHS
T ss_pred hcc
Confidence 854
No 112
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.64 E-value=4.6e-16 Score=103.08 Aligned_cols=97 Identities=14% Similarity=0.046 Sum_probs=72.2
Q ss_pred CCCcEEEEEEecCCCCCChhhHHHHH--HHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeec
Q 030881 30 YKGKVLLIVNVASKCGMTNSNYIELS--QLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDV 107 (170)
Q Consensus 30 ~~gk~~lv~f~~~~C~~C~~~~~~l~--~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~ 107 (170)
..||++||+||++||++|+.+.|.|. ++.+++++ ++.++.|+++. .+...+..+ ++++.++
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~--------~~~~~~l~~-~~~v~~~------- 89 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN--------FDRNLELSQ-AYGDPIQ------- 89 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT--------TTSSHHHHH-HTTCGGG-------
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc--------ccchHHHHH-HhCCccC-------
Confidence 46999999999999999999999999 99998865 39999998842 011122232 4333110
Q ss_pred CCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCC-------CCCchHHHHHHHHHh
Q 030881 108 NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP-------TTSLLSLEHDIKKLL 167 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~-------~~~~~~l~~~l~~~l 167 (170)
...|+++++|++|+++..+.| ..+.+++.+.|+++.
T Consensus 90 ------------------------~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 90 ------------------------DGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp ------------------------GCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred ------------------------CccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 122399999999999999888 567778888888764
No 113
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.63 E-value=1e-15 Score=99.31 Aligned_cols=88 Identities=19% Similarity=0.248 Sum_probs=69.7
Q ss_pred CCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCC
Q 030881 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (170)
Q Consensus 30 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 109 (170)
.+|+++||+||++||++|+...|.+.++.+++++ +.++.|++|. . . +.++ +++
T Consensus 29 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~-------~-~---~l~~-~~~------------- 81 (116)
T 3qfa_C 29 AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDD-------C-Q---DVAS-ECE------------- 81 (116)
T ss_dssp HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTT-------T-H---HHHH-HTT-------------
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------C-H---HHHH-HcC-------------
Confidence 3789999999999999999999999999999866 9999998862 1 1 2222 322
Q ss_pred CCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+...|+++++ ++|+++..+.|. +.+++.+.|+++|
T Consensus 82 ---------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 82 ---------------------VKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp ---------------------CCSSSEEEEE-SSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred ---------------------CccccEEEEE-eCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 2222387777 899999999998 8889999998875
No 114
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.63 E-value=8.1e-16 Score=98.27 Aligned_cols=88 Identities=20% Similarity=0.213 Sum_probs=65.9
Q ss_pred CCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeec
Q 030881 28 STYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDV 107 (170)
Q Consensus 28 ~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~ 107 (170)
.+..+|++||+|||+||++|+...|.+.++.+.+.+ +.++.|++|. .+ +.++ +++
T Consensus 16 ~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~-------~~----~l~~-~~~----------- 70 (105)
T 3zzx_A 16 NEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDE-------CE----DIAQ-DNQ----------- 70 (105)
T ss_dssp HHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTT-------CH----HHHH-HTT-----------
T ss_pred HhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEeccc-------CH----HHHH-HcC-----------
Confidence 344689999999999999999999999999999864 8899998762 22 2222 322
Q ss_pred CCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHH
Q 030881 108 NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKK 165 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~ 165 (170)
|...||++++ ++|+++.++.|. +++++.+.|++
T Consensus 71 -----------------------V~~~PT~~~~-~~G~~v~~~~G~-~~~~l~~~i~k 103 (105)
T 3zzx_A 71 -----------------------IACMPTFLFM-KNGQKLDSLSGA-NYDKLLELVEK 103 (105)
T ss_dssp -----------------------CCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHH
T ss_pred -----------------------CCeecEEEEE-ECCEEEEEEeCc-CHHHHHHHHHh
Confidence 2222375555 799999999884 77778877765
No 115
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=5.7e-16 Score=102.16 Aligned_cols=101 Identities=13% Similarity=0.166 Sum_probs=74.8
Q ss_pred eecCCCCCCcEEEEEEecCCCCCChhhHHHH---HHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCC
Q 030881 24 EVDLSTYKGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFP 100 (170)
Q Consensus 24 ~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p 100 (170)
.+.+++.+||++||+||++||++|+.+.+.+ ..+.+.+.. ++.++.|+.+. +...+.++ +++
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------~~~~~~~~-~~~---- 83 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEK---------GEGVELRK-KYG---- 83 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSS---------TTHHHHHH-HTT----
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCC---------cchHHHHH-HcC----
Confidence 3455556799999999999999999999998 666665543 48888887651 11122222 322
Q ss_pred ceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 101 IFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 101 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+...|+++++|++|+++.++.|..+.+++.+.|++++..
T Consensus 84 ------------------------------v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 84 ------------------------------VHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp ------------------------------CCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred ------------------------------CCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 222349999999999999999988999999999998864
No 116
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.62 E-value=1.9e-16 Score=109.56 Aligned_cols=118 Identities=9% Similarity=0.085 Sum_probs=69.5
Q ss_pred CCCcEEEEEEecCCCCCChhhHHHH---HHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEee
Q 030881 30 YKGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKID 106 (170)
Q Consensus 30 ~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d 106 (170)
.+||++||+||++||++|+.+.+.+ .++.+.+++ ++.++.|++|. .. ++..............+ ..
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~-------~~-~~~~~~~~~~~~~~~~~--~~ 113 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDN-------KT-PLTEPVKIMENGTERTL--RT 113 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTC-------CC-EEEEEEEEEETTEEEEE--EE
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCc-------cc-ccchhhhhhhcchhhhh--hh
Confidence 4699999999999999999974443 455555543 59999999873 11 00000000000000000 00
Q ss_pred cCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCC-chHHHHHHHHHhc
Q 030881 107 VNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTS-LLSLEHDIKKLLG 168 (170)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~-~~~l~~~l~~~l~ 168 (170)
. ...+....... +++...|+++++|++|+++.++.|..+ .+++.+.|+++++
T Consensus 114 ~-----~~~~~~~~~~~-----~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 114 V-----GDKWSYLQRVK-----FGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp H-----HHHHHHHHHHH-----HSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred h-----hhhhhHHHHHH-----cCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 0 00000000000 233344599999999999999999888 8889999988875
No 117
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.62 E-value=3.7e-15 Score=95.95 Aligned_cols=91 Identities=19% Similarity=0.193 Sum_probs=73.0
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.|+++||+||++||++|....|.++++.+++++ ++.++.|+++. .. +.++ ++
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~-------~~----~l~~-~~--------------- 67 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE-------NQ----ETAG-KY--------------- 67 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT-------CC----SHHH-HT---------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC-------CH----HHHH-Hc---------------
Confidence 789999999999999999999999999999976 49999999863 11 1111 21
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
++...|+++++ ++|+++.++.|..+.+++.+.|++.+..
T Consensus 68 -------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 68 -------------------GVMSIPTLLVL-KDGEVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp -------------------TCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred -------------------CCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 22223388999 8999999999999999999999988753
No 118
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.61 E-value=1e-15 Score=97.53 Aligned_cols=90 Identities=18% Similarity=0.223 Sum_probs=72.1
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
++++++|+||++||++|....|.++++.+++++. +.++.|+.+. .. +.++ +++
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~----~~~~-~~~-------------- 72 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK-AVFGRLNVDE-------NQ----KIAD-KYS-------------- 72 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTT-------CH----HHHH-HTT--------------
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC-ceEEEEcccc-------CH----HHHH-hcC--------------
Confidence 5899999999999999999999999999999764 9999998762 22 2222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|+++..+.|..+.+++.+.|+++++
T Consensus 73 --------------------i~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 109 (109)
T 3tco_A 73 --------------------VLNIPTTLIF-VNGQLVDSLVGAVDEDTLESTVNKYLK 109 (109)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred --------------------cccCCEEEEE-cCCcEEEeeeccCCHHHHHHHHHHHhC
Confidence 2222388888 899999999998899999999998874
No 119
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.61 E-value=3.9e-16 Score=101.84 Aligned_cols=116 Identities=16% Similarity=0.138 Sum_probs=78.1
Q ss_pred ccccCCcccccceeeCCCCCeecCCCC--CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCC
Q 030881 4 QFIQNPESIFDLSVKDARGHEVDLSTY--KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEP 81 (170)
Q Consensus 4 ~~~~~g~~~p~f~l~~~~g~~~~l~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~ 81 (170)
..+..+...+.+.+.+.++-.-.+.+. .++++||+||++||++|+...|.++++.+++++ +.++.|+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~------ 75 (122)
T 2vlu_A 4 SATAAAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE------ 75 (122)
T ss_dssp --------CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT------
T ss_pred cccccCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC------
Confidence 345566666666665544322223332 589999999999999999999999999999875 9999998862
Q ss_pred CChHHHHHHHHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHH
Q 030881 82 GSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEH 161 (170)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~ 161 (170)
.. +.++ +++ +...|+++++ ++|+++.++.|.. .+++.+
T Consensus 76 -~~----~~~~-~~~----------------------------------v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~ 113 (122)
T 2vlu_A 76 -LK----PIAE-QFS----------------------------------VEAMPTFLFM-KEGDVKDRVVGAI-KEELTA 113 (122)
T ss_dssp -CH----HHHH-HTT----------------------------------CCSSSEEEEE-ETTEEEEEEESSC-HHHHHH
T ss_pred -CH----HHHH-HcC----------------------------------CCcccEEEEE-eCCEEEEEEeCcC-HHHHHH
Confidence 11 2222 322 2222375555 8999999998887 888999
Q ss_pred HHHHHhcC
Q 030881 162 DIKKLLGL 169 (170)
Q Consensus 162 ~l~~~l~~ 169 (170)
.|+++++.
T Consensus 114 ~l~~~l~~ 121 (122)
T 2vlu_A 114 KVGLHAAA 121 (122)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhcc
Confidence 99988763
No 120
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.61 E-value=3.5e-15 Score=99.36 Aligned_cols=91 Identities=16% Similarity=0.162 Sum_probs=72.1
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.++++||+||++||++|+...|.+.++.+++++. +.++.|+++. . . +.++ +++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~-~---~l~~-~~~-------------- 89 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIYKVDTEK-------E-Q---ELAG-AFG-------------- 89 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------C-H---HHHH-HTT--------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEEEEeCCC-------C-H---HHHH-HcC--------------
Confidence 4699999999999999999999999999999754 9999998862 1 1 2222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+...|+++++|++|+++ .+.|..+.+++.+.|++++..
T Consensus 90 --------------------v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 90 --------------------IRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp --------------------CCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTS
T ss_pred --------------------CCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 22233999999999998 577888999999999988753
No 121
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.61 E-value=3.3e-16 Score=104.15 Aligned_cols=103 Identities=12% Similarity=0.043 Sum_probs=72.7
Q ss_pred eeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcC
Q 030881 17 VKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK 96 (170)
Q Consensus 17 l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
+.+.++-.-.+++.+||++||+||++||++|+.+.|.++++.+++ ++.++.|+.+. . . +.++ +++
T Consensus 25 l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~-------~-~---~l~~-~~~ 89 (133)
T 3cxg_A 25 LKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDI-------H-P---KLND-QHN 89 (133)
T ss_dssp CCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTT-------C-H---HHHH-HTT
T ss_pred ecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccc-------h-H---HHHH-hcC
Confidence 333343333456667999999999999999999999999988776 48899998752 1 1 1221 222
Q ss_pred CCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEE-CCCCc--EEEEeCCCCCchHHHHHHHHHhcC
Q 030881 97 SEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLV-DKNGQ--VVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 97 ~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~li-d~~G~--i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+...|+++++ +++|+ ++.++.|. +.+++.+.|++++.+
T Consensus 90 ----------------------------------v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 90 ----------------------------------IKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp ----------------------------------CCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSEE
T ss_pred ----------------------------------CCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHHh
Confidence 2223388888 44555 89888887 788899999998753
No 122
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.60 E-value=1.9e-14 Score=94.75 Aligned_cols=91 Identities=13% Similarity=0.081 Sum_probs=71.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.++++||+||++||++|+...|.+.++.+++++. +.++.|+++. . . +.++ +++
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~-------~-~---~l~~-~~~-------------- 86 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNADK-------H-Q---SLGG-QYG-------------- 86 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTT-------C-H---HHHH-HHT--------------
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCC-------C-H---HHHH-HcC--------------
Confidence 4789999999999999999999999999999765 9999998762 1 1 2222 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|++++++++|+++..+.|..+.+++.+.|.+.++
T Consensus 87 --------------------v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 87 --------------------VQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp --------------------CCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred --------------------CCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 22223999999999877888888888899999988774
No 123
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.60 E-value=7.1e-15 Score=93.64 Aligned_cols=90 Identities=20% Similarity=0.201 Sum_probs=71.5
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.+++++|+||++||++|+...|.++++.++++++ +.++.|+++. .. +.++ ++
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~----~~~~-~~--------------- 70 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP----GTAP-KY--------------- 70 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------CT----THHH-HT---------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEEEEECCC-------CH----HHHH-Hc---------------
Confidence 5799999999999999999999999999999764 9999998862 11 1111 21
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
++...|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 71 -------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 71 -------------------GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp -------------------TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred -------------------CCcccCEEEEE-eCCEEEEEEecCCCHHHHHHHHHHhhC
Confidence 22223488888 899999999998899999999998764
No 124
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.60 E-value=3.1e-15 Score=95.92 Aligned_cols=87 Identities=13% Similarity=0.197 Sum_probs=68.1
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
+||++||+||++||++|+...|.++++.+++++ +.++.|+.+. . . +.++ +++
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~-------~-~---~l~~-~~~-------------- 74 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDE-------L-G---DVAQ-KNE-------------- 74 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------C-H---HHHH-HTT--------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCC-------C-H---HHHH-HcC--------------
Confidence 689999999999999999999999999999965 9999998762 1 1 2222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+...|++++++ +|+++.++.|. .++++.+.|++++
T Consensus 75 --------------------v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 75 --------------------VSAMPTLLLFK-NGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp --------------------CCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred --------------------CCccCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 22233888887 89999998887 6788998888764
No 125
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.60 E-value=8.7e-16 Score=97.45 Aligned_cols=90 Identities=17% Similarity=0.181 Sum_probs=71.0
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.|++++|+||++||++|+...|.++++.+++++. +.++.|+++. .. +.++ +++
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------~~----~~~~-~~~-------------- 68 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDE-------NP----ETTS-QFG-------------- 68 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETTT-------CH----HHHH-HTT--------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECcC-------CH----HHHH-HcC--------------
Confidence 5799999999999999999999999999999765 9999998862 21 1221 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|+++..+.|..+.+++.+.|+++++
T Consensus 69 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 105 (105)
T 1nsw_A 69 --------------------IMSIPTLILF-KGGRPVKQLIGYQPKEQLEAQLADVLQ 105 (105)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTTTTTC
T ss_pred --------------------CccccEEEEE-eCCeEEEEEecCCCHHHHHHHHHHHhC
Confidence 2223388888 899999999998888889888887763
No 126
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.59 E-value=9.3e-15 Score=94.00 Aligned_cols=104 Identities=19% Similarity=0.140 Sum_probs=78.0
Q ss_pred eCCCCCeecCC-CCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcC
Q 030881 18 KDARGHEVDLS-TYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK 96 (170)
Q Consensus 18 ~~~~g~~~~l~-~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
.+.++..+... .-.++++||+||++||++|....|.++++.++++++ +.++.|+++. .. +.++ +++
T Consensus 10 ~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------~~----~~~~-~~~ 76 (115)
T 1thx_A 10 ITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDP-------NP----TTVK-KYK 76 (115)
T ss_dssp EECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTT-------CH----HHHH-HTT
T ss_pred EEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCC-------CH----HHHH-HcC
Confidence 34444444322 236899999999999999999999999999999765 9999999862 21 1222 222
Q ss_pred CCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 97 SEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 97 ~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+...|+++++ ++|+++..+.|..+.+++.+.|++++..
T Consensus 77 ----------------------------------v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 77 ----------------------------------VEGVPALRLV-KGEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp ----------------------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred ----------------------------------CCceeEEEEE-cCCEEEEEecCCCCHHHHHHHHHHHhcC
Confidence 2223488888 8999999999988899999999998753
No 127
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.59 E-value=6.9e-15 Score=109.41 Aligned_cols=90 Identities=16% Similarity=0.187 Sum_probs=71.3
Q ss_pred CCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCC
Q 030881 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (170)
Q Consensus 30 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 109 (170)
.+|+++||+||++||++|+...|.+.++.++++++ +.++.|+++. .+ +..+ +++
T Consensus 24 ~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~-------~~----~~~~-~~~------------- 77 (287)
T 3qou_A 24 SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAKLDCDA-------EQ----MIAA-QFG------------- 77 (287)
T ss_dssp TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEEEETTT-------CH----HHHH-TTT-------------
T ss_pred cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEEeCcc-------CH----HHHH-HcC-------------
Confidence 35899999999999999999999999999999864 9999999862 21 2222 322
Q ss_pred CCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
|...||++++ ++|+++.++.|..+.+.+.+.|...+
T Consensus 78 ---------------------v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 78 ---------------------LRAIPTVYLF-QNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp ---------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred ---------------------CCCCCeEEEE-ECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 2223388888 78999999999888888888887765
No 128
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.58 E-value=1.2e-15 Score=103.96 Aligned_cols=91 Identities=18% Similarity=0.118 Sum_probs=72.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.++++||+||++||++|+...|.++++.+++.++ +.++.|+++. .. +... +++
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~~-------~~----~l~~-~~~-------------- 115 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQA-------HP----AVAG-RHR-------------- 115 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTT-------ST----HHHH-HTT--------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCCc-------cH----HHHH-HcC--------------
Confidence 5799999999999999999999999999999765 9999999862 11 1221 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
|...|+++++ ++|+++.++.|..+.+++.+.|++++..
T Consensus 116 --------------------i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 116 --------------------IQGIPAFILF-HKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred --------------------CCcCCEEEEE-eCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 2223387888 7999999999988999999999998864
No 129
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.58 E-value=4.4e-15 Score=99.04 Aligned_cols=105 Identities=13% Similarity=0.149 Sum_probs=76.4
Q ss_pred eeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCC--cEEEEeecCCCCCCCCCChHHHHHHHHhh
Q 030881 17 VKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQG--LEILAFPCNQFGEEEPGSNDQIADFVCTR 94 (170)
Q Consensus 17 l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~--v~~v~is~d~~~~~~~~~~~~~~~~~~~~ 94 (170)
+.++++..+...-..++++||+||++||++|+...|.+.++.+++++.+ +.++.|+++. . .+.++ +
T Consensus 19 v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~~~~-~ 86 (140)
T 2dj1_A 19 VWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS-------A----SMLAS-K 86 (140)
T ss_dssp EEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT-------C----HHHHH-H
T ss_pred CEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc-------c----HHHHH-H
Confidence 3444555443322368999999999999999999999999999998764 8888887652 1 12222 3
Q ss_pred cCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 95 FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 95 ~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
++ |...|+++++ ++|+ +..+.|..+.+++.+.|++++..
T Consensus 87 ~~----------------------------------v~~~Pt~~~~-~~G~-~~~~~g~~~~~~l~~~l~~~~~~ 125 (140)
T 2dj1_A 87 FD----------------------------------VSGYPTIKIL-KKGQ-AVDYDGSRTQEEIVAKVREVSQP 125 (140)
T ss_dssp TT----------------------------------CCSSSEEEEE-ETTE-EEECCSCCCHHHHHHHHHHHHSS
T ss_pred CC----------------------------------CCccCeEEEE-ECCc-EEEcCCCCCHHHHHHHHHHhcCC
Confidence 22 2223388888 7898 66788888999999999998753
No 130
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1.1e-14 Score=93.56 Aligned_cols=90 Identities=7% Similarity=0.073 Sum_probs=66.8
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
+|++++|+||++||++|+...|.+.++.++++..++.++.|+.+. .. +..+ +++
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~~~~-~~~-------------- 73 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE-------NS----EISE-LFE-------------- 73 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT-------CH----HHHH-HTT--------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc-------CH----HHHH-HcC--------------
Confidence 489999999999999999999999999999755569999999862 11 2222 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|+++.++.|. .++++.+.|+++++
T Consensus 74 --------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 74 --------------------ISAVPYFIII-HKGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred --------------------CCcccEEEEE-ECCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 2223387777 799999999886 45568888888764
No 131
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.58 E-value=8.7e-15 Score=93.86 Aligned_cols=92 Identities=20% Similarity=0.241 Sum_probs=69.0
Q ss_pred CCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeec
Q 030881 28 STYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDV 107 (170)
Q Consensus 28 ~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~ 107 (170)
.+.+|++++|+||++||++|+...|.++++.+++++ +.++.|+.+. ... +..+ +++
T Consensus 20 ~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~-------~~~---~~~~-~~~----------- 75 (111)
T 2pu9_C 20 KAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQ-------ENK---TLAK-ELG----------- 75 (111)
T ss_dssp TTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSS-------TTH---HHHH-HHC-----------
T ss_pred HhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCc-------chH---HHHH-HcC-----------
Confidence 344689999999999999999999999999999864 9999998752 111 2221 222
Q ss_pred CCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 108 NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+ ++++++|+++.++.|. ..+++.+.|+++++
T Consensus 76 -----------------------v~~~Pt-~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~ 111 (111)
T 2pu9_C 76 -----------------------IRVVPT-FKILKENSVVGEVTGA-KYDKLLEAIQAARS 111 (111)
T ss_dssp -----------------------CSBSSE-EEEESSSSEEEEEESS-CHHHHHHHHHHHHC
T ss_pred -----------------------CCeeeE-EEEEeCCcEEEEEcCC-CHHHHHHHHHHhhC
Confidence 222237 6777999999998886 47788888888753
No 132
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.58 E-value=6e-15 Score=94.65 Aligned_cols=90 Identities=14% Similarity=0.239 Sum_probs=71.1
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.|++++|+||++||++|+...|.+.++.+++++. +.++.|+.+. .. +.++ +++
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~----~~~~-~~~-------------- 74 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNIDE-------NP----GTAA-KYG-------------- 74 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHHH-HTT--------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcCC-------CH----HHHH-hCC--------------
Confidence 4799999999999999999999999999999764 9999998862 21 1222 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 75 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 75 --------------------VMSIPTLNVY-QGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred --------------------CCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 2222376666 799999999998888999999998875
No 133
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.58 E-value=8e-15 Score=95.38 Aligned_cols=90 Identities=20% Similarity=0.261 Sum_probs=71.4
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.|+++||+||++||++|+...+.++++.+++.+. +.++.|+++. . . +.++ +++
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~-v~~~~vd~d~-------~-~---~l~~-~~~-------------- 82 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK-VVMAKVDIDD-------H-T---DLAI-EYE-------------- 82 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEETTT-------T-H---HHHH-HTT--------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEeCCC-------C-H---HHHH-HcC--------------
Confidence 5799999999999999999999999999998764 9999998862 1 1 2222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|+++..+.|..+.+++.+.|++++.
T Consensus 83 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 83 --------------------VSAVPTVLAM-KNGDVVDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred --------------------CCcccEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHhC
Confidence 2222388888 899999999998889999999988763
No 134
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.58 E-value=1.6e-14 Score=93.91 Aligned_cols=105 Identities=14% Similarity=0.048 Sum_probs=78.9
Q ss_pred eeeCCCCCeecCC-CCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhcc----CCcEEEEeecCCCCCCCCCChHHHHHH
Q 030881 16 SVKDARGHEVDLS-TYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD----QGLEILAFPCNQFGEEEPGSNDQIADF 90 (170)
Q Consensus 16 ~l~~~~g~~~~l~-~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----~~v~~v~is~d~~~~~~~~~~~~~~~~ 90 (170)
.+.++++..+... ..+++++||+||++||++|+...|.++++.+++++ .++.++.|+.+. ..
T Consensus 8 ~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~-------~~------ 74 (121)
T 2djj_A 8 PVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA-------ND------ 74 (121)
T ss_dssp SSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT-------SC------
T ss_pred CeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc-------cc------
Confidence 3456666666544 24789999999999999999999999999999986 258999998752 00
Q ss_pred HHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcE-EEEeCCCCCchHHHHHHHHHhcC
Q 030881 91 VCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQV-VDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 91 ~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i-~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+ .. . . ..+| ++++++++|++ +..+.|..+.+++.+.|++++..
T Consensus 75 -----------~--~~----~--------v--------~~~P---t~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 75 -----------V--PD----E--------I--------QGFP---TIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp -----------C--SS----C--------C--------SSSS---EEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred -----------c--cc----c--------c--------CcCC---eEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 0 00 0 0 2333 99999988885 66788888899999999988753
No 135
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.58 E-value=1.4e-15 Score=103.00 Aligned_cols=90 Identities=14% Similarity=0.066 Sum_probs=69.8
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.++++||+||++||++|+.+.|.+.++.++++++ +.++.|++|. . .+ .++ +++
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~-------~-~~---l~~-~~~-------------- 74 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQ-------T-AV---YTQ-YFD-------------- 74 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTT-------C-CH---HHH-HTT--------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCc-------C-HH---HHH-HcC--------------
Confidence 4899999999999999999999999999999765 9999998862 1 12 222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEE---------EEeCC-CCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVV---------DRYYP-TTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~---------~~~~~-~~~~~~l~~~l~~~l~ 168 (170)
|...|+++ ++++|+++ .++.| ..+.+++.+.|+++++
T Consensus 75 --------------------v~~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~ 121 (149)
T 3gix_A 75 --------------------ISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYR 121 (149)
T ss_dssp --------------------CCSSSEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHH
T ss_pred --------------------CCccCeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHH
Confidence 22223867 77899999 77888 7788889999988764
No 136
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.57 E-value=8.4e-16 Score=106.02 Aligned_cols=47 Identities=15% Similarity=0.098 Sum_probs=41.3
Q ss_pred cCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 26 DLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 26 ~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.+++++|+++||+||++|||+|+.+.|.|++++++++ ++.++.|+.|
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d 94 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKG 94 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHH
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECC
Confidence 4566789999999999999999999999999999875 4899999764
No 137
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.57 E-value=9.7e-15 Score=95.81 Aligned_cols=88 Identities=18% Similarity=0.198 Sum_probs=68.2
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
+|+++||+||++||++|+...|.++++.++++ ++.++.|+.|. . . +.++ +++
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~-------~-~---~l~~-~~~-------------- 88 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDE-------L-K---SVAS-DWA-------------- 88 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT-------S-H---HHHH-HTT--------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECcc-------C-H---HHHH-HcC--------------
Confidence 68999999999999999999999999999986 59999998762 1 1 2222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|+++.++.| .+++++.+.|+++++
T Consensus 89 --------------------v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l~ 124 (124)
T 1xfl_A 89 --------------------IQAMPTFMFL-KEGKILDKVVG-AKKDELQSTIAKHLA 124 (124)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHCC
T ss_pred --------------------CCccCEEEEE-ECCEEEEEEeC-CCHHHHHHHHHHhcC
Confidence 2222376655 89999999888 478889999988764
No 138
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.57 E-value=3.3e-15 Score=98.63 Aligned_cols=90 Identities=20% Similarity=0.176 Sum_probs=71.8
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.++++||+||++||++|+...|.++++.++++++ +.++.|+++. .. +.++ +
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~~~-------~~----~l~~-~---------------- 89 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP----GTAP-K---------------- 89 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEETTT-------CC----TTSG-G----------------
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCC-------CH----HHHH-H----------------
Confidence 5899999999999999999999999999999764 9999998863 11 0110 1
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+++...|+++++ ++|+++..+.|..+.+++.+.|+++++
T Consensus 90 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 90 ------------------YGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp ------------------GTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred ------------------cCCCccCEEEEE-eCCEEEEEEcCCCCHHHHHHHHHHhhC
Confidence 123333498888 899999999998889999999998874
No 139
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.57 E-value=1.9e-14 Score=91.51 Aligned_cols=90 Identities=16% Similarity=0.233 Sum_probs=70.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.|++++|+||++||++|+...|.++++.++++++ +.++.|+.+. .. +.++ +++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~----~~~~-~~~-------------- 70 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNTDE-------SP----NVAS-EYG-------------- 70 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHHH-HHT--------------
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc-eEEEEEECCC-------CH----HHHH-HCC--------------
Confidence 5799999999999999999999999999999764 9999998762 21 1221 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|+++.++.|..+.+++.+.|+++++
T Consensus 71 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 107 (107)
T 1dby_A 71 --------------------IRSIPTIMVF-KGGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp --------------------CCSSCEEEEE-SSSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred --------------------CCcCCEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 1122386666 799999999998888999999998874
No 140
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.57 E-value=4.9e-15 Score=93.40 Aligned_cols=90 Identities=18% Similarity=0.214 Sum_probs=71.8
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
++++++|+||++||++|....+.++++.+++++ +.++.|+.+. .. +..+ +++
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~-------~~----~~~~-~~~-------------- 66 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE-------NP----DIAA-RYG-------------- 66 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------CH----HHHH-HTT--------------
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC-------CH----HHHH-hCC--------------
Confidence 589999999999999999999999999999876 9999998862 11 2222 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+...|+++++ ++|+++..+.|..+.+++.+.|++++.+
T Consensus 67 --------------------v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 104 (104)
T 2e0q_A 67 --------------------VMSLPTVIFF-KDGEPVDEIIGAVPREEIEIRIKNLLGE 104 (104)
T ss_dssp --------------------CCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred --------------------ccccCEEEEE-ECCeEhhhccCCCCHHHHHHHHHHHhcC
Confidence 2222387888 8999999999988889999999998753
No 141
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.56 E-value=8.3e-15 Score=93.15 Aligned_cols=88 Identities=17% Similarity=0.266 Sum_probs=68.0
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.+++++|+||++||++|+...|.++++.+++. ++.++.|++|. .+ +.+. ++
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~-------~~----~l~~-~~--------------- 67 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQD-------MQ----EIAG-RY--------------- 67 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECC-------C---------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCC-------CH----HHHH-hc---------------
Confidence 58999999999999999999999999999984 49999998863 11 1111 11
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
++...|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 68 -------------------~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 68 -------------------AVFTGPTVLLF-YNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp ---------------------CCCCEEEEE-ETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred -------------------CCCCCCEEEEE-eCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 12222388888 59999999999889999999998876
No 142
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.56 E-value=1.9e-14 Score=92.18 Aligned_cols=88 Identities=16% Similarity=0.079 Sum_probs=68.8
Q ss_pred CcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCCC
Q 030881 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEH 111 (170)
Q Consensus 32 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 111 (170)
|+++||+||++||++|+...|.++++.+++++ ++.++.|+.+. . . +.++ +++
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~-~---~~~~-~~~--------------- 75 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA-------V-A---AVAE-AAG--------------- 75 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT-------T-H---HHHH-HHT---------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc-------h-H---HHHH-HcC---------------
Confidence 89999999999999999999999999999975 59999998862 1 1 2221 222
Q ss_pred chhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 112 ASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|+++.++.|. +.+++.+.|+++++
T Consensus 76 -------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 76 -------------------ITAMPTFHVY-KDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp -------------------CCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred -------------------CCcccEEEEE-ECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 1122375555 899999999887 88899999999875
No 143
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.56 E-value=4.9e-15 Score=94.26 Aligned_cols=91 Identities=16% Similarity=0.193 Sum_probs=71.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.+++++|+||++||++|....+.++++.++++++ +.++.|+.+. .. +..+ +++
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~----~~~~-~~~-------------- 69 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK-LLVAKLDVDE-------NP----KTAM-RYR-------------- 69 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTT-------CH----HHHH-HTT--------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc-eEEEEEECCC-------CH----hHHH-hCC--------------
Confidence 5799999999999999999999999999999754 9999999862 21 1222 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+...|+++++ ++|+++..+.|..+.+++.+.|++++..
