BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030889
(169 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255552111|ref|XP_002517100.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223543735|gb|EEF45263.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 202
Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 157/167 (94%), Positives = 163/167 (97%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDSHKLIAASGEPGDRVQFTE+IQKNVSLYQFRNGIPL+TAAAANFTRGELATALRK+
Sbjct: 36 MVLDSHKLIAASGEPGDRVQFTEYIQKNVSLYQFRNGIPLSTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNILLAGYDKETGPSLYYIDYIATLHKVDK AFGYGSYFSL+MMDRHFHSGMSVEEA
Sbjct: 96 PYSVNILLAGYDKETGPSLYYIDYIATLHKVDKGAFGYGSYFSLAMMDRHFHSGMSVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVS 167
+DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD P +
Sbjct: 156 IDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDVPAA 202
>gi|351726646|ref|NP_001235342.1| uncharacterized protein LOC100499738 [Glycine max]
gi|255626205|gb|ACU13447.1| unknown [Glycine max]
Length = 204
Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 156/169 (92%), Positives = 165/169 (97%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M+LDSHKLIAASGEPGDRVQFTE+IQKNV+LYQFRNGIPLTTAAAANFTRGELATALRK+
Sbjct: 36 MLLDSHKLIAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNILLAGYDKETGP LYYIDYIATLHK++K AFGYGSYFSLSMMDRH+HSGMSVEEA
Sbjct: 96 PYSVNILLAGYDKETGPELYYIDYIATLHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 169
+DLVDKCI+EIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPV SA
Sbjct: 156 IDLVDKCIMEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVPSA 204
>gi|357480975|ref|XP_003610773.1| Proteasome subunit beta type [Medicago truncatula]
gi|355512108|gb|AES93731.1| Proteasome subunit beta type [Medicago truncatula]
Length = 203
Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 156/168 (92%), Positives = 164/168 (97%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M LDSHKLIAASGEPGDRVQFTE+IQKNV+LYQFRNGIPLTTAAAANFTRGELATALRK+
Sbjct: 36 MFLDSHKLIAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNILLAGYDKETGPSLYYIDYIATLHK++K AFGYGSYFSLSMMDRHFHSGM+VEEA
Sbjct: 96 PYSVNILLAGYDKETGPSLYYIDYIATLHKLEKGAFGYGSYFSLSMMDRHFHSGMNVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSS 168
+DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTP S+
Sbjct: 156 IDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPASA 203
>gi|351721168|ref|NP_001238480.1| uncharacterized protein LOC100306158 [Glycine max]
gi|255627727|gb|ACU14208.1| unknown [Glycine max]
Length = 204
Score = 331 bits (849), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 156/169 (92%), Positives = 164/169 (97%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M+LDSHKLIAASGEPGDRVQFTE+IQKNV+LYQFRNGIPLTTAAAANFTRGELATALRK+
Sbjct: 36 MLLDSHKLIAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNILLAGYDKETGP LYYIDYIATLHK++K AFGYGSYFSLSMMDRH+HSGMSVEEA
Sbjct: 96 PYSVNILLAGYDKETGPELYYIDYIATLHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 169
VDLVDKCI+EIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD PV SA
Sbjct: 156 VDLVDKCIMEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDVPVPSA 204
>gi|388513771|gb|AFK44947.1| unknown [Medicago truncatula]
Length = 203
Score = 331 bits (848), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 155/168 (92%), Positives = 163/168 (97%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M LDSHKLIAASGEPGDRVQFTE+IQKNV+LYQFRNGIPLTT AAANFTRGELATALRK+
