BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030888
(170 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449435752|ref|XP_004135658.1| PREDICTED: uncharacterized protein LOC101217561 [Cucumis sativus]
gi|449485804|ref|XP_004157278.1| PREDICTED: uncharacterized protein LOC101225513 [Cucumis sativus]
Length = 234
Score = 244 bits (624), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 117/157 (74%), Positives = 132/157 (84%)
Query: 12 HNHHLTLSQYRSIFTTRTLQGSWMDSIKGVFTGKKSSSEDGSVSSESFTLLRFADELKKA 71
HN +LTL Q RSIF+T L GSWMD IKGV +GKK+S+E +SSESFTLLRFADELK A
Sbjct: 33 HNCYLTLLQSRSIFSTTQLHGSWMDKIKGVISGKKNSTEGTDISSESFTLLRFADELKNA 92
Query: 72 RKLGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQEAAKQCNCTIA 131
R++G LKQYIVGRSS TFAD FEKQEA++R LG FD GEN+Q SQKQEAAK CNCTIA
Sbjct: 93 RRVGALKQYIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIA 152
Query: 132 EVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
EVEN L+KF WAKEAQKKIEKLKEEGKP+P ++AEVQ
Sbjct: 153 EVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQ 189
>gi|225451203|ref|XP_002274439.1| PREDICTED: protein translocase subunit SecA 1-like [Vitis vinifera]
Length = 227
Score = 231 bits (589), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/158 (68%), Positives = 129/158 (81%), Gaps = 1/158 (0%)
Query: 11 YHNHHLTLSQYRSIFTTRTLQGSWMDSIKGVFTGKKSSSEDGSVSSESFTLLRFADELKK 70
YH L SQ+RSIF+T L SWMD IKGV TGKK++ DG +++E FTLLRFA+ELK
Sbjct: 29 YHYRQLPPSQHRSIFSTSHLDASWMDKIKGVLTGKKAAP-DGQITTEEFTLLRFANELKA 87
Query: 71 ARKLGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQEAAKQCNCTI 130
AR GT K+++VGRSS TFAD F KQEA++R LG FDP+G+NLQ SQKQEAAK CNCTI
Sbjct: 88 ARAAGTFKRFVVGRSSEATFADAFGKQEAIIRYLGRFDPSGDNLQTSQKQEAAKNCNCTI 147
Query: 131 AEVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
A+VEN LAKFTWAK+A KK+EKLKEEGKP+PKSMAE+Q
Sbjct: 148 ADVENALAKFTWAKQAHKKLEKLKEEGKPIPKSMAELQ 185
>gi|359806862|ref|NP_001241571.1| uncharacterized protein LOC100791282 [Glycine max]
gi|255636789|gb|ACU18728.1| unknown [Glycine max]
Length = 211
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 131/169 (77%), Gaps = 1/169 (0%)
Query: 1 MRSLRILTSI-YHNHHLTLSQYRSIFTTRTLQGSWMDSIKGVFTGKKSSSEDGSVSSESF 59
M SLRIL I Y + QYR+I +T LQGSWM+ +K V TG+ S+ + +SESF
Sbjct: 1 MPSLRILNKICYSINQNCKCQYRTISSTAQLQGSWMEKVKNVITGQNSTPQSQGDASESF 60
Query: 60 TLLRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQK 119
+LLRFADE+K A+++G K+++VGRSS TF+ F+K EA++R LGA DP GENLQ +QK
Sbjct: 61 SLLRFADEMKNAKRIGAFKEFMVGRSSEATFSSAFDKYEAIIRFLGALDPTGENLQTTQK 120
Query: 120 QEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
QEAAK CNCTIA+VEN LAKFTWAKEAQKK+EKLKEEGKPMPKS AEVQ
Sbjct: 121 QEAAKHCNCTIADVENALAKFTWAKEAQKKLEKLKEEGKPMPKSFAEVQ 169
>gi|224123310|ref|XP_002319047.1| predicted protein [Populus trichocarpa]
gi|222857423|gb|EEE94970.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 108/165 (65%), Positives = 132/165 (80%), Gaps = 7/165 (4%)
Query: 7 LTSIYHNH---HLTLSQYRSIFTTRTLQGSWMDSIKGVFTGKKSSSEDGSVSSESFTLLR 63
L S+ ++H HL SQ+R I +T + SWMD+IKGVFTGKK+ +ED + ESFTLL
Sbjct: 20 LCSLSYSHIDSHLITSQHRLISSTAPV-SSWMDTIKGVFTGKKAETED---TPESFTLLS 75
Query: 64 FADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQEAA 123
FAD +K AR++G+LKQ++VGRSS TF+ FEKQEA++R LGA DP GENLQ SQKQEAA
Sbjct: 76 FADGMKNARRVGSLKQFVVGRSSEATFSSAFEKQEAIIRYLGALDPTGENLQTSQKQEAA 135
Query: 124 KQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
K CNCTIA+VE TL+KF WAKEAQ K++KLKEEGKPMPK+MAEVQ
Sbjct: 136 KHCNCTIADVEITLSKFIWAKEAQNKLQKLKEEGKPMPKTMAEVQ 180
>gi|356504090|ref|XP_003520832.1| PREDICTED: uncharacterized protein LOC100792311 [Glycine max]
Length = 222
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 133/173 (76%), Gaps = 5/173 (2%)
Query: 1 MRSLRILTSI-YHNHHLTLSQYRSIFTTRTLQGSWMDSIKGVFTGKKSSSE---DGS-VS 55
M SLRIL I Y + +YR+I +T LQGSWM+ +K V TG+KS+ + D S V+
Sbjct: 1 MPSLRILNKICYSINQNCKYKYRTISSTAQLQGSWMEKVKNVITGQKSTPQSQGDASQVT 60
Query: 56 SESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQ 115
S+SFTLLRFADE+K A+++G K+++ GRSS TF+ F+K EA++R LGA DP GENL
Sbjct: 61 SDSFTLLRFADEMKNAKRIGAFKEFMAGRSSEATFSSAFDKYEAIIRSLGALDPTGENLP 120
Query: 116 VSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
+QKQEAAK CNCTIA+VE+ LAKFTWAKEAQKKI+KLKEEGKPMPKS AEVQ
Sbjct: 121 TAQKQEAAKHCNCTIADVEDALAKFTWAKEAQKKIQKLKEEGKPMPKSFAEVQ 173
>gi|357512173|ref|XP_003626375.1| hypothetical protein MTR_7g114390 [Medicago truncatula]
gi|355501390|gb|AES82593.1| hypothetical protein MTR_7g114390 [Medicago truncatula]
Length = 254
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 123/171 (71%), Gaps = 5/171 (2%)