T Consensus 70 --------------------v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 70 --------------------VMSIPTVILF-KDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred --------------------CCcCCEEEEE-eCCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 2223388888 8999999999988899999999998864
No 144
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.56 E-value=3e-14 Score=94.18 Aligned_cols=111 Identities=19% Similarity=0.123 Sum_probs=77.7
Q ss_pred ccceeeCCCCCeecCCCC-CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccC-CcEEEEeecCCCCCCCCCChHHHHHH
Q 030881 13 FDLSVKDARGHEVDLSTY-KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ-GLEILAFPCNQFGEEEPGSNDQIADF 90 (170)
Q Consensus 13 p~f~l~~~~g~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~v~~v~is~d~~~~~~~~~~~~~~~~ 90 (170)
++-.+.++++..+...-. .++++||+||++||++|+.+.|.+.++.+++++. ++.++.|+.+. .
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~-------~------- 70 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA-------N------- 70 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT-------S-------
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc-------C-------
Confidence 344455666665544433 5899999999999999999999999999999753 48888887642 0
Q ss_pred HHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEE-EeC-CCCCchHHHHHHHHHhc
Q 030881 91 VCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVD-RYY-PTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 91 ~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~-~~~-~~~~~~~l~~~l~~~l~ 168 (170)
+.+ .. . ++|...|++++++++|++.. .+. |..+.+++.+.|++++.
T Consensus 71 ---------~~~---------~~---~-----------~~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 71 ---------DIT---------ND---Q-----------YKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHAT 118 (133)
T ss_dssp ---------CCC---------CS---S-----------CCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSS
T ss_pred ---------HHH---------Hh---h-----------cCCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcc
Confidence 000 00 0 23334459999988776543 345 55788899999998875
Q ss_pred C
Q 030881 169 L 169 (170)
Q Consensus 169 ~ 169 (170)
.
T Consensus 119 ~ 119 (133)
T 2dj3_A 119 K 119 (133)
T ss_dssp S
T ss_pred c
Confidence 3
No 145
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=1.3e-14 Score=95.21 Aligned_cols=89 Identities=17% Similarity=0.134 Sum_probs=68.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
+++ +||+||++||++|+...|.+.++.+++++.++.++.|+++. .. +.++ +++
T Consensus 22 ~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~-------~~----~~~~-~~~-------------- 74 (126)
T 1x5e_A 22 EGD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE-------QP----GLSG-RFI-------------- 74 (126)
T ss_dssp SSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT-------CH----HHHH-HTT--------------
T ss_pred CCC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC-------CH----HHHH-HcC--------------
Confidence 444 99999999999999999999999999987679999998862 21 1222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|++ .++.|..+.+++.+.|++++.
T Consensus 75 --------------------v~~~Pt~~~~-~~G~~-~~~~G~~~~~~l~~~l~~~~~ 110 (126)
T 1x5e_A 75 --------------------INALPTIYHC-KDGEF-RRYQGPRTKKDFINFISDKEW 110 (126)
T ss_dssp --------------------CCSSSEEEEE-ETTEE-EECCSCCCHHHHHHHHHTCGG
T ss_pred --------------------CcccCEEEEE-eCCeE-EEeecCCCHHHHHHHHHHHhh
Confidence 2222388888 88995 678888888899999988764
No 146
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.56 E-value=6e-15 Score=98.75 Aligned_cols=90 Identities=9% Similarity=0.034 Sum_probs=71.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.++++||+||++||++|+...|.+.++.++++++ +.++.|+++. . . +.++ +++
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~-~---~l~~-~~~-------------- 75 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS-AVFGRINIAT-------N-P---WTAE-KYG-------------- 75 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETTT-------C-H---HHHH-HHT--------------
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECCc-------C-H---hHHH-HCC--------------
Confidence 4899999999999999999999999999999875 9999998862 2 2 2222 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
|...|+++++ ++|+++..+.|..+.+++.+.|+++++
T Consensus 76 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 76 --------------------VQGTPTFKFF-CHGRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp --------------------CCEESEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred --------------------CCcCCEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 2222376776 799999999998899999999998874
No 147
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.56 E-value=2.4e-15 Score=107.31 Aligned_cols=107 Identities=13% Similarity=0.118 Sum_probs=80.0
Q ss_pred ceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhh
Q 030881 15 LSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTR 94 (170)
Q Consensus 15 f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~ 94 (170)
..+.+.++..+.....+|+++||+||++||++|+...|.+.++.+++++. +.++.|+++. .. +.+. +
T Consensus 97 ~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~~~-------~~----~l~~-~ 163 (210)
T 3apq_A 97 PEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIGAVNCGD-------DR----MLCR-M 163 (210)
T ss_dssp TTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTT-------CH----HHHH-H
T ss_pred CceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc-eEEEEEECCc-------cH----HHHH-H
Confidence 33444444444333357899999999999999999999999999999764 9999998862 21 2222 3
Q ss_pred cCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 95 FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 95 ~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
++ |...|+++++ ++|+++..+.|..+.+++.+.|++++..
T Consensus 164 ~~----------------------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 203 (210)
T 3apq_A 164 KG----------------------------------VNSYPSLFIF-RSGMAAVKYNGDRSKESLVAFAMQHVRS 203 (210)
T ss_dssp TT----------------------------------CCSSSEEEEE-CTTSCCEECCSCCCHHHHHHHHHHHHHC
T ss_pred cC----------------------------------CCcCCeEEEE-ECCCceeEecCCCCHHHHHHHHHHhCcc
Confidence 22 2223388888 8999999999988999999999988753
No 148
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.56 E-value=7.3e-15 Score=97.96 Aligned_cols=89 Identities=24% Similarity=0.363 Sum_probs=69.9
Q ss_pred CCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCC
Q 030881 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (170)
Q Consensus 30 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 109 (170)
.+|+++||+||++||++|+.+.|.++++.++++ ++.++.|++|. . .+..+ +++
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~-------~----~~~~~-~~~------------- 96 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDE-------L----SDFSA-SWE------------- 96 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------S----HHHHH-HTT-------------
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcc-------c----HHHHH-HcC-------------
Confidence 458999999999999999999999999999984 59999998862 1 12222 322
Q ss_pred CCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|+++.++.|. +.+++.+.|+++++
T Consensus 97 ---------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 97 ---------------------IKATPTFFFL-RDGQQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp ---------------------CCEESEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred ---------------------CCcccEEEEE-cCCeEEEEEeCC-CHHHHHHHHHHHhc
Confidence 2223387777 899999999887 78889999988875
No 149
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.56 E-value=1.2e-14 Score=91.90 Aligned_cols=102 Identities=14% Similarity=0.186 Sum_probs=74.5
Q ss_pred eCCCCCeecCCC-CCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcC
Q 030881 18 KDARGHEVDLST-YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK 96 (170)
Q Consensus 18 ~~~~g~~~~l~~-~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
.+.++..+...- -.+++++|+||++||++|+...+.++++.++++++ +.++.|+.+. .. +.++ +++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~----~~~~-~~~ 69 (105)
T 1fb6_A 3 QDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVYKLNTDE-------AP----GIAT-QYN 69 (105)
T ss_dssp EECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHHH-HTT
T ss_pred eechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-eEEEEEcCcc-------hH----HHHH-hCC
Confidence 344554443322 25799999999999999999999999999999764 9999998762 21 2222 322
Q ss_pred CCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 97 SEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 97 ~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+...|+++++ ++|+++..+.|..+.+++.+.|+++|
T Consensus 70 ----------------------------------v~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 70 ----------------------------------IRSIPTVLFF-KNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp ----------------------------------CCSSSEEEEE-ETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred ----------------------------------CCcccEEEEE-eCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 2222376665 79999999999888889999998875
No 150
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.55 E-value=1.2e-14 Score=92.14 Aligned_cols=89 Identities=19% Similarity=0.245 Sum_probs=70.9
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
++++++|+||++||++|+...|.++++.++++++ +.++.|+.+. .. + .++ +++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~-~---~~~-~~~-------------- 70 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDE-------NP-S---TAA-KYE-------------- 70 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH-H---HHH-HTT--------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCc-------CH-H---HHH-hCC--------------
Confidence 7899999999999999999999999999999866 9999998862 22 1 221 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+...|++++++ +|+++..+.|..+.+++.+.|+++|
T Consensus 71 --------------------v~~~Pt~~~~~-~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 71 --------------------VMSIPTLIVFK-DGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp --------------------CCSBSEEEEEE-TTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred --------------------CcccCEEEEEe-CCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 22223877884 9999999999888899999988764
No 151
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.55 E-value=1.6e-14 Score=91.49 Aligned_cols=89 Identities=19% Similarity=0.232 Sum_probs=69.9
Q ss_pred CCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecC
Q 030881 29 TYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (170)
Q Consensus 29 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 108 (170)
+.++++++|+||++||++|+...|.+.++.+++++ +.++.|+.+. .. +..+ +++
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~-------~~----~~~~-~~~------------ 70 (105)
T 3m9j_A 17 AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDD-------CQ----DVAS-ESE------------ 70 (105)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTT-------CH----HHHH-HTT------------
T ss_pred hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhh-------hH----HHHH-HcC------------
Confidence 34689999999999999999999999999999865 9999998762 21 2222 222
Q ss_pred CCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+...|+++++ ++|+++.++.|. +.+++.+.|+++|
T Consensus 71 ----------------------v~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 71 ----------------------VKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp ----------------------CCBSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred ----------------------CCcCcEEEEE-ECCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 2223388888 789999999888 8888999998875
No 152
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.55 E-value=1.8e-14 Score=92.10 Aligned_cols=90 Identities=16% Similarity=0.217 Sum_probs=71.8
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.+++++|+||++||++|+...|.+.++.++++++ +.++.|+++. .+ +.++ +++
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~-------~~----~l~~-~~~-------------- 73 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES-FGFYYVDVEE-------EK----TLFQ-RFS-------------- 73 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTT-------CH----HHHH-HTT--------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc-eEEEEEECCc-------Ch----hHHH-hcC--------------
Confidence 5799999999999999999999999999999764 9999998862 21 2222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|+++.++.|..+.+++.+.|++++.
T Consensus 74 --------------------v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 74 --------------------LKGVPQILYF-KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp --------------------CCSSCEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred --------------------CCcCCEEEEE-ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 2223387888 789999999998899999999998874
No 153
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.54 E-value=4.2e-14 Score=89.71 Aligned_cols=89 Identities=12% Similarity=0.166 Sum_probs=70.4
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.++++||+||++||++|+...+.++++.+++++ ++.++.|+++. .. +.++ +++
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------~~----~~~~-~~~-------------- 71 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD-------NP----ETPN-AYQ-------------- 71 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT-------CC----HHHH-HTT--------------
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC-------CH----HHHH-hcC--------------
Confidence 579999999999999999999999999999975 49999998862 11 1221 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+...|+++++ ++|+++..+.|..+.+++.+.|++++
T Consensus 72 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 72 --------------------VRSIPTLMLV-RDGKVIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHTC
T ss_pred --------------------CCccCEEEEE-eCCEEEEEecCCCCHHHHHHHHHhcC
Confidence 2223388888 89999999999888888999888753
No 154
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.31 E-value=4.4e-16 Score=102.76 Aligned_cols=103 Identities=7% Similarity=0.120 Sum_probs=76.3
Q ss_pred CCeecCCCCCCcEEEEEEecCCCCCChhhHHHH---HHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCC
Q 030881 22 GHEVDLSTYKGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSE 98 (170)
Q Consensus 22 g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~ 98 (170)
...+.+...+||++||+||++||++|+...|.+ .++.+.+++ ++.++.|+++. ++..+.++ +
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------~~~~~~~~-~---- 73 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDT---------PEGQELAR-R---- 73 (130)
Confidence 566777778899999999999999999999999 888887765 38888887641 11111111 1
Q ss_pred CCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECC-CCcE--EEEeCCCCCchHHHHHHHHHhcC
Q 030881 99 FPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDK-NGQV--VDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 99 ~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~-~G~i--~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+++...|+++++|+ +|++ +.++.|..+.+++.+.|++++.+
T Consensus 74 ------------------------------~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 74 ------------------------------YRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 11222349999996 5999 88888888888999999888753
No 155
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.54 E-value=8.1e-17 Score=110.86 Aligned_cols=102 Identities=12% Similarity=0.115 Sum_probs=71.0
Q ss_pred CeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCce
Q 030881 23 HEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIF 102 (170)
Q Consensus 23 ~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 102 (170)
..+.....+||++||+||++||++|+.+.|.|+++.+.+.. ++.|+.|+++. ..+.+ . ..++.
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~-------~~~~~---~-~~~~~----- 99 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLED-------EEEPK---D-EDFSP----- 99 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEG-------GGSCS---C-GGGCT-----
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecC-------CchHH---H-HHhcc-----
Confidence 34555556899999999999999999999999997665543 37778887752 11100 0 01110
Q ss_pred EEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC----------CCchHHHHHHHHHhc
Q 030881 103 EKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT----------TSLLSLEHDIKKLLG 168 (170)
Q Consensus 103 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~----------~~~~~l~~~l~~~l~ 168 (170)
.+...|+++++|++|+++.++.|. .+.+++.+.|+++++
T Consensus 100 ---------------------------~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 100 ---------------------------DGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp ---------------------------TCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred ---------------------------cCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 011123999999999999887774 677788888888764
No 156
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.53 E-value=2.4e-14 Score=93.37 Aligned_cols=90 Identities=17% Similarity=0.137 Sum_probs=70.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
+++++||+||++||++|....+.++++.++++++++.++.|+.+. .. +.++ +++
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~-------~~----~~~~-~~~-------------- 85 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE-------QS----QIAQ-EVG-------------- 85 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT-------CH----HHHH-HHT--------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC-------CH----HHHH-HcC--------------
Confidence 689999999999999999999999999999987779999999862 21 1221 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|+++.++.|. +.+++.+.|+++++
T Consensus 86 --------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 121 (121)
T 2j23_A 86 --------------------IRAMPTFVFF-KNGQKIDTVVGA-DPSKLQAAITQHSA 121 (121)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHTC
T ss_pred --------------------CCcccEEEEE-ECCeEEeeEcCC-CHHHHHHHHHHhhC
Confidence 1122386776 699999998887 88899999998864
No 157
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.53 E-value=2.9e-14 Score=96.77 Aligned_cols=89 Identities=10% Similarity=0.094 Sum_probs=69.8
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
+|+++||+||++||++|+...|.+.++.++++ ++.++.|+++. .. +.++ +++
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~-------~~----~l~~-~~~-------------- 82 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEG-------VP----EVSE-KYE-------------- 82 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHHH-HTT--------------
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCC-------CH----HHHH-HcC--------------
Confidence 48999999999999999999999999999984 59999998862 11 2222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+...|++++++ +|+++.++.|. .++++.+.|++++..
T Consensus 83 --------------------v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 83 --------------------ISSVPTFLFFK-NSQKIDRLDGA-HAPELTKKVQRHASS 119 (153)
T ss_dssp --------------------CCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHSCT
T ss_pred --------------------CCCCCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 22233989998 99999988884 677899999988753
No 158
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=3.4e-14 Score=93.76 Aligned_cols=91 Identities=14% Similarity=0.131 Sum_probs=70.7
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhcc---CCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeec
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD---QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDV 107 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~ 107 (170)
.++++||+||++||++|+...|.+.++.+++++ .++.++.|+.+. . . +.++ +++
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~-~---~l~~-~~~----------- 80 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV-------N-Q---VLAS-RYG----------- 80 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT-------C-C---HHHH-HHT-----------
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC-------C-H---HHHH-hCC-----------
Confidence 579999999999999999999999999999972 349999998762 1 1 1221 211
Q ss_pred CCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 108 NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++++ |+++..+.|..+.+++.+.|++++.
T Consensus 81 -----------------------v~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 81 -----------------------IRGFPTIKIFQK-GESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp -----------------------CCSSSEEEEEET-TEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred -----------------------CCeeCeEEEEeC-CCceEEecCCCCHHHHHHHHHHHhh
Confidence 222238899987 8888899998899999999988874
No 159
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.53 E-value=2.3e-14 Score=93.61 Aligned_cols=90 Identities=19% Similarity=0.219 Sum_probs=67.6
Q ss_pred CCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCC
Q 030881 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (170)
Q Consensus 30 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 109 (170)
.+|++++|+||++||++|+...|.++++.++++ ++.++.|+.+. ... +..+ +++
T Consensus 35 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~-------~~~---~~~~-~~~------------- 88 (124)
T 1faa_A 35 AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ-------ENK---TLAK-ELG------------- 88 (124)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS-------TTH---HHHH-HHC-------------
T ss_pred cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc-------chH---HHHH-HcC-------------
Confidence 468999999999999999999999999999986 49999998752 111 1221 222
Q ss_pred CCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+ +++.++|+++.++.|.. .+++.+.|+++++
T Consensus 89 ---------------------v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~~ 124 (124)
T 1faa_A 89 ---------------------IRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAARS 124 (124)
T ss_dssp ---------------------CSSSSE-EEEEETTEEEEEEESSC-HHHHHHHHHHHTC
T ss_pred ---------------------CCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHhhC
Confidence 222237 56668999999988865 7888888887753
No 160
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.53 E-value=2.8e-14 Score=93.78 Aligned_cols=89 Identities=7% Similarity=0.148 Sum_probs=69.1
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
+++++||+||++||++|....|.+.++.++++ ++.++.|+++. . . +.++ +++
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~-------~-~---~l~~-~~~-------------- 87 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADN-------N-S---EIVS-KCR-------------- 87 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTT-------C-H---HHHH-HTT--------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC-------C-H---HHHH-HcC--------------
Confidence 68999999999999999999999999999984 49999999862 1 1 1222 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+...|+++++ ++|+++..+.| .+++++.+.|+++++.
T Consensus 88 --------------------v~~~Pt~~i~-~~G~~~~~~~G-~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 88 --------------------VLQLPTFIIA-RSGKMLGHVIG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred --------------------CCcccEEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHhcC
Confidence 2223385555 89999999888 6788899999988753
No 161
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.53 E-value=3.6e-14 Score=91.03 Aligned_cols=89 Identities=7% Similarity=0.053 Sum_probs=68.5
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.++++||+||++||++|....|.+.++.+++. ++.++.|+.+. . .+.++ +++
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~-------~----~~l~~-~~~-------------- 69 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEA-------R----PELMK-ELG-------------- 69 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGG-------C----HHHHH-HTT--------------
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcC-------C----HHHHH-HcC--------------
Confidence 57899999999999999999999999998875 48999998752 1 11221 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|+++.++.|..+++++.+.|+....
T Consensus 70 --------------------v~~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 70 --------------------FERVPTLVFI-RDGKVAKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp --------------------CCSSCEEEEE-ESSSEEEEEESCCCHHHHHHHHHTC--
T ss_pred --------------------CcccCEEEEE-ECCEEEEEEcCCCCHHHHHHHHHHHhh
Confidence 2223388888 899999999998899999998887654
No 162
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.52 E-value=7e-14 Score=93.34 Aligned_cols=104 Identities=14% Similarity=0.164 Sum_probs=70.8
Q ss_pred eCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCC
Q 030881 18 KDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS 97 (170)
Q Consensus 18 ~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~ 97 (170)
.+.++..+...-..++.+||+||++||++|....+.++++.+++++. +.++.|+.+. .. +... +++
T Consensus 36 ~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~~----~l~~-~~~- 101 (140)
T 1v98_A 36 VEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGR-LKVVKVNVDE-------HP----GLAA-RYG- 101 (140)
T ss_dssp -------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------CH----HHHH-HTT-
T ss_pred ccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCC-------CH----HHHH-HCC-
Confidence 34444444333223333999999999999999999999999999764 9999998862 11 2222 322
Q ss_pred CCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 98 EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 98 ~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+...|+++++ ++|+++..+.|..+.+++.+.|++++++
T Consensus 102 ---------------------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 102 ---------------------------------VRSVPTLVLF-RRGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp ---------------------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred ---------------------------------CCccCEEEEE-eCCcEEEEEeCCCCHHHHHHHHHHHHcc
Confidence 2222387777 7999999999988889999999999865
No 163
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.52 E-value=3.1e-14 Score=92.16 Aligned_cols=90 Identities=21% Similarity=0.291 Sum_probs=67.6
Q ss_pred CCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEee
Q 030881 27 LSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKID 106 (170)
Q Consensus 27 l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d 106 (170)
+.+.+|++++|+||++||++|+...|.++++.+++ ++.++.|+.+. . . +.++ +++
T Consensus 28 l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~-------~-~---~~~~-~~~---------- 82 (117)
T 2xc2_A 28 LEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDK-------L-E---ETAR-KYN---------- 82 (117)
T ss_dssp HHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTT-------S-H---HHHH-HTT----------
T ss_pred HHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCc-------c-H---HHHH-HcC----------
Confidence 33347899999999999999999999999999887 59999998762 1 1 2222 322
Q ss_pred cCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 107 VNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+...|+++++ ++|+++.++.| .+++++.+.|+++|
T Consensus 83 ------------------------v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 83 ------------------------ISAMPTFIAI-KNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp ------------------------CCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred ------------------------CCccceEEEE-eCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 2222375555 79999999888 57788888888764
No 164
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.51 E-value=5.6e-14 Score=89.44 Aligned_cols=87 Identities=18% Similarity=0.214 Sum_probs=66.0
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
++++++|+||++||++|+...|.++++.++++ ++.++.|+.+. . . +..+ +++
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~-------~-~---~~~~-~~~-------------- 71 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQ-------C-Q---GTAA-TNN-------------- 71 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------S-H---HHHH-HTT--------------
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECcc-------C-H---HHHH-hcC--------------
Confidence 58999999999999999999999999999984 49999998862 2 1 2222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+...|+++++ ++|+++.++.|. ..+++.+.|++++
T Consensus 72 --------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 106 (107)
T 1gh2_A 72 --------------------ISATPTFQFF-RNKVRIDQYQGA-DAVGLEEKIKQHL 106 (107)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHH
T ss_pred --------------------CCcccEEEEE-ECCeEEEEEeCC-CHHHHHHHHHHhc
Confidence 2222387777 789999998884 4556888888765
No 165
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.51 E-value=5.2e-14 Score=90.43 Aligned_cols=88 Identities=15% Similarity=0.144 Sum_probs=67.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
+|+++||+||++||++|....+.+.++.++++ ++.++.|+++. . . +.++ +++
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~-------~-~---~~~~-~~~-------------- 76 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDE-------V-S---EVTE-KEN-------------- 76 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------T-H---HHHH-HTT--------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCC-------C-H---HHHH-HcC--------------
Confidence 68999999999999999999999999999986 49999998862 1 1 2222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+...|+++++ ++|+++..+.|. +.+++.+.|+++++
T Consensus 77 --------------------v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 112 (112)
T 1syr_A 77 --------------------ITSMPTFKVY-KNGSSVDTLLGA-NDSALKQLIEKYAA 112 (112)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHTTC-
T ss_pred --------------------CCcccEEEEE-ECCcEEEEEeCC-CHHHHHHHHHHhhC
Confidence 2222375555 699999999887 88889999988763
No 166
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.51 E-value=4.5e-14 Score=91.25 Aligned_cols=85 Identities=22% Similarity=0.287 Sum_probs=64.5
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
+|+++||+||++||++|+...|.++++.+++++ +.++.|+++. .. +.++ +++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~-------~~----~l~~-~~~-------------- 80 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDE-------SP----DIAK-ECE-------------- 80 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTT-------CH----HHHH-HTT--------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------CH----HHHH-HCC--------------
Confidence 589999999999999999999999999999865 9999998862 21 2222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHH
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKK 165 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~ 165 (170)
+...|+++++ ++|+++.++.|.. .+++.+.|++
T Consensus 81 --------------------v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 81 --------------------VTAMPTFVLG-KDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp --------------------CCSBSEEEEE-ETTEEEEEEESSC-HHHHHHHHHT
T ss_pred --------------------CCcccEEEEE-eCCeEEEEEeCCC-HHHHHHHHHh
Confidence 2222376655 8999999988876 7777777764
No 167
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.51 E-value=7.9e-14 Score=88.30 Aligned_cols=89 Identities=21% Similarity=0.313 Sum_probs=67.3
Q ss_pred CCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCC
Q 030881 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (170)
Q Consensus 30 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 109 (170)
.++++++|+||++||++|....+.++++.+++++ ++.++.|+.+. .. +.++ +++
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~-------~~----~~~~-~~~------------- 71 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDE-------CE----DIAM-EYN------------- 71 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT-------CH----HHHH-HTT-------------
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccc-------hH----HHHH-HcC-------------
Confidence 4689999999999999999999999999999863 49999998762 11 2222 222
Q ss_pred CCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+...|+++++ ++|+++..+.| .+++++.+.|+++|
T Consensus 72 ---------------------v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 72 ---------------------ISSMPTFVFL-KNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp ---------------------CCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred ---------------------CCcccEEEEE-cCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 2222375555 78999999888 67888888888764
No 168
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.51 E-value=9.7e-15 Score=98.57 Aligned_cols=90 Identities=9% Similarity=0.005 Sum_probs=66.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.++++||.|||+||++|+...|.|.++.+++.++ +.|+.|++|.. + ++.. ++
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVDe~-------~----e~a~-~y--------------- 91 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDITEV-------P----DFNT-MY--------------- 91 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTC-------C----TTTT-TT---------------
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECCCC-------H----HHHH-Hc---------------
Confidence 4689999999999999999999999999999755 89999998731 1 1111 22
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEE--E-------EeCCCCC-chHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVV--D-------RYYPTTS-LLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~--~-------~~~~~~~-~~~l~~~l~~~l~ 168 (170)
+|...||++++ ++|+.+ . +..|..+ .+++.+.|+++++
T Consensus 92 -------------------~V~siPT~~fF-k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 92 -------------------ELYDPVSVMFF-YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp -------------------TCCSSEEEEEE-ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred -------------------CCCCCCEEEEE-ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHH
Confidence 22223376555 577777 4 6777666 7889999888775
No 169
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.51 E-value=6.4e-14 Score=90.49 Aligned_cols=89 Identities=20% Similarity=0.271 Sum_probs=68.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.|+++||+||++||++|+...+.++++.++++ ++.++.|+.+. . .+.++ +++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~----~~~~~-~~~-------------- 78 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDE-------L----KDVAE-AYN-------------- 78 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------S----HHHHH-HTT--------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEccc-------C----HHHHH-HcC--------------
Confidence 48999999999999999999999999999986 59999998762 1 12222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+...|+++++ ++|+++..+.| .+.+++.+.|+++++.
T Consensus 79 --------------------v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 79 --------------------VEAMPTFLFI-KDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp --------------------CCSBSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred --------------------CCcCcEEEEE-eCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 2222376666 79999999888 5788899999998864
No 170
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.51 E-value=5.1e-14 Score=88.88 Aligned_cols=89 Identities=17% Similarity=0.278 Sum_probs=67.7
Q ss_pred CCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecC
Q 030881 29 TYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (170)
Q Consensus 29 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 108 (170)
+..|++++|+||++||++|....+.++++.++++ ++.++.|+.+. .. +.++ +++
T Consensus 16 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~----~~~~-~~~------------ 69 (104)
T 2vim_A 16 ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQ-------NE----EAAA-KYS------------ 69 (104)
T ss_dssp TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------CH----HHHH-HTT------------
T ss_pred hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccC-------CH----HHHH-HcC------------
Confidence 3468999999999999999999999999999986 59999998862 11 2222 222
Q ss_pred CCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+...|+++++ ++|+++.++.| .+.+++.+.|++++
T Consensus 70 ----------------------v~~~Pt~~~~-~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 70 ----------------------VTAMPTFVFI-KDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp ----------------------CCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred ----------------------CccccEEEEE-eCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 2222386666 58999999888 57888998888764
No 171
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.50 E-value=1.4e-13 Score=88.19 Aligned_cols=89 Identities=15% Similarity=0.179 Sum_probs=68.7
Q ss_pred CCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCC
Q 030881 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (170)
Q Consensus 30 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 109 (170)
..|+++||+||++||++|....+.++++.++++ ++.++.|+.+. .. ++ .+ ++++
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------~~-~~---~~-~~~v------------ 77 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDE-------LK-AV---AE-EWNV------------ 77 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT-------CH-HH---HH-HHHC------------
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccc-------cH-HH---HH-hCCC------------
Confidence 358999999999999999999999999999986 59999998862 22 21 21 2111
Q ss_pred CCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
..+ |+++++ ++|+++.++.| .+++++.+.|+++++
T Consensus 78 -------------------~~~---Pt~~~~-~~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 78 -------------------EAM---PTFIFL-KDGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp -------------------SST---TEEEEE-ETTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred -------------------Ccc---cEEEEE-eCCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 122 376776 79999999888 578899999998875
No 172
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.50 E-value=2.7e-14 Score=94.96 Aligned_cols=94 Identities=12% Similarity=0.172 Sum_probs=68.3
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChH---HHHHHHHhhcCCCCCceEEeec
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSND---QIADFVCTRFKSEFPIFEKIDV 107 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~d~ 107 (170)
++ ++||+||++||++|+.+.|.++++.++++ +.++.|+++.. .... +..+.++ +
T Consensus 31 ~~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~-----~~~~~~d~~~~l~~-~------------- 87 (135)
T 3emx_A 31 QG-DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSL-----IGERELSAARLEMN-K------------- 87 (135)
T ss_dssp TS-SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTT-----CCHHHHHHHHHHHH-H-------------
T ss_pred CC-cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCc-----hhhhhhhhhHHHHH-H-------------
Confidence 44 99999999999999999999999999885 88999988531 1111 1111111 1
Q ss_pred CCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 108 NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+++...|++++++ +|+++.++.|..+.+.+.+.++++++.
T Consensus 88 ---------------------~~v~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 88 ---------------------AGVEGTPTLVFYK-EGRIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp ---------------------HTCCSSSEEEEEE-TTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred ---------------------cCCceeCeEEEEc-CCEEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 1233334766666 999999999999998899999988764
No 173
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.3e-14 Score=95.44 Aligned_cols=90 Identities=16% Similarity=0.010 Sum_probs=64.9
Q ss_pred CCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCC
Q 030881 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (170)
Q Consensus 30 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 109 (170)
.+++++||+||++||++|+.+.|.++++.+++++.++.++.|+++. .. +.++ ++++..+
T Consensus 24 ~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~-------~~----~~~~-~~~v~~~--------- 82 (137)
T 2dj0_A 24 DKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR-------YT----DVST-RYKVSTS--------- 82 (137)
T ss_dssp STTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT-------CH----HHHH-HTTCCCC---------
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc-------CH----HHHH-HccCccc---------
Confidence 3567999999999999999999999999999987679999998762 22 2332 4444311
Q ss_pred CCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHH
Q 030881 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLE 160 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~ 160 (170)
..+...|+++++ ++|+++.++.|..+.+++.
T Consensus 83 -------------------~~~~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~ 113 (137)
T 2dj0_A 83 -------------------PLTKQLPTLILF-QGGKEAMRRPQIDKKGRAV 113 (137)
T ss_dssp -------------------SSSSCSSEEEEE-SSSSEEEEESCBCSSSCBC
T ss_pred -------------------CCcCCCCEEEEE-ECCEEEEEecCcCchHHHH
Confidence 011122388888 7899999988876665443
No 174
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.49 E-value=2.5e-14 Score=102.89 Aligned_cols=91 Identities=20% Similarity=0.183 Sum_probs=72.0
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.+|++||+||++||++|+.+.|.++++.++++++ +.++.|+++. ..+ .++ ++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~-------~~~----l~~-~~--------------- 80 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NPG----TAP-KY--------------- 80 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CTT----TGG-GG---------------
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCC-------CHH----HHH-Hc---------------
Confidence 5899999999999999999999999999999865 9999998862 111 111 21
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+|...|+++++ ++|+++.++.|..+.+++.+.|++++..
T Consensus 81 -------------------~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (222)
T 3dxb_A 81 -------------------GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLAG 119 (222)
T ss_dssp -------------------TCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred -------------------CCCcCCEEEEE-ECCeEEEEeccccChHHHHHHHHhhccc
Confidence 22233387777 5899999999999999999999998853
No 175
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.49 E-value=7.2e-14 Score=91.78 Aligned_cols=105 Identities=8% Similarity=-0.039 Sum_probs=73.1
Q ss_pred eeeCCCCCeecCCCC-CCcEEEEEEecCCCCCChhhHHHHHHHHHHhcc----CCcEEEEeecCCCCCCCCCChHHHHHH
Q 030881 16 SVKDARGHEVDLSTY-KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD----QGLEILAFPCNQFGEEEPGSNDQIADF 90 (170)
Q Consensus 16 ~l~~~~g~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----~~v~~v~is~d~~~~~~~~~~~~~~~~ 90 (170)
.+..+++..+...-. .++++||+||++||++|+...|.+.++.+++.. .++.++.|+++. . .+.
T Consensus 16 ~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~-------~----~~l 84 (127)
T 3h79_A 16 RVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK-------Y----PDV 84 (127)
T ss_dssp CCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT-------C----HHH
T ss_pred ceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc-------c----HhH
Confidence 344555554432222 489999999999999999999999999988752 248999998762 1 122
Q ss_pred HHhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEE-EEeCCCCCchHHHHHHHHH
Q 030881 91 VCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVV-DRYYPTTSLLSLEHDIKKL 166 (170)
Q Consensus 91 ~~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~-~~~~~~~~~~~l~~~l~~~ 166 (170)
++ +++ |...|+++++.+.+++. ..+.|..+.+++.+.|+++
T Consensus 85 ~~-~~~----------------------------------v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 85 IE-RMR----------------------------------VSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp HH-HTT----------------------------------CCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred HH-hcC----------------------------------CccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 22 322 22223888888776653 5677888888899888764
No 176
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.49 E-value=7.3e-14 Score=90.55 Aligned_cols=90 Identities=16% Similarity=0.128 Sum_probs=62.4
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.|++++|+||++||++|+...|.+.++.++++ ..++.++++. ..+.++..++.+ +++
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~---~~v~~~~~~~-----~~~~~~~~~~~~-~~~-------------- 84 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETK---AHIYFINSEE-----PSQLNDLQAFRS-RYG-------------- 84 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC---CCCEEEETTC-----GGGHHHHHHHHH-HHT--------------
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcC---CeEEEEECCC-----cCcHHHHHHHHH-HcC--------------
Confidence 57899999999999999999999999999875 3344555441 011123333332 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHH
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIK 164 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~ 164 (170)
+...|+++++ ++|+++.++.|..+.+++.+.|+
T Consensus 85 --------------------i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 85 --------------------IPTVPGFVHI-TDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp --------------------CCSSCEEEEE-ETTEEEEECCTTCCHHHHHHHHT
T ss_pred --------------------CCCCCeEEEE-ECCEEEEEecCCCCHHHHHHHhh
Confidence 2223388888 58999999999888877777664
No 177
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.48 E-value=6.3e-14 Score=90.96 Aligned_cols=91 Identities=16% Similarity=0.185 Sum_probs=70.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.++++||+||++||++|+...+.+.++.+++++. +.++.|+++. .. +.++ +++
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~----~~~~-~~~-------------- 81 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATD-LTVAKLDVDT-------NP----ETAR-NFQ-------------- 81 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHHH-HTT--------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH----HHHH-hcC--------------
Confidence 5799999999999999999999999999998754 9999998862 21 1222 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+...|+++++ ++|+++..+.|..+.+++.+.|++++..
T Consensus 82 --------------------i~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 82 --------------------VVSIPTLILF-KDGQPVKRIVGAKGKAALLRELSDVVPN 119 (121)
T ss_dssp --------------------CCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTCSCCCC
T ss_pred --------------------CCcCCEEEEE-ECCEEEEEecCCCCHHHHHHHHHHHHhh
Confidence 2223386666 5999999999988888899988887753
No 178
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.48 E-value=1.4e-13 Score=87.79 Aligned_cols=89 Identities=17% Similarity=0.201 Sum_probs=68.4
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccC--CcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ--GLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~--~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 108 (170)
.++++||+||++||++|+...|.+.++.+++.+. ++.++.|+.+. . . +.++ +++
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~-~---~l~~-~~~------------ 75 (111)
T 3uvt_A 20 AEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA-------E-R---NICS-KYS------------ 75 (111)
T ss_dssp HSSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT-------C-H---HHHH-HTT------------
T ss_pred cCCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc-------c-H---hHHH-hcC------------
Confidence 3789999999999999999999999999988644 68999998762 2 1 2222 322
Q ss_pred CCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHH
Q 030881 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 166 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~ 166 (170)
+...|+++++ ++|+++..+.|..+.+++.+.|++.
T Consensus 76 ----------------------v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 76 ----------------------VRGYPTLLLF-RGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp ----------------------CCSSSEEEEE-ETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred ----------------------CCcccEEEEE-eCCcEEEeccCCcCHHHHHHHHHhc
Confidence 2222376666 7899999999988998899888764
No 179
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.48 E-value=2.6e-14 Score=92.94 Aligned_cols=102 Identities=15% Similarity=0.211 Sum_probs=73.9
Q ss_pred eeCCCCCeecCCC-C--CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHh
Q 030881 17 VKDARGHEVDLST-Y--KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCT 93 (170)
Q Consensus 17 l~~~~g~~~~l~~-~--~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~ 93 (170)
+.+.+|+..++.+ + .|+++||+||++||++|+...|.++++.+++ .++.++.|+++. .. +.++
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~-------~~----~~~~- 70 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDK-------NG----NAAD- 70 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT-------CH----HHHH-
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCC-------CH----HHHH-
Confidence 3455666655653 3 4899999999999999999999999999998 459999999862 21 2222
Q ss_pred hcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECC---CCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 94 RFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDK---NGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 94 ~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~---~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+++ +...|++++++. +|+++.++.|.. ++++++.|++..
T Consensus 71 ~~~----------------------------------i~~~Pt~~~~~~~~~~G~~~~~~~G~~-~~~l~~~~~~~~ 112 (118)
T 2f51_A 71 AYG----------------------------------VSSIPALFFVKKEGNEIKTLDQFVGAD-VSRIKADIEKFK 112 (118)
T ss_dssp HTT----------------------------------CCSSSEEEEEEEETTEEEEEEEEESCC-HHHHHHHHHHHC
T ss_pred hcC----------------------------------CCCCCEEEEEeCCCCcceEEEeecCCC-HHHHHHHHHHhh
Confidence 322 222338888865 499999988854 456888887654
No 180
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.46 E-value=6.1e-14 Score=94.17 Aligned_cols=43 Identities=14% Similarity=-0.042 Sum_probs=39.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.++++||+||++||++|+...|.+.++.+++++. +.++.|++|
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d 64 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDIT 64 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEEEEccc
Confidence 4899999999999999999999999999999654 999999886
No 181
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.46 E-value=7.6e-14 Score=91.43 Aligned_cols=90 Identities=20% Similarity=0.172 Sum_probs=65.6
Q ss_pred CCcEEEEEEecCCCC--------------CChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcC
Q 030881 31 KGKVLLIVNVASKCG--------------MTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK 96 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~--------------~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
.||++||+||++||+ +|+...|.++++.++++++ +.++.|++|. .. +..+ +
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~-~~~~~vd~d~-------~~----~l~~-~-- 84 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP----GTAP-K-- 84 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTS-------CT----TTGG-G--
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH----HHHH-H--
Confidence 589999999999999 9999999999999998764 9999998863 11 0111 1
Q ss_pred CCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 97 SEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 97 ~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+++...|+++++ ++|+++.++.|..+.+++.+.|+++|+
T Consensus 85 --------------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 85 --------------------------------YGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp --------------------------------GTCCBSSEEEEE-ESSSEEEEEESCCCHHHHHHHHTTTCC
T ss_pred --------------------------------cCCCccCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 123333498888 899999999998888889999887763
No 182
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.46 E-value=6.7e-14 Score=90.43 Aligned_cols=92 Identities=17% Similarity=0.196 Sum_probs=69.9
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccC--CcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ--GLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~--~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 108 (170)
++++++|+||++||++|+...|.+.++.+.+++. ++.++.|+.+. .. +.++ +
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-------~~----~~~~-~-------------- 76 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE-------ES----DLAQ-Q-------------- 76 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT-------CC----SSHH-H--------------
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC-------CH----HHHH-H--------------
Confidence 6899999999999999999999999999999764 47888887642 11 1111 1
Q ss_pred CCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEE--EEeCCCCCchHHHHHHHHHhcC
Q 030881 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVV--DRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~--~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+ ++...|+++++ ++|+++ ..+.|..+.+++.+.|++++..
T Consensus 77 ---------~-----------~v~~~Pt~~~~-~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 77 ---------Y-----------GVRGYPTIKFF-RNGDTASPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp ---------H-----------TCCSSSEEEEE-ESSCSSSCEECCCCSSHHHHHHHHHTTSCC
T ss_pred ---------C-----------CCCcccEEEEE-eCCCcCCcccccCccCHHHHHHHHHhccCC
Confidence 1 12223388888 688877 7888888899999999998864
No 183
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.44 E-value=6.1e-14 Score=91.30 Aligned_cols=91 Identities=12% Similarity=0.004 Sum_probs=67.7
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.++++||+||++||++|+...|.++++.+++.+ ++.++.|+++. .. +.++ +++
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~~----~~~~-~~~-------------- 72 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQA-------YP----QTCQ-KAG-------------- 72 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT-------CH----HHHH-HTT--------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcC-------CH----HHHH-HcC--------------
Confidence 578999999999999999999999999999976 49999998862 21 2222 222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC----CCchHHHHHHHHHhcC
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT----TSLLSLEHDIKKLLGL 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~----~~~~~l~~~l~~~l~~ 169 (170)
+...|++++++++|.+ ..+.|. .+.+++.+.|+++++.
T Consensus 73 --------------------v~~~Pt~~~~~~~~~~-~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 73 --------------------IKAYPSVKLYQYERAK-KSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp --------------------CCSSSEEEEEEEEGGG-TEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred --------------------CCccceEEEEeCCCcc-ceeeccccCcCCHHHHHHHHHHHHHh
Confidence 2223388999877763 334443 6888899999988753
No 184
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.44 E-value=7.3e-13 Score=87.81 Aligned_cols=87 Identities=11% Similarity=0.111 Sum_probs=69.1
Q ss_pred cEEEEEEecCCC--CCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 33 KVLLIVNVASKC--GMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 33 k~~lv~f~~~~C--~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
+++||+|||+|| ++|+...|.|.++.++|.++ +.++.|++| +-.+... +|++
T Consensus 34 ~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvD-----------e~~~la~-~ygV------------- 87 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAE-----------AERGLMA-RFGV------------- 87 (137)
T ss_dssp SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGG-----------GHHHHHH-HHTC-------------
T ss_pred CcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECC-----------CCHHHHH-HcCC-------------
Confidence 499999999999 99999999999999999765 999999876 2223332 4332
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
..+ ||++++ +||+++.+..|..+.+++.+.|++++
T Consensus 88 ------------------~si---PTlilF-kdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 88 ------------------AVC---PSLAVV-QPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp ------------------CSS---SEEEEE-ECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred ------------------ccC---CEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 122 275555 89999999999999999999998876
No 185
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.16 E-value=9.5e-15 Score=92.38 Aligned_cols=89 Identities=25% Similarity=0.322 Sum_probs=67.2
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.+++++|+||++||++|....+.++++.+++++ ++.++.|+.+. . .+.++ ++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~--------~---~~~~~-~~--------------- 69 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE--------N---PNTAA-QY--------------- 69 (106)
Confidence 579999999999999999999999999999875 48888887652 1 11111 11
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
++...|+++++ ++|+++..+.|..+.+++.+.|+++|
T Consensus 70 -------------------~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 70 -------------------GIRSIPTLLLF-KNGQVVDRLVGAQPKEALKERIDKHL 106 (106)
Confidence 11222387888 89999999888888888888887764
No 186
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.43 E-value=2.4e-13 Score=98.27 Aligned_cols=104 Identities=14% Similarity=0.167 Sum_probs=75.6
Q ss_pred eeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCC--cEEEEeecCCCCCCCCCChHHHHHHHHhh
Q 030881 17 VKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQG--LEILAFPCNQFGEEEPGSNDQIADFVCTR 94 (170)
Q Consensus 17 l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~--v~~v~is~d~~~~~~~~~~~~~~~~~~~~ 94 (170)
+..+++..+.....+|++++|+||++||++|+...|.+.++.+++++.+ +.++.|+.+. . . +.++ +
T Consensus 17 v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~-------~-~---~l~~-~ 84 (241)
T 3idv_A 17 VLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS-------A-S---VLAS-R 84 (241)
T ss_dssp EEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT-------C-H---HHHH-H
T ss_pred cEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC-------C-H---HHHH-h
Confidence 3344555444333478999999999999999999999999999998775 8899998752 1 1 2222 3
Q ss_pred cCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 95 FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 95 ~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+++ ...|++++++ +|+++ .+.|..+.+++.+.|.+.+.
T Consensus 85 ~~v----------------------------------~~~Pt~~~~~-~g~~~-~~~g~~~~~~l~~~i~~~~~ 122 (241)
T 3idv_A 85 FDV----------------------------------SGYPTIKILK-KGQAV-DYEGSRTQEEIVAKVREVSQ 122 (241)
T ss_dssp TTC----------------------------------CSSSEEEEEE-TTEEE-ECCSCSCHHHHHHHHHHHHS
T ss_pred cCC----------------------------------CcCCEEEEEc-CCCcc-cccCcccHHHHHHHHhhccC
Confidence 222 2223878885 67766 47888899999999988764
No 187
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.43 E-value=7e-13 Score=88.22 Aligned_cols=91 Identities=11% Similarity=0.100 Sum_probs=71.4
Q ss_pred CCcEEEEEEecCC--CCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecC
Q 030881 31 KGKVLLIVNVASK--CGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (170)
Q Consensus 31 ~gk~~lv~f~~~~--C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 108 (170)
.++++||+||++| |++|+...|.|.++.++|.++.+.|+.|++| +-.+... +|++
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD-----------e~~~lA~-~ygV----------- 89 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE-----------QSEAIGD-RFGA----------- 89 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH-----------HHHHHHH-HHTC-----------
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC-----------CCHHHHH-HcCC-----------
Confidence 5678999999999 9999999999999999997644899999765 3333333 4332
Q ss_pred CCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
..|| |++++ ++|+++.+..|..+.+++.+.|+++++
T Consensus 90 --------------------~sIP---TlilF-k~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 90 --------------------FRFP---ATLVF-TGGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp --------------------CSSS---EEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred --------------------ccCC---EEEEE-ECCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 1233 75555 899999999999898999999998875
No 188
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.41 E-value=4.1e-14 Score=92.99 Aligned_cols=90 Identities=20% Similarity=0.269 Sum_probs=67.9
Q ss_pred CCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCC
Q 030881 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (170)
Q Consensus 30 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 109 (170)
..|+++||+||++||++|+...+.++++.++++ ++.++.|+++. ..+ .++ +++
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------~~~----~~~-~~~------------- 86 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDE-------LKE----VAE-KYN------------- 86 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTT-------SGG----GHH-HHT-------------
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccc-------hHH----HHH-HcC-------------
Confidence 358999999999999999999999999999986 59999998752 111 111 211
Q ss_pred CCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+...|+++++ ++|+++.++.| .+.+++.+.|+++++.
T Consensus 87 ---------------------v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 87 ---------------------VEAMPTFLFI-KDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp ---------------------CCSSCCCCBC-TTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred ---------------------CCccceEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 1222375555 89999988888 5788899999998863
No 189
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.39 E-value=1.6e-12 Score=79.03 Aligned_cols=83 Identities=14% Similarity=0.109 Sum_probs=61.6
Q ss_pred EEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCCCch
Q 030881 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHAS 113 (170)
Q Consensus 34 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~ 113 (170)
..|+.||++||++|....|.++++.+++++ ++.++.++++. +. +..+ +
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~----~~~~-~------------------- 50 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMV-------DR----EKAI-E------------------- 50 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTT-------CG----GGGG-G-------------------
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCC-------CH----HHHH-h-------------------
Confidence 468999999999999999999999999975 49999998752 11 1111 1
Q ss_pred hHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 114 PLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 114 ~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
.++...|++++ +|++ ++.|..+.+++.+.|+++++
T Consensus 51 ---------------~~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~le 85 (85)
T 1nho_A 51 ---------------YGLMAVPAIAI---NGVV--RFVGAPSREELFEAINDEME 85 (85)
T ss_dssp ---------------TCSSCSSEEEE---TTTE--EEECSSCCHHHHHHHHHHCC
T ss_pred ---------------CCceeeCEEEE---CCEE--EEccCCCHHHHHHHHHHHhC
Confidence 12223348666 8988 56677788999999998764
No 190
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.39 E-value=7.8e-13 Score=87.93 Aligned_cols=84 Identities=19% Similarity=0.125 Sum_probs=63.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
+|+++||+||++||++|+...|.+.++.+++. ++.++.|+++. .. + +
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~-------~~-------~-~---------------- 75 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNS-------CI-------E-H---------------- 75 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSS-------SC-------S-S----------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhc-------Cc-------c-c----------------
Confidence 46899999999999999999999999999985 49999998762 10 0 1
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCC-------CchHHHHHHHHH
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT-------SLLSLEHDIKKL 166 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~-------~~~~l~~~l~~~ 166 (170)
++|...|+++++. +|+++.++.|.. ..+++++.|.+.
T Consensus 76 ------------------~~i~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 76 ------------------YHDNCLPTIFVYK-NGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp ------------------CCSSCCSEEEEES-SSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred ------------------CCCCCCCEEEEEE-CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 1222334878885 899999887764 566677777654
No 191
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.38 E-value=2.1e-12 Score=78.47 Aligned_cols=83 Identities=17% Similarity=0.159 Sum_probs=61.9
Q ss_pred cEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCCCc
Q 030881 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHA 112 (170)
Q Consensus 33 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~ 112 (170)
.++|+.||++||++|....|.++++.+++++ ++.++.|+.+. +. +..+ +
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~----~~~~-~------------------ 51 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVME-------NP----QKAM-E------------------ 51 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSS-------SC----CTTT-S------------------
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCC-------CH----HHHH-H------------------
Confidence 5789999999999999999999999999874 49999998762 11 0000 1
Q ss_pred hhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 113 SPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
.++...|++++ +|++ .+.|..+.+++.+.|+++|
T Consensus 52 ----------------~~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 52 ----------------YGIMAVPTIVI---NGDV--EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp ----------------TTTCCSSEEEE---TTEE--ECCSSSSSHHHHHHHHHHC
T ss_pred ----------------CCCcccCEEEE---CCEE--eeecCCCHHHHHHHHHHhC
Confidence 12233348666 8988 6778778889999998764
No 192
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.37 E-value=2e-12 Score=86.72 Aligned_cols=89 Identities=10% Similarity=0.110 Sum_probs=60.4
Q ss_pred CcEEEEEEecCC--CCCChhhHHHHHHHHHHhccCCcE--EEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeec
Q 030881 32 GKVLLIVNVASK--CGMTNSNYIELSQLYDKYKDQGLE--ILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDV 107 (170)
Q Consensus 32 gk~~lv~f~~~~--C~~C~~~~~~l~~~~~~~~~~~v~--~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~ 107 (170)
++.+||+||++| |++|+...|.+.++.+++ + ++. ++.|++| +..+.+. +++
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d-----------~~~~la~-~~~----------- 88 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLE-----------QSEAIGD-RFN----------- 88 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHH-----------HHHHHHH-TTT-----------
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECC-----------CCHHHHH-hcC-----------
Confidence 456788899877 999999999999999999 4 488 9999764 2223322 322
Q ss_pred CCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 108 NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
|...||++++ ++|+++.++.|..+.+++.+.|+++++.
T Consensus 89 -----------------------V~~iPT~~~f-k~G~~v~~~~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 89 -----------------------VRRFPATLVF-TDGKLRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp -----------------------CCSSSEEEEE-SCC----CEESCCCHHHHHHHHHHHHC-
T ss_pred -----------------------CCcCCeEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 2233398899 8999999999988888999999988753
No 193
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.36 E-value=4.4e-12 Score=90.95 Aligned_cols=91 Identities=8% Similarity=-0.011 Sum_probs=68.2
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhcc---CCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeec
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD---QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDV 107 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~ 107 (170)
.+++++|.||++||++|+...|.++++..++++ .++.++.|+.+. . . +.++ +++
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~-------~-~---~l~~-~~~----------- 189 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE-------Y-P---EWAD-QYN----------- 189 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG-------C-H---HHHH-HTT-----------
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc-------C-H---HHHH-hCC-----------
Confidence 345559999999999999999999999999973 259999998752 1 1 1222 322
Q ss_pred CCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 108 NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
|...|+++++ ++|+++..+.|..+.+++.+.|+++++
T Consensus 190 -----------------------v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 226 (226)
T 1a8l_A 190 -----------------------VMAVPKIVIQ-VNGEDRVEFEGAYPEKMFLEKLLSALS 226 (226)
T ss_dssp -----------------------CCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred -----------------------CcccCeEEEE-eCCceeEEEcCCCCHHHHHHHHHHhhC
Confidence 2222385555 699999999998888889999988764
No 194
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.36 E-value=1.5e-12 Score=104.23 Aligned_cols=94 Identities=16% Similarity=0.157 Sum_probs=73.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhcc--CCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD--QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 108 (170)
.++++||+|||+||++|+.+.|.+.++++++++ .++.++.|+++. ++..+.++ +++
T Consensus 29 ~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~---------d~~~~l~~-~~~------------ 86 (519)
T 3t58_A 29 SSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE---------ETNSAVCR-EFN------------ 86 (519)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS---------GGGHHHHH-HTT------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc---------cccHHHHH-HcC------------
Confidence 469999999999999999999999999999986 259999998852 12233333 322
Q ss_pred CCCchhHHHHhHhccCCccCCccccCceeEEECC---CCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDK---NGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~---~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
|...|+++++++ +|+++..+.|..+.+++.+.|.+.++
T Consensus 87 ----------------------V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~ 127 (519)
T 3t58_A 87 ----------------------IAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALE 127 (519)
T ss_dssp ----------------------CCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHT
T ss_pred ----------------------CcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHh
Confidence 222338899998 78888888888899999999998875
No 195
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.35 E-value=5.8e-14 Score=95.16 Aligned_cols=91 Identities=15% Similarity=0.101 Sum_probs=58.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHH--HHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLY--DKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~--~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 108 (170)
.||++||+|||+||++|+...|.+.+.. .++.+ ..|+.|.+|. +..+ . ..+
T Consensus 43 ~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~------e~~~-~----~~~-------------- 95 (151)
T 3ph9_A 43 SKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMH------ETTD-K----NLS-------------- 95 (151)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESS------CCSC-G----GGC--------------
T ss_pred cCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecC------Cchh-h----Hhh--------------
Confidence 5899999999999999999999987642 22222 3456666541 0100 0 001
Q ss_pred CCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCC-------CCch---HHHHHHHHHhc
Q 030881 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPT-------TSLL---SLEHDIKKLLG 168 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~-------~~~~---~l~~~l~~~l~ 168 (170)
.++...|++++++++|+++.+..|. ..++ .+.+.++++++
T Consensus 96 --------------------~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al~ 145 (151)
T 3ph9_A 96 --------------------PDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKALR 145 (151)
T ss_dssp --------------------TTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHHS
T ss_pred --------------------cCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHHH
Confidence 1112223999999999999998887 3344 46666666654
No 196
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.34 E-value=2.3e-12 Score=89.07 Aligned_cols=49 Identities=8% Similarity=0.041 Sum_probs=36.0
Q ss_pred ecCCCCCCcEEEEEEecCCCCCChhhHHH---HHHHHHHhccCCcEEEEeecC
Q 030881 25 VDLSTYKGKVLLIVNVASKCGMTNSNYIE---LSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 25 ~~l~~~~gk~~lv~f~~~~C~~C~~~~~~---l~~~~~~~~~~~v~~v~is~d 74 (170)
+..+...||+|||+||++||++|+.+.+. ..++.+.+++ ++.++.|+.+
T Consensus 32 ~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~d 83 (173)
T 3ira_A 32 FEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDRE 83 (173)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETT
T ss_pred HHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCc
Confidence 33344479999999999999999998873 2455555544 3888888765
No 197
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.33 E-value=3.7e-12 Score=92.63 Aligned_cols=92 Identities=16% Similarity=0.140 Sum_probs=67.1
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhcc--CCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD--QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 108 (170)
.++++||+||++||++|+...|.+.++++++++ .++.++.|+++. +...+.++ +++
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~---------~~~~~l~~-~~~------------ 86 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE---------ETNSAVCR-DFN------------ 86 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS---------TTTHHHHH-HTT------------
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc---------hhhHHHHH-HcC------------
Confidence 469999999999999999999999999999986 369999999852 11123332 322
Q ss_pred CCCchhHHHHhHhccCCccCCccccCceeEEECCC-----CcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKN-----GQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~-----G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
|...|+++++++. |..+ .+.| .+.+.+.+.|.+++.
T Consensus 87 ----------------------v~~~Pt~~~~~~g~~~~~g~~~-~~~g-~~~~~l~~~i~~~l~ 127 (244)
T 3q6o_A 87 ----------------------IPGFPTVRFFXAFTXNGSGAVF-PVAG-ADVQTLRERLIDALE 127 (244)
T ss_dssp ----------------------CCSSSEEEEECTTCCSSSCEEC-CCTT-CCHHHHHHHHHHHHH
T ss_pred ----------------------CCccCEEEEEeCCCcCCCCeeE-ecCC-CCHHHHHHHHHHHHH
Confidence 2223388888862 4444 4555 588889999988874
No 198
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.27 E-value=1.7e-11 Score=91.90 Aligned_cols=93 Identities=9% Similarity=0.095 Sum_probs=68.1
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.++++||+||++||++|+...|.+.++.+++.+. +.++.|++|. +. ..+.++ ++++
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~------~~---~~~l~~-~~~I------------- 89 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDL------NK---NKALCA-KYDV------------- 89 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTS------TT---THHHHH-HTTC-------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccC------cc---CHHHHH-hCCC-------------
Confidence 4789999999999999999999999999999765 8999998862 11 123332 4332
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCC----------------cEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNG----------------QVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G----------------~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
...|+++++++.+ .....|.|..+.+.+.+.|.+.+.
T Consensus 90 ---------------------~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~ 142 (298)
T 3ed3_A 90 ---------------------NGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIR 142 (298)
T ss_dssp ---------------------CBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCC
T ss_pred ---------------------CccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcc
Confidence 2223667776432 245668888899999999887764
No 199
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.27 E-value=9.8e-12 Score=79.37 Aligned_cols=87 Identities=11% Similarity=0.285 Sum_probs=62.2
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.+++++|+|+++||++|+...|.++++.++ .++.++.|.+| ...++-..++++++
T Consensus 23 ~~~~vvi~khatwCgpc~~~~~~~e~~~~~---~~v~~~~vdVd--------e~r~~Sn~IA~~~~-------------- 77 (112)
T 3iv4_A 23 ENKYVFVLKHSETCPISANAYDQFNKFLYE---RDMDGYYLIVQ--------QERDLSDYIAKKTN-------------- 77 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGG--------GGHHHHHHHHHHHT--------------
T ss_pred cCCCEEEEEECCcCHhHHHHHHHHHHHhcc---CCceEEEEEee--------cCchhhHHHHHHhC--------------
Confidence 379999999999999999999999999885 34999999886 23333233333433
Q ss_pred CchhHHHHhHhccCCccCCcccc-CceeEEECCCCcEEEE-eCCCCCchHHHHHH
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQW-NFAKFLVDKNGQVVDR-YYPTTSLLSLEHDI 163 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~-~p~~~lid~~G~i~~~-~~~~~~~~~l~~~l 163 (170)
|.| .|+++++ +||++++. ..+..+.+.+.+.|
T Consensus 78 --------------------V~h~sPq~il~-k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 78 --------------------VKHESPQAFYF-VNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp --------------------CCCCSSEEEEE-ETTEEEEEEEGGGCSHHHHHHHT
T ss_pred --------------------CccCCCeEEEE-ECCEEEEEeeccccCHHHHHHhh
Confidence 332 3476666 79999998 55556666666544
No 200
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.25 E-value=9.1e-12 Score=96.29 Aligned_cols=105 Identities=18% Similarity=0.234 Sum_probs=74.3
Q ss_pred eeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhcc-----CCcEEEEeecCCCCCCCCCChHHHHHHH
Q 030881 17 VKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD-----QGLEILAFPCNQFGEEEPGSNDQIADFV 91 (170)
Q Consensus 17 l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-----~~v~~v~is~d~~~~~~~~~~~~~~~~~ 91 (170)
+.++++..+...--.++++||.||++||++|+...|.+.++++++++ .++.++.|+++. . .+.+
T Consensus 7 v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~-------~----~~l~ 75 (382)
T 2r2j_A 7 ITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQ-------H----SDIA 75 (382)
T ss_dssp -CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTT-------C----HHHH
T ss_pred eEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCc-------c----HHHH
Confidence 33445544432112579999999999999999999999999999853 249999998762 1 2233
Q ss_pred HhhcCCCCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEE-eCCCCCchHHHHHHHHHhc
Q 030881 92 CTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDR-YYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 92 ~~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~-~~~~~~~~~l~~~l~~~l~ 168 (170)
+ ++++ ...|+++++ ++|+++.+ +.|..+.+.+.+.|.+.+.
T Consensus 76 ~-~~~v----------------------------------~~~Pt~~~f-~~G~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (382)
T 2r2j_A 76 Q-RYRI----------------------------------SKYPTLKLF-RNGMMMKREYRGQRSVKALADYIRQQKS 117 (382)
T ss_dssp H-HTTC----------------------------------CEESEEEEE-ETTEEEEEECCSCCSHHHHHHHHHHHHS
T ss_pred H-hcCC----------------------------------CcCCEEEEE-eCCcEeeeeecCcchHHHHHHHHHHhcc
Confidence 2 4332 122376655 68988874 8898899999999988774
No 201
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.25 E-value=7.6e-11 Score=85.83 Aligned_cols=89 Identities=11% Similarity=0.071 Sum_probs=65.5
Q ss_pred CCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhcc---CCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEe
Q 030881 29 TYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKD---QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKI 105 (170)
Q Consensus 29 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 105 (170)
+++|+++|+.||++||++|+...|.++++..++++ .++.+..|+.+. .+ +.+. +++
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~-------~~----~~~~-~~~--------- 193 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYE-------NP----DIAD-KYG--------- 193 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTT-------CH----HHHH-HTT---------
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECcc-------CH----HHHH-HcC---------
Confidence 35688999999999999999999999999999842 469999998752 11 1121 222
Q ss_pred ecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 106 DVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 106 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
|...|++++ +|+++ +.|..+.+++.+.|++.+.
T Consensus 194 -------------------------V~~vPt~~i---~G~~~--~~G~~~~~~l~~~l~~~~~ 226 (243)
T 2hls_A 194 -------------------------VMSVPSIAI---NGYLV--FVGVPYEEDFLDYVKSAAE 226 (243)
T ss_dssp -------------------------CCSSSEEEE---TTEEE--EESCCCHHHHHHHHHHHHT
T ss_pred -------------------------CeeeCeEEE---CCEEE--EeCCCCHHHHHHHHHHHhh
Confidence 222238676 78876 5677888899999988874
No 202
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.25 E-value=1.4e-11 Score=89.70 Aligned_cols=42 Identities=10% Similarity=0.016 Sum_probs=38.4
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
+|+++||+||++||++|....|.|.+++.+|.+ +.|+.|+++
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d 173 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKAS 173 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHH
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCC
Confidence 489999999999999999999999999999964 999999753
No 203
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.24 E-value=2.1e-11 Score=88.05 Aligned_cols=90 Identities=13% Similarity=0.180 Sum_probs=68.9
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCC--cEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQG--LEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~--v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 108 (170)
.+++++|+||++||++|+...|.+.++.+++.+++ +.++.|+.+. . . +.++ ++++
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~-------~-~---~l~~-~~~v----------- 202 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA-------E-T---DLAK-RFDV----------- 202 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT-------C-H---HHHH-HTTC-----------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC-------C-H---HHHH-HcCC-----------
Confidence 57899999999999999999999999999997654 8999998752 1 1 2222 3222
Q ss_pred CCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
...|+++++. +|+.+. +.|..+.+++.+.|++.+.
T Consensus 203 -----------------------~~~Pt~~~~~-~g~~~~-~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 203 -----------------------SGYPTLKIFR-KGRPYD-YNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp -----------------------CSSSEEEEEE-TTEEEE-CCSCCSHHHHHHHHHHHTT
T ss_pred -----------------------cccCEEEEEE-CCeEEE-ecCCCCHHHHHHHHHhhhC
Confidence 2223777775 587776 7888899999999988764
No 204
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.24 E-value=2.8e-11 Score=78.60 Aligned_cols=41 Identities=20% Similarity=0.072 Sum_probs=37.7
Q ss_pred CcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 32 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
++++||+||++||++|+...|.|.++.+++.+ +.|+.|+.|
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d 63 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVN 63 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGG
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhH
Confidence 45999999999999999999999999999964 999999875
No 205
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.23 E-value=4.7e-11 Score=91.22 Aligned_cols=89 Identities=9% Similarity=0.055 Sum_probs=67.4
Q ss_pred CCcEEEEEEecCCCCCChhhHHH-------HHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceE
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIE-------LSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFE 103 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~-------l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 103 (170)
.++++||+|||+||+ |+...|. +.++.+.+++.++.++.|+++. . . +.++ ++++
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~-------~-~---~l~~-~~~v------ 87 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK-------E-A---KLAK-KLGF------ 87 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTT-------T-H---HHHH-HHTC------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCC-------C-H---HHHH-hcCC------
Confidence 578999999999999 9888888 8889999887789999999862 1 1 2232 3222
Q ss_pred EeecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 104 KIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 104 ~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
...||++++ ++|+ ...+.|..+.+.+.+.|++.+.
T Consensus 88 ----------------------------~~~Pt~~~~-~~g~-~~~~~G~~~~~~l~~~i~~~~~ 122 (350)
T 1sji_A 88 ----------------------------DEEGSLYVL-KGDR-TIEFDGEFAADVLVEFLLDLIE 122 (350)
T ss_dssp ----------------------------CSTTEEEEE-ETTE-EEEECSCCCHHHHHHHHHTTSS
T ss_pred ----------------------------CccceEEEE-ECCc-EEEecCCCCHHHHHHHHHHhcC
Confidence 122377777 6788 4578888899999999887764
No 206
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.22 E-value=1.7e-11 Score=97.21 Aligned_cols=91 Identities=13% Similarity=0.138 Sum_probs=70.4
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccC-CcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ-GLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 109 (170)
.||++||+||++||++|+...|.+.++.+.+++. ++.++.|+.+. + + ... +
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~-------~--~---~~~-~--------------- 420 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA-------N--D---VPS-P--------------- 420 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS-------S--C---CCT-T---------------
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc-------h--h---hHh-h---------------
Confidence 4899999999999999999999999999999875 68888887642 0 0 000 1
Q ss_pred CCchhHHHHhHhccCCccCCccccCceeEEECCCCcE-EEEeCCCCCchHHHHHHHHHhc
Q 030881 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQV-VDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i-~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
.++...|++++++++|++ +..+.|..+.+++.+.|++.+.
T Consensus 421 -------------------~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~ 461 (481)
T 3f8u_A 421 -------------------YEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREAT 461 (481)
T ss_dssp -------------------CCCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCS
T ss_pred -------------------CCCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcC
Confidence 122333499999988874 6668888899999999988764
No 207
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.21 E-value=3.2e-11 Score=96.26 Aligned_cols=91 Identities=12% Similarity=0.118 Sum_probs=71.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.+++++|.||++||++|+...|.+.++.+++++.++.++.|+++. . .+.++ ++++
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~-------~----~~l~~-~~~v------------- 84 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE-------N----QDLCM-EHNI------------- 84 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTT-------C----HHHHH-HTTC-------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCC-------C----HHHHH-hcCC-------------
Confidence 579999999999999999999999999999987779999999862 2 23333 4332
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcE--EEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQV--VDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i--~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
...|+++++. +|++ +..+.|..+.+.+.+.|.+.+.
T Consensus 85 ---------------------~~~Pt~~~~~-~g~~~~~~~~~G~~~~~~l~~~l~~~~~ 122 (504)
T 2b5e_A 85 ---------------------PGFPSLKIFK-NSDVNNSIDYEGPRTAEAIVQFMIKQSQ 122 (504)
T ss_dssp ---------------------CSSSEEEEEE-TTCTTCEEECCSCCSHHHHHHHHHHHTS
T ss_pred ---------------------CcCCEEEEEe-CCccccceeecCCCCHHHHHHHHHHhcC
Confidence 2223767774 5776 7788898899999999988764
No 208
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.20 E-value=2.9e-11 Score=86.60 Aligned_cols=41 Identities=10% Similarity=0.037 Sum_probs=37.3
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeec
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~ 73 (170)
+|+++||+||++||++|+...|.+.++..++. ++.|+.|++
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~ 159 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRA 159 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEH
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEEC
Confidence 46899999999999999999999999999985 499999974
No 209
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.18 E-value=5.4e-11 Score=94.38 Aligned_cols=90 Identities=14% Similarity=0.210 Sum_probs=70.9
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.|+++||+||++||++|+...|.+.++++++++. +.++.|+++. . .+.++ ++++
T Consensus 20 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~--------~---~~l~~-~~~v------------- 73 (481)
T 3f8u_A 20 SAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTA--------N---TNTCN-KYGV------------- 73 (481)
T ss_dssp SSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTT--------C---HHHHH-HTTC-------------
T ss_pred CCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCC--------C---HHHHH-hcCC-------------
Confidence 4499999999999999999999999999999877 9999998862 1 12232 4332
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
...|+++++ ++|+++..+.|..+.+.+.+.|.+.+.
T Consensus 74 ---------------------~~~Ptl~~~-~~g~~~~~~~G~~~~~~l~~~~~~~~~ 109 (481)
T 3f8u_A 74 ---------------------SGYPTLKIF-RDGEEAGAYDGPRTADGIVSHLKKQAG 109 (481)
T ss_dssp ---------------------CEESEEEEE-ETTEEEEECCSCSSHHHHHHHHHHHTS
T ss_pred ---------------------CCCCEEEEE-eCCceeeeecCccCHHHHHHHHHhhcc
Confidence 222376666 789888889999999999999988764
No 210
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.18 E-value=1.6e-11 Score=79.26 Aligned_cols=94 Identities=10% Similarity=0.049 Sum_probs=61.7
Q ss_pred CCCcEEEEEEecCCCCCChhhHHHHHHHHHHhc-cCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecC
Q 030881 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYK-DQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (170)
Q Consensus 30 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 108 (170)
-+...+||+||++||++|+...+.+...++... .+.+.++.|+++. +... .....
T Consensus 16 ~~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~------~~~~--------~la~~---------- 71 (116)
T 3dml_A 16 DKAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRD------PLPP--------GLELA---------- 71 (116)
T ss_dssp ---CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTS------CCCT--------TCBCS----------
T ss_pred ccCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCC------CCch--------hHHHH----------
Confidence 355789999999999999998865544332211 1126677777652 0000 00000
Q ss_pred CCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+.|...||+++++ +|+.+.+..|..+++.+.+.|++++.
T Consensus 72 --------------------~~V~g~PT~i~f~-~G~ev~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 72 --------------------RPVTFTPTFVLMA-GDVESGRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp --------------------SCCCSSSEEEEEE-TTEEEEEEECCCCHHHHHHHHHHHHH
T ss_pred --------------------CCCCCCCEEEEEE-CCEEEeeecCCCCHHHHHHHHHHHHh
Confidence 1233334999998 99999999999999999999998874
No 211
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.14 E-value=3.5e-10 Score=76.60 Aligned_cols=92 Identities=12% Similarity=0.078 Sum_probs=63.1
Q ss_pred CCcEEEEEEecCCCCCChhhHHHH---HHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeec
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDV 107 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~ 107 (170)
.||+++|+|+++||..|+.+...+ .++.+.+++ ++.++.++.+ + .+-.++.+ +|++
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~--------~-~~~~~l~~-~y~v---------- 99 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHD--------S-EEGQRYIQ-FYKL---------- 99 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESS--------S-HHHHHHHH-HHTC----------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecC--------C-HhHHHHHH-HcCC----------
Confidence 489999999999999999986544 334444332 3777777664 2 22334443 3222
Q ss_pred CCCCchhHHHHhHhccCCccCCccccCceeEEECCC-CcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 108 NGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKN-GQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~-G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
...|++++||++ |+.+....| .+++++.+.|++++.
T Consensus 100 ------------------------~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 100 ------------------------GDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFLG 136 (153)
T ss_dssp ------------------------CSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHHH
T ss_pred ------------------------CCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHHH
Confidence 122388999998 877777666 799999999988874
No 212
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.14 E-value=7.5e-13 Score=84.50 Aligned_cols=39 Identities=13% Similarity=0.054 Sum_probs=34.0
Q ss_pred eecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhc
Q 030881 24 EVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYK 62 (170)
Q Consensus 24 ~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~ 62 (170)
.+++++..|+.+||.||++||++|+.+.|.+.++.++++
T Consensus 4 ~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~ 42 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP 42 (106)
T ss_dssp HHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC
T ss_pred hhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 456777788999999999999999999999999886653
No 213
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.13 E-value=5.2e-10 Score=66.51 Aligned_cols=37 Identities=8% Similarity=-0.021 Sum_probs=32.0
Q ss_pred EEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEee
Q 030881 35 LLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFP 72 (170)
Q Consensus 35 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is 72 (170)
..|.||++||++|+...|.++++.+++.. ++.++.|+
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~ 38 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKIK 38 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEec
Confidence 46899999999999999999999999864 38888774
No 214
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.11 E-value=2.2e-10 Score=95.80 Aligned_cols=93 Identities=13% Similarity=0.093 Sum_probs=71.1
Q ss_pred CCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEee
Q 030881 27 LSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKID 106 (170)
Q Consensus 27 l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d 106 (170)
++++.|++++|.||++||++|....|.+++++++++++ +.++.|+++. . .+ .++ .+++
T Consensus 450 ~~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~-v~~~~vd~~~-------~-~~---~~~-~~~v--------- 507 (780)
T 3apo_A 450 FPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ-LKVGTLDCTI-------H-EG---LCN-MYNI--------- 507 (780)
T ss_dssp SCTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------C-HH---HHH-HTTC---------
T ss_pred HHHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEeCCC-------C-HH---HHH-HcCC---------
Confidence 34458899999999999999999999999999999764 9999998762 2 22 222 3222
Q ss_pred cCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 107 VNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
...|+++++ ++|++ +.+.|..+.+++.+.|++++.
T Consensus 508 -------------------------~~~Pt~~~~-~~g~~-~~~~g~~~~~~l~~fi~~~~~ 542 (780)
T 3apo_A 508 -------------------------QAYPTTVVF-NQSSI-HEYEGHHSAEQILEFIEDLRN 542 (780)
T ss_dssp -------------------------CSSSEEEEE-ETTEE-EEECSCSCHHHHHHHHHHHHS
T ss_pred -------------------------CcCCeEEEE-cCCce-eeecCcccHHHHHHHHHhhcc
Confidence 112388888 45876 678888899999999988775
No 215
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.10 E-value=2.9e-10 Score=81.61 Aligned_cols=86 Identities=12% Similarity=0.075 Sum_probs=62.5
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.++++|++||++||++|+...|.++++..++. ++.++.|+.+. . . +.++ +++
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~-------~-~---~l~~-~~~-------------- 186 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDASE-------N-Q---DLAE-QFQ-------------- 186 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGG-------C-H---HHHH-HTT--------------
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCC-------C-H---HHHH-HcC--------------
Confidence 34566899999999999999999999999983 59999998752 1 1 1222 322
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
|...|++++ +|++ .++.|..+.+++.+.|+++++
T Consensus 187 --------------------v~~~Pt~~~---~G~~-~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 187 --------------------VVGVPKIVI---NKGV-AEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp --------------------CCSSSEEEE---GGGT-EEEESCCCHHHHHHHHHHHHH
T ss_pred --------------------CcccCEEEE---CCEE-EEeeCCCCHHHHHHHHHHHhh
Confidence 222237666 7884 557788888889999887764
No 216
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.09 E-value=9.1e-11 Score=76.51 Aligned_cols=46 Identities=11% Similarity=0.081 Sum_probs=40.7
Q ss_pred CCCCCcEEEEEEecC-------CCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 28 STYKGKVLLIVNVAS-------KCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 28 ~~~~gk~~lv~f~~~-------~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.+.+|++++|+||++ ||++|+...|.+.++.+++++ ++.++.|+++
T Consensus 20 ~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~ 72 (123)
T 1wou_A 20 EQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVG 72 (123)
T ss_dssp HTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECC
T ss_pred HHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECC
Confidence 334589999999999 999999999999999999865 5999999885
No 217
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.09 E-value=1.6e-10 Score=88.47 Aligned_cols=89 Identities=15% Similarity=0.112 Sum_probs=67.5
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccC-CcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ-GLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNG 109 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 109 (170)
.+++++|+||++||++|+...|.+.++.++++++ ++.++.|+.+. .. +. ++
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~-------~~------~~-~~-------------- 317 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA-------NE------VE-AV-------------- 317 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT-------CB------CS-SC--------------
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc-------cc------hh-hc--------------
Confidence 5899999999999999999999999999999875 58888887642 11 11 11
Q ss_pred CCchhHHHHhHhccCCccCCccccCceeEEECCC-CcEEEEeCCCCCchHHHHHHHHHh
Q 030881 110 EHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKN-GQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~-G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+|...|+++++.++ |+....+.|..+.+++.+.|++.-
T Consensus 318 --------------------~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 318 --------------------KVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGG 356 (361)
T ss_dssp --------------------CCCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTTS
T ss_pred --------------------CCcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHhcC
Confidence 22223498999655 677788888888888888887653
No 218
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.03 E-value=5.5e-10 Score=87.99 Aligned_cols=44 Identities=14% Similarity=0.118 Sum_probs=39.4
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccC-------CcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ-------GLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-------~v~~v~is~d 74 (170)
.+|++||+|||+||++|+.+.|.+.++++++++. .+.++.|+++
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d 91 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA 91 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC
Confidence 4489999999999999999999999999999743 2999999986
No 219
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.03 E-value=5.8e-10 Score=88.99 Aligned_cols=89 Identities=21% Similarity=0.117 Sum_probs=66.0
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhc-c-CCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYK-D-QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVN 108 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~-~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 108 (170)
.++++||+||++||++|+...|.+.++.++++ . .++.++.++.+. + . ...
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~-------~----------~-~~~---------- 426 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTE-------N----------D-VRG---------- 426 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGG-------C----------C-CSS----------
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCc-------c----------c-ccc----------
Confidence 47999999999999999999999999999987 2 258888876531 0 0 000
Q ss_pred CCCchhHHHHhHhccCCccCCccccCceeEEECCCCcE--EEEeCCCCCchHHHHHHHHHhc
Q 030881 109 GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQV--VDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i--~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
..|...||++++ ++|+. +..+.|..+.+++.+.|++.+.
T Consensus 427 --------------------~~v~~~Pt~~~~-~~G~~~~~~~~~G~~~~~~l~~~i~~~~~ 467 (504)
T 2b5e_A 427 --------------------VVIEGYPTIVLY-PGGKKSESVVYQGSRSLDSLFDFIKENGH 467 (504)
T ss_dssp --------------------CCCSSSSEEEEE-CCTTSCCCCBCCSCCCHHHHHHHHHHHCT
T ss_pred --------------------CCceecCeEEEE-eCCceecceEecCCCCHHHHHHHHHhcCC
Confidence 012223387888 78876 6668888888999999988764
No 220
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.02 E-value=2.6e-10 Score=78.67 Aligned_cols=50 Identities=14% Similarity=0.163 Sum_probs=40.9
Q ss_pred CCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeec
Q 030881 22 GHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (170)
Q Consensus 22 g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~ 73 (170)
+....+.+..++++|+.||..|||+|....+.+.++.+++.+ +.++...+
T Consensus 12 ~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~ 61 (175)
T 3gyk_A 12 PNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYREW 61 (175)
T ss_dssp TTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEEC
T ss_pred CCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEeC
Confidence 444556777899999999999999999999999999998765 55555554
No 221
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.02 E-value=1.7e-10 Score=96.50 Aligned_cols=91 Identities=11% Similarity=-0.029 Sum_probs=68.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.|+++||+||++||++|+...|.+.++.+++++ ++.++.|+++. . .. .++ ++++
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~-------~-~~---~~~-~~~v------------- 727 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQA-------Y-PQ---TCQ-KAGI------------- 727 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT-------C-HH---HHH-HTTC-------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCC-------C-HH---HHH-hcCC-------------
Confidence 578999999999999999999999999999976 49999998762 1 11 222 3222
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCC----CCCchHHHHHHHHHhcC
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYP----TTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~----~~~~~~l~~~l~~~l~~ 169 (170)
...|+++++ ++|+++.++.| ..+.+++.+.|++++++
T Consensus 728 ---------------------~~~Pt~~~~-~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 728 ---------------------KAYPSVKLY-QYERAKKSIWEEQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp ---------------------CSSSEEEEE-EEETTTTEEEEEEECCCCHHHHHHHHHHHTTC
T ss_pred ---------------------CcCCEEEEE-cCCCccccccCcccCCcCHHHHHHHHHHHHHH
Confidence 222387888 78887765555 46888899999988853
No 222
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.98 E-value=3.4e-09 Score=81.51 Aligned_cols=90 Identities=13% Similarity=0.092 Sum_probs=65.2
Q ss_pred CCcEEEEEEecCCCCCChhhH------HHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEE
Q 030881 31 KGKVLLIVNVASKCGMTNSNY------IELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEK 104 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~------~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 104 (170)
.++++||.|||+||++|...- |.++++...+++.++.++.|+++. . . +.++ ++++
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~-------~-~---~l~~-~~~V------- 89 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEK-------D-A---AVAK-KLGL------- 89 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTT-------T-H---HHHH-HHTC-------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcc-------c-H---HHHH-HcCC-------
Confidence 478999999999999974332 578889988887779999998862 1 2 2332 4332
Q ss_pred eecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 105 IDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 105 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
...||++++. +|+++ .+.|..+.+.+.+.|.+.+.
T Consensus 90 ---------------------------~~~PTl~~f~-~G~~~-~y~G~~~~~~i~~~i~~~~~ 124 (367)
T 3us3_A 90 ---------------------------TEEDSIYVFK-EDEVI-EYDGEFSADTLVEFLLDVLE 124 (367)
T ss_dssp ---------------------------CSTTEEEEEE-TTEEE-ECCSCCSHHHHHHHHHHHHS
T ss_pred ---------------------------CcCceEEEEE-CCcEE-EeCCCCCHHHHHHHHHHhcC
Confidence 1122766665 68775 68888899999999988764
No 223
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.87 E-value=7.3e-09 Score=71.67 Aligned_cols=44 Identities=9% Similarity=0.068 Sum_probs=38.2
Q ss_pred CCcEEEEEEec-------CCCCCChhhHHHHHHHHHHhcc----CCcEEEEeecC
Q 030881 31 KGKVLLIVNVA-------SKCGMTNSNYIELSQLYDKYKD----QGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~-------~~C~~C~~~~~~l~~~~~~~~~----~~v~~v~is~d 74 (170)
++.++||.||| .||++|+...|.+.++.+++.. ..+.|..|++|
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d 90 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVN 90 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECc
Confidence 46799999999 4999999999999999999971 23999999886
No 224
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.86 E-value=3.1e-09 Score=74.51 Aligned_cols=43 Identities=12% Similarity=0.112 Sum_probs=39.0
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.++++|+.||..|||+|....+.+.++.+++.+ ++.+..+.++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 589999999999999999999999999999876 4888888875
No 225
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.86 E-value=4.7e-09 Score=69.26 Aligned_cols=92 Identities=7% Similarity=0.040 Sum_probs=66.8
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGE 110 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 110 (170)
.+.++++.||++ |++|....|.|.+++++|+++ +.|+.++.|. .+ + .+ +++++.
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~-------~~-~---~a-~~~gi~------------ 75 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKA-------FG-A---HA-GNLNLK------------ 75 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTT-------TG-G---GT-TTTTCC------------
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHH-------hH-H---HH-HHcCCC------------
Confidence 457999999999 899999999999999999876 9999998762 11 1 11 132221
Q ss_pred CchhHHHHhHhccCCccCCccccCceeEEECC-CCcEEEEeC--CCCCchHHHHHHHHHhcC
Q 030881 111 HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDK-NGQVVDRYY--PTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~-~G~i~~~~~--~~~~~~~l~~~l~~~l~~ 169 (170)
. ..+| ++++++. +|+. +... |..+.+.+.+.|++++.+
T Consensus 76 -----------~------~~iP---tl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l~G 116 (133)
T 2djk_A 76 -----------T------DKFP---AFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDDFVAG 116 (133)
T ss_dssp -----------S------SSSS---EEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHHHHHT
T ss_pred -----------c------ccCC---EEEEEecCcCcc-cCCCCccccCHHHHHHHHHHHHcC
Confidence 0 1133 8788874 5776 5654 888888999999988754
No 226
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.79 E-value=1.6e-09 Score=69.64 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=28.1
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
+++++++ ||++||++|+...+.|+++..+ +.++.|+.+
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~ 55 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDEL 55 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGS
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCC
Confidence 4566666 9999999999999988887433 456666543
No 227
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.78 E-value=4.2e-09 Score=73.64 Aligned_cols=43 Identities=12% Similarity=0.141 Sum_probs=38.1
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.++++|+.||..|||+|....+.+.++.+++.+ ++.+.-+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEehh
Confidence 689999999999999999999999999999877 5888777653
No 228
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.73 E-value=8.7e-09 Score=73.56 Aligned_cols=45 Identities=11% Similarity=0.158 Sum_probs=36.2
Q ss_pred cCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 26 DLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 26 ~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.+...+|+++|+.||++|||+|+...+.+.++.+. ++.++.+.+.
T Consensus 80 ~~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~p 124 (216)
T 1eej_A 80 VYKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAFP 124 (216)
T ss_dssp EECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECC
T ss_pred eecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEECC
Confidence 34445689999999999999999999999988652 5777777653
No 229
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.73 E-value=1.3e-08 Score=62.25 Aligned_cols=75 Identities=9% Similarity=0.044 Sum_probs=50.2
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCCCchhH
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPL 115 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~ 115 (170)
|+.||++||++|....+.|.++..++ +..|++|. +++ + .+ +++..
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~-------~~~-l---~~-~~g~~----------------- 47 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDD-------DAA-L---ES-AYGLR----------------- 47 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTT-------CHH-H---HH-HHTTT-----------------
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCC-------CHH-H---HH-HhCCC-----------------
Confidence 78899999999999999887765442 45677652 232 2 21 32322
Q ss_pred HHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 116 YKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 116 ~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
|| ++++ .+|+.+. |..+.+++.+.|++.+.
T Consensus 48 ---------------vP---tl~~--~~G~~v~---g~~~~~~L~~~l~~~~~ 77 (87)
T 1ttz_A 48 ---------------VP---VLRD--PMGRELD---WPFDAPRLRAWLDAAPH 77 (87)
T ss_dssp ---------------CS---EEEC--TTCCEEE---SCCCHHHHHHHHHTCC-
T ss_pred ---------------cC---eEEE--ECCEEEe---CCCCHHHHHHHHHHHHH
Confidence 22 5444 6788875 67788889999987664
No 230
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.72 E-value=2.6e-08 Score=69.69 Aligned_cols=42 Identities=12% Similarity=-0.020 Sum_probs=37.2
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeec
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~ 73 (170)
.++++|++||..|||+|....+.|.++.++++. .+.+..+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 579999999999999999999999999999865 488877765
No 231
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.70 E-value=1.2e-07 Score=67.66 Aligned_cols=44 Identities=18% Similarity=0.142 Sum_probs=36.7
Q ss_pred CCCCcEEEEEEecC-CCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 29 TYKGKVLLIVNVAS-KCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 29 ~~~gk~~lv~f~~~-~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
...++++|++||++ ||++|....|.+.++.+.. .++.++.|+++
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~--~~v~~~~vd~~ 63 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLKQLVQELSELT--DKLSYEIVDFD 63 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTTC--TTEEEEEEETT
T ss_pred hcCCCeEEEEEecCCCCchhHHHHHHHHHHHhhC--CceEEEEEeCC
Confidence 34567889999999 9999999999999988652 24999999875
No 232
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.63 E-value=1.1e-07 Score=60.34 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=33.9
Q ss_pred cEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 33 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
...|+.||++||++|....+.|.++.+++ ++.+..|+++
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId 67 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKS---WFELEVINID 67 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHS---CCCCEEEETT
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhc---CCeEEEEECC
Confidence 36799999999999999999999998885 4788888876
No 233
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.53 E-value=3.2e-07 Score=65.63 Aligned_cols=91 Identities=9% Similarity=0.073 Sum_probs=60.9
Q ss_pred CCCcEEEEEE----ecCCCCCChhhHHHHHHHHHHhcc-CCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEE
Q 030881 30 YKGKVLLIVN----VASKCGMTNSNYIELSQLYDKYKD-QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEK 104 (170)
Q Consensus 30 ~~gk~~lv~f----~~~~C~~C~~~~~~l~~~~~~~~~-~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 104 (170)
..+.++|+.| |++||++|...+|.+.++++++.+ ..+.+..|+++. . .+.++ ++++
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~--------~---~~l~~-~~~v------- 79 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFT--------H---KEETE-KYGV------- 79 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTT--------C---HHHHH-HTTC-------
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcc--------c---HHHHH-HcCC-------
Confidence 3445566666 588899999999999999888843 248998987652 1 23333 4333
Q ss_pred eecCCCCchhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 105 IDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 105 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
...|++.++. +|.....+.|....+++.+.+..++
T Consensus 80 ---------------------------~~~Ptl~~~~-~~~~~~~~~G~~~~~~l~~~~~~~~ 114 (229)
T 2ywm_A 80 ---------------------------DRVPTIVIEG-DKDYGIRYIGLPAGLEFTTLINGIF 114 (229)
T ss_dssp ---------------------------CBSSEEEEES-SSCCCEEEESCCCTTHHHHHHHHHH
T ss_pred ---------------------------CcCcEEEEEC-CCcccceecCCccHHHHHHHHHHHH
Confidence 2223767775 5666666777777788888777654
No 234
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.52 E-value=1e-07 Score=59.76 Aligned_cols=39 Identities=8% Similarity=0.105 Sum_probs=31.0
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
...+.|+.|+++||++|....+.|.++. .++.+..|+++
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~ 52 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDIT 52 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETT
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECC
Confidence 3567889999999999999888877543 23888888875
No 235
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.50 E-value=6.3e-07 Score=71.86 Aligned_cols=42 Identities=10% Similarity=0.003 Sum_probs=37.3
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.++..++.||++||++|+...|.++++..++. ++.+..|+.+
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~ 157 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGG 157 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETT
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEech
Confidence 46788999999999999999999999998875 4999999875
No 236
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.47 E-value=1.9e-07 Score=65.09 Aligned_cols=42 Identities=12% Similarity=0.152 Sum_probs=36.8
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeec
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~ 73 (170)
.++++|+.||..+||+|....+.+.++.+++.+ .+.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 578899999999999999999999999999865 477777765
No 237
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.44 E-value=1.4e-07 Score=68.37 Aligned_cols=47 Identities=9% Similarity=0.089 Sum_probs=36.4
Q ss_pred ecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 25 VDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 25 ~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
+.+..-.++.+|+.|+..|||+|+...+.+.++.+. .++.+..+.+.
T Consensus 90 i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~~p 136 (241)
T 1v58_A 90 LLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS---GKVQLRTLLVG 136 (241)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT---TSEEEEEEECC
T ss_pred ceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC---CcEEEEEEECC
Confidence 334444678999999999999999999999987775 24777766653
No 238
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.39 E-value=2.6e-07 Score=64.72 Aligned_cols=43 Identities=19% Similarity=0.109 Sum_probs=38.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.++++|+.|+..|||+|....+.+.++.+++.+ .+.+.-+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 479999999999999999999999999999887 4888888775
No 239
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.38 E-value=2.3e-06 Score=62.20 Aligned_cols=40 Identities=5% Similarity=-0.066 Sum_probs=35.0
Q ss_pred CCcEEEEEEe--cCCCCCChhhHHHHHHHHHHhcc--CCcEEEEeecC
Q 030881 31 KGKVLLIVNV--ASKCGMTNSNYIELSQLYDKYKD--QGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~--~~~C~~C~~~~~~l~~~~~~~~~--~~v~~v~is~d 74 (170)
.++++||.|| |+||+ ..|.+.++.+++.+ ..+.|..|+++
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d 75 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVK 75 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEEC
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECC
Confidence 4689999999 99998 89999999999964 35999999986
No 240
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.34 E-value=1.3e-06 Score=63.20 Aligned_cols=40 Identities=15% Similarity=0.107 Sum_probs=34.7
Q ss_pred CCcEEEEEEec--CCCCCChhhHHHHHHHHHHhcc-CCcEEEEeecC
Q 030881 31 KGKVLLIVNVA--SKCGMTNSNYIELSQLYDKYKD-QGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~--~~C~~C~~~~~~l~~~~~~~~~-~~v~~v~is~d 74 (170)
.++++||.||+ +||+ ..|.+.++.+.+.+ .++.|..|++|
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd 63 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGIS 63 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCC
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCC
Confidence 46899999999 9998 88999999999974 35999999875
No 241
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.30 E-value=7.4e-06 Score=56.06 Aligned_cols=50 Identities=12% Similarity=0.172 Sum_probs=41.0
Q ss_pred ecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccC-CcEEEEeecC
Q 030881 25 VDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ-GLEILAFPCN 74 (170)
Q Consensus 25 ~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~v~~v~is~d 74 (170)
+.+....++++|+.|+..+||+|....+.+.++.+++.+. .+.++...+.
T Consensus 20 ~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (175)
T 1z6m_A 20 LHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 70 (175)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred cccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence 4566667899999999999999999999999999888322 3888877764
No 242
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.25 E-value=1.3e-06 Score=62.09 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=31.8
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeec
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~ 73 (170)
.++++|+.||..|||+|+...+.+.++.+. ++.+..+.+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~ 123 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAF 123 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEEC
Confidence 468999999999999999999999886542 477766554
No 243
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.22 E-value=4.5e-07 Score=54.58 Aligned_cols=38 Identities=8% Similarity=-0.017 Sum_probs=32.4
Q ss_pred EEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 35 LLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 35 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.|+.|+++|||+|....+.|.++..+++ ++.+..++++
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~--~i~~~~vdi~ 39 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERD--DFQYQYVDIR 39 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHS--SCEEEEECHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCC--CceEEEEecc
Confidence 3678999999999999999999988864 4888888764
No 244
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.21 E-value=7e-06 Score=62.53 Aligned_cols=93 Identities=6% Similarity=0.079 Sum_probs=63.0
Q ss_pred cEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCCCc
Q 030881 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHA 112 (170)
Q Consensus 33 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~ 112 (170)
+.+++.|++.||++|....+.+.+++++++++ +.++.|+.+. .+....++ .+++.-
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~---------~~~~~~~~-~fgi~~------------- 191 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDH---------TDNQRILE-FFGLKK------------- 191 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTS---------GGGHHHHH-HTTCCT-------------
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCCh---------HHHHHHHH-HcCCCc-------------
Confidence 57889999999999999999999999999876 8999987641 11223332 444320
Q ss_pred hhHHHHhHhccCCccCCccccCceeEEECCCCc-EEEEe-CCCCCchHHHHHHHHHhc
Q 030881 113 SPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQ-VVDRY-YPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~-i~~~~-~~~~~~~~l~~~l~~~l~ 168 (170)
..+| ++.+++.++. ..+.. .+..+.+.+.+.++..++
T Consensus 192 ----------------~~~P---~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~ 230 (361)
T 3uem_A 192 ----------------EECP---AVRLITLEEEMTKYKPESEELTAERITEFCHRFLE 230 (361)
T ss_dssp ----------------TTCS---EEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHT
T ss_pred ----------------cCCc---cEEEEEcCCcccccCCCccccCHHHHHHHHHHHhc
Confidence 1122 6667765333 23322 256788889999988775
No 245
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=98.20 E-value=2.2e-06 Score=59.86 Aligned_cols=130 Identities=10% Similarity=0.004 Sum_probs=80.5
Q ss_pred ccCCccccc--cee--eC-----CC----C--CeecCCCC--CCcEEEEEEe-cCCCCCChh-hHHHHHHHHHHh-ccCC
Q 030881 6 IQNPESIFD--LSV--KD-----AR----G--HEVDLSTY--KGKVLLIVNV-ASKCGMTNS-NYIELSQLYDKY-KDQG 65 (170)
Q Consensus 6 ~~~g~~~p~--f~l--~~-----~~----g--~~~~l~~~--~gk~~lv~f~-~~~C~~C~~-~~~~l~~~~~~~-~~~~ 65 (170)
..+|+++|. +++ .. .+ | .++++++. +||.|||++. +.+.|.|.. .+|.+.+.++++ +.+|
T Consensus 26 ~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~kG 105 (199)
T 4h86_A 26 DLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKE 105 (199)
T ss_dssp TTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHSC
T ss_pred HHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhcC
Confidence 458889995 332 21 11 3 24677774 7887777766 789999986 599999888875 6778
Q ss_pred c-EEEEeecCCCCCCCCCChHHHHHHHHhhcCC----CCCceEEeecCCCCchhHHHHhHhccCCccCCccccCceeEEE
Q 030881 66 L-EILAFPCNQFGEEEPGSNDQIADFVCTRFKS----EFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLV 140 (170)
Q Consensus 66 v-~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~----~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~li 140 (170)
+ +++.|++| ++-.+..|.+ ..+. .++++ .|.++..... ++..... .. .+....-..+||
T Consensus 106 vd~I~ciSVN--------D~FVm~AW~k-~~~~~~~~~i~~l--aD~~~eftka-lGl~~~~---~~-gg~RS~Rya~IV 169 (199)
T 4h86_A 106 VDQVIVVTVD--------NPFANQAWAK-SLGVKDTTHIKFA--SDPGCAFTKS-IGFELAV---GD-GVYWSGRWAMVV 169 (199)
T ss_dssp CCEEEEEESS--------CHHHHHHHHH-HTTCCCCSSEEEE--ECGGGHHHHH-TTCEEEE---ET-TEEEECSEEEEE
T ss_pred CcEEEEEEcC--------CHHHHHHHHH-Hhccccccccccc--CCcchHHHHh-cCceeec---CC-CcceeeEEEEEE
Confidence 7 78888987 6778888876 4343 35555 5544432221 1111110 01 122223255788
Q ss_pred CCCCcEEEEeCC
Q 030881 141 DKNGQVVDRYYP 152 (170)
Q Consensus 141 d~~G~i~~~~~~ 152 (170)
| ||+|.+.+..
T Consensus 170 d-DGvV~~~~vE 180 (199)
T 4h86_A 170 E-NGIVTYAAKE 180 (199)
T ss_dssp E-TTEEEEEEEC
T ss_pred E-CCEEEEEEEe
Confidence 7 8999998653
No 246
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.00 E-value=7.7e-05 Score=45.80 Aligned_cols=32 Identities=16% Similarity=0.160 Sum_probs=24.4
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
|+.|..+|||+|...-..|.+ +|+.+..++++
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~-------~gi~y~~idi~ 37 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA-------NRIAYDEVDIE 37 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH-------TTCCCEEEETT
T ss_pred EEEEcCCCCHhHHHHHHHHHh-------cCCceEEEEcC
Confidence 566788999999987765543 56778888776
No 247
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.99 E-value=1.6e-06 Score=64.45 Aligned_cols=37 Identities=14% Similarity=0.062 Sum_probs=29.1
Q ss_pred ecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHh
Q 030881 25 VDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKY 61 (170)
Q Consensus 25 ~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~ 61 (170)
..+++.-++..++.||++||++|+...|.+.++.+++
T Consensus 190 ~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 190 VGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 4455544455689999999999999999999987654
No 248
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.94 E-value=1e-06 Score=61.96 Aligned_cols=53 Identities=15% Similarity=0.211 Sum_probs=42.6
Q ss_pred CCCee-cCCC-CCCcEEEEEEecCCCCCChhhHHHH---HHHHHHhccCCcEEEEeecC
Q 030881 21 RGHEV-DLST-YKGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 21 ~g~~~-~l~~-~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~~v~is~d 74 (170)
.|+.+ .+.. ..++++||.||+.|||+|....|.+ .++.+++++ ++.+..++++
T Consensus 100 ~g~~y~~l~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~ 157 (197)
T 1un2_A 100 DGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVN 157 (197)
T ss_dssp BTTTEEECSSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECS
T ss_pred CCCCceEccCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccC
Confidence 45432 3443 3578999999999999999999998 999999875 4899999886
No 249
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.91 E-value=3.6e-05 Score=55.66 Aligned_cols=43 Identities=12% Similarity=0.152 Sum_probs=35.1
Q ss_pred CcEEEEEEecCC--CCCChhhHHHHHHHHHHhcc-CC---cEEEEeecC
Q 030881 32 GKVLLIVNVASK--CGMTNSNYIELSQLYDKYKD-QG---LEILAFPCN 74 (170)
Q Consensus 32 gk~~lv~f~~~~--C~~C~~~~~~l~~~~~~~~~-~~---v~~v~is~d 74 (170)
+++++|.||+.| |++|....+.+.++.+.+.. +| +.|+.++.+
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d 73 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRE 73 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETT
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCC
Confidence 478999999999 99999999999999988532 22 778888765
No 250
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.88 E-value=4.6e-06 Score=49.66 Aligned_cols=36 Identities=8% Similarity=0.015 Sum_probs=27.5
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
++.||++||++|....+.+.++.+++ ++.+..+.++
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~ 39 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS---KYTVEIVHLG 39 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT---TEEEEEEETT
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc---CCeEEEEEec
Confidence 67789999999999999999887664 3445555544
No 251
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.79 E-value=0.00029 Score=48.55 Aligned_cols=110 Identities=12% Similarity=0.104 Sum_probs=64.2
Q ss_pred CCCCcEEEEEEecCCCCCChhhHHHH---HHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEe
Q 030881 29 TYKGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKI 105 (170)
Q Consensus 29 ~~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 105 (170)
.-.+|+++|++.++||..|......+ .++.+-+++ ++.+.+.+++ +.+....+.. ..+..+
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~--------~~e~~~~~~~-~~~~~~------ 115 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLT--------KDSNRARFLT-MCNRHF------ 115 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECC--------SHHHHHHHHH-HHHHHT------
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCC--------Cchhhhhhhh-hhhhhh------
Confidence 44689999999999999988766443 223333332 4888888774 3333222221 100000
Q ss_pred ecCCCCchh-HHHHhHhccCCccCCccccCceeEEECCCC---cEEEEeCCCCCchHHHHHHHHHhc
Q 030881 106 DVNGEHASP-LYKLLKSGKWGIFGDDIQWNFAKFLVDKNG---QVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 106 d~~~~~~~~-~~~~~~~~~~~~~~~~i~~~p~~~lid~~G---~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+..... +..+ .+...|+..+|++.| +++.+..|..+++++.+.|.+.+.
T Consensus 116 ---g~~~a~~~~~~-----------~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e 168 (178)
T 2ec4_A 116 ---GSVVAQTIRTQ-----------KTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAME 168 (178)
T ss_dssp ---CHHHHHHHHHS-----------CSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhhc-----------CCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 000000 0001 122223889998764 788999999999999988887653
No 252
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.77 E-value=3.8e-05 Score=52.62 Aligned_cols=43 Identities=9% Similarity=0.017 Sum_probs=35.8
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.++++|+.|+.-.||+|....+.+.++.+++.+. +.++-+.+.
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~-~~~~~~~~~ 62 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG-AKFQKNHVS 62 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-CEEEEEECS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc-eEEEEEecC
Confidence 5789999999999999999999999999998765 566655543
No 253
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.66 E-value=5.2e-05 Score=44.88 Aligned_cols=32 Identities=6% Similarity=0.272 Sum_probs=25.4
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
|+.|+++||++|....+.|.+ .++.+..++++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~-------~~i~~~~vdi~ 34 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN-------RGFDFEMINVD 34 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETT
T ss_pred EEEEcCCCChhHHHHHHHHHH-------CCCCeEEEECC
Confidence 577999999999998877764 35777777775
No 254
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.65 E-value=0.00025 Score=47.34 Aligned_cols=38 Identities=18% Similarity=0.339 Sum_probs=29.8
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.++.+|+.|...+||+|++..+.+.++ .+ +.++.+.+.
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~~--v~v~~~~~P 50 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----TD--VTVYSFMMP 50 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----CS--EEEEEEECC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----Cc--eEEEEEEcc
Confidence 578999999999999999999988654 33 666665543
No 255
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.57 E-value=5.4e-05 Score=52.42 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=36.7
Q ss_pred CCcEEEEEEecCCCCCChhhHHHH-HHHHHHhccCCcEEEEeecCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIEL-SQLYDKYKDQGLEILAFPCNQ 75 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l-~~~~~~~~~~~v~~v~is~d~ 75 (170)
.+++++|.||...||+|....+.+ .++.+++... +.+..+.++.
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~-v~~~~~~l~~ 60 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDI-VAFTPFHLET 60 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT-CEEEEEECTT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCc-eEEEEEecCc
Confidence 467888999999999999999999 8998888654 7777777653
No 256
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.36 E-value=3.4e-05 Score=53.65 Aligned_cols=44 Identities=5% Similarity=0.046 Sum_probs=36.7
Q ss_pred CCcEEEEEEecCCCCCChhhHHHH---HHHHHHhccCCcEEEEeecCC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCNQ 75 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~~v~is~d~ 75 (170)
.++++|+.|+..|||+|....+.+ .++.+++.+ ++.++.++++.
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~ 59 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVSL 59 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECSS
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEechh
Confidence 458999999999999999999986 577777765 48888888763
No 257
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.36 E-value=0.00018 Score=41.70 Aligned_cols=32 Identities=13% Similarity=0.192 Sum_probs=25.0
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
++.|+++||++|....+.|+++ |+.+..++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~ 34 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDIS 34 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECC
Confidence 5678999999999988877653 5777777765
No 258
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.35 E-value=9.2e-05 Score=46.11 Aligned_cols=27 Identities=26% Similarity=0.209 Sum_probs=20.9
Q ss_pred EEEEEecCCCCCChhhHHHHHHHHHHh
Q 030881 35 LLIVNVASKCGMTNSNYIELSQLYDKY 61 (170)
Q Consensus 35 ~lv~f~~~~C~~C~~~~~~l~~~~~~~ 61 (170)
.++.|+++|||+|+...+.|.++..++
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~ 39 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKE 39 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCT
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCC
Confidence 366689999999999888887654443
No 259
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=97.24 E-value=0.0046 Score=43.90 Aligned_cols=94 Identities=9% Similarity=0.080 Sum_probs=62.8
Q ss_pred cEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCCCc
Q 030881 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHA 112 (170)
Q Consensus 33 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~ 112 (170)
+..++.|...||+.|....+.+++++++++++ +.++.++.+. ......++ .+++.-
T Consensus 132 ~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~---------~~~~~~l~-~fgl~~------------- 187 (227)
T 4f9z_D 132 QIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGM---------KENGKVIS-FFKLKE------------- 187 (227)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTS---------GGGHHHHH-HTTCCG-------------
T ss_pred ceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCcc---------HhHHHHHH-HcCCCc-------------
Confidence 34455566789999999999999999999887 8899887641 11222332 444320
Q ss_pred hhHHHHhHhccCCccCCccccCceeEEECCCCcEEEEe-CCCCCchHHHHHHHHHhcC
Q 030881 113 SPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRY-YPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~~-~~~~~~~~l~~~l~~~l~~ 169 (170)
...| ++.+++..+...+.. .+..+.+.+.+.++.++++
T Consensus 188 ----------------~~~P---~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~G 226 (227)
T 4f9z_D 188 ----------------SQLP---ALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSG 226 (227)
T ss_dssp ----------------GGCS---EEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTT
T ss_pred ----------------ccCC---EEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCC
Confidence 1122 666777555444544 3567889999999998875
No 260
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.19 E-value=7.4e-05 Score=51.76 Aligned_cols=40 Identities=18% Similarity=0.146 Sum_probs=34.8
Q ss_pred CcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 32 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
++++||.|+..|||+|....|.+.++.+++ ++.+.-+.+.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA---GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH---TSCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh---CCeEEEEecc
Confidence 689999999999999999999999999998 3666666653
No 261
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.13 E-value=0.00057 Score=43.72 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=23.1
Q ss_pred EEEEecCCCCCChhh-HHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVASKCGMTNSN-YIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~~C~~C~~~-~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
|+.|+++|||+|... .+.|.++ ....+.+..++++
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~----~~~~i~~~~vdid 62 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKL----KVPRSKVLVLQLN 62 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTS----CCCGGGEEEEEGG
T ss_pred EEEEEcCCCcCHHHHHHHHHHHc----CCCCCCeEEEECc
Confidence 556999999999987 4444322 1112777777776
No 262
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.07 E-value=0.0011 Score=43.06 Aligned_cols=31 Identities=3% Similarity=0.136 Sum_probs=22.7
Q ss_pred EEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 37 IVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 37 v~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
+.|+++||++|+...+.|.++ ++.+..+.+|
T Consensus 30 vvf~~~~Cp~C~~~~~~L~~~-------~i~~~~vdid 60 (130)
T 2cq9_A 30 VIFSKTSCSYCTMAKKLFHDM-------NVNYKVVELD 60 (130)
T ss_dssp EEEECSSCSHHHHHHHHHHHH-------TCCCEEEETT
T ss_pred EEEEcCCChHHHHHHHHHHHc-------CCCcEEEECc
Confidence 338999999999988887764 3445556655
No 263
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.01 E-value=0.001 Score=41.15 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=26.5
Q ss_pred cEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 33 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
+.-|+.|+.+|||+|....+.|.++ ++.+..++++
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak~~L~~~-------~i~y~~idI~ 49 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRALALLKRK-------GVEFQEYCID 49 (99)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHH-------TCCCEEEECT
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHC-------CCCCEEEEcC
Confidence 4556678999999999999888764 4566666665
No 264
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.00 E-value=0.0065 Score=36.33 Aligned_cols=31 Identities=13% Similarity=0.226 Sum_probs=23.4
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeec
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~ 73 (170)
++.|+++||++|....+.|.+. ++.+..+++
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~-------~i~~~~vdv 38 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKK-------GVKYTDIDA 38 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHH-------TCCEEEECS
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCcEEEEC
Confidence 6678899999999988777653 356666654
No 265
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=96.98 E-value=0.0012 Score=38.86 Aligned_cols=32 Identities=16% Similarity=0.292 Sum_probs=23.7
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
++.|+++||++|....+.|.+. |+.+..++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~~i~ 34 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------GVSFQELPID 34 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCCEEEECT
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEECC
Confidence 5668899999999988777653 4556666665
No 266
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=96.95 E-value=0.00044 Score=43.88 Aligned_cols=35 Identities=9% Similarity=0.064 Sum_probs=25.2
Q ss_pred cEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcE---EEEeecC
Q 030881 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLE---ILAFPCN 74 (170)
Q Consensus 33 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~---~v~is~d 74 (170)
+..|+.|+++|||+|....+.|.+ .++. +..++++
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~-------~~~~~~~~~~vdi~ 55 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNK-------FSFKRGAYEIVDIK 55 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTT-------SCBCTTSEEEEEGG
T ss_pred cCCEEEEEeCCChhHHHHHHHHHH-------cCCCcCceEEEEcc
Confidence 345677999999999988776653 3455 6667765
No 267
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.80 E-value=0.0021 Score=40.02 Aligned_cols=33 Identities=21% Similarity=0.384 Sum_probs=23.6
Q ss_pred EEEEEEec-----CCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 34 VLLIVNVA-----SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 34 ~~lv~f~~-----~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.++| |+. +|||+|....+.|.++ ++.+..++++
T Consensus 18 ~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~ 55 (105)
T 2yan_A 18 SVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDIL 55 (105)
T ss_dssp SEEE-EESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGG
T ss_pred CEEE-EEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECC
Confidence 4555 554 9999999888877654 4666777765
No 268
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=96.77 E-value=0.0015 Score=43.46 Aligned_cols=22 Identities=5% Similarity=0.208 Sum_probs=17.9
Q ss_pred EEEEecCCCCCChhhHHHHHHH
Q 030881 36 LIVNVASKCGMTNSNYIELSQL 57 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~ 57 (170)
|+.|+++|||+|....+.|.++
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 3349999999999988887765
No 269
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.77 E-value=0.0044 Score=38.81 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=25.1
Q ss_pred cEEEEEEec----CCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 33 KVLLIVNVA----SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 33 k~~lv~f~~----~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
..++|+..+ +|||+|......|.+ .|+.+..++++
T Consensus 15 ~~vvvy~~g~~~~~~Cp~C~~ak~~L~~-------~~i~~~~vdi~ 53 (109)
T 1wik_A 15 ASVMLFMKGNKQEAKCGFSKQILEILNS-------TGVEYETFDIL 53 (109)
T ss_dssp SSEEEEESSTTTCCCSSTHHHHHHHHHH-------TCSCEEEEESS
T ss_pred CCEEEEEecCCCCCCCchHHHHHHHHHH-------cCCCeEEEECC
Confidence 345555554 899999988877754 35778888776
No 270
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=96.75 E-value=0.0044 Score=37.27 Aligned_cols=22 Identities=14% Similarity=0.123 Sum_probs=17.9
Q ss_pred EEEEecCCCCCChhhHHHHHHH
Q 030881 36 LIVNVASKCGMTNSNYIELSQL 57 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~ 57 (170)
++.|+++|||+|......|.++
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE 35 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc
Confidence 5668899999999988777664
No 271
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.75 E-value=0.0019 Score=39.00 Aligned_cols=32 Identities=16% Similarity=0.269 Sum_probs=24.0
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
++.|+.+||++|+...+.|.+ .++.+..++++
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~-------~~i~~~~~di~ 39 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLAR-------KGAEFNEIDAS 39 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEEST
T ss_pred EEEEECCCChhHHHHHHHHHH-------cCCCcEEEECC
Confidence 667889999999988776654 34666677665
No 272
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=96.73 E-value=0.001 Score=41.92 Aligned_cols=32 Identities=13% Similarity=0.282 Sum_probs=22.9
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
|+.|+.+|||+|....+.|.++ ++.+-.+.++
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~-------~i~~~~~di~ 52 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL-------GVQPLVVELD 52 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGG
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCCeEEEee
Confidence 6668999999999888777653 4444555554
No 273
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=96.59 E-value=0.00064 Score=47.24 Aligned_cols=43 Identities=9% Similarity=0.093 Sum_probs=36.9
Q ss_pred CCcEEEEEEecCCCCCChhhHHHH---HHHHHHhccCCcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIEL---SQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~v~~v~is~d 74 (170)
.++++|+.|+..+||+|....+.+ .++.+++.+. +.++.++++
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~-v~~~~~~~~ 65 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEG-TKMTKYHVE 65 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTT-CCEEEEECS
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCC-cEEEEEecc
Confidence 568999999999999999999987 6899998764 788887765
No 274
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.37 E-value=0.0045 Score=40.17 Aligned_cols=35 Identities=11% Similarity=0.196 Sum_probs=21.7
Q ss_pred EEEEecCCCCCChhh-HHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVASKCGMTNSN-YIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~~C~~C~~~-~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
|+.|+.+|||+|... .+.|.++ ....+.+..+.++
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~----~~~~i~~~~vdvd 74 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQEL----NVPKSKALVLELD 74 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTS----CCCGGGEEEEEGG
T ss_pred EEEEECCCCCchHHHHHHHHHhc----CccCCCcEEEEcc
Confidence 667889999999987 4444332 2111555555554
No 275
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.30 E-value=0.005 Score=38.93 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=22.7
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
|+.|+.+|||+|....+.|.++ |+.+-.+.+|
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~-------~i~~~~~dvd 50 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSL-------GVECNVLELD 50 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEEcCCCCcHHHHHHHHHHc-------CCCcEEEEec
Confidence 3448899999999888777653 4555556655
No 276
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=96.02 E-value=0.0017 Score=40.30 Aligned_cols=24 Identities=21% Similarity=0.140 Sum_probs=19.5
Q ss_pred EEEEEEecCCCCCChhhHHHHHHH
Q 030881 34 VLLIVNVASKCGMTNSNYIELSQL 57 (170)
Q Consensus 34 ~~lv~f~~~~C~~C~~~~~~l~~~ 57 (170)
..++.|+++|||+|....+.|.++
T Consensus 22 ~~v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 22 GKVIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc
Confidence 346668999999999998888764
No 277
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=95.83 E-value=0.0058 Score=36.26 Aligned_cols=22 Identities=5% Similarity=-0.035 Sum_probs=17.4
Q ss_pred EEEEEecCCCCCChhhHHHHHH
Q 030881 35 LLIVNVASKCGMTNSNYIELSQ 56 (170)
Q Consensus 35 ~lv~f~~~~C~~C~~~~~~l~~ 56 (170)
.++.|+.+|||+|+.....|.+
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~ 26 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEE 26 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEEEcCCChhHHHHHHHHHH
Confidence 4677889999999987766644
No 278
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=95.44 E-value=0.12 Score=38.90 Aligned_cols=96 Identities=13% Similarity=-0.021 Sum_probs=60.5
Q ss_pred cEEEEEEecCCCCCChhhHHHHHHHHHHhcc-CCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCCC
Q 030881 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKD-QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEH 111 (170)
Q Consensus 33 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 111 (170)
+..++.|...+|+.|....+.++++.+++++ ..+.++.++.+. . ....+|+++.+++.-
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~-------~-~~~~~~~~~~~gi~~------------ 305 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDD-------F-PLLVAYWEKTFKIDL------------ 305 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGG-------C-HHHHHHHHHHCCSCT------------
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchh-------h-HHHHHHHHhhcCCCc------------
Confidence 3344557788998899999999999999984 358898887642 1 222222222444320
Q ss_pred chhHHHHhHhccCCccCCccccCceeEEECCCCcEEEE--eC---CCCCchHHHHHHHHHhcC
Q 030881 112 ASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDR--YY---PTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~i~~~--~~---~~~~~~~l~~~l~~~l~~ 169 (170)
.. |++.+++....-.+. +. +..+++.+.+.++.++.+
T Consensus 306 ------------------~~---P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~G 347 (350)
T 1sji_A 306 ------------------FK---PQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSG 347 (350)
T ss_dssp ------------------TS---CEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHHTS
T ss_pred ------------------cC---CcEEEEecccccccccCCCcccccCCHHHHHHHHHHHhcC
Confidence 01 266777763222233 21 366888999999998865
No 279
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=95.25 E-value=0.064 Score=37.32 Aligned_cols=38 Identities=8% Similarity=-0.020 Sum_probs=29.9
Q ss_pred EEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeec
Q 030881 35 LLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (170)
Q Consensus 35 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~ 73 (170)
.|.+|+..-||+|-...+.|.++.+++.+ ++.+.-...
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~~-~v~v~~~p~ 41 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLPG-VIQFEYVVG 41 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSCT-TSEEEEEEC
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCCC-CceEEEEec
Confidence 56667778899999999999999999863 466665554
No 280
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=95.20 E-value=0.028 Score=39.19 Aligned_cols=53 Identities=13% Similarity=0.204 Sum_probs=39.2
Q ss_pred CCCeecCCCCCCcEEEEEEecCCCCCChhhHHHH-HHHHHHhccC-CcEEEEeecC
Q 030881 21 RGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIEL-SQLYDKYKDQ-GLEILAFPCN 74 (170)
Q Consensus 21 ~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l-~~~~~~~~~~-~v~~v~is~d 74 (170)
.|.++ +..-.++++|+.|+.-.||+|....+.+ ..+.+.|.+. .+.++...+.
T Consensus 19 ~~~~~-~G~~~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 19 KGQPV-LGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp TTSCE-ESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred CCCce-ecCCCCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 44433 4555678999999999999999988887 5666677543 4888887764
No 281
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=94.95 E-value=0.069 Score=40.64 Aligned_cols=96 Identities=13% Similarity=0.044 Sum_probs=62.2
Q ss_pred cEEEEEEecCCCCCChhhHHHHHHHHHHhccC-CcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCceEEeecCCCC
Q 030881 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQ-GLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEH 111 (170)
Q Consensus 33 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 111 (170)
+..++.|...+|+.|......++++.++++++ .+.++.++.+.+ . ...+++...+++..
T Consensus 248 ~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~-------~-~~l~~~~~~fgl~~------------ 307 (367)
T 3us3_A 248 GIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDF-------P-LLVPYWEKTFDIDL------------ 307 (367)
T ss_dssp TEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGC-------T-TTHHHHHHHHTCCT------------
T ss_pred CcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccc-------h-hHHHHHHHhcCCCC------------
Confidence 45666688888888889999999999999986 499999987632 1 11222222333320
Q ss_pred chhHHHHhHhccCCccCCccccCceeEEECCCCc--EEEEeCC---CCCchHHHHHHHHHhcC
Q 030881 112 ASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQ--VVDRYYP---TTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~i~~~p~~~lid~~G~--i~~~~~~---~~~~~~l~~~l~~~l~~ 169 (170)
.. |.+.+++.... ..+.+.+ ..+.+.+.+.++.++.+
T Consensus 308 ------------------~~---P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~G 349 (367)
T 3us3_A 308 ------------------SA---PQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEG 349 (367)
T ss_dssp ------------------TS---CEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHT
T ss_pred ------------------CC---CeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcC
Confidence 11 26677776543 2332332 57888899999988764
No 282
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=94.87 E-value=0.022 Score=37.28 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=24.3
Q ss_pred cEEEEEEec----CCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 33 KVLLIVNVA----SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 33 k~~lv~f~~----~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
..++||.++ +|||+|......|.+ .|+.+..++++
T Consensus 35 ~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~-------~gv~y~~vdI~ 73 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSAQAVQALAA-------CGERFAYVDIL 73 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHHHHHHHHHT-------TCSCCEEEEGG
T ss_pred CCEEEEEEecCCCCCCccHHHHHHHHHH-------cCCceEEEECC
Confidence 346666665 899999987766643 35667777765
No 283
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=94.87 E-value=0.069 Score=31.62 Aligned_cols=32 Identities=16% Similarity=0.063 Sum_probs=22.0
Q ss_pred EEEEecC----CCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVAS----KCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~----~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
|+.|+.+ |||+|......|++ +|+.+-.++++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~-------~gi~y~~idI~ 37 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV-------KKQPFEFINIM 37 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH-------TTCCEEEEESC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH-------cCCCEEEEEee
Confidence 4456789 99999987766554 45666666664
No 284
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=94.76 E-value=0.014 Score=42.81 Aligned_cols=40 Identities=8% Similarity=0.184 Sum_probs=31.8
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeec
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~ 73 (170)
.|+.+|+.|....||+|++..+.+.++.+. -.+.++.+.+
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~---~~Vr~i~~Pi 185 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE---NTVRMVVVGW 185 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH---CEEEEEECCC
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC---CcEEEEEeec
Confidence 478999999999999999999999976654 3366665543
No 285
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.61 E-value=0.11 Score=32.40 Aligned_cols=36 Identities=14% Similarity=0.226 Sum_probs=22.2
Q ss_pred EEEEecCCCCCChh--hHHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVASKCGMTNS--NYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~~C~~C~~--~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
|+.|..++|+.|.. ......++.++ +++.+..++++
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~L~~---~gi~y~~vdI~ 47 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRFLEA---NKIEFEEVDIT 47 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH---TTCCEEEEETT
T ss_pred EEEEEcCCCCCcccchhHHHHHHHHHH---cCCCEEEEECC
Confidence 55567899999993 12222333333 56778888775
No 286
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=94.50 E-value=0.11 Score=31.23 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=20.5
Q ss_pred EEEEecCCCCCCh--hhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVASKCGMTN--SNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~~C~~C~--~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
|+.|..++||.|. ..-....++.+ ++|+.+..++++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~---~~~i~~~~~di~ 41 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILD---GKRIQYQLVDIS 41 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHH---HTTCCCEEEETT
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHH---HCCCceEEEECC
Confidence 4556789999993 11112222222 356777777775
No 287
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=94.29 E-value=0.027 Score=36.42 Aligned_cols=58 Identities=14% Similarity=0.298 Sum_probs=32.5
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcC-CCCCce
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK-SEFPIF 102 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~-~~~p~~ 102 (170)
|+.|..+|||+|......|.+.. .+ +-.+.++-|..+ .+.+++.+++++..+ .+.|.+
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~~-~~-~v~~~~idid~~-------~d~~~~~~~l~~~~G~~tVP~I 74 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENEY-QF-IPNYYIIELDKH-------GHGEELQEYIKLVTGRGTVPNL 74 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHE-EE-ESCCEEEEGGGS-------TTHHHHHHHHHHHHSCCSSCEE
T ss_pred EEEEEcCCCccHHHHHHHHHHhc-cc-CCCcEEEEecCC-------CCHHHHHHHHHHHcCCCCcceE
Confidence 66677899999998887776631 00 112444444432 244566666653322 345554
No 288
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=93.83 E-value=0.12 Score=36.10 Aligned_cols=49 Identities=16% Similarity=-0.006 Sum_probs=37.4
Q ss_pred ecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHH-HhccC-CcEEEEeec
Q 030881 25 VDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYD-KYKDQ-GLEILAFPC 73 (170)
Q Consensus 25 ~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~-~~~~~-~v~~v~is~ 73 (170)
..+..-.++++|+.|..--||+|....+.+....+ +|.+. .+.++.-.+
T Consensus 8 ~~~G~~~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 8 HLLGNPAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred ceecCCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 33555668999999999999999999988866555 77433 388887766
No 289
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=93.74 E-value=0.063 Score=36.53 Aligned_cols=45 Identities=22% Similarity=0.251 Sum_probs=34.4
Q ss_pred CCCcEEEEEEecCCCCCChhhHHHH-HHHHHHhccC-CcEEEEeecC
Q 030881 30 YKGKVLLIVNVASKCGMTNSNYIEL-SQLYDKYKDQ-GLEILAFPCN 74 (170)
Q Consensus 30 ~~gk~~lv~f~~~~C~~C~~~~~~l-~~~~~~~~~~-~v~~v~is~d 74 (170)
-.++++|+.|+...||+|....+.+ ..+.+++.+. ++.++...+.
T Consensus 9 ~~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~p 55 (186)
T 3bci_A 9 KNGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLA 55 (186)
T ss_dssp --CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEECC
T ss_pred CCCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEecC
Confidence 3468889999999999999999998 5677788653 3777776654
No 290
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=93.50 E-value=0.096 Score=32.80 Aligned_cols=26 Identities=15% Similarity=0.387 Sum_probs=19.0
Q ss_pred CCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 42 SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 42 ~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
+|||+|......|.+ +|+.+..++++
T Consensus 29 ~~Cp~C~~ak~~L~~-------~gi~y~~~di~ 54 (111)
T 3zyw_A 29 PRCGFSKQMVEILHK-------HNIQFSSFDIF 54 (111)
T ss_dssp BSSHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred CcchhHHHHHHHHHH-------cCCCeEEEECc
Confidence 899999998876654 35666666664
No 291
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=93.19 E-value=0.1 Score=37.08 Aligned_cols=50 Identities=16% Similarity=0.133 Sum_probs=38.3
Q ss_pred ecCCCCCCcEEEEEEecCCCCCChhhHHHH-HHHHHHhccC-CcEEEEeecC
Q 030881 25 VDLSTYKGKVLLIVNVASKCGMTNSNYIEL-SQLYDKYKDQ-GLEILAFPCN 74 (170)
Q Consensus 25 ~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l-~~~~~~~~~~-~v~~v~is~d 74 (170)
..+..-.++++|+.|..-.||+|....+.+ .++.+++.+. .+.++...+.
T Consensus 32 ~~~G~~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p 83 (226)
T 3f4s_A 32 KLLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFP 83 (226)
T ss_dssp CEESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECC
T ss_pred CccCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCC
Confidence 345555678999999999999999998875 6788888543 3777777664
No 292
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=92.74 E-value=0.38 Score=30.53 Aligned_cols=25 Identities=16% Similarity=0.310 Sum_probs=17.4
Q ss_pred cEEEEEEec----CCCCCChhhHHHHHHH
Q 030881 33 KVLLIVNVA----SKCGMTNSNYIELSQL 57 (170)
Q Consensus 33 k~~lv~f~~----~~C~~C~~~~~~l~~~ 57 (170)
..++|+--. +|||+|......|++.
T Consensus 16 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~ 44 (121)
T 3gx8_A 16 APVVLFMKGTPEFPKCGFSRATIGLLGNQ 44 (121)
T ss_dssp CSEEEEESBCSSSBCTTHHHHHHHHHHHH
T ss_pred CCEEEEEeccCCCCCCccHHHHHHHHHHc
Confidence 445555554 3999999988777664
No 293
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=92.64 E-value=0.098 Score=35.81 Aligned_cols=44 Identities=14% Similarity=0.263 Sum_probs=35.1
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.++++|+.|..-.||+|....+.+..+.+++....+.++.-.+.
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~p 56 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQS 56 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEECC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEcC
Confidence 46889999999999999999999988877762223888877764
No 294
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=92.18 E-value=0.74 Score=29.32 Aligned_cols=36 Identities=14% Similarity=0.142 Sum_probs=23.6
Q ss_pred EEEEecCCCCCCh--hhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 36 LIVNVASKCGMTN--SNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 36 lv~f~~~~C~~C~--~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
|..|..+.||+|. +.-....++.+. +||.+-.++++
T Consensus 2 V~vYtt~~c~~c~~kk~c~~aK~lL~~---kgV~feEidI~ 39 (121)
T 1u6t_A 2 IRVYIASSSGSTAIKKKQQDVLGFLEA---NKIGFEEKDIA 39 (121)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHHHHHH---TTCCEEEEECT
T ss_pred EEEEecCCCCCccchHHHHHHHHHHHH---CCCceEEEECC
Confidence 4555679999995 233344444444 67888888875
No 295
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=92.02 E-value=0.31 Score=31.41 Aligned_cols=52 Identities=13% Similarity=0.135 Sum_probs=35.1
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEF 99 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (170)
+..|..++|+.|.+....|.+ +|+.+-.++++. .+.+.+++.++.+ ..+.++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~----~~~~~~el~~~l~-~~~~~~ 54 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE-------HEIPFVERNIFS----EPLSIDEIKQILR-MTEDGT 54 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEETTT----SCCCHHHHHHHHH-TCSSCG
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEccC----CCccHHHHHHHHH-HcCCCH
Confidence 445667999999988776654 456666666642 3456788888886 445543
No 296
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=91.79 E-value=0.23 Score=30.84 Aligned_cols=36 Identities=11% Similarity=0.173 Sum_probs=23.1
Q ss_pred CcEEEEEEec----CCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 32 GKVLLIVNVA----SKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 32 gk~~lv~f~~----~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
...++|+--. +|||+|......|.+ .|+.+-.++++
T Consensus 17 ~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~-------~gi~~~~~dI~ 56 (109)
T 3ipz_A 17 SEKVVLFMKGTRDFPMCGFSNTVVQILKN-------LNVPFEDVNIL 56 (109)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred cCCEEEEEecCCCCCCChhHHHHHHHHHH-------cCCCcEEEECC
Confidence 3445554444 399999998876665 34666666654
No 297
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=91.71 E-value=1.6 Score=27.67 Aligned_cols=37 Identities=14% Similarity=0.001 Sum_probs=28.8
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEee
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFP 72 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is 72 (170)
..+++||-|+.+||..| .+.+.++++.+ + .+.|...+
T Consensus 38 ~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~-d~~F~~t~ 74 (124)
T 2l4c_A 38 ATEVAVIGFFQDLEIPA---VPILHSMVQKF-P-GVSFGIST 74 (124)
T ss_dssp TSSEEEEEECSCTTSTH---HHHHHHHHHHC-T-TSEEEEEC
T ss_pred cCCCEEEEEECCCCChh---HHHHHHHHHhC-C-CceEEEEC
Confidence 35799999999999988 56778888887 3 37776653
No 298
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=91.44 E-value=0.33 Score=30.69 Aligned_cols=35 Identities=17% Similarity=0.338 Sum_probs=21.9
Q ss_pred cEEEEEEec----CCCCCChhhHHHHHHHHHHhccCCcE-EEEeecC
Q 030881 33 KVLLIVNVA----SKCGMTNSNYIELSQLYDKYKDQGLE-ILAFPCN 74 (170)
Q Consensus 33 k~~lv~f~~----~~C~~C~~~~~~l~~~~~~~~~~~v~-~v~is~d 74 (170)
..|+|+--. +|||+|......|++ .|+. +..++++
T Consensus 20 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~vdV~ 59 (118)
T 2wem_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRL-------HGVRDYAAYNVL 59 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCCEEEESS
T ss_pred CCEEEEEecCCCCCccHHHHHHHHHHHH-------cCCCCCEEEEcC
Confidence 345554444 399999988766664 3453 5566654
No 299
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=90.92 E-value=3.5 Score=30.03 Aligned_cols=38 Identities=11% Similarity=0.156 Sum_probs=29.1
Q ss_pred EEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 34 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
..|..|...+||+|...-.-|.++..+ .++..+.+..+
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~v~ 81 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQK---GDVVGLSYHVD 81 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHH---TSSEEEEEECS
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhcc---CCeeeEEEEEE
Confidence 566677789999999999999888765 34666666654
No 300
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=90.87 E-value=0.45 Score=30.15 Aligned_cols=52 Identities=10% Similarity=0.120 Sum_probs=35.7
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEF 99 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (170)
+..|..++|+.|++...-|. ++|+.+-.+++.. .+.+.+++.++.+ ..+.++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~-------~~gi~~~~~di~~----~~~~~~el~~~l~-~~~~~~ 53 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLN-------RHDVVFQEHNIMT----SPLSRDELLKILS-YTENGT 53 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHH-------HTTCCEEEEETTT----SCCCHHHHHHHHH-HCSSTH
T ss_pred EEEEeCCCCHHHHHHHHHHH-------HcCCCeEEEeccc----CCCcHHHHHHHHh-hcCCCH
Confidence 34556789999999876554 3567776776642 3568899999886 545543
No 301
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=89.99 E-value=0.18 Score=31.66 Aligned_cols=49 Identities=4% Similarity=0.041 Sum_probs=32.4
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK 96 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
|..|..++|+.|++....|.+ +|+.+-.+++.. .+.+.+++.++.+ +.+
T Consensus 2 i~iY~~~~C~~C~kak~~L~~-------~gi~~~~~di~~----~~~~~~~l~~~~~-~~g 50 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE-------HKVAYDFHDYKA----VGIDREHLRRWCA-EHG 50 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEEHHH----HCCCHHHHHHHHH-HHC
T ss_pred EEEEECCCChHHHHHHHHHHH-------CCCceEEEeecC----CCCCHHHHHHHHH-hCC
Confidence 345567999999988766654 456666665531 2346788888886 444
No 302
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=89.18 E-value=4.5 Score=28.65 Aligned_cols=33 Identities=12% Similarity=-0.045 Sum_probs=23.2
Q ss_pred eeEEECCCCcEEEEeCCCCCchH--HHHHHHHHhcC
Q 030881 136 AKFLVDKNGQVVDRYYPTTSLLS--LEHDIKKLLGL 169 (170)
Q Consensus 136 ~~~lid~~G~i~~~~~~~~~~~~--l~~~l~~~l~~ 169 (170)
.+.+++.++. .|.+.+..+.+. +.+.++.++.+
T Consensus 197 ~v~i~~~~~~-ky~~~~~~t~~~~~i~~F~~~~~~G 231 (252)
T 2h8l_A 197 VVAIRTAKGE-KFVMQEEFSRDGKALERFLQDYFDG 231 (252)
T ss_dssp EEEEECTTSC-EEECCSCCCTTSHHHHHHHHHHHHT
T ss_pred EEEEEeCcCc-EecCCcccCcchHHHHHHHHHHHCC
Confidence 6677776554 455555667777 99999888753
No 303
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=89.05 E-value=0.61 Score=29.55 Aligned_cols=53 Identities=19% Similarity=0.229 Sum_probs=36.4
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFP 100 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p 100 (170)
+..|..++|+.|++...-|. ++|+.+-.+++.. .+.+.+++.++++ ..+.++.