Sbjct: 36 MFLDSHKLIAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTTAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNILLAGYDKETGPSLYYIDYIATLHK++K AFGYGSYFSLSMMDRHFHSGM+VEEA
Sbjct: 96 PYSVNILLAGYDKETGPSLYYIDYIATLHKLEKGAFGYGSYFSLSMMDRHFHSGMNVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSS 168
+DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTP S+
Sbjct: 156 IDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPASA 203
>gi|357482027|ref|XP_003611299.1| Proteasome subunit beta type [Medicago truncatula]
gi|217071348|gb|ACJ84034.1| unknown [Medicago truncatula]
gi|355512634|gb|AES94257.1| Proteasome subunit beta type [Medicago truncatula]
gi|388503658|gb|AFK39895.1| unknown [Medicago truncatula]
gi|388515713|gb|AFK45918.1| unknown [Medicago truncatula]
Length = 204
Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 154/169 (91%), Positives = 163/169 (96%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M LDSHKL+AASGEPGDRVQFTE+IQKNV+LYQFRNGIPLTTAAAANFTRGELATALRK+
Sbjct: 36 MFLDSHKLVAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNILLAGYDKETGPSLYYIDYIATLHK++K AFGYGSYFSLSMMDRH+HSGMSVEEA
Sbjct: 96 PYSVNILLAGYDKETGPSLYYIDYIATLHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 169
+DLVDKCI EIRSRLVVAPPNFVIKIVDKDGAREYAWR+SV DTPV SA
Sbjct: 156 IDLVDKCIAEIRSRLVVAPPNFVIKIVDKDGAREYAWRQSVNDTPVPSA 204
>gi|224107999|ref|XP_002314682.1| predicted protein [Populus trichocarpa]
gi|118489001|gb|ABK96308.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222863722|gb|EEF00853.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 151/168 (89%), Positives = 161/168 (95%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M LDSHKL+AASGE GDRVQFTE+IQKNV+LYQFRNGIPLTTAAAANFTRGELATALRK+
Sbjct: 36 MKLDSHKLVAASGESGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PYMVNILLAGYDKETGPSLYYIDYIATLHKVD+ AFGYGSYF LSMMDRH+HSGMSVEEA
Sbjct: 96 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDRGAFGYGSYFCLSMMDRHYHSGMSVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSS 168
V+LVDKCI EI+SRLVVAPPNFVIKIVD+DGAREYAWRESVKDTP +
Sbjct: 156 VELVDKCITEIQSRLVVAPPNFVIKIVDRDGAREYAWRESVKDTPTAQ 203
>gi|224112951|ref|XP_002332670.1| predicted protein [Populus trichocarpa]
gi|118483095|gb|ABK93457.1| unknown [Populus trichocarpa]
gi|222836464|gb|EEE74871.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 150/169 (88%), Positives = 162/169 (95%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M LDSHKLIAASGE GDRVQFTE+IQKNV+LY FRNGIPLTTAAAANFTRGELATALRK+
Sbjct: 36 MKLDSHKLIAASGESGDRVQFTEYIQKNVALYHFRNGIPLTTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PYMVNILLAG+D+ETGPSLYYIDYIATLHKVDK AFGYGS+F LSMMDRH+HSGMSVEEA
Sbjct: 96 PYMVNILLAGFDRETGPSLYYIDYIATLHKVDKGAFGYGSFFCLSMMDRHYHSGMSVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 169
V+LVDKCI+EIRSRLVVAPPNFVIKIVD+DGAREYAWRESVKDTP + +
Sbjct: 156 VELVDKCIMEIRSRLVVAPPNFVIKIVDRDGAREYAWRESVKDTPTAQS 204
>gi|449433303|ref|XP_004134437.1| PREDICTED: vicilin-like antimicrobial peptides 2-1-like [Cucumis
sativus]
Length = 863
Score = 317 bits (813), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 146/163 (89%), Positives = 158/163 (96%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDSHKL+AASGEPGDRVQFTE+IQKNV+LYQFRNGIPLTTAAAANFTR ELATALRK+
Sbjct: 694 MVLDSHKLVAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRSELATALRKN 753
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNILLAGYDKETGPSLYY+DYIATLHKV+K AFGYGSYFSL+MMDRH+HSGM+ EEA
Sbjct: 754 PYSVNILLAGYDKETGPSLYYVDYIATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEEEA 813
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
+DLVDKCILEIRSRLVVAPPNFVIKIVDK+GARE AWRES+KD
Sbjct: 814 IDLVDKCILEIRSRLVVAPPNFVIKIVDKNGAREVAWRESIKD 856
>gi|449513412|ref|XP_004164319.1| PREDICTED: proteasome subunit beta type-2-A-like isoform 1 [Cucumis
sativus]
gi|449513415|ref|XP_004164320.1| PREDICTED: proteasome subunit beta type-2-A-like isoform 2 [Cucumis
sativus]
Length = 205
Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 146/163 (89%), Positives = 158/163 (96%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDSHKL+AASGEPGDRVQFTE+IQKNV+LYQFRNGIPLTTAAAANFTR ELATALRK+
Sbjct: 36 MVLDSHKLVAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRSELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNILLAGYDKETGPSLYY+DYIATLHKV+K AFGYGSYFSL+MMDRH+HSGM+ EEA
Sbjct: 96 PYSVNILLAGYDKETGPSLYYVDYIATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
+DLVDKCILEIRSRLVVAPPNFVIKIVDK+GARE AWRES+KD
Sbjct: 156 IDLVDKCILEIRSRLVVAPPNFVIKIVDKNGAREVAWRESIKD 198
>gi|359479647|ref|XP_003632316.1| PREDICTED: proteasome subunit beta type-2-A-like [Vitis vinifera]
gi|147843860|emb|CAN79443.1| hypothetical protein VITISV_006154 [Vitis vinifera]
Length = 205
Score = 315 bits (806), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 145/164 (88%), Positives = 158/164 (96%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDSHKL+ ASGE GDR QFTE+IQKNV+LYQFRNGIPLTTAAAANFTRGELATALRK+
Sbjct: 36 MVLDSHKLLGASGEGGDRAQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNILLAGYDK+ GPSLYYIDYIA+LHK++K AFGYGSYFSL+MMDRH+HSGM+VEEA
Sbjct: 96 PYAVNILLAGYDKDIGPSLYYIDYIASLHKIEKGAFGYGSYFSLAMMDRHYHSGMTVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDT 164
VDLVDKCI+EIRSRLVVAPPNFVIKIVDKDGAREYAWRES+KDT
Sbjct: 156 VDLVDKCIMEIRSRLVVAPPNFVIKIVDKDGAREYAWRESIKDT 199
>gi|296085223|emb|CBI28718.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 314 bits (804), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 145/164 (88%), Positives = 158/164 (96%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDSHKL+ ASGE GDR QFTE+IQKNV+LYQFRNGIPLTTAAAANFTRGELATALRK+
Sbjct: 1 MVLDSHKLLGASGEGGDRAQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALRKN 60
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNILLAGYDK+ GPSLYYIDYIA+LHK++K AFGYGSYFSL+MMDRH+HSGM+VEEA
Sbjct: 61 PYAVNILLAGYDKDIGPSLYYIDYIASLHKIEKGAFGYGSYFSLAMMDRHYHSGMTVEEA 120
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDT 164
VDLVDKCI+EIRSRLVVAPPNFVIKIVDKDGAREYAWRES+KDT
Sbjct: 121 VDLVDKCIMEIRSRLVVAPPNFVIKIVDKDGAREYAWRESIKDT 164
>gi|297835264|ref|XP_002885514.1| hypothetical protein ARALYDRAFT_898737 [Arabidopsis lyrata subsp.
lyrata]
gi|297331354|gb|EFH61773.1| hypothetical protein ARALYDRAFT_898737 [Arabidopsis lyrata subsp.
lyrata]
Length = 204
Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 144/168 (85%), Positives = 158/168 (94%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDSHKL+AASGEPGDRVQFTE++QKNVSLY+FRNGIPLTTAAAANFTRGELATALRK+
Sbjct: 36 MVLDSHKLVAASGEPGDRVQFTEYVQKNVSLYKFRNGIPLTTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNIL+AGYD E+G SLYYIDYIATLHKVDK AFGYGSYFSLS MDRH+ S MSVEEA
Sbjct: 96 PYSVNILMAGYDNESGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSS 168
++LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR+YAWR+SVKD ++
Sbjct: 156 IELVDKCILEIRSRLVVAPPNFVIKIVDKDGARDYAWRQSVKDVTTAA 203
>gi|15228805|ref|NP_188902.1| proteasome subunit beta type-2-A [Arabidopsis thaliana]
gi|17380179|sp|O23714.1|PSB2A_ARATH RecName: Full=Proteasome subunit beta type-2-A; AltName: Full=20S
proteasome beta subunit D-1; AltName: Full=Proteasome
component GB; AltName: Full=Proteasome subunit beta
type-4
gi|2511590|emb|CAA74026.1| multicatalytic endopeptidase complex, proteasome component, beta
subunit [Arabidopsis thaliana]
gi|3421111|gb|AAC32070.1| 20S proteasome beta subunit PBD1 [Arabidopsis thaliana]
gi|11994294|dbj|BAB01477.1| multicatalytic endopeptidase complex, proteasome component, beta
subunit [Arabidopsis thaliana]
gi|15529250|gb|AAK97719.1| AT3g22630/F16J14_20 [Arabidopsis thaliana]
gi|23505793|gb|AAN28756.1| At3g22630/F16J14_20 [Arabidopsis thaliana]
gi|332643138|gb|AEE76659.1| proteasome subunit beta type-2-A [Arabidopsis thaliana]
Length = 204
Score = 309 bits (792), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/167 (86%), Positives = 157/167 (94%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDSHKL+AASGEPGDRVQFTE++QKNVSLY+FRNGIPLTTAAAANFTRGELATALRK+
Sbjct: 36 MVLDSHKLVAASGEPGDRVQFTEYVQKNVSLYKFRNGIPLTTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNIL+AGYD E+G SLYYIDYIATLHKVDK AFGYGSYFSLS MDRH+ S MSVEEA
Sbjct: 96 PYSVNILMAGYDDESGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVS 167
++LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR+YAWR+SVKD +
Sbjct: 156 IELVDKCILEIRSRLVVAPPNFVIKIVDKDGARDYAWRQSVKDVTTA 202
>gi|346470417|gb|AEO35053.1| hypothetical protein [Amblyomma maculatum]
Length = 200
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/164 (85%), Positives = 155/164 (94%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDSHKL+ ASGE GDRVQFTE+IQKNV LYQFRNGIPLTTAAAANFTR ELATALRK+
Sbjct: 36 MVLDSHKLLGASGEGGDRVQFTEYIQKNVHLYQFRNGIPLTTAAAANFTRNELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VN+LLAGYDK+ GPSLYYIDYIATLHK+DK AFGYGSYFSL+MMDRH+H+GMS+EEA
Sbjct: 96 PYQVNVLLAGYDKDIGPSLYYIDYIATLHKIDKGAFGYGSYFSLAMMDRHYHNGMSLEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDT 164
VDL DKCI+EIRSRLVVAPPNFVIKIVDKDGAR+YA RE++KDT
Sbjct: 156 VDLADKCIMEIRSRLVVAPPNFVIKIVDKDGARQYAMRETIKDT 199
>gi|15233580|ref|NP_193216.1| proteasome subunit beta type-2-B [Arabidopsis thaliana]
gi|17380180|sp|O24633.1|PSB2B_ARATH RecName: Full=Proteasome subunit beta type-2-B; AltName: Full=20S
proteasome beta subunit D-2; AltName: Full=Proteasome
component GA; AltName: Full=Proteasome subunit beta
type-4
gi|2244837|emb|CAB10259.1| proteasome chain protein [Arabidopsis thaliana]
gi|2511572|emb|CAA73618.1| multicatalytic endopeptidase [Arabidopsis thaliana]
gi|3421114|gb|AAC32071.1| 20S proteasome beta subunit PBD2 [Arabidopsis thaliana]
gi|7268226|emb|CAB78522.1| proteasome chain protein [Arabidopsis thaliana]
gi|21592467|gb|AAM64418.1| proteasome chain protein [Arabidopsis thaliana]
gi|88193794|gb|ABD42986.1| At4g14800 [Arabidopsis thaliana]
gi|110735665|dbj|BAE99813.1| proteasome chain protein [Arabidopsis thaliana]
gi|332658100|gb|AEE83500.1| proteasome subunit beta type-2-B [Arabidopsis thaliana]
Length = 199
Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 141/163 (86%), Positives = 151/163 (92%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M LDSHKL+AASGEPGDRVQFTE++QKNVSLYQFRNGIPL+TAAAANFTRGELATALRK+
Sbjct: 36 MTLDSHKLVAASGEPGDRVQFTEYVQKNVSLYQFRNGIPLSTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNIL+AGYDKE G SLYYIDYIATLHKVDK AFGYGSYFSLS MDRH+ S MSVEEA
Sbjct: 96 PYSVNILMAGYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
++LVDKCILEIRSRLV+APPNFVIKIVDKDGAREY WR S D
Sbjct: 156 IELVDKCILEIRSRLVIAPPNFVIKIVDKDGAREYGWRISTAD 198
>gi|297804794|ref|XP_002870281.1| hypothetical protein ARALYDRAFT_493416 [Arabidopsis lyrata subsp.
lyrata]
gi|297316117|gb|EFH46540.1| hypothetical protein ARALYDRAFT_493416 [Arabidopsis lyrata subsp.
lyrata]
Length = 199
Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 140/163 (85%), Positives = 152/163 (93%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDSHKL+AASGEPGDRVQFTE++QKNVSLYQFRNG+PLTTAAAANFTRGELATALRK+
Sbjct: 36 MVLDSHKLVAASGEPGDRVQFTEYVQKNVSLYQFRNGLPLTTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNIL+AGYDKE G SLYYIDYIATLHKVDK AFGYGSYFSLS MDRH+ S MSVEEA
Sbjct: 96 PYSVNILMAGYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
++LVDKCILEIRSRLV+APPNFVIKIVDK+GAREY WR + D
Sbjct: 156 IELVDKCILEIRSRLVIAPPNFVIKIVDKNGAREYDWRITTVD 198
>gi|116778950|gb|ABK21070.1| unknown [Picea sitchensis]
Length = 215
Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 133/163 (81%), Positives = 152/163 (93%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M+LDSHKL+ ASGE GDRVQFTE+IQKNV LYQFRNGIPL+TAA ANFTRGELATALRK+
Sbjct: 36 MILDSHKLLGASGESGDRVQFTEYIQKNVHLYQFRNGIPLSTAATANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VN+LLAG+DK+ GPSLYYIDYIATLHKVDK AFGYG+YF+LSMMDR++H GMSVEEA
Sbjct: 96 PYSVNLLLAGFDKDVGPSLYYIDYIATLHKVDKVAFGYGAYFALSMMDRYYHKGMSVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
++ DKCILEIRSRL+VAPPNFVIKIVDKDGAREY WR++++D
Sbjct: 156 IEFADKCILEIRSRLIVAPPNFVIKIVDKDGAREYGWRKTIED 198
>gi|334186535|ref|NP_001190731.1| proteasome subunit beta type-2-B [Arabidopsis thaliana]
gi|332658101|gb|AEE83501.1| proteasome subunit beta type-2-B [Arabidopsis thaliana]
Length = 215
Score = 292 bits (747), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/179 (78%), Positives = 151/179 (84%), Gaps = 16/179 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRK- 59
M LDSHKL+AASGEPGDRVQFTE++QKNVSLYQFRNGIPL+TAAAANFTRGELATALRK
Sbjct: 36 MTLDSHKLVAASGEPGDRVQFTEYVQKNVSLYQFRNGIPLSTAAAANFTRGELATALRKE 95
Query: 60 ---------------SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSL 104
+PY VNIL+AGYDKE G SLYYIDYIATLHKVDK AFGYGSYFSL
Sbjct: 96 FCATFQGYSDFCVLMNPYSVNILMAGYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSL 155
Query: 105 SMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
S MDRH+ S MSVEEA++LVDKCILEIRSRLV+APPNFVIKIVDKDGAREY WR S D
Sbjct: 156 STMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIKIVDKDGAREYGWRISTAD 214
>gi|242033305|ref|XP_002464047.1| hypothetical protein SORBIDRAFT_01g011260 [Sorghum bicolor]
gi|241917901|gb|EER91045.1| hypothetical protein SORBIDRAFT_01g011260 [Sorghum bicolor]
Length = 210
Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/170 (80%), Positives = 149/170 (87%), Gaps = 1/170 (0%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDSHKL+ ASGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAAAANFTRGELATALRK+
Sbjct: 36 MVLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PYMVNI+L GYDK+ G SLYYIDYIATLHK+DK AFGYGSYF LS+MD+ + M+VEEA
Sbjct: 96 PYMVNIILGGYDKDVGASLYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDT-PVSSA 169
VDLVDKCI EIR RLVVAP NFVIKIVDKDGAREYA RE V D PV +A
Sbjct: 156 VDLVDKCIKEIRLRLVVAPQNFVIKIVDKDGAREYARRELVGDNAPVDAA 205
>gi|162458463|ref|NP_001105922.1| putative beta 4 proteasome subunit [Zea mays]
gi|53771821|gb|AAU93515.1| putative beta 4 proteasome subunit [Zea mays]
Length = 210
Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/164 (81%), Positives = 146/164 (89%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDS KL+ ASGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAAAANFTRGELATALRK+
Sbjct: 36 MVLDSQKLMGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PYMVNI+L GYDK+ G SLYYIDYIATLHK+DK AFGYGSYF LS+MD+ +H M+VEEA
Sbjct: 96 PYMVNIILGGYDKDVGASLYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDT 164
VDLVDKCI EIR RLVVAP NFVIKIVDKDGAREYA RE V D+
Sbjct: 156 VDLVDKCIKEIRLRLVVAPQNFVIKIVDKDGAREYARRELVGDS 199
>gi|224029691|gb|ACN33921.1| unknown [Zea mays]
gi|414872238|tpg|DAA50795.1| TPA: proteasome subunit beta type [Zea mays]
Length = 211
Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 134/164 (81%), Positives = 145/164 (88%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDS KL+ ASGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAAAANFTRGELATALRK+
Sbjct: 36 MVLDSQKLMGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PYMVNI+L GYDK+ G SLYYIDYIATLHK+DK AFGYGSYF LS+MD+ +H M+VEEA
Sbjct: 96 PYMVNIILGGYDKDVGASLYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDT 164
VDLVDKCI EIR RLVVAP NFVIKIVDKDGAREYA RE V D
Sbjct: 156 VDLVDKCIKEIRLRLVVAPQNFVIