BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030882
(170 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ZMB5|T184A_HUMAN Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1
Length = 413
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 29 HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
H S+ P+EQ+ II ++L+ PIYA DS++ L+ G ++++ +SV++CYEA VI F
Sbjct: 77 HLRSYTVPQEQRYIIRLLLIVPIYAFDSWLSLL-LLGDHQYYVYFDSVRDCYEAFVIYSF 135
Query: 89 LALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVI 148
L+L + YL + + EI+G+ I S R + L+ K T QF ++
Sbjct: 136 LSLCFQYLG---GEGAIMAEIRGKPIKSSCLYGTCCLRGMTYSIGFLRFCKQATLQFCLV 192
Query: 149 RPVCSILMIALQLLG 163
+PV ++ I LQ G
Sbjct: 193 KPVMAVTTIILQAFG 207
>sp|Q8BG09|T184B_MOUSE Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1
Length = 407
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Query: 29 HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
H + +P EQ+ I+ I+ + PIYA DS++ L+ F + ++++ +V++CYEA VI F
Sbjct: 68 HLRCYSRPNEQRHIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEAFVIYNF 126
Query: 89 LALLYSYLNISISKNIVPDEIKGREIHHS--FPMTLFQPRTARLNHHTLKLLKDWTWQFV 146
L+L Y YL ++ + EI+G+ I S + +T + L+ K T QF
Sbjct: 127 LSLCYEYLG---GESAIMSEIRGKAIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFC 181
Query: 147 VIRPVCSILMIALQLLG 163
V++P+ ++ + LQ G
Sbjct: 182 VVKPLMAVSTVILQAFG 198
>sp|A2VDL9|T184B_BOVIN Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1
Length = 407
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Query: 29 HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
H + P EQ+ I+ I+ + PIYA DS++ L+ F + ++++ +V++CYEALVI F
Sbjct: 68 HLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNF 126
Query: 89 LALLYSYLNISISKNIVPDEIKGREIHHS--FPMTLFQPRTARLNHHTLKLLKDWTWQFV 146
L+L Y YL ++ + EI+G+ I S + +T + L+ K T QF
Sbjct: 127 LSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFC 181
Query: 147 VIRPVCSILMIALQLLG 163
V++P+ ++ + LQ G
Sbjct: 182 VVKPLMAVSTVVLQAFG 198
>sp|Q9Y519|T184B_HUMAN Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2
Length = 407
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Query: 29 HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
H + P EQ+ I+ I+ + PIYA DS++ L+ F + ++++ +V++CYEALVI F
Sbjct: 68 HLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNF 126
Query: 89 LALLYSYLNISISKNIVPDEIKGREIHHS--FPMTLFQPRTARLNHHTLKLLKDWTWQFV 146
L+L Y YL ++ + EI+G+ I S + +T + L+ K T QF
Sbjct: 127 LSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFC 181
Query: 147 VIRPVCSILMIALQLLG 163
V++P+ ++ + LQ G
Sbjct: 182 VVKPLMAVSTVVLQAFG 198
>sp|Q3UFJ6|T184A_MOUSE Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1
Length = 425
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 81/146 (55%), Gaps = 8/146 (5%)
Query: 15 VMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLE 74
++LT H Q+ S H S+ P+EQ+ +I ++ + PIYA DS++ + G ++++ +
Sbjct: 70 LLLTGH---QIYS-HLRSYTAPREQRFVIRLLFIVPIYAFDSWL-SLLLLGGHPYYVYFD 124
Query: 75 SVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHT 134
SV++CYEA VI FL L + YL ++ + EI+G+ I S R +
Sbjct: 125 SVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITF 181
Query: 135 LKLLKDWTWQFVVIRPVCSILMIALQ 160
L+ K T QF +++PV +++ I LQ
Sbjct: 182 LRFCKQATLQFCIVKPVMALITIILQ 207
>sp|Q4QQS1|T184A_RAT Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2
SV=1
Length = 425
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 81/146 (55%), Gaps = 8/146 (5%)
Query: 15 VMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLE 74
++LT H Q+ S H S+ P+EQ+ +I ++ + PIYA DS++ + G ++++ +
Sbjct: 70 LLLTGH---QIYS-HLRSYTVPREQRFVIRLLFIVPIYAFDSWL-SLLLLGGHPYYVYFD 124