T Consensus 5 i~iY~~~~C~~c~ka~~~L~-------~~gi~~~~~di~~----~~~~~~eL~~~l~-~~g~~~~ 57 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELD-------DLAWDYDAIDIKK----NPPAASLIRNWLE-NSGLELK 57 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHH-------HHTCCEEEEETTT----SCCCHHHHHHHHH-HSCCCGG
T ss_pred EEEEeCCCChHHHHHHHHHH-------HcCCceEEEEecc----CchhHHHHHHHHH-HcCCCHH
Confidence 34455789999999886654 3456666666532 3568999999997 6665543
No 304
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=87.69 E-value=0.63 Score=29.48 Aligned_cols=53 Identities=6% Similarity=0.004 Sum_probs=36.2
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFP 100 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p 100 (170)
+..|..++|+.|++...-|. ++|+.+-.+++.. .+.+.+++.++++ ..+.++.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~----~~~~~~eL~~~l~-~~g~~~~ 58 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLI-------ENNIEYTNRLIVD----DNPTVEELKAWIP-LSGLPVK 58 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETTT----TCCCHHHHHHHHH-HHTSCGG
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCceEEEeccc----CcCCHHHHHHHHH-HcCCCHH
Confidence 34455789999999886554 3566666666532 3568999999997 6565543
No 305
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=87.68 E-value=0.29 Score=30.99 Aligned_cols=49 Identities=12% Similarity=0.217 Sum_probs=32.3
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK 96 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
|..|..++|+.|++....|.+ +|+.+-.+++.. .+.+.+++.++.+ +.+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~----~~~~~~~l~~~~~-~~g 55 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED-------HGIDYTFHDYKK----EGLDAETLDRFLK-TVP 55 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEEHHH----HCCCHHHHHHHHH-HSC
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCcEEEEeeeC----CCCCHHHHHHHHH-HcC
Confidence 445567999999988876655 355555555531 1246788888886 555
No 306
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=84.50 E-value=0.96 Score=29.54 Aligned_cols=49 Identities=12% Similarity=0.214 Sum_probs=33.3
Q ss_pred EEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCC
Q 030881 37 IVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS 97 (170)
Q Consensus 37 v~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~ 97 (170)
..|..++|+.|++...-|.+ +|+.+-.+++.. .+.+.+++.++.. ..+.
T Consensus 5 tiY~~p~C~~crkak~~L~~-------~gi~~~~idi~~----~~~~~~eL~~~~~-~~g~ 53 (141)
T 1s3c_A 5 TIYHNPASGTSRNTLEMIRN-------SGTEPTIILYLE----NPPSRDELVKLIA-DMGI 53 (141)
T ss_dssp EEECCTTCHHHHHHHHHHHH-------TTCCCEEECTTT----SCCCHHHHHHHHH-HHTS
T ss_pred EEEECCCChHHHHHHHHHHH-------cCCCEEEEECCC----CCccHHHHHHHhc-ccCC
Confidence 34557899999988765543 567766676642 3457888888886 4444
No 307
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=83.98 E-value=1.1 Score=28.31 Aligned_cols=50 Identities=12% Similarity=0.256 Sum_probs=35.0
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCC
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS 97 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~ 97 (170)
+..|..++|+.|++...-|. ++|+.+-.+++.. .+.+.+++.++++ ..+.
T Consensus 7 i~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~----~~~~~~eL~~~l~-~~g~ 56 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVE-------QQGITPQVVLYLE----TPPSVDKLKELLQ-QLGF 56 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHH-------TTTCCCEEECTTT----SCCCHHHHHHHHH-HTTC
T ss_pred EEEEECCCCHHHHHHHHHHH-------HcCCCcEEEeecc----CCCcHHHHHHHHH-hcCC
Confidence 34455789999998876553 4666666666542 4568999999997 5565
No 308
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=83.06 E-value=0.97 Score=31.87 Aligned_cols=35 Identities=11% Similarity=0.132 Sum_probs=23.5
Q ss_pred cEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 33 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
...++.|..+||++|.+....|.+ +|+.+-.++++
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~-------~~i~~~~~~i~ 203 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHD-------KGLSFEEIILG 203 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHH-------HTCCCEEEETT
T ss_pred cceEEEEECCCChHHHHHHHHHHH-------cCCceEEEECC
Confidence 344666778999999988766654 24555556554
No 309
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=77.94 E-value=4.6 Score=27.62 Aligned_cols=39 Identities=10% Similarity=-0.163 Sum_probs=28.9
Q ss_pred CccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 129 DDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 129 ~~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
.++...|++++. .||+.+....|..+.+.+.+.|+++++
T Consensus 172 ~gv~g~Pt~~i~-~~G~~~~~~~G~~~~~~l~~~l~~~~~ 210 (216)
T 2in3_A 172 WGISGFPALVVE-SGTDRYLITTGYRPIEALRQLLDTWLQ 210 (216)
T ss_dssp TTCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred cCCcccceEEEE-ECCEEEEeccCCCCHHHHHHHHHHHHH
Confidence 456667786654 468766567788888899999988874
No 310
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=76.28 E-value=13 Score=27.96 Aligned_cols=43 Identities=16% Similarity=0.125 Sum_probs=26.2
Q ss_pred CCcEEEEEEecCCCCC-ChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 31 KGKVLLIVNVASKCGM-TNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~-C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.++++++.|...+|.. |......+++...++++ .+.++.+..+
T Consensus 235 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~-~i~f~~id~~ 278 (382)
T 2r2j_A 235 EGLPFLILFHMKEDTESLEIFQNEVARQLISEKG-TINFLHADCD 278 (382)
T ss_dssp TCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT-TSEEEEEETT
T ss_pred CCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC-eeEEEEEchH
Confidence 3677778888777643 22333445555555554 3888888754
No 311
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=76.11 E-value=19 Score=25.87 Aligned_cols=61 Identities=15% Similarity=0.164 Sum_probs=37.4
Q ss_pred CCcccccceeeCCCCCeecCCCCC-------CcEEEEEEecCCCCCChhh-HHHHHHHHH---Hhc-----cCCcEEEEe
Q 030881 8 NPESIFDLSVKDARGHEVDLSTYK-------GKVLLIVNVASKCGMTNSN-YIELSQLYD---KYK-----DQGLEILAF 71 (170)
Q Consensus 8 ~g~~~p~f~l~~~~g~~~~l~~~~-------gk~~lv~f~~~~C~~C~~~-~~~l~~~~~---~~~-----~~~v~~v~i 71 (170)
.-..+|-|.+.|.+|.++-...-. ++-+...|. |... ...+.++.. ... ..+++|+.|
T Consensus 10 kL~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~------s~~dA~~~L~~lk~~~~~np~~~~~~~~~kV~~v 83 (252)
T 4ev1_A 10 KLDSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM------SRQEAQAFINELRNAKNKDPKMQEIVKSLQVTAV 83 (252)
T ss_dssp HHTTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES------CHHHHHHHHHHHHHCSSCCHHHHHHHTTCEEEEE
T ss_pred HhcCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe------cHHHHHHHHHHHHhccccCchhhhhccCceEEEe
Confidence 346789999999999987544332 344544444 3443 344455555 211 235899999
Q ss_pred ecC
Q 030881 72 PCN 74 (170)
Q Consensus 72 s~d 74 (170)
+++
T Consensus 84 sL~ 86 (252)
T 4ev1_A 84 PLG 86 (252)
T ss_dssp EHH
T ss_pred eHH
Confidence 874
No 312
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=75.11 E-value=3.4 Score=27.92 Aligned_cols=37 Identities=19% Similarity=0.019 Sum_probs=26.0
Q ss_pred ccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 130 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 130 ~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+|...|+++ | ||+.+-...|..+.+.+.+.|+.++++
T Consensus 149 gv~GtPtfv-v--ng~~~v~~~Ga~~~e~~~~~i~~ll~k 185 (185)
T 3feu_A 149 GISSVPTFV-V--NGKYNVLIGGHDDPKQIADTIRYLLEK 185 (185)
T ss_dssp TCCSSSEEE-E--TTTEEECGGGCSSHHHHHHHHHHHHTC
T ss_pred CCCccCEEE-E--CCEEEEecCCCCCHHHHHHHHHHHHhC
Confidence 455555854 5 577655456777888999999998863
No 313
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=74.75 E-value=0.36 Score=22.32 Aligned_cols=21 Identities=10% Similarity=0.085 Sum_probs=16.9
Q ss_pred CCCCChhhHHHHHHHHHHhcc
Q 030881 43 KCGMTNSNYIELSQLYDKYKD 63 (170)
Q Consensus 43 ~C~~C~~~~~~l~~~~~~~~~ 63 (170)
-|+.|+.++|.+..+..-|.+
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHHH
Confidence 499999999988887776643
No 314
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=74.43 E-value=1.2 Score=33.89 Aligned_cols=17 Identities=12% Similarity=0.301 Sum_probs=11.2
Q ss_pred EEEEecCCCCCChhhHH
Q 030881 36 LIVNVASKCGMTNSNYI 52 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~ 52 (170)
|+.|..+|||+|.....
T Consensus 263 VvVYsk~~CPyC~~Ak~ 279 (362)
T 2jad_A 263 IFVASKTYCPYSHAALN 279 (362)
T ss_dssp EEEEECTTCHHHHHHHH
T ss_pred EEEEEcCCCcchHHHHH
Confidence 44455688888887653
No 315
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=73.85 E-value=1.1 Score=28.23 Aligned_cols=50 Identities=12% Similarity=0.214 Sum_probs=33.1
Q ss_pred EEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCC
Q 030881 37 IVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSE 98 (170)
Q Consensus 37 v~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~ 98 (170)
..|..++|+.|++...-|.+ +|+.+-.+++.. .+.+.+++..+++ ..+..
T Consensus 7 ~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~----~~~t~~eL~~~l~-~~g~~ 56 (119)
T 3f0i_A 7 VIYHNPKCSKSRETLALLEN-------QGIAPQVIKYLE----TSPSVEELKRLYQ-QLGLN 56 (119)
T ss_dssp EEECCTTCHHHHHHHHHHHH-------TTCCCEEECHHH----HCCCHHHHHHHHH-HHTCS
T ss_pred EEEECCCChHHHHHHHHHHH-------cCCceEEEEecc----CcCcHHHHHHHHH-HcCCc
Confidence 34557899999998866653 455555554421 2458899999997 55654
No 316
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=72.65 E-value=1.5 Score=30.97 Aligned_cols=38 Identities=18% Similarity=0.045 Sum_probs=25.2
Q ss_pred cccCceeEEECCCCcEEE-----EeCCCCCchHHHHHHHHHhc
Q 030881 131 IQWNFAKFLVDKNGQVVD-----RYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 131 i~~~p~~~lid~~G~i~~-----~~~~~~~~~~l~~~l~~~l~ 168 (170)
|...|+++|.+.||+.+. ...|..+.+.+.+.|+++++
T Consensus 169 V~GtPtfvv~~~nG~~~~Ga~~~~~~G~~~~e~l~~~I~~~l~ 211 (226)
T 3f4s_A 169 ITAVPIFFIKLNDDKSYIEHNKVKHGGYKELKYFTNVIDKLYG 211 (226)
T ss_dssp CCSSCEEEEEECCTTCCCCGGGGEEESCCCHHHHHHHHHHHHH
T ss_pred CCcCCEEEEEcCCCEEeeCCCCcccccccCHHHHHHHHHHHHh
Confidence 455569888777888532 11233348889999988875
No 317
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=72.29 E-value=4.5 Score=27.69 Aligned_cols=39 Identities=10% Similarity=0.017 Sum_probs=27.3
Q ss_pred EEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeec
Q 030881 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPC 73 (170)
Q Consensus 34 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~ 73 (170)
..|.+|+..-||+|-...+.+.++.+ +.+.++.+.-..+
T Consensus 8 ~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~~ 46 (216)
T 2in3_A 8 PVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMPG 46 (216)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEEC
T ss_pred eeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEeec
Confidence 45666777889999987788888777 4333466665544
No 318
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=71.52 E-value=22 Score=24.98 Aligned_cols=33 Identities=9% Similarity=-0.043 Sum_probs=22.8
Q ss_pred eeEEECCCCcEEEEeC-CCCCchHHHHHHHHHhcC
Q 030881 136 AKFLVDKNGQVVDRYY-PTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 136 ~~~lid~~G~i~~~~~-~~~~~~~l~~~l~~~l~~ 169 (170)
..++++.+++ .|... +..+.+.+.+.++.++++
T Consensus 196 ~~~~~~~~~~-ky~~~~~~~t~~~i~~Fv~~~~~G 229 (250)
T 3ec3_A 196 NAAILDESGK-KFAMEPEEFDSDALREFVMAFKKG 229 (250)
T ss_dssp EEEEECTTSC-EEECCCCSCCHHHHHHHHHHHHTT
T ss_pred EEEEEcCCCc-eecCCcccCCHHHHHHHHHHHHCC
Confidence 5567775554 44443 457888999999998864
No 319
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=71.51 E-value=18 Score=23.38 Aligned_cols=25 Identities=4% Similarity=0.159 Sum_probs=19.6
Q ss_pred hhhHHHHHHHHHHhccCCcEEEEeec
Q 030881 48 NSNYIELSQLYDKYKDQGLEILAFPC 73 (170)
Q Consensus 48 ~~~~~~l~~~~~~~~~~~v~~v~is~ 73 (170)
....+.+++++.+++++ +.++.++.
T Consensus 48 ~~~~~~~~~vAk~fkgk-i~Fv~vd~ 72 (147)
T 3bj5_A 48 DGKLSNFKTAAESFKGK-ILFAFIDS 72 (147)
T ss_dssp HHHHHHHHHHHHTTTTT-CEEEEECT
T ss_pred HHHHHHHHHHHHHcCCc-eEEEEEec
Confidence 34578889999999875 88888865
No 320
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=68.80 E-value=26 Score=24.30 Aligned_cols=36 Identities=17% Similarity=0.042 Sum_probs=25.9
Q ss_pred cccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHH
Q 030881 131 IQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 166 (170)
Q Consensus 131 i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~ 166 (170)
|...|+.++++++|++..........+.+...|+++
T Consensus 203 v~~~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 203 VTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp CCCSSEEEEEETTSCEEECCCSSSSHHHHHHHHHTC
T ss_pred CCCCCeEEEEeCCCCeEeeccccccHHHHHHHHHhC
Confidence 444459999999999999866555555566666655
No 321
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=66.97 E-value=14 Score=20.48 Aligned_cols=32 Identities=19% Similarity=0.073 Sum_probs=26.1
Q ss_pred eeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 136 AKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 136 ~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
++.|...||+|+....+..+..+..+.|+.+-
T Consensus 14 rfrLka~NGevI~sSe~Y~sk~~a~~gI~sVk 45 (64)
T 3bid_A 14 RWRLKAANHEIIAQGEGYTSKQNCQHAVDLLK 45 (64)
T ss_dssp EEEEECTTSCEEEECCCBSCHHHHHHHHHHHH
T ss_pred EEEEEeCCCCEEEECCCcCCHHHHHHHHHHHH
Confidence 77899999999998777777777777777654
No 322
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=62.89 E-value=6.9 Score=31.49 Aligned_cols=22 Identities=14% Similarity=0.160 Sum_probs=16.6
Q ss_pred EEEEEecCCCCCChhhHHHHHH
Q 030881 35 LLIVNVASKCGMTNSNYIELSQ 56 (170)
Q Consensus 35 ~lv~f~~~~C~~C~~~~~~l~~ 56 (170)
-|+.|..+|||+|......|.+
T Consensus 19 ~v~vy~~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 19 AVILFSKTTCPYCKKVKDVLAE 40 (598)
T ss_dssp SEEEEECTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHHH
Confidence 3566778999999977666654
No 323
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=62.68 E-value=9.9 Score=23.86 Aligned_cols=22 Identities=18% Similarity=0.388 Sum_probs=12.1
Q ss_pred cEEEEEEec----CCCCCChhhHHHH
Q 030881 33 KVLLIVNVA----SKCGMTNSNYIEL 54 (170)
Q Consensus 33 k~~lv~f~~----~~C~~C~~~~~~l 54 (170)
..|||+-=+ +.||+|.+....|
T Consensus 20 ~~VvvF~Kgt~~~P~C~fc~~ak~lL 45 (118)
T 2wul_A 20 DKVVVFLKGTPEQPQCGFSNAVVQIL 45 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCCHHHHHHHHHH
Confidence 345554433 3577777665444
No 324
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=62.60 E-value=9.8 Score=26.19 Aligned_cols=34 Identities=18% Similarity=0.136 Sum_probs=24.5
Q ss_pred ccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 130 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 130 ~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+|...|+++ | ||+. ..|..+.+.+.+.|++++++
T Consensus 165 GV~GtPtfv-v--ng~~---~~G~~~~e~l~~~i~~~~~~ 198 (205)
T 3gmf_A 165 NVSGTPSFM-I--DGIL---LAGTHDWASLRPQILARLNE 198 (205)
T ss_dssp CCCSSSEEE-E--TTEE---CTTCCSHHHHHHHHHHHHTC
T ss_pred CCccCCEEE-E--CCEE---EeCCCCHHHHHHHHHHHhhc
Confidence 455556855 4 5663 46778899999999988864
No 325
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=62.06 E-value=15 Score=25.89 Aligned_cols=42 Identities=10% Similarity=0.206 Sum_probs=29.5
Q ss_pred CcEEEEEEecCCCCCChhhHHHHHHHHHHhcc-CCcEEEEeec
Q 030881 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKD-QGLEILAFPC 73 (170)
Q Consensus 32 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~v~~v~is~ 73 (170)
||..|-+|+..-||+|-...+.|.++.+.+.+ .++.+.-..+
T Consensus 1 ~~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~P~ 43 (239)
T 3gl5_A 1 GHMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRSF 43 (239)
T ss_dssp -CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEEEC
T ss_pred CCeEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEEEe
Confidence 44454444456799999999999999988764 3566655554
No 326
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=61.75 E-value=0.74 Score=29.02 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=27.9
Q ss_pred cEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 33 KVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 33 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
|.+++-|.-+.|+.|......+.++.++ ..++-|++=
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~lede-----Y~ilrVNIl 38 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKSE-----YDILHVDIL 38 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTTT-----EEEEEEECC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhcc-----ccEEEEEee
Confidence 5788999999999999888777655555 456666553
No 327
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=61.65 E-value=7.7 Score=26.56 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=23.6
Q ss_pred ccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 130 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 130 ~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+|...|+++| ||+. ..|..+.+.+.+.|+++++
T Consensus 160 gV~gtPtfvv---nG~~---~~G~~~~e~l~~~i~~~~~ 192 (202)
T 3gha_A 160 NIQATPTIYV---NDKV---IKNFADYDEIKETIEKELK 192 (202)
T ss_dssp TCCSSCEEEE---TTEE---CSCTTCHHHHHHHHHHHHH
T ss_pred CCCcCCEEEE---CCEE---ecCCCCHHHHHHHHHHHHH
Confidence 4555668554 5764 4567788999999988875
No 328
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=61.40 E-value=1 Score=21.80 Aligned_cols=19 Identities=16% Similarity=0.406 Sum_probs=13.6
Q ss_pred CCCChhhHHHHHHHHHHhc
Q 030881 44 CGMTNSNYIELSQLYDKYK 62 (170)
Q Consensus 44 C~~C~~~~~~l~~~~~~~~ 62 (170)
||.|++.+....+|..-|.
T Consensus 8 CP~C~~~l~s~~~L~~Hye 26 (34)
T 3mjh_B 8 CPQCMKSLGSADELFKHYE 26 (34)
T ss_dssp CTTTCCEESSHHHHHHHHH
T ss_pred CcHHHHHcCCHHHHHHHHH
Confidence 9999988766666665554
No 329
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=60.48 E-value=38 Score=23.25 Aligned_cols=36 Identities=14% Similarity=0.034 Sum_probs=28.6
Q ss_pred CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEe
Q 030881 31 KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAF 71 (170)
Q Consensus 31 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~i 71 (170)
.++++||-|+++|| ....+.+.++++.++ .+.+...
T Consensus 26 ~~~v~vVgff~~~~---~~~~~~f~~~A~~l~--~~~F~~t 61 (227)
T 4f9z_D 26 ATEVAVIGFFQDLE---IPAVPILHSMVQKFP--GVSFGIS 61 (227)
T ss_dssp TSSEEEEEECSCSC---STHHHHHHHHTTTCT--TSEEEEE
T ss_pred cCCeEEEEEecCCC---chhHHHHHHHHHhCC--CceEEEE
Confidence 45899999999885 678889999999884 4777654
No 330
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=59.40 E-value=8.9 Score=25.53 Aligned_cols=33 Identities=21% Similarity=0.198 Sum_probs=21.0
Q ss_pred ccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhc
Q 030881 130 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 130 ~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~ 168 (170)
+|...|++++ ||+. ..|..+.+.+.+.|+++++
T Consensus 146 gv~GtPt~vv---nG~~---~~G~~~~~~l~~~i~~~~~ 178 (186)
T 3bci_A 146 HIKTTPTAFI---NGEK---VEDPYDYESYEKLLKDKIK 178 (186)
T ss_dssp TCCSSSEEEE---TTEE---CSCTTCHHHHHHHHHC---
T ss_pred CCCCCCeEEE---CCEE---cCCCCCHHHHHHHHHHHHH
Confidence 4555668555 6764 3466788889999988764
No 331
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=57.73 E-value=18 Score=22.67 Aligned_cols=56 Identities=14% Similarity=0.214 Sum_probs=36.9
Q ss_pred CCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCCce
Q 030881 30 YKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIF 102 (170)
Q Consensus 30 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 102 (170)
|+|.++||++-.-- . . ..+..+.+.+...|+.+++|.-. +.+.+.+.+. . ..+|++
T Consensus 45 F~~aPVVlDl~~l~-~--~---~dl~~L~~~l~~~gl~~vGV~g~--------~~~~~~~~a~-~--~GLp~l 100 (120)
T 3ghf_A 45 LKHAPVVINVSGLE-S--P---VNWPELHKIVTSTGLRIIGVSGC--------KDASLKVEID-R--MGLPLL 100 (120)
T ss_dssp HTTCEEEEEEEECC-S--S---CCHHHHHHHHHTTTCEEEEEESC--------CCHHHHHHHH-H--HTCCEE
T ss_pred hCCCcEEEEccccC-C--h---HHHHHHHHHHHHcCCEEEEEeCC--------CcHHHHHHHH-H--CCCCcc
Confidence 48999999997542 1 1 24667777777789999999753 3344555554 3 345555
No 332
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=55.99 E-value=22 Score=20.26 Aligned_cols=40 Identities=13% Similarity=0.216 Sum_probs=27.7
Q ss_pred CCC-CeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHH
Q 030881 20 ARG-HEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDK 60 (170)
Q Consensus 20 ~~g-~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~ 60 (170)
.+| -.+.+-++.+..+.|.+-+. |..|......+++...+
T Consensus 22 ~dGGGdvelv~v~~g~V~v~l~Ga-C~gc~Tlk~gIe~~L~~ 62 (74)
T 1th5_A 22 GTGGGGLQFLMIKGPIVKVRLTGP-AAVVRTVRIAVSKKLRE 62 (74)
T ss_dssp TTTCCCCCCCEEETTEEEECCCSS-SSSSSSHHHHHHHHHHH
T ss_pred hcCCCcEEEEEEeCCEEEEEEecC-CcchHHHHHHHHHHHHH
Confidence 355 66777777777777777765 88897666667654443
No 333
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=55.92 E-value=7.4 Score=17.05 Aligned_cols=15 Identities=13% Similarity=0.297 Sum_probs=12.9
Q ss_pred eeEEECCCCcEEEEe
Q 030881 136 AKFLVDKNGQVVDRY 150 (170)
Q Consensus 136 ~~~lid~~G~i~~~~ 150 (170)
++.|.|+||+++...
T Consensus 6 ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 6 SSKIYDNKNQLIADL 20 (26)
T ss_pred CCEEEeCCCCEeeec
Confidence 568999999999875
No 334
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=55.88 E-value=13 Score=24.08 Aligned_cols=35 Identities=11% Similarity=0.072 Sum_probs=23.8
Q ss_pred ccCceeEEECCCCcEEEE----eCCCCCchHHHHHHHHHh
Q 030881 132 QWNFAKFLVDKNGQVVDR----YYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 132 ~~~p~~~lid~~G~i~~~----~~~~~~~~~l~~~l~~~l 167 (170)
|..|++-|+ ++|++++. +....+++.+.+.|..+.
T Consensus 105 PSSPS~ALf-KdGelVh~ieRh~IEGr~a~~Ia~~L~~af 143 (147)
T 3fhk_A 105 PSSPSMALL-KGKEVVHFIPRHEIEGHDMEEIMKNLTAAF 143 (147)
T ss_dssp CCSSEEEEE-ETTEEEEEECGGGTTTSCHHHHHHHHHHHH
T ss_pred CCCchheee-eCCEEEEEeehhhcCCCCHHHHHHHHHHHH
Confidence 334564444 79999998 344467778888887765
No 335
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=49.67 E-value=42 Score=27.31 Aligned_cols=51 Identities=16% Similarity=0.086 Sum_probs=35.9
Q ss_pred ccCCcccccceeeC-CCCCeecCCC-C--CCcEEEEEEecCCCCCCh-hhHHHHHH
Q 030881 6 IQNPESIFDLSVKD-ARGHEVDLST-Y--KGKVLLIVNVASKCGMTN-SNYIELSQ 56 (170)
Q Consensus 6 ~~~g~~~p~f~l~~-~~g~~~~l~~-~--~gk~~lv~f~~~~C~~C~-~~~~~l~~ 56 (170)
+.+|..+|++.+.. .+|+++++.+ + .|+++|+.|-..-.+.+. ..+..+.+
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~~~~~~~~~~~~~~~~~~~ 522 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAFAAQNDLAQPESGLLALCR 522 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEECCTTTTTCTTSHHHHHHH
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEecCCCCchhhHHHHHHHHH
Confidence 45899999999976 4888888888 4 379999999765444444 34444443
No 336
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=49.52 E-value=9.1 Score=25.99 Aligned_cols=27 Identities=15% Similarity=0.053 Sum_probs=22.9
Q ss_pred EEEEecCCCCCChhhHHHHHHHHHHhc
Q 030881 36 LIVNVASKCGMTNSNYIELSQLYDKYK 62 (170)
Q Consensus 36 lv~f~~~~C~~C~~~~~~l~~~~~~~~ 62 (170)
|.+|+..-||+|-...+.|.++.+++.
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~~ 29 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDYG 29 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcC
Confidence 455666789999999999999999984
No 337
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=47.16 E-value=23 Score=24.88 Aligned_cols=35 Identities=3% Similarity=-0.140 Sum_probs=23.0
Q ss_pred ccccCceeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 130 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 130 ~i~~~p~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
+|...|++ +| ||+ +...|..+.+.+.+.|++++++
T Consensus 180 Gv~GvPtf-vv--~g~--~~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 180 GATGVPFF-VL--DRA--YGVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp TCCSSSEE-EE--TTT--EEEESSCCHHHHHHHHHHHHHT
T ss_pred CCCeeCeE-EE--CCc--EeecCCCCHHHHHHHHHHHHhh
Confidence 34445584 45 455 2234677888999999988753
No 338
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=45.38 E-value=16 Score=20.86 Aligned_cols=35 Identities=9% Similarity=0.213 Sum_probs=23.2
Q ss_pred CCCCcEEEEEE-ecCCCCCChh------hHHHHHHHHHHhcc
Q 030881 29 TYKGKVLLIVN-VASKCGMTNS------NYIELSQLYDKYKD 63 (170)
Q Consensus 29 ~~~gk~~lv~f-~~~~C~~C~~------~~~~l~~~~~~~~~ 63 (170)
+++|+.++|.- -+.+|+.|-+ ....+.++...|+.
T Consensus 23 ~~~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~~ 64 (78)
T 3ga8_A 23 TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 64 (78)
T ss_dssp EETTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 45888777744 6788997754 45566666666654
No 339
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=44.96 E-value=37 Score=24.77 Aligned_cols=60 Identities=8% Similarity=0.033 Sum_probs=36.7
Q ss_pred CCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHH-HHHHHHHHhc---cCCcEEEEeecC
Q 030881 8 NPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYI-ELSQLYDKYK---DQGLEILAFPCN 74 (170)
Q Consensus 8 ~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~-~l~~~~~~~~---~~~v~~v~is~d 74 (170)
.-..+|-|.+.|.+|.++-... .++-+.+.|.. ...+. .++++..... +.+++|+.++++
T Consensus 73 KL~~VPVF~Itn~~G~Pll~~~-~~~~V~~fF~s------~~DA~a~L~el~k~~~~~~~~~~kV~pvsL~ 136 (279)
T 4e6z_A 73 KLEVIPVFLITNYNSSPYIFQE-NEKQVCYMFLC------PYDAENMLNDMIKYNGMKYNGNIKIHNITMK 136 (279)
T ss_dssp HSTTSEEEEEECTTCCBCCEEE-TTEEEEEEESS------HHHHHHHHHHHHHHCHHHHTTSCEEEEEEHH
T ss_pred HhcCCCEEEEEcCCCCEEEecC-CCCeEEEEECC------HHHHHHHHHHHHhccCcccccCceEEEecHH
Confidence 3467899999999999875443 33444444432 44433 3445544332 346899999875
No 340
>2hz5_A Dynein light chain 2A, cytoplasmic; DNLC2A, transport protein; 2.10A {Homo sapiens} SCOP: d.110.7.1 PDB: 2b95_A
Probab=42.81 E-value=8.7 Score=23.71 Aligned_cols=32 Identities=6% Similarity=0.156 Sum_probs=19.3
Q ss_pred eeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 136 AKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 136 ~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
.++|+|++|.+++..........+...+..++
T Consensus 29 G~iIln~~G~pIrSt~d~~~~~~yA~li~~L~ 60 (106)
T 2hz5_A 29 GIIVVNTEGIPIKSTMDNPTTTQYASLMHSFI 60 (106)
T ss_dssp EEEEECTTCCEEEESSCHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCeEEEecCchHHHHHHHHHHHHH
Confidence 67999999999887422222333454444443
No 341
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=42.74 E-value=33 Score=22.89 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=21.4
Q ss_pred ccccCceeEEECCCCcEEEEeCCCCCc------hHHHHHHHHHhcC
Q 030881 130 DIQWNFAKFLVDKNGQVVDRYYPTTSL------LSLEHDIKKLLGL 169 (170)
Q Consensus 130 ~i~~~p~~~lid~~G~i~~~~~~~~~~------~~l~~~l~~~l~~ 169 (170)
+|...|+++ | ||+.+-...+.... +.+.+.|+.++++
T Consensus 142 gv~GtPt~~-v--ng~~~v~~~~~~~~~~~~~~~~~~~~i~~Li~k 184 (189)
T 3l9v_A 142 GVRGTPSVY-V--RGRYHINNAAFGAFSVENFRSRYAAVVRKLLAG 184 (189)
T ss_dssp TCCSSSEEE-E--TTTEEECGGGCCCSSHHHHHHHHHHHHHHHHCC
T ss_pred CCCccCEEE-E--CCEEEECccccccccccchHHHHHHHHHHHHhC
Confidence 455556854 5 57654443332333 6788888888753
No 342
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=42.59 E-value=38 Score=19.99 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=23.5
Q ss_pred CCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHH
Q 030881 21 RGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELS 55 (170)
Q Consensus 21 ~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~ 55 (170)
+|-.+.+-++.+..+.|.|-+. |..|....-.+.
T Consensus 26 dGGdvelv~v~~g~V~V~L~Ga-C~gCpss~~TLk 59 (88)
T 1xhj_A 26 DGGDCTLVDVEDGIVKLQLHGA-CGTCPSSTITLK 59 (88)
T ss_dssp HSCEEEEEECCSSEEEEEEESS-CCSSCHHHHHHH
T ss_pred cCCeEEEEEEECCEEEEEEeec-CCCCcchHHHHH
Confidence 5666777777777777777754 777776665555
No 343
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=41.34 E-value=51 Score=20.66 Aligned_cols=32 Identities=19% Similarity=0.130 Sum_probs=25.2
Q ss_pred eeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 136 AKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 136 ~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
.+.|.+.||+|+...-+..+.....+-|+.+.
T Consensus 67 yF~Lka~NgqvIg~Se~Y~s~~~~~~gI~sVk 98 (118)
T 2k49_A 67 YFNLKAANHQIIGTSQMYSSTAARDNGIKSVM 98 (118)
T ss_dssp EEEEECTTCCEEEEBCCCSSHHHHHHHHHHHH
T ss_pred EEEEEcCCCcEEEEcCCcCCHHHHHHHHHHHH
Confidence 77899999999999766666667777776654
No 344
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=38.32 E-value=68 Score=19.66 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=26.3
Q ss_pred ecCCCC--CCh----hhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 40 VASKCG--MTN----SNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 40 ~~~~C~--~C~----~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
-|-.|+ .|- .++-.++...+.++++|+.+--.++.
T Consensus 12 pamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~ 52 (106)
T 3ktb_A 12 PAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNLR 52 (106)
T ss_dssp CSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEETT
T ss_pred hhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 355666 443 56778888888888899988888875
No 345
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=37.55 E-value=20 Score=24.73 Aligned_cols=35 Identities=6% Similarity=-0.023 Sum_probs=25.2
Q ss_pred EEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEe
Q 030881 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAF 71 (170)
Q Consensus 34 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~i 71 (170)
..|.+|+..-||+|-...+.|.++.+++ ++.+.--
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~---~~~v~~~ 40 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLW---NIKLKLR 40 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTS---SEEEEEE
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHc---CCeEEEE
Confidence 3455666678999999999999987765 3544443
No 346
>2k7i_A UPF0339 protein ATU0232; protein of unknown function, swapped dimer. PSI2, structural genomics, unknown function; NMR {Agrobacterium tumefaciens str} SCOP: d.348.1.1
Probab=37.06 E-value=39 Score=19.78 Aligned_cols=32 Identities=16% Similarity=0.021 Sum_probs=24.6
Q ss_pred eeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 136 AKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 136 ~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
++.|...||+|+...-+..+.....+-|+.+-
T Consensus 36 rFrLkA~NGevIasSe~Y~sk~~a~~GIeSVk 67 (83)
T 2k7i_A 36 RFRFKASNGETMFSSEGYKAKASAIHAIESIK 67 (83)
T ss_dssp EEEECCTTSCCCEEBCCSSSHHHHHHHHHHHH
T ss_pred EEEEEECCCCEEEECCCcCCHHHHHHHHHHHH
Confidence 77899999999998766677777777666543
No 347
>2ijr_A Hypothetical protein API92; structural genomics, PSI, protein structure initiative; 2.70A {Yersinia pseudotuberculosis} SCOP: e.66.1.1
Probab=36.88 E-value=20 Score=26.22 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=32.6
Q ss_pred CCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHH
Q 030881 20 ARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDK 60 (170)
Q Consensus 20 ~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~ 60 (170)
..|..++...-....+-|.|=.+|||+.-+.+..|++..+-
T Consensus 207 P~Gh~~~~~r~g~~~L~v~FDTPW~PPs~ev~~~lS~~f~C 247 (300)
T 2ijr_A 207 PSGQNIIWQRDRINSLRLDFDSPSYPPSAELMGELSAVFDC 247 (300)
T ss_dssp CSCEEEEEEEEETTEEEEEEEEESSCCCHHHHHHHHHHTTC
T ss_pred CCCCceeEEeCCCCeEEEeccCCCCCChHHHHHHHhccCCe
Confidence 34666666665567889999999999999999999887663
No 348
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=36.67 E-value=2.6 Score=18.75 Aligned_cols=11 Identities=9% Similarity=0.226 Sum_probs=7.9
Q ss_pred CCCCCChhhHH
Q 030881 42 SKCGMTNSNYI 52 (170)
Q Consensus 42 ~~C~~C~~~~~ 52 (170)
.-||.|...+|
T Consensus 7 vqcpvcqq~mp 17 (29)
T 3vhs_A 7 VQCPVCQQMMP 17 (29)
T ss_dssp EECTTTCCEEE
T ss_pred eeChHHHHhCc
Confidence 35999987654
No 349
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=36.46 E-value=76 Score=19.62 Aligned_cols=26 Identities=19% Similarity=0.277 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 49 SNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 49 ~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.++-.++...+.++++|+.+--.++.
T Consensus 24 ~~L~~~~~~~~~lk~~Gi~V~RyNL~ 49 (110)
T 3kgk_A 24 QALVDFSTDVQWLKQSGVQIERFNLA 49 (110)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEETT
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEccc
Confidence 35777888888888889999998875
No 350
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=36.10 E-value=57 Score=20.80 Aligned_cols=32 Identities=19% Similarity=0.027 Sum_probs=25.0
Q ss_pred eeEEECCCCcEEEEeCCCCCchHHHHHHHHHh
Q 030881 136 AKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 167 (170)
Q Consensus 136 ~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l 167 (170)
+..|.+.||+|+....+..+....++.|+.+.
T Consensus 83 ~f~Lka~NgqvIa~Se~Y~ska~a~~gI~sVk 114 (130)
T 2k8e_A 83 YFNLKAANHQIIGSSQMYATAQSRETGIASVK 114 (130)
T ss_dssp EEEEECTTSCEEEECCCBSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHH
Confidence 77899999999998766666667777776654
No 351
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=35.70 E-value=20 Score=21.98 Aligned_cols=15 Identities=20% Similarity=0.388 Sum_probs=13.4
Q ss_pred eeEEECCCCcEEEEe
Q 030881 136 AKFLVDKNGQVVDRY 150 (170)
Q Consensus 136 ~~~lid~~G~i~~~~ 150 (170)
++.|||++|+|++-.
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 789999999999875
No 352
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=33.88 E-value=96 Score=21.05 Aligned_cols=62 Identities=16% Similarity=0.122 Sum_probs=36.6
Q ss_pred cccccc-eeeCCCCCeecCCCC----CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCC
Q 030881 10 ESIFDL-SVKDARGHEVDLSTY----KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQF 76 (170)
Q Consensus 10 ~~~p~f-~l~~~~g~~~~l~~~----~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~ 76 (170)
.+..++ .+.+.+|..+....+ .++++||.+-+..+. .. .+..+.+.+.++|..++.++....
T Consensus 14 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~--~~---~~~~~~~~l~~~g~~v~~~d~~G~ 80 (303)
T 3pe6_A 14 IPYQDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEH--SG---RYEELARMLMGLDLLVFAHDHVGH 80 (303)
T ss_dssp CBGGGSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCC--GG---GGHHHHHHHHHTTEEEEEECCTTS
T ss_pred cccCCCCeEecCCCeEEEEEEeccCCCCCeEEEEECCCCch--hh---HHHHHHHHHHhCCCcEEEeCCCCC
Confidence 333444 667778877654443 346777777764332 11 233455555556899999987533
No 353
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=33.72 E-value=11 Score=30.29 Aligned_cols=37 Identities=14% Similarity=0.069 Sum_probs=28.4
Q ss_pred ccCCcccccceeeCCCCCeecCCCC--CCcEEEEEEecC
Q 030881 6 IQNPESIFDLSVKDARGHEVDLSTY--KGKVLLIVNVAS 42 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~--~gk~~lv~f~~~ 42 (170)
...|..+|++.|.+.+|.+..|.++ .|+++||.|-..
T Consensus 445 ~~~G~r~pd~~l~~~~g~~~~l~~~l~~~~~~ll~~~~~ 483 (570)
T 3fmw_A 445 PWPGRFAGGLVLSRPSGEPVPVAELLRSARPLLLDLAGR 483 (570)
T ss_dssp SSTTCBCTTCEECCSTTCCEEHHHHSTTCCCEEECSSCB
T ss_pred ccccCcCCCceeecCCCcceeHHHHhcCCeEEEEEecCC
Confidence 3478999999998778876666664 468999998643
No 354
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=33.16 E-value=2e+02 Score=23.50 Aligned_cols=37 Identities=14% Similarity=0.107 Sum_probs=29.8
Q ss_pred ccCCcccccceeeCC-CCCeecCCC-C--CCcEEEEEEecC
Q 030881 6 IQNPESIFDLSVKDA-RGHEVDLST-Y--KGKVLLIVNVAS 42 (170)
Q Consensus 6 ~~~g~~~p~f~l~~~-~g~~~~l~~-~--~gk~~lv~f~~~ 42 (170)
+.+|..+|++.+... +|.++++.+ + .|+++|+.|-..
T Consensus 479 ~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~ 519 (665)
T 1pn0_A 479 CVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGK 519 (665)
T ss_dssp SCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEEC
T ss_pred CCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCC
Confidence 458999999999764 888888888 4 379999998754
No 355
>2kii_A Putative uncharacterized protein; H-NOX, unknown function; HET: HEM; NMR {Shewanella oneidensis} PDB: 2kil_A*
Probab=30.36 E-value=1.2e+02 Score=20.16 Aligned_cols=53 Identities=8% Similarity=-0.026 Sum_probs=37.4
Q ss_pred CCcccccceeeCCCCCeecCCCCCCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEee
Q 030881 8 NPESIFDLSVKDARGHEVDLSTYKGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFP 72 (170)
Q Consensus 8 ~g~~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is 72 (170)
++...|.|.+...+. .-+++.+.+..| .|.-....++..++.| +..+.+--+.
T Consensus 111 p~~~~Psf~~~~~~~----------~~l~l~Y~S~R~-l~~~~~Gli~~~A~~f-~~~v~i~~~~ 163 (181)
T 2kii_A 111 HEPSLPHINGQLLPN----------NQIALRYSSPRR-LCFCAEGLLFGAAQHF-QQKIQISHDT 163 (181)
T ss_dssp SCSCCCEEEEEECSS----------SEEEEEEECTTC-CHHHHHHHHHHHHHHT-TCCEEEEEEE
T ss_pred CCCCCCeeEEEECCC----------CEEEEEEecCCC-hHHHHHHHHHHHHHHh-CCCeEEEEEe
Confidence 566777777765433 244567777777 9999999999999999 4446665443
No 356
>3bqa_A Sensor protein PHOQ; histidine kinase sensor domain, ATP-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding; 2.00A {Escherichia coli} PDB: 3bq8_A 1yax_A
Probab=30.24 E-value=41 Score=21.80 Aligned_cols=26 Identities=23% Similarity=0.255 Sum_probs=17.9
Q ss_pred eeEEECCCCcEEEEeCCCCCchHHHHHHH
Q 030881 136 AKFLVDKNGQVVDRYYPTTSLLSLEHDIK 164 (170)
Q Consensus 136 ~~~lid~~G~i~~~~~~~~~~~~l~~~l~ 164 (170)
-++|.|.+|+++++. .+..++++.|+
T Consensus 43 LvlIYDe~G~lLW~q---r~vP~le~~I~ 68 (148)
T 3bqa_A 43 MTLIYDENGQLLWAQ---RDVPWLMKMIQ 68 (148)
T ss_dssp EEEEECTTSCEEEES---SCCHHHHHHSC
T ss_pred EEEEEcCCCcEEEec---CcchHHHhhcC
Confidence 347889999999994 33344666553
No 357
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=29.10 E-value=1.4e+02 Score=20.60 Aligned_cols=36 Identities=6% Similarity=0.003 Sum_probs=26.2
Q ss_pred CcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEe
Q 030881 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAF 71 (170)
Q Consensus 32 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~i 71 (170)
.++++|-|+..| |......+.+++..+++. +.|..+
T Consensus 24 ~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~-~~F~~~ 59 (252)
T 2h8l_A 24 KDASIVGFFDDS---FSEAHSEFLKAASNLRDN-YRFAHT 59 (252)
T ss_dssp SSCEEEEEESCT---TSHHHHHHHHHHHHTTTT-SCEEEE
T ss_pred CCeEEEEEECCC---CChHHHHHHHHHHhcccC-cEEEEE
Confidence 467788888887 466778888888888654 655554
No 358
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=28.57 E-value=77 Score=20.21 Aligned_cols=31 Identities=13% Similarity=0.109 Sum_probs=22.8
Q ss_pred ceeEEECCCCcEEEE-eCCCCCchHHHHHHHH
Q 030881 135 FAKFLVDKNGQVVDR-YYPTTSLLSLEHDIKK 165 (170)
Q Consensus 135 p~~~lid~~G~i~~~-~~~~~~~~~l~~~l~~ 165 (170)
|..+++|.+|+++-+ .....+.+++.+.|.+
T Consensus 57 P~LvL~D~~G~e~E~I~Iekw~~d~I~efL~e 88 (129)
T 2a2p_A 57 PELVLLSRNYQELERIPLSQMTRDEINALVQE 88 (129)
T ss_dssp CEEEEECSSSCCCEEEECSSSCHHHHHHHHHH
T ss_pred CEEEEecCCCCEEEEeecccCCHHHHHHHHHH
Confidence 388999999997666 3444577778888764
No 359
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=28.31 E-value=1.5e+02 Score=20.54 Aligned_cols=36 Identities=6% Similarity=0.200 Sum_probs=27.5
Q ss_pred CcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEe
Q 030881 32 GKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAF 71 (170)
Q Consensus 32 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~i 71 (170)
.++++|-|+..+| ....+.+.++++.+++. +.|...
T Consensus 25 ~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~-~~F~~t 60 (250)
T 3ec3_A 25 DDVVILGVFQGVG---DPGYLQYQDAANTLRED-YKFHHT 60 (250)
T ss_dssp SSCEEEEECSCTT---CHHHHHHHHHHHHHTTT-CCEEEE
T ss_pred CCeEEEEEEcCCC---chHHHHHHHHHHhhhcC-cEEEEE
Confidence 5678888888764 67888889999888665 777665
No 360
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=27.94 E-value=2e+02 Score=21.79 Aligned_cols=43 Identities=14% Similarity=0.251 Sum_probs=31.1
Q ss_pred hhhHHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCC
Q 030881 48 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEF 99 (170)
Q Consensus 48 ~~~~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (170)
.+..|.+.++.+.++++|+.++-||-. ...+.+-+.++.++.|
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg---------~~~~v~~ia~~lg~~y 262 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSAS---------FIDIVRAFATDTNNNY 262 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEE---------EHHHHHHHHHCTTSSC
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCC---------cHHHHHHHHHHhCccc
Confidence 456799999999999999999999863 3444444443655544
No 361
>3l7h_A RE64145P, roadblock; LC7, KM23, dynein, light chain, hydrolase, protei transport; 1.95A {Drosophila melanogaster} SCOP: d.110.7.1 PDB: 3l9k_A 1z09_A 2e8j_A 1y4o_A
Probab=27.64 E-value=18 Score=21.84 Aligned_cols=15 Identities=20% Similarity=0.344 Sum_probs=12.9
Q ss_pred eeEEECCCCcEEEEe
Q 030881 136 AKFLVDKNGQVVDRY 150 (170)
Q Consensus 136 ~~~lid~~G~i~~~~ 150 (170)
.++++|++|.+++..
T Consensus 20 G~iI~n~~G~pirst 34 (97)
T 3l7h_A 20 GTIVVNNEGIPVKST 34 (97)
T ss_dssp EEEEEETTSCEEEES
T ss_pred EEEEECCCCCEeEEe
Confidence 679999999999873
No 362
>3v67_A Sensor protein CPXA; PAS fold, signal sensing, signaling protein, merohedral twin; 2.30A {Vibrio parahaemolyticus}
Probab=26.39 E-value=38 Score=21.82 Aligned_cols=16 Identities=31% Similarity=0.372 Sum_probs=13.9
Q ss_pred ceeEEECCCCcEEEEe
Q 030881 135 FAKFLVDKNGQVVDRY 150 (170)
Q Consensus 135 p~~~lid~~G~i~~~~ 150 (170)
|++||+|.+|+|+...
T Consensus 56 ~r~~l~d~eG~Il~~~ 71 (138)
T 3v67_A 56 PRVFFSDYNGNVLTTD 71 (138)
T ss_dssp CEEEEECTTSCEECCC
T ss_pred ccEEEEcCCCCEecCC
Confidence 3889999999999873
No 363
>2a4h_A Selenoprotein SEP15; redox, oxidoreductase; NMR {Drosophila melanogaster} SCOP: c.47.1.23
Probab=26.34 E-value=63 Score=20.50 Aligned_cols=34 Identities=18% Similarity=0.140 Sum_probs=26.1
Q ss_pred ceeEEECCCCcEEEEe-CCCCCchHHHHHHHHHhc
Q 030881 135 FAKFLVDKNGQVVDRY-YPTTSLLSLEHDIKKLLG 168 (170)
Q Consensus 135 p~~~lid~~G~i~~~~-~~~~~~~~l~~~l~~~l~ 168 (170)
|...++|.+|+++-+. ...-+.+++.+.|.+-|+
T Consensus 63 P~LvLlD~~Ge~~E~I~IekW~tD~I~efL~ekL~ 97 (126)
T 2a4h_A 63 PVVKLLDASGKVQETLSITKWNTDTVEEFFETHLA 97 (126)
T ss_dssp CEEEECCSSSCCSEEEECSSSSCSHHHHHHHHHSC
T ss_pred CEEEEecCCCCEeeEeccccCCHHHHHHHHHHHhh
Confidence 3889999999977663 345577789999987765
No 364
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=26.01 E-value=1.1e+02 Score=18.21 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=26.6
Q ss_pred EEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecC
Q 030881 34 VLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCN 74 (170)
Q Consensus 34 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d 74 (170)
.+++++-++- .......|.+.++.+.++++|+.+.-+|..
T Consensus 4 ~i~~D~DgtL-~~~~~~~~~~~~~l~~L~~~G~~~~i~S~~ 43 (137)
T 2pr7_A 4 GLIVDYAGVL-DGTDEDQRRWRNLLAAAKKNGVGTVILSND 43 (137)
T ss_dssp EEEECSTTTT-SSCHHHHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred EEEEecccee-cCCCccCccHHHHHHHHHHCCCEEEEEeCC
Confidence 3444444333 233456788888888998889988888754
No 365
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=25.98 E-value=98 Score=18.51 Aligned_cols=34 Identities=12% Similarity=-0.004 Sum_probs=26.8
Q ss_pred eeEEECCCCcEEEEeCCCCCchHHHHHHHHHhcC
Q 030881 136 AKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 169 (170)
Q Consensus 136 ~~~lid~~G~i~~~~~~~~~~~~l~~~l~~~l~~ 169 (170)
.++..-.+|+.........+.+++.+.|+.+.+.
T Consensus 67 ~i~a~Y~~G~ek~i~l~n~s~~eI~~~l~~l~~~ 100 (102)
T 1s3a_A 67 KLWARYAFGQETNVPLNNFSADQVTRALENVLSG 100 (102)
T ss_dssp EEEEEESSCCEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 6566666888888777778999999999988753
No 366
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=25.83 E-value=63 Score=25.31 Aligned_cols=33 Identities=9% Similarity=0.031 Sum_probs=25.2
Q ss_pred cCCcccccceeeCCCCCeecCCCC--CCcEEEEEEe
Q 030881 7 QNPESIFDLSVKDARGHEVDLSTY--KGKVLLIVNV 40 (170)
Q Consensus 7 ~~g~~~p~f~l~~~~g~~~~l~~~--~gk~~lv~f~ 40 (170)
..|..+|++.+...+| ..++.++ .|+++||.|-
T Consensus 396 ~~G~r~p~~~l~~~~~-~~~l~d~~~~~~~~ll~~~ 430 (499)
T 2qa2_A 396 LLGMRMPHQELVRAHG-KTSTTELLHPARGVLLDIA 430 (499)
T ss_dssp TTTSBCCCCEEECSSS-EEETTGGGTTCSEEEEECS
T ss_pred CCCCCCCCCeeecCCC-ceeHHHHhcCCeEEEEEec
Confidence 4699999999986556 4666664 4689999884
No 367
>1yd6_A UVRC; DNA binding protein; 2.00A {Bacillus caldotenax}
Probab=24.57 E-value=96 Score=18.58 Aligned_cols=19 Identities=21% Similarity=0.118 Sum_probs=12.7
Q ss_pred ccCcee-EEECCCCcEEEEe
Q 030881 132 QWNFAK-FLVDKNGQVVDRY 150 (170)
Q Consensus 132 ~~~p~~-~lid~~G~i~~~~ 150 (170)
|..|.+ ++.|.+|+|+|..
T Consensus 13 P~~pGVY~~~d~~g~vlYVG 32 (99)
T 1yd6_A 13 PEQPGCYLMKDKHGTVIYVG 32 (99)
T ss_dssp CSSCEEEEEECSSCCEEEEE
T ss_pred CCCCeEEEEEcCCCCEEEEe
Confidence 333344 4668899999983
No 368
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=23.39 E-value=2e+02 Score=20.22 Aligned_cols=60 Identities=17% Similarity=0.126 Sum_probs=36.0
Q ss_pred cccc-eeeCCCCCeecCCCC----CCcEEEEEEecCCCCCChhhHHHHHHHHHHhccCCcEEEEeecCCC
Q 030881 12 IFDL-SVKDARGHEVDLSTY----KGKVLLIVNVASKCGMTNSNYIELSQLYDKYKDQGLEILAFPCNQF 76 (170)
Q Consensus 12 ~p~f-~l~~~~g~~~~l~~~----~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~v~~v~is~d~~ 76 (170)
..++ .+.+.+|..+....+ .++++||.+-+..+.. . .+..+.+.+.++|+.++.++....
T Consensus 34 ~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~-~----~~~~~~~~l~~~g~~vi~~D~~G~ 98 (342)
T 3hju_A 34 YQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHS-G----RYEELARMLMGLDLLVFAHDHVGH 98 (342)
T ss_dssp TTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCG-G----GGHHHHHHHHTTTEEEEEECCTTS
T ss_pred cccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCccc-c----hHHHHHHHHHhCCCeEEEEcCCCC
Confidence 3344 566778876644333 3467777777543321 1 334556666667899999987533
No 369
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=21.62 E-value=2.1e+02 Score=19.95 Aligned_cols=41 Identities=2% Similarity=-0.091 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhccCCcEEEEeecCCCCCCCCCChHHHHHHHHhhcCCCCC
Q 030881 51 YIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFP 100 (170)
Q Consensus 51 ~~~l~~~~~~~~~~~v~~v~is~d~~~~~~~~~~~~~~~~~~~~~~~~~p 100 (170)
.+...+..++++++|+.++-.+-. +...+.++.+ ..++..+
T Consensus 40 ~~~~~~al~~l~~~G~~v~iaTGR--------~~~~~~~~~~-~l~~~~~ 80 (285)
T 3pgv_A 40 TPYAKETLKLLTARGINFVFATGR--------HYIDVGQIRD-NLGIRSY 80 (285)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSS--------CGGGGHHHHH-HHCSCCE
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCC--------CHHHHHHHHH-hcCCCcc
Confidence 345555566667778888777643 3444555554 4455433
No 370
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=20.35 E-value=65 Score=25.63 Aligned_cols=22 Identities=18% Similarity=0.086 Sum_probs=16.2
Q ss_pred ccccCceeEEECCCCcEEEEeC
Q 030881 130 DIQWNFAKFLVDKNGQVVDRYY 151 (170)
Q Consensus 130 ~i~~~p~~~lid~~G~i~~~~~ 151 (170)
+|...|+.++++++|++.....
T Consensus 202 gV~~~Pslvl~~~nGk~~~~~v 223 (519)
T 3t58_A 202 GVTDFPSCYLLLRNGSVSRVPV 223 (519)
T ss_dssp TCCCSSEEEEEETTSCEEECCC
T ss_pred CCCCCCeEEEEeCCCceeeccc
Confidence 3444459999999999877643
No 371
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=20.35 E-value=58 Score=19.19 Aligned_cols=14 Identities=7% Similarity=0.197 Sum_probs=12.6
Q ss_pred eeEEECCCCcEEEE
Q 030881 136 AKFLVDKNGQVVDR 149 (170)
Q Consensus 136 ~~~lid~~G~i~~~ 149 (170)
.++++|.+|+|++.
T Consensus 17 gviv~D~~g~I~~~ 30 (121)
T 4hi4_A 17 NVMIADNDLNIIYM 30 (121)
T ss_dssp EEEEEETTCBEEEE
T ss_pred cEEEEcCCCeEEEe
Confidence 56899999999998
No 372
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=20.20 E-value=1e+02 Score=19.85 Aligned_cols=35 Identities=6% Similarity=0.006 Sum_probs=21.7
Q ss_pred EecCC-CC--CChhh---HHHHHHHHHHhccCCcEEEEeec
Q 030881 39 NVASK-CG--MTNSN---YIELSQLYDKYKDQGLEILAFPC 73 (170)
Q Consensus 39 f~~~~-C~--~C~~~---~~~l~~~~~~~~~~~v~~v~is~ 73 (170)
+|..| || .|... +.++++-..++.+.=|.+++++.
T Consensus 47 yW~mWkLPmF~~td~~~Vl~Ele~C~k~~p~~YVRliGfD~ 87 (138)
T 1bwv_S 47 YWEIWGLPLFDVTDPAAVLFEINACRKARSNFYIKVVGFSS 87 (138)
T ss_dssp CCEECSSCBCSCCCHHHHHHHHHHHHHHCTTSEEEEEEEEC
T ss_pred EEeccCCCCcCCCCHHHHHHHHHHHHHHCCCCeEEEEEEeC
Confidence 45555 55 56644 55555556666655588888863
Done!