Query: 1 MRSLRILTSIYHNHHLTLS---QYRSIFTTRTLQGSWMDSIKGVFTGKKSSSEDGSVSSE 57
M +LRI I + HH L QYRSI TT LQ SWMD +K VFTG+KS E +
Sbjct: 1 MAALRIANRIINYHHNLLYNNYQYRSISTTVHLQSSWMDKVKNVFTGQKS--EGAPPDAS 58
Query: 58 SFTLLRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVS 117
FTLL FADE+KKARK+G K+YIVGRSS TF+ EK E ++R L AFD GENL +
Sbjct: 59 QFTLLNFADEMKKARKVGAFKEYIVGRSSEVTFSTAIEKYEVIIRYLAAFDYTGENLTTN 118
Query: 118 QKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
QK EAAK CNCTIAEVEN LAKFTWAKEA KKI+KL +EGKPMPK+MAE+Q
Sbjct: 119 QKHEAAKHCNCTIAEVENALAKFTWAKEAHKKIQKLNQEGKPMPKNMAELQ 169
>gi|255542408|ref|XP_002512267.1| conserved hypothetical protein [Ricinus communis]
gi|223548228|gb|EEF49719.1| conserved hypothetical protein [Ricinus communis]
Length = 224
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/167 (62%), Positives = 132/167 (79%), Gaps = 3/167 (1%)
Query: 2 RSLRILTSIYHNHHLTLSQYRSIFTTRTLQGSWMDSIKGVFTGKKSSSEDGSVSSESFTL 61
+SL + S + ++ Q+R IF+T + SWMDSIKGVFTG+K S+D +V +SFTL
Sbjct: 16 KSLFLFYSRSNTRLISSQQHRFIFSTASAY-SWMDSIKGVFTGQKGDSKDTAV--QSFTL 72
Query: 62 LRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQE 121
+RFADELK AR++G+ K++IVGRSS TF+D FEK E ++R L FDP GENLQ +QKQE
Sbjct: 73 IRFADELKNARRVGSFKKFIVGRSSEATFSDAFEKMERIIRYLSGFDPTGENLQTTQKQE 132
Query: 122 AAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
AAK CNCTIAEVE +LA+FTWAKEAQKK++KLKEEGKP PKS+AE+Q
Sbjct: 133 AAKHCNCTIAEVERSLAQFTWAKEAQKKLQKLKEEGKPAPKSIAEIQ 179
>gi|388491116|gb|AFK33624.1| unknown [Lotus japonicus]
Length = 213
Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 130/173 (75%), Gaps = 7/173 (4%)
Query: 1 MRSLRILTSIYHNHHLTLSQY---RSIFTTRTLQGSWMDSIKGVFTGKKSSS--EDGSVS 55
M + RI +I H LSQY RSIF+T LQ SW+D +K VFTG+K+++ E+ S +
Sbjct: 1 MAATRI--TIAKKIHHRLSQYSNSRSIFSTPQLQNSWVDKVKTVFTGQKTTTTTENPSST 58
Query: 56 SESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQ 115
++SFTLL FADE+KKARK+G K Y+VGRSS TF FEK EA++R LG DP GE LQ
Sbjct: 59 TDSFTLLHFADEMKKARKIGAFKDYVVGRSSEVTFTTAFEKNEAIIRFLGVLDPTGEKLQ 118
Query: 116 VSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
+QKQ AAK CNCTI +VEN LA+FTWAKEAQKKIEKLKEEGKPMP S+AEVQ
Sbjct: 119 SAQKQAAAKHCNCTIIDVENALAEFTWAKEAQKKIEKLKEEGKPMPTSIAEVQ 171
>gi|297829008|ref|XP_002882386.1| hypothetical protein ARALYDRAFT_477772 [Arabidopsis lyrata subsp.
lyrata]
gi|297328226|gb|EFH58645.1| hypothetical protein ARALYDRAFT_477772 [Arabidopsis lyrata subsp.
lyrata]
Length = 230
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 122/154 (79%), Gaps = 2/154 (1%)
Query: 16 LTLSQYRSIFTTRTLQGSWMDSIKGVFTGKKSSS-EDGSVSSESFTLLRFADELKKARKL 74
L SQ+RSI +T L G WMDSIKGVFTG K + E+ ++ E+FTLLRFADELK AR+L
Sbjct: 36 LIPSQHRSITSTAPLNG-WMDSIKGVFTGNKDTPLEESNLPVEAFTLLRFADELKNARRL 94
Query: 75 GTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQEAAKQCNCTIAEVE 134
G KQYIVGRSS TF+D FEKQEAV+R LGA D GENLQ SQKQ+AAK C CTI +VE
Sbjct: 95 GKFKQYIVGRSSEATFSDAFEKQEAVIRYLGALDATGENLQASQKQDAAKHCKCTITDVE 154
Query: 135 NTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
NTLAKFTWA++A KK+ +LKE GKP+PK+M E+Q
Sbjct: 155 NTLAKFTWARQAHKKMAELKEGGKPLPKNMGELQ 188
>gi|79393348|ref|NP_187146.2| uncharacterized protein [Arabidopsis thaliana]
gi|51969142|dbj|BAD43263.1| unknown protein [Arabidopsis thaliana]
gi|332640643|gb|AEE74164.1| uncharacterized protein [Arabidopsis thaliana]
Length = 231
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 101/150 (67%), Positives = 119/150 (79%), Gaps = 2/150 (1%)
Query: 20 QYRSIFTTRTLQGSWMDSIKGVFTGKKSSS-EDGSVSSESFTLLRFADELKKARKLGTLK 78
Q RSI +T L G WMDSIKGVFTG K + E+ ++ E+FTLLRFADELK AR+LG K
Sbjct: 41 QQRSITSTAPLNG-WMDSIKGVFTGNKDTPLEESNLPVEAFTLLRFADELKNARRLGKFK 99
Query: 79 QYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQEAAKQCNCTIAEVENTLA 138
QYIVGRSS TFAD FEKQEAV+R LGA D GENLQ SQKQ+AAK C CTI +VENTL+
Sbjct: 100 QYIVGRSSEATFADAFEKQEAVIRYLGALDATGENLQASQKQDAAKHCKCTITDVENTLS 159
Query: 139 KFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
KFTWA++A KK+ +LKE GKP+PK+M E+Q
Sbjct: 160 KFTWARQAHKKMTELKEGGKPLPKNMGELQ 189
>gi|298204926|emb|CBI34233.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 114/134 (85%), Gaps = 1/134 (0%)
Query: 35 MDSIKGVFTGKKSSSEDGSVSSESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADTF 94
MD IKGV TGKK++ DG +++E FTLLRFA+ELK AR GT K+++VGRSS TFAD F
Sbjct: 1 MDKIKGVLTGKKAAP-DGQITTEEFTLLRFANELKAARAAGTFKRFVVGRSSEATFADAF 59
Query: 95 EKQEAVLRCLGAFDPNGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLK 154
KQEA++R LG FDP+G+NLQ SQKQEAAK CNCTIA+VEN LAKFTWAK+A KK+EKLK
Sbjct: 60 GKQEAIIRYLGRFDPSGDNLQTSQKQEAAKNCNCTIADVENALAKFTWAKQAHKKLEKLK 119
Query: 155 EEGKPMPKSMAEVQ 168
EEGKP+PKSMAE+Q
Sbjct: 120 EEGKPIPKSMAELQ 133
>gi|12322842|gb|AAG51404.1|AC009465_4 unknown protein; 32997-32284 [Arabidopsis thaliana]
Length = 152
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/136 (69%), Positives = 110/136 (80%), Gaps = 1/136 (0%)
Query: 35 MDSIKGVFTGKKSSS-EDGSVSSESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADT 93
MDSIKGVFTG K + E+ ++ E+FTLLRFADELK AR+LG KQYIVGRSS TFAD
Sbjct: 1 MDSIKGVFTGNKDTPLEESNLPVEAFTLLRFADELKNARRLGKFKQYIVGRSSEATFADA 60
Query: 94 FEKQEAVLRCLGAFDPNGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKL 153
FEKQEAV+R LGA D GENLQ SQKQ+AAK C CTI +VENTL+KFTWA++A KK+ +L
Sbjct: 61 FEKQEAVIRYLGALDATGENLQASQKQDAAKHCKCTITDVENTLSKFTWARQAHKKMTEL 120
Query: 154 KEEGKPMPKSMAEVQF 169
KE GKP+PK+M EV F
Sbjct: 121 KEGGKPLPKNMGEVFF 136
>gi|116780835|gb|ABK21838.1| unknown [Picea sitchensis]
Length = 237
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/186 (52%), Positives = 125/186 (67%), Gaps = 18/186 (9%)
Query: 1 MRSLRILTSIYHN--HHLT---------LSQYRSIFTT--RTLQG-----SWMDSIKGVF 42
+RS R+LT Y HHL+ L +R I TT + ++ SW+D IKGVF
Sbjct: 10 IRSRRLLTLHYSGIRHHLSQNKHPVPADLLPFRCITTTPLKNIEATVTRLSWVDKIKGVF 69
Query: 43 TGKKSSSEDGSVSSESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLR 102
TG+K + ++ S TL +ADELKKARKLG+L Q++ GRSS T +D FEKQEA++R
Sbjct: 70 TGQKPEDSQPAGAASSVTLENYADELKKARKLGSLGQFVRGRSSEATMSDAFEKQEAIIR 129
Query: 103 CLGAFDPNGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPMPK 162
L + D +GE L+ K EAAK C+CTIA+VEN LAKFTW KEA KK+EKLKE+GKPMPK
Sbjct: 130 ALASHDSSGERLEAKHKAEAAKLCSCTIADVENALAKFTWTKEANKKMEKLKEQGKPMPK 189
Query: 163 SMAEVQ 168
S+ EVQ
Sbjct: 190 SLEEVQ 195
>gi|242095556|ref|XP_002438268.1| hypothetical protein SORBIDRAFT_10g010880 [Sorghum bicolor]
gi|241916491|gb|EER89635.1| hypothetical protein SORBIDRAFT_10g010880 [Sorghum bicolor]
Length = 210
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 115/168 (68%), Gaps = 5/168 (2%)
Query: 2 RSLRILTSIYHNHHLTLSQYRSIFTTRTLQG-SWMDSIKGVFTGKKSSSEDGSVSSESFT 60
++L I T H+ L+ R I +T L W D IK TGKK E+GS +S SFT
Sbjct: 5 QALHIFTPSRRAMHI-LTPSRGIASTPHLSSFGWFDKIKSTITGKKP--EEGSEAS-SFT 60
Query: 61 LLRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQ 120
L++FAD ++KARKLGT K ++ GR+S T + FEK AVLR LGA DP GE L+ + K
Sbjct: 61 LIQFADTMEKARKLGTFKNFVAGRASEATVVNAFEKHSAVLRYLGAIDPTGEKLRNTDKI 120
Query: 121 EAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
A K CNCTIAEVE+ LAK+TWAKEAQKKIEKLKEEGKP+PKS EVQ
Sbjct: 121 NATKHCNCTIAEVEHILAKYTWAKEAQKKIEKLKEEGKPLPKSFNEVQ 168
>gi|194707062|gb|ACF87615.1| unknown [Zea mays]
gi|195638928|gb|ACG38932.1| hypothetical protein [Zea mays]
gi|238013658|gb|ACR37864.1| unknown [Zea mays]
gi|413953761|gb|AFW86410.1| hypothetical protein ZEAMMB73_030357 [Zea mays]
Length = 210
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 114/168 (67%), Gaps = 5/168 (2%)
Query: 2 RSLRILTSIYHNHHLTLSQYRSIFTTRTLQG-SWMDSIKGVFTGKKSSSEDGSVSSESFT 60
++L I T H+ L+ R I +T L W D IK TGKK E+ S +S SFT
Sbjct: 5 QALHIFTPSRRAMHI-LTSSRGIASTPHLSSFGWFDKIKSTITGKKP--EEASEAS-SFT 60
Query: 61 LLRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQ 120
L++FAD ++KARKLGT K ++ GR+S T + FEK AVLR LGA DP GENL+ + K
Sbjct: 61 LIQFADTMEKARKLGTFKNFVAGRASEATVVNVFEKHSAVLRYLGAIDPTGENLRNTDKI 120
Query: 121 EAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
A K CNCTIA+VE+ LAK+TWAKEAQKKI KLKEEGKP+PKS EVQ
Sbjct: 121 NATKHCNCTIADVEHILAKYTWAKEAQKKIAKLKEEGKPLPKSFNEVQ 168
>gi|226530470|ref|NP_001143221.1| uncharacterized protein LOC100275732 [Zea mays]
gi|195616174|gb|ACG29917.1| hypothetical protein [Zea mays]
Length = 210
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 113/168 (67%), Gaps = 5/168 (2%)
Query: 2 RSLRILTSIYHNHHLTLSQYRSIFTTRTLQG-SWMDSIKGVFTGKKSSSEDGSVSSESFT 60
++L I T H+ L+ R I +T L W D IK TGKK E+ S +S SFT
Sbjct: 5 QALHIFTPSRRAMHI-LTSSRGIASTPHLSSFGWFDKIKSTITGKKP--EEASEAS-SFT 60
Query: 61 LLRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQ 120
L +FAD ++KARKLGT K ++ GR+S T + FEK AVLR LGA DP GENL+ + K
Sbjct: 61 LTQFADTMEKARKLGTFKNFVAGRASEATVVNVFEKHSAVLRYLGAIDPTGENLRNTDKI 120
Query: 121 EAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
A K CNCTIA+VE+ LAK+TWAKEAQKKI KLKEEGKP+PKS EVQ
Sbjct: 121 NATKHCNCTIADVEHILAKYTWAKEAQKKIAKLKEEGKPLPKSFNEVQ 168
>gi|115467688|ref|NP_001057443.1| Os06g0298500 [Oryza sativa Japonica Group]
gi|53792506|dbj|BAD53470.1| unknown protein [Oryza sativa Japonica Group]
gi|113595483|dbj|BAF19357.1| Os06g0298500 [Oryza sativa Japonica Group]
gi|222635433|gb|EEE65565.1| hypothetical protein OsJ_21059 [Oryza sativa Japonica Group]
Length = 201
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 108/155 (69%), Gaps = 4/155 (2%)
Query: 15 HLTLSQYRSIFTTRTLQG-SWMDSIKGVFTGKKSSSEDGSVSSESFTLLRFADELKKARK 73
HL L+ R IF+T L W D IK FTGKK ++ + S +FTLL+FAD ++KARK
Sbjct: 8 HL-LTASRGIFSTPHLASLGWFDKIKSTFTGKKP--DEATDPSANFTLLQFADSMEKARK 64
Query: 74 LGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQEAAKQCNCTIAEV 133
LGT K +++GR S T + FEK AVLR LG DP GE L+ S K A K CNCTIA+V
Sbjct: 65 LGTFKNFVMGRCSEATVVNAFEKHSAVLRYLGTIDPTGEKLKNSDKIGATKHCNCTIADV 124
Query: 134 ENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
E+ LAK+TWAKEAQKKI KLKEEGKP+PK+ EV+
Sbjct: 125 EHILAKYTWAKEAQKKIVKLKEEGKPLPKNFNEVK 159
>gi|218198017|gb|EEC80444.1| hypothetical protein OsI_22640 [Oryza sativa Indica Group]
Length = 201
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/155 (56%), Positives = 107/155 (69%), Gaps = 4/155 (2%)
Query: 15 HLTLSQYRSIFTTRTLQG-SWMDSIKGVFTGKKSSSEDGSVSSESFTLLRFADELKKARK 73
HL L+ R I +T L W D IK FTGKK ++ + S +FTLL+FAD ++KARK
Sbjct: 8 HL-LTASRGISSTPHLASLGWFDKIKSTFTGKKP--DEATDPSANFTLLQFADSMEKARK 64
Query: 74 LGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQEAAKQCNCTIAEV 133
LGT K +++GR S T + FEK AVLR LG DP GE L+ S K A K CNCTIA+V
Sbjct: 65 LGTFKNFVMGRCSEATVVNAFEKHSAVLRYLGTIDPTGEKLKNSDKIGATKHCNCTIADV 124
Query: 134 ENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
E+ LAK+TWAKEAQKKI KLKEEGKP+PK+ EV+
Sbjct: 125 EHILAKYTWAKEAQKKIVKLKEEGKPLPKNFNEVK 159
>gi|357124495|ref|XP_003563935.1| PREDICTED: uncharacterized protein LOC100823040 [Brachypodium
distachyon]
Length = 202
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 102/155 (65%), Gaps = 3/155 (1%)
Query: 15 HLTLSQYRSIFTTRTLQG-SWMDSIKGVFTGKKSSSEDGSVSSESFTLLRFADELKKARK 73
HL L+ R I +T L W+D IK F GKK SS SFTL +FAD + A+K
Sbjct: 8 HL-LTASRGISSTPHLASLGWIDKIKSTFIGKKPDDSPFPPSS-SFTLQKFADSMDMAKK 65
Query: 74 LGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQEAAKQCNCTIAEV 133
+GT K Y+ GR+ T A FEK AVLR L DP GE L+ S K A K CNCTIA+V
Sbjct: 66 VGTFKNYVSGRAGEATVAAAFEKHSAVLRYLATIDPTGEKLKSSDKISATKHCNCTIADV 125
Query: 134 ENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
E+ LAK+TWAKEAQKKIEKLKEEGKPMPKS +EVQ
Sbjct: 126 EHILAKYTWAKEAQKKIEKLKEEGKPMPKSFSEVQ 160
>gi|147804779|emb|CAN76022.1| hypothetical protein VITISV_027071 [Vitis vinifera]
Length = 738
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/102 (71%), Positives = 85/102 (83%)
Query: 65 ADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQEAAK 124
+ L AR GT K+++VGRSS TFAD F KQEA++R LG FDP+G+NLQ SQKQEAAK
Sbjct: 566 GEPLXAARAAGTFKRFVVGRSSEATFADAFGKQEAIIRYLGRFDPSGDNLQTSQKQEAAK 625
Query: 125 QCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAE 166
CNCTIA+VEN LAKFTWAK+A KK+EKLKEEGKP+PKSMAE
Sbjct: 626 NCNCTIADVENALAKFTWAKQAHKKLEKLKEEGKPIPKSMAE 667
>gi|326492758|dbj|BAJ90235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 202
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 103/169 (60%), Gaps = 10/169 (5%)
Query: 1 MRSLRILTSIYHNHHLTLSQYRSIFTTRTLQG-SWMDSIKGVFTGKKSSSEDGSVSSESF 59
M S R+L H LT S R I +T L W++ IK FTGKK+ + SESF
Sbjct: 1 MASRRVL------HLLTAS--RGISSTPHLASLGWINKIKNTFTGKKAD-DSPFPPSESF 51
Query: 60 TLLRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQK 119
L FA+ ++ ARK+GT K ++ G T EK AVLR L DP GE L S K
Sbjct: 52 NLNMFANSMEMARKVGTFKNFVAGSCGEATVLAACEKHAAVLRFLATIDPTGEKLTNSDK 111
Query: 120 QEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
A K CNCTIA+VE+ LAK+TWAK+AQKKIEKLK EGKP+PK+ +EVQ
Sbjct: 112 ISATKHCNCTIADVEHILAKYTWAKDAQKKIEKLKAEGKPVPKTFSEVQ 160
>gi|168005523|ref|XP_001755460.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693588|gb|EDQ79940.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 313
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 87/149 (58%), Gaps = 15/149 (10%)
Query: 33 SWMDSIKGVFTGKKSS-----------SEDGSVSSESFTLLRFADELKKARKLGTLKQYI 81
SW +KGVF G SS ++ ++ FT+ FADEL KAR+ G++ Q+
Sbjct: 57 SWFQKLKGVFKGIPSSESRPQGPEPKVADPKAILPGDFTMENFADELGKARRFGSMTQFG 116
Query: 82 VG--RSSATTFADTFEKQEAVLRCLGAFDPNGENLQVSQKQEAAKQCNCTIAEVENTLAK 139
G R + + ++QE +LR L DP + QK + A +C CT+ +VEN ++K
Sbjct: 117 RGLPRGGEMSAVKSLQRQEEILRALHKRDP--VRVGAQQKADVAAECGCTVFDVENVISK 174
Query: 140 FTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
+ WAKEA ++++KL+ EGKP+PK++ EV+
Sbjct: 175 YEWAKEANRRVKKLEAEGKPLPKTLNEVE 203
>gi|302797324|ref|XP_002980423.1| hypothetical protein SELMODRAFT_444490 [Selaginella moellendorffii]
gi|300152039|gb|EFJ18683.1| hypothetical protein SELMODRAFT_444490 [Selaginella moellendorffii]
Length = 245
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 89/191 (46%), Gaps = 38/191 (19%)
Query: 10 IYHNHHLTLSQYRSIFTTRTLQGSWMDSIKGVFTGKK---------------SSSEDGSV 54
I + +Q + +L+ SW IKG+F K +S E S
Sbjct: 21 IARGMAVASNQENAAAAEESLKSSWFQRIKGLFVRDKPAESKPMEESKPPLRASIEQASK 80
Query: 55 SSES-----------------FTLLRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQ 97
SES +++ FADELKKAR G+L V +S + EKQ
Sbjct: 81 PSESIASKIVNTVKSAVAPSVYSMEAFADELKKARYAGSL----VKGASKEQISAILEKQ 136
Query: 98 EAVLRCLGAFDPNGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEG 157
E ++R L + E + SQ E A +C EVE+ L+K+ W KEA K+EKL++EG
Sbjct: 137 EKMIRALATY--KTEQIGASQVAEVAVKCKARAEEVEDILSKYKWTKEAHSKVEKLRKEG 194
Query: 158 KPMPKSMAEVQ 168
KP+PKS EV+
Sbjct: 195 KPLPKSFDEVE 205
>gi|302758496|ref|XP_002962671.1| hypothetical protein SELMODRAFT_404630 [Selaginella moellendorffii]
gi|300169532|gb|EFJ36134.1| hypothetical protein SELMODRAFT_404630 [Selaginella moellendorffii]
Length = 243
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 88/191 (46%), Gaps = 38/191 (19%)
Query: 10 IYHNHHLTLSQYRSIFTTRTLQGSWMDSIKGVFTGKK---------------SSSEDGSV 54
I + +Q + +L+ SW IKG+F K +S E
Sbjct: 19 IARGMAVASNQENAAAAEESLKSSWFQRIKGLFVRDKPAESKPMEESKPPLRASIEQAPK 78
Query: 55 SSES-----------------FTLLRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQ 97
SES +++ FADELKKAR G+L V +S + EKQ
Sbjct: 79 PSESMASKIVNTVKSAVAPSVYSMEAFADELKKARYAGSL----VKGASKEQISAILEKQ 134
Query: 98 EAVLRCLGAFDPNGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEG 157
E ++R L + E + SQ E A +C EVE+ L+K+ W KEA K+EKL++EG
Sbjct: 135 EKMIRALATY--KTEQIGASQVAEVAVKCKARAEEVEDILSKYKWTKEAHSKVEKLRKEG 192
Query: 158 KPMPKSMAEVQ 168
KP+PKS EV+
Sbjct: 193 KPLPKSFDEVE 203
>gi|384252409|gb|EIE25885.1| hypothetical protein COCSUDRAFT_60895 [Coccomyxa subellipsoidea
C-169]
Length = 80
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 37/52 (71%)
Query: 117 SQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPMPKSMAEVQ 168
+++Q A+Q CT+ +V++ +AK+ W + ++ +LK+EGKP+P S+ EV+
Sbjct: 15 AERQRTAEQVGCTVGQVDDCIAKYRWMQHMTARMAQLKKEGKPLPTSIDEVE 66
>gi|307108938|gb|EFN57177.1| hypothetical protein CHLNCDRAFT_143567 [Chlorella variabilis]
Length = 287
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 36 DSIKGV--FTGKKSSSEDGSVSSESFTLLRFADELKKARKLGTLKQYIVG-----RSSAT 88
D + G+ + ++ + G + L FA + AR++G L ++ G SSA
Sbjct: 83 DPLTGITKWLAQRMPTALGGIGEGDLDLETFASTITNARRMGGLTGFMHGTAAVKDSSAQ 142
Query: 89 TFADTFEKQEAVL-----RCLGAFDPNGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWA 143
FE+ + R L FD + ++ A CT +V++ +A+F W
Sbjct: 143 GAMRMFEQIIGAMWPEEKRDLALFD-------GAARKRVAADVGCTTGQVDDCIARFLWT 195
Query: 144 KEAQKKIEKLKEEGKPMPKSM 164
++ +++ +LK+EGK +P SM
Sbjct: 196 RQMTRRLAELKKEGKELPTSM 216
>gi|256824943|ref|YP_003148903.1| signal recognition particle subunit FFH/SRP54 (srp54) [Kytococcus
sedentarius DSM 20547]
gi|256688336|gb|ACV06138.1| signal recognition particle subunit FFH/SRP54 (srp54) [Kytococcus
sedentarius DSM 20547]
Length = 604
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 54 VSSESFTLLRFADELKKARKLGTLKQYI-----VGRSSATTFA---DTFEKQEAVLRCLG 105
+S E FT F +++ +K+G LKQ + +G+ A A F++ EA++R +
Sbjct: 341 MSDEDFTFDDFLEQMSAIKKMGNLKQLLGMMPGMGQMRAQIEALDEKEFDRVEAMVRSMT 400
Query: 106 AFDPNG-ENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKK 149
F+ N + + S++ AK T++EV L +F A++ K+
Sbjct: 401 PFERNHPKQINGSRRARIAKGAGTTVSEVNQLLERFGAAQKMMKQ 445
>gi|255326590|ref|ZP_05367667.1| signal recognition particle protein [Rothia mucilaginosa ATCC
25296]
gi|283457889|ref|YP_003362490.1| signal recognition particle GTPase [Rothia mucilaginosa DY-18]
gi|422324642|ref|ZP_16405679.1| signal recognition particle protein [Rothia mucilaginosa M508]
gi|255296330|gb|EET75670.1| signal recognition particle protein [Rothia mucilaginosa ATCC
25296]
gi|283133905|dbj|BAI64670.1| signal recognition particle GTPase [Rothia mucilaginosa DY-18]
gi|353344164|gb|EHB88477.1| signal recognition particle protein [Rothia mucilaginosa M508]
Length = 525
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 54 VSSESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADTFE--------KQEAVLRCLG 105
+ E FT F ++++ RKLG++K+ ++ A E + EA++R +
Sbjct: 332 IDQEDFTFEDFLAQMQQIRKLGSMKKLLMMMPGAAQMRQQLEAFDEREIDRVEAIVRSMT 391
Query: 106 AFDPNGENL-QVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKP 159
+ + S++ AK T++EV + +F A++ KK+ K G P
Sbjct: 392 PHERVAPRIINGSRRARIAKGAGVTVSEVNQLMERFAQAQKMMKKLASGKMPGMP 446
>gi|383808902|ref|ZP_09964431.1| signal recognition particle protein [Rothia aeria F0474]
gi|383448296|gb|EID51264.1| signal recognition particle protein [Rothia aeria F0474]
Length = 526
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 54 VSSESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADTFE--------KQEAVLRCLG 105
+ E FT F ++++ RKLG++K+ ++ A E + EA++R +
Sbjct: 332 IDQEDFTFEDFLAQMQQIRKLGSMKKLLMMMPGAAQIRQQLEAFDEREIDRVEAIVRSMT 391
Query: 106 AFDPNGENL-QVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKP 159
+ + S++ AK T++EV + +F A++ KK+ K G P
Sbjct: 392 PHERVAPKIINGSRRARIAKGAGVTVSEVNQLMERFAQAQKMMKKLAAGKMSGVP 446
>gi|300741688|ref|ZP_07071709.1| signal recognition particle protein [Rothia dentocariosa M567]
gi|300380873|gb|EFJ77435.1| signal recognition particle protein [Rothia dentocariosa M567]
Length = 528
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 54 VSSESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADTFE--------KQEAVLRCLG 105
+ E FT F ++++ RKLG++K+ ++ A E + EA++R +
Sbjct: 332 IDQEDFTFDDFLAQMQQIRKLGSMKKLLMMMPGAAQMRQQLESFDEREIDRVEAIVRSMT 391
Query: 106 AFDPNGENL-QVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKP 159
+ + S++ AK T++EV + +F A++ KK+ K G P
Sbjct: 392 PHERVAPKIINGSRRARIAKGSGVTVSEVNQLMERFAQAQKMMKKLATGKMSGMP 446
>gi|311113791|ref|YP_003985013.1| signal recognition particle protein [Rothia dentocariosa ATCC
17931]
gi|310945285|gb|ADP41579.1| signal recognition particle protein [Rothia dentocariosa ATCC
17931]
Length = 528
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 54 VSSESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADTFE--------KQEAVLRCLG 105
+ E FT F ++++ RKLG++K+ ++ A E + EA++R +
Sbjct: 332 IDQEDFTFDDFLAQMQQIRKLGSMKKLLMMMPGAAQMRQQLESFDEREIDRVEAIVRSMT 391
Query: 106 AFDPNGENL-QVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKP 159
+ + S++ AK T++EV + +F A++ KK+ K G P
Sbjct: 392 PHERVAPKIINGSRRARIAKGSGVTVSEVNQLMERFAQAQKMMKKLATGKMSGMP 446
>gi|377572989|ref|ZP_09802065.1| signal recognition particle protein [Mobilicoccus pelagius NBRC
104925]
gi|377538263|dbj|GAB47230.1| signal recognition particle protein [Mobilicoccus pelagius NBRC
104925]
Length = 558
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 54 VSSESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADT--------FEKQEAVLRCLG 105
++ E FT F ++ RK+G LKQ + D F++ EA++R +
Sbjct: 341 LADEDFTFDDFLQQMAAVRKMGNLKQLLGMMPGMNQMRDQLNALDDKEFDRVEAMVRSMT 400
Query: 106 AFD-PNGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLK 154
F+ + + + S++ AK ++EV L +F EAQK I +LK
Sbjct: 401 PFERTHPKQINGSRRARIAKGSGVHVSEVNALLERF---GEAQKMIRQLK 447
>gi|50294546|ref|XP_449684.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608268|sp|Q6FJB0.1|CLU_CANGA RecName: Full=Clustered mitochondria protein homolog; AltName:
Full=Protein TIF31 homolog
gi|49528998|emb|CAG62660.1| unnamed protein product [Candida glabrata]
Length = 1267
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 16/98 (16%)
Query: 81 IVGRSSATTFADTFEKQEAVLRCLGAFDPNGENL--QVSQKQEAAKQCNCTIAEVEN--- 135
I+ + ADTF K +R LG F NL + +KQE A + V+N
Sbjct: 677 IISPYNGEHLADTFHKNGVNMRYLGKF----ANLVKEELRKQEEAHEAKLAQVIVDNKEY 732
Query: 136 ------TLAKF-TWAKEAQKKIEKLKEEGKPMPKSMAE 166
L K T KE Q KI KL +EGK +PK + E
Sbjct: 733 EEWEKSYLQKIETMIKERQAKINKLVQEGKEVPKELTE 770
>gi|399156376|ref|ZP_10756443.1| signal recognition particle protein [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 446
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 59 FTLLRFADELKKARKLGTLKQYIVG-----RSSATTFADTFEKQ----EAVLRCLGAFDP 109
FTL F D+L+ RK+G++K ++G +S+ A+ +K+ +A++ + +
Sbjct: 327 FTLEDFRDQLRSMRKMGSIKD-VIGMLPGMNASSVNDANIDDKKLIHIDAIISSMTIKER 385
Query: 110 NGENL-QVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGKPM 160
N L S++ AK T++E+ L +F ++ +K+ K+ GK M
Sbjct: 386 NNHKLMNGSRRIRIAKGSGTTVSELNRLLKQFIQMRKMMQKLTKVSNPGKAM 437
>gi|223939677|ref|ZP_03631550.1| signal recognition particle protein [bacterium Ellin514]
gi|223891634|gb|EEF58122.1| signal recognition particle protein [bacterium Ellin514]
Length = 449
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 18/120 (15%)
Query: 59 FTLLRFADELKKARKLGTLKQYI---VGRSSATTFADT------FEKQEAVLRCLGAFDP 109
F L F D+L++ +KLG+L+ + G S AD F++ E ++ C F
Sbjct: 326 FNLEDFLDQLRQMKKLGSLESIVGLLPGGSDMLKGADLNKSEKEFKRMEGMI-CAMTFKE 384
Query: 110 NGEN--LQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKL-----KEEGKP-MP 161
+ L S++ AK T+ E+ N L +F ++ KK+ KL K+ G P MP
Sbjct: 385 RRQPVILNASRRIRIAKGSGVTVTELNNMLNRFNQMQQMMKKMGKLQKMMMKKGGMPGMP 444