Query: 75 SVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHT 134
SV++CYEA VI FL L + YL ++ + EI+G+ I S R +
Sbjct: 125 SVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITF 181
Query: 135 LKLLKDWTWQFVVIRPVCSILMIALQ 160
L+ K T QF +++PV +++ I LQ
Sbjct: 182 LRFCKQATLQFCIVKPVMALITIILQ 207
>sp|Q1RMW2|T184A_BOVIN Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1
Length = 414
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 29 HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
H S+ P EQ+ II ++ + P+YA DS++ + G +++ +SV++CYEA VI F
Sbjct: 67 HLRSYTVPHEQRYIIRLLFIVPVYAFDSWL-SLLLLGGHQHYIYFDSVRDCYEAFVIYSF 125
Query: 89 LALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVI 148
L+L + YL ++ + EI+G+ + S R + L+ K T QF ++
Sbjct: 126 LSLCFQYLG---GESAIMAEIRGKPVRTSCFHGTCCLRGMTYSIGFLRFCKQATLQFCIV 182
Query: 149 RPVCSILMIALQLLG 163
+P+ +++ I LQ G
Sbjct: 183 KPIMALVTIVLQAFG 197
>sp|Q9NVA4|T184C_HUMAN Transmembrane protein 184C OS=Homo sapiens GN=TMEM184C PE=2 SV=2
Length = 438
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + ++LT S ++ +H + + +P+ QK II I+ M PIY++DS++ L
Sbjct: 52 AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPGIA 107
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL ++ E K ++ H FP P A +
Sbjct: 108 IYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLILEAKDQQKH--FPPLCCCPPWA-M 164
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
L K Q+ V+RP +I+ + +LLG+
Sbjct: 165 GEVLLFRCKLGVLQYTVVRPFTTIVALICELLGI 198
>sp|Q5RET6|T184C_PONAB Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1
Length = 438
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + ++LT S ++ +H + + +P+ QK II I+ M PIY++DS++ L
Sbjct: 52 AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPGIA 107
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL ++ E K ++ H FP P A +
Sbjct: 108 IYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLILEAKDQQKH--FPPLCCCPPWA-M 164
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
L K Q+ V+RP +I+ + +LLG+
Sbjct: 165 GEVLLFRCKLGVLQYTVVRPFTTIVALICELLGI 198
>sp|Q3TPR7|T184C_MOUSE Transmembrane protein 184C OS=Mus musculus GN=Tmem184c PE=2 SV=1
Length = 525
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 7 TFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGS 66
++ A + ++LT S + +H + + +P+ QK II I+ M PIY++DS+V L+
Sbjct: 48 SWFIAGIFLLLTIPVSLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWVALV----Y 103
Query: 67 KAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPR 126
+++++ +ECYEA VI F+ L +YL I I+ E K ++ +H P+ P
Sbjct: 104 PKIAIYVDTWRECYEAYVIYNFMIFLTNYLTIRFPNLILHLEAKDQQ-NHILPLCCCPPW 162
Query: 127 TARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
+ L K Q+ V+RP+ ++ + ++L V
Sbjct: 163 A--MGEMLLFRCKLGVLQYTVVRPITTVTALVCEILDV 198
>sp|Q17QL9|T184C_BOVIN Transmembrane protein 184C OS=Bos taurus GN=TMEM184C PE=2 SV=1
Length = 438
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + ++LT S ++ +H + + +P+ QK II I+ M PIY++DS++ L +
Sbjct: 52 AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPSIA 107
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL ++ E K ++ H P+ P T +
Sbjct: 108 IYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLIIEAKDQQKHFP-PLCCCPPWT--M 164
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
L K Q+ V+RP +I+ + +LL +
Sbjct: 165 GEVLLFRCKLGVLQYTVVRPFTTIIALVCELLDI 198
>sp|Q810F5|T184C_RAT Transmembrane protein 184C OS=Rattus norvegicus GN=Tmem184c PE=2
SV=1
Length = 503
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
Query: 4 ARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDF 63
+V F+A + ++LT S + +H + + +P+ QK II I+ M PIY++DS+V L
Sbjct: 46 TKVWFIAG-IFLLLTIPVSMCGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWVAL--- 101
Query: 64 QGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLF 123
+++++ +ECYEA VI F+ L +YL I ++ E K ++ +H P+
Sbjct: 102 -KYPKIAIYVDTWRECYEAYVIYNFMIFLTNYLTIRFPNLMLHLEAKDQQ-NHLPPLCCC 159
Query: 124 QPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
P + L K Q+ V+RP+ ++ + ++LGV
Sbjct: 160 PPWA--MGEMLLFRCKLGVLQYTVVRPITTVTSLVCEILGV 198
>sp|Q6GQE1|T184C_XENLA Transmembrane protein 184C OS=Xenopus laevis GN=tmem184c PE=2 SV=1
Length = 444
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + V++T S + +H + + +P+ QK II I+ M PIY++DS++ L
Sbjct: 50 AGIFVLMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWIAL----KYPDIA 105
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL + E K ++ H P+ P +
Sbjct: 106 IYVDTCRECYEAYVIYNFMIFLLNYLTNRCPNLALVLEAKDQQ-RHLPPLCCCPPWA--M 162
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
L K Q+ V+RPV +++ + QL GV
Sbjct: 163 GDVLLFRCKLGVLQYTVVRPVTTVIALICQLTGV 196
>sp|Q28CV2|T184C_XENTR Transmembrane protein 184C OS=Xenopus tropicalis GN=tmem184c PE=2
SV=1
Length = 443
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + V++T S + +H + + +P+ QK II I+ M PIY++DS++ L
Sbjct: 50 AGIFVLMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWIAL----KYPDIA 105
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL + E K ++ H P+ P +
Sbjct: 106 IYVDTCRECYEAYVIYNFMIFLLNYLTNRCPNLALVLEAKDQQ-RHLPPLCCCPPWA--M 162
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
L K Q+ V+RPV +++ + QL GV
Sbjct: 163 GDVLLFRCKLGVLQYTVVRPVTTVIALICQLTGV 196
>sp|Q54WM0|T1843_DICDI Transmembrane protein 184 homolog DDB_G0279555 OS=Dictyostelium
discoideum GN=tmem184C PE=3 SV=1
Length = 351
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 9 MAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKA 68
+ A VC + S L+ +H ++ P+ QK I+ I++M PIY++DS++ L + S
Sbjct: 3 IVAGVCSGVAILLSFYLIYKHLRNYTNPELQKYIVRILIMVPIYSVDSWLSLRFVELS-- 60
Query: 69 FFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTA 128
++ + V++ YEA V+ F +L+ +Y+ ++V + H FP+T P+
Sbjct: 61 --LYFDVVRDTYEAYVLYCFFSLIVAYIERDF--DLVELLHSKEPLPHPFPLTCL-PKI- 114
Query: 129 RLNHHTLKLLKDWTWQFVVIRPVCSILMIALQ 160
+L+ L K + QFV I+P+ +I+ + L+
Sbjct: 115 KLDRGFLTNCKRFVLQFVFIKPIVAIISLVLE 146
>sp|Q5ZMP3|T184C_CHICK Transmembrane protein 184C OS=Gallus gallus GN=TMEM184C PE=2 SV=1
Length = 445
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 7/154 (4%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + +++T S + +H + + +P+ QK II I+ M PIY++DS++ L
Sbjct: 50 AGIFLLMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPNIA 105
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL ++ E K ++ H P P A +
Sbjct: 106 IYVDTCRECYEAYVIYNFMVFLSNYLTNRYPNLVLIIEAKDQQRH--LPPLCCCPSWA-M 162
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
L K Q+ V+RP +I+ + +L+GV
Sbjct: 163 GEVLLFRCKLGVLQYTVVRPFTTIIALICELVGV 196
>sp|Q54PI4|T1841_DICDI Transmembrane protein 184 homolog DDB_G0284525 OS=Dictyostelium
discoideum GN=tmem184A PE=3 SV=1
Length = 493
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 8 FMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSK 67
F A++ V+L T S L+ +H + +P Q+ I+ I+ M PIYAI S + L+ +
Sbjct: 53 FALASLFVLLATILSAHLIYKHLKYYTQPDHQRYIVRIVFMIPIYAIYSLLSLL-LHNYQ 111
Query: 68 AFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTL-FQPR 126
+F L ++CYEA V+ F AL SY KN+V + P+ F+P
Sbjct: 112 VYFALL---RDCYEAYVLYMFFALCVSYG--GGDKNLVTHFTSHPVMRLPMPLFFKFKPN 166
Query: 127 TARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
A L + +L Q+V++RP ++ ++ G+
Sbjct: 167 EAFLQVCRMGML-----QYVLVRPAVTLASAIFEIFGL 199