>gi|84498340|ref|ZP_00997137.1| signal recognition particle protein [Janibacter sp. HTCC2649]
gi|84381840|gb|EAP97723.1| signal recognition particle protein [Janibacter sp. HTCC2649]
Length = 536
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 44 GKKSSSEDGSVSSESFTLLRFADELKKARKLGTLKQYI-----VGRSSA---TTFADTFE 95
G+ + E +++E FT F ++ +K+G+LK + +G+ SA F+
Sbjct: 331 GQAAEMERKFLAAEDFTFDDFLQQMSAIKKMGSLKSMLKMMPGMGQMSAQLDNLDEREFD 390
Query: 96 KQEAVLRCLGAFDPNG-ENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKL 153
+ EA++R + F+ N + + S++ A T++EV L +F EAQK +++L
Sbjct: 391 RVEAMVRSMTPFERNHPKQINGSRRARIAGGSGVTVSEVNQLLERF---GEAQKMMKQL 446
>gi|160938317|ref|ZP_02085672.1| hypothetical protein CLOBOL_03213 [Clostridium bolteae ATCC
BAA-613]
gi|158438690|gb|EDP16447.1| hypothetical protein CLOBOL_03213 [Clostridium bolteae ATCC
BAA-613]
Length = 292
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 19/89 (21%)
Query: 81 IVGR--------SSATTFADTFEKQEAVLR-CLGAFDPNGENLQVSQKQEAAKQCNCTIA 131
I+GR SS TT D E +L LG F L++ + AA CNCT
Sbjct: 188 IIGRLENKLKEISSITTLLDVGNTPEMILEYVLGEF-----GLEIGGRLPAAFYCNCTKD 242
Query: 132 EVENTLAKFTWAKEAQKKIEKLKEEGKPM 160
VE L +K I ++ E+GKP+
Sbjct: 243 RVEKALISV-----GRKDIGEMIEDGKPI 266
>gi|406574975|ref|ZP_11050689.1| signal recognition particle protein [Janibacter hoylei PVAS-1]
gi|404555591|gb|EKA61079.1| signal recognition particle protein [Janibacter hoylei PVAS-1]
Length = 544
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 44 GKKSSSEDGSVSSESFTLLRFADELKKARKLGTLKQYI-----VGRSSA---TTFADTFE 95
G+ + ++ E FT F ++ +++G+LK + +G+ SA F+
Sbjct: 331 GQAEEMQRKFLAEEDFTFDDFLQQMSAIKRMGSLKSMLKMMPGMGQMSAQLDNLDEREFD 390
Query: 96 KQEAVLRCLGAFD-PNGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKL 153
+ EA++R + F+ + + + S++ AK T++EV L +FT EAQK +++L
Sbjct: 391 RVEAMVRSMTPFERTHPKQINGSRRSRIAKGSGVTVSEVNQLLERFT---EAQKMMKQL 446
>gi|403736842|ref|ZP_10949803.1| signal recognition particle protein [Austwickia chelonae NBRC
105200]
gi|403192937|dbj|GAB76573.1| signal recognition particle protein [Austwickia chelonae NBRC
105200]
Length = 556
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 54 VSSESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADT--------FEKQEAVLRCLG 105
++ E FT F ++ +K+G+LKQ + D F++ EA++R +
Sbjct: 341 LTDEDFTFDDFLQQMSAIKKMGSLKQLLGMMPGMNQMRDQLNALDEREFDRVEAMVRSMT 400
Query: 106 AFD-PNGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLK 154
F+ + + + S++ AK ++ EV L +F EAQK + +L+
Sbjct: 401 PFERTHPKQINGSRRARIAKGSGVSVTEVNQLLERF---GEAQKMMRQLR 447
>gi|403713839|ref|ZP_10939898.1| signal recognition particle protein [Kineosphaera limosa NBRC
100340]
gi|403211945|dbj|GAB94581.1| signal recognition particle protein [Kineosphaera limosa NBRC
100340]
Length = 561
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 54 VSSESFTLLRFADELKKARKLGTLKQYI--------VGRSSATTFADTFEKQEAVLRCLG 105
+ E FT F ++ +K+G+LKQ + + A+ F++ EA++R +
Sbjct: 341 MEEEDFTFDDFLQQMSAIKKMGSLKQLLGMMPGMNQMREQLASLDEREFDRVEAMVRSMT 400
Query: 106 AFDPNG-ENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEK 152
F+ N + + S++ A+ T++EV L +F A++ +++ +
Sbjct: 401 PFERNHPKQINGSRRARIARGSGVTVSEVNQLLERFGQAQKMMRQLRR 448
>gi|401841304|gb|EJT43712.1| CLU1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1277
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 37/187 (19%)
Query: 11 YHNHHLTLSQY---RSIFTTRTLQGSWMDSIK--GVFTGKKSSSEDGSVSSESF------ 59
Y N T S+Y +++ ++ W D ++ GV K + S + +++
Sbjct: 600 YDNVEATDSRYPHRQTLLRPELVEKWWNDKVEKEGVEFDKAYEENEFSYNPDAYQVEGIE 659
Query: 60 --TLLRFADELKKARKLGTLKQYIVGRSSATT----FADTFEKQEAVLRCLGAFDPNGEN 113
T+ ++ L+K G ++ Y+ G S ADT K +R LG
Sbjct: 660 DCTVDEMSNYLQKEVIPGVIQDYLSGNLSTPYNGEHLADTLHKNGINMRYLGKI------ 713
Query: 114 LQVSQKQ------------EAAKQCNCTIAEVENT-LAKFT-WAKEAQKKIEKLKEEGKP 159
+++SQKQ +A +Q N E E + L K KE Q K+ KL +EGK
Sbjct: 714 IELSQKQLDSQTAKYEENLKAVEQGNKEYEEWEKSYLQKIEKMIKERQAKVNKLVQEGKE 773
Query: 160 MPKSMAE 166
+PK + E
Sbjct: 774 VPKELTE 780
>gi|239627542|ref|ZP_04670573.1| Hsp33 protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517688|gb|EEQ57554.1| Hsp33 protein [Clostridiales bacterium 1_7_47FAA]
Length = 292
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 85 SSATTFADTFEKQEAVLR-CLGAFDPNGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWA 143
SS TT D E +L LG F L+++ + CNCT + VE L
Sbjct: 200 SSITTLLDVGNTPERILEYILGEF-----GLEINDRTPVQFYCNCTKSRVEKALISV--- 251
Query: 144 KEAQKKIEKLKEEGKPM 160
+K I+++ E+GKP+
Sbjct: 252 --GKKDIQEMIEDGKPI 266