>sp|Q75JN3|T1842_DICDI Transmembrane protein 184 homolog DDB_G0276041 OS=Dictyostelium
discoideum GN=tmem184B PE=3 SV=1
Length = 507
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 25 LLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALV 84
L+ +HF+ + KP QK I+ II++APIYAI S + L F + + +F + ++CYEA V
Sbjct: 33 LILQHFIHYNKPNHQKYIVRIIMIAPIYAIHSLLSL--FFKRQFWALFFDISRDCYEAYV 90
Query: 85 IAKFLALLYSYLNISISKNIVPDEIKGREIHH-SFPMTLFQPRTARLNHHTLKLLKDWTW 143
+ F LL +L + + + + ++ ++P+ F T + + + L L
Sbjct: 91 LYCFFKLLICFLG---GEEALKELLSKKDTQPLTWPLGYFFSFTPKKSFYRLSL--GLVL 145
Query: 144 QFVVIRPVCSIL 155
Q+ +I+P +I+
Sbjct: 146 QYAIIKPTLAIV 157
>sp|P36142|TM184_YEAST Transmembrane protein 184 homolog YKR051W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YKR051W PE=1
SV=1
Length = 418
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 16 MLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLES 75
++ T S ++ H L+++KP EQ+ I I+L+ PI+++ G+I + ++ +++
Sbjct: 19 IIATIISFYTITRHLLNYRKPYEQRLSIRILLLVPIFSVSCASGIIKPEAAQ---FYVDP 75
Query: 76 VKECYEALVI 85
++E YEA VI
Sbjct: 76 IREFYEAFVI 85
>sp|Q09906|TM184_SCHPO Transmembrane protein 184 homolog C30D11.06c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC30D11.06c PE=1 SV=1
Length = 426
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 29 HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
H ++KKP Q++++ I++M IY+ S++ + + + F E +E YEA + F
Sbjct: 27 HLKNYKKPVLQRSVVRILMMIVIYSSVSFLSVYNEKIGSIF----EPFREIYEAFALYCF 82
Query: 89 LALLYSYLN 97
LL YL
Sbjct: 83 FCLLIDYLG 91
>sp|Q895W4|META_CLOTE Homoserine O-succinyltransferase OS=Clostridium tetani (strain
Massachusetts / E88) GN=metA PE=3 SV=1
Length = 306
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 23/135 (17%)
Query: 19 THFSTQLLSEHFLSWKKP----KEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLE 74
TH S + +H LS+ K K +K +II AP+ I ++ + FQ K F
Sbjct: 74 THHSKNISEKHLLSFYKTIDDIKNEKFDGMIITGAPVEQI-AFEDVDYFQELKTIMDF-- 130
Query: 75 SVKECYEALVI--AKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNH 132
SV + L I AL Y Y +I+KNI+P ++ G HH +N
Sbjct: 131 SVTNVFSTLHICWGAQAALYYHY---NINKNILPKKVFGVFSHH-----------ININK 176
Query: 133 HTLKLLKDWTWQFVV 147
T+KLL+ + +F V
Sbjct: 177 GTVKLLRGFDDKFYV 191
>sp|Q6R5J2|DISP1_DANRE Protein dispatched homolog 1 OS=Danio rerio GN=disp1 PE=2 SV=1
Length = 1464
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 121 TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGVL 165
TL PR R + +L+ DW VV+ +C++L++ L+G+L
Sbjct: 151 TLSPPRPFRFPKNYAELIADWP---VVVLGICTVLIVVCALVGIL 192
>sp|P96709|YDGK_BACSU Uncharacterized MFS-type transporter YdgK OS=Bacillus subtilis
(strain 168) GN=ydgK PE=3 SV=1
Length = 402
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 83 LVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPM----TLFQPRTARLNHHTLKLL 138
LV A+FL + + +S+ IV D GRE+ F + T P A + + LL
Sbjct: 103 LVAARFLQGFTASAGLVLSRAIVRDVFTGRELSKFFSLLMVITAVAPMVAPMTGGAILLL 162
Query: 139 KDWTWQ 144
TW
Sbjct: 163 PFATWH 168
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.140 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,940,133
Number of Sequences: 539616
Number of extensions: 1977532
Number of successful extensions: 5099
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 5056
Number of HSP's gapped (non-prelim): 26
length of query: 170
length of database: 191,569,459
effective HSP length: 109
effective length of query: 61
effective length of database: 132,751,315
effective search space: 8097830215
effective search space used: 8097830215
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 57 (26.6 bits)