>gi|387927062|ref|ZP_10129741.1| signal recognition particle protein [Bacillus methanolicus PB1]
gi|387589206|gb|EIJ81526.1| signal recognition particle protein [Bacillus methanolicus PB1]
Length = 450
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 54 VSSESFTLLRFADELKKARKLGTLKQY---------IVGRSSATTFADTFEKQEAVLRCL 104
+ + SFTL F ++L + RK+G L + I G ++ T EA+++ +
Sbjct: 324 IRTASFTLDDFLEQLGQVRKMGPLDELLKMMPGANKIKGLNNLTIDEKQIAHVEAIIKSM 383
Query: 105 GAFDP-NGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGK 158
+ + E + S+++ AK TI EV L +F K+ K++ ++++GK
Sbjct: 384 TKEEKIHPEIINASRRKRIAKGSGTTIQEVNRLLKQFEDMKKMMKQMAGMQQKGK 438
>gi|415886545|ref|ZP_11548325.1| Signal recognition particle GTPase [Bacillus methanolicus MGA3]
gi|387587232|gb|EIJ79555.1| Signal recognition particle GTPase [Bacillus methanolicus MGA3]
Length = 450
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 58 SFTLLRFADELKKARKLGTLKQY---------IVGRSSATTFADTFEKQEAVLRCLGAFD 108
SFTL F ++L + RK+G L++ I G ++ T EA+++ + +
Sbjct: 328 SFTLDDFLEQLGQVRKMGPLEELLKMMPGANKIKGLNNLTIDEKQIAHVEAIIKSMTKEE 387
Query: 109 P-NGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKKIEKLKEEGK 158
+ E + S+++ AK TI EV L +F K+ K++ ++++GK
Sbjct: 388 KIHPEIINASRRKRIAKGSGTTIQEVNRLLKQFEEMKKMMKQMTGMQQKGK 438
>gi|405980144|ref|ZP_11038484.1| ornithine carbamoyltransferase [Actinomyces turicensis
ACS-279-V-Col4]
gi|404390596|gb|EJZ85663.1| ornithine carbamoyltransferase [Actinomyces turicensis
ACS-279-V-Col4]
Length = 332
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 56 SESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLRC---LGAFDPNGE 112
+E +L+ A ELK A+K GT Q++ GR+ A FEK RC + AFD
Sbjct: 19 AEWLSLIDLAAELKAAKKNGTEVQHLKGRNIAL----IFEKTSTRTRCSFEVAAFDQGAH 74
Query: 113 N--LQVSQKQEAAKQCNCTIAEVENTL-AKFTWAKEAQKKIEKLKE-EGKPM 160
L S Q K+ A V + + + Q+K+E L E G P+
Sbjct: 75 TTYLDPSGSQMGHKESTADTARVLGRMFDGIEYRGDEQEKVEVLSELSGVPV 126
>gi|293374741|ref|ZP_06621049.1| signal recognition particle protein [Turicibacter sanguinis PC909]
gi|325837601|ref|ZP_08166448.1| signal recognition particle protein [Turicibacter sp. HGF1]
gi|292646655|gb|EFF64657.1| signal recognition particle protein [Turicibacter sanguinis PC909]
gi|325490903|gb|EGC93202.1| signal recognition particle protein [Turicibacter sp. HGF1]
Length = 475
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 64 FADELKKARKLGTLKQYI-----VGRSSATTFADT--FEKQEAVLRCLGAFD-PNGENLQ 115
F ++K+ +KLG + + VG D + EA++ + + N + +
Sbjct: 334 FLKQMKQMKKLGAFEDILKMIPGVGNQLKDINIDPKQMARVEAIIYSMTEQERKNPDLIN 393
Query: 116 VSQKQEAAKQCNCTIAEVENTLAKFTWAKEAQKK 149
S+KQ AK C C IAEV + +FT ++ KK
Sbjct: 394 ASRKQRIAKGCGCDIAEVNRMIKQFTDMRKMMKK 427
>gi|348684449|gb|EGZ24264.1| hypothetical protein PHYSODRAFT_353940 [Phytophthora sojae]
Length = 190
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 45 KKSSSEDGSVSSESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADTFEKQEAVLRCL 104
KK S DGS SSE+ L + +R+ + +Q + RS A A +E +L C+
Sbjct: 56 KKRRSADGSSSSETVQALHILVKHSGSRRPSSWRQETITRSKAVAEAKAGGIREKLLACV 115
Query: 105 GA-FDPNGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAK 144
A D + E L+ ++ A ++ +C+ A+ L FT K
Sbjct: 116 EANPDRSSEALRELFEEIAKEESDCSSAKRGGDLGPFTRGK 156
>gi|407983103|ref|ZP_11163764.1| signal recognition particle protein [Mycobacterium hassiacum DSM
44199]
gi|407375386|gb|EKF24341.1| signal recognition particle protein [Mycobacterium hassiacum DSM
44199]
Length = 515
Score = 35.0 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Query: 35 MDSIKGVFTGKKSSSEDGSVSSESFTLLRFADELKKARKLGTLKQYIVGRSSATTFADTF 94
++ + VF KK+ + S TL F ++++ RK+G + + A D
Sbjct: 314 IEQAEQVFDAKKAEETAHKIGSGELTLEDFLEQMQAIRKMGPIANLLGMLPGANQMKDAL 373
Query: 95 ----EKQ----EAVLRCLGAFD-PNGENLQVSQKQEAAKQCNCTIAEVENTLAKFTWAKE 145
+KQ +A++R + + N + + S++Q AK T+ EV + +F A++
Sbjct: 374 AAVDDKQLDRIQAIIRGMTPEERANPKIIDASRRQRIAKGSGVTVGEVNQLVERFFEARK 433
Query: 146 AQKKI 150
++
Sbjct: 434 MMSQM 438
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.127 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,282,222,069
Number of Sequences: 23463169
Number of extensions: 77485809
Number of successful extensions: 267031
Number of sequences better than 100.0: 140
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 266961
Number of HSP's gapped (non-prelim): 146
length of query: 170
length of database: 8,064,228,071
effective HSP length: 130
effective length of query: 40
effective length of database: 9,308,983,397
effective search space: 372359335880
effective search space used: 372359335880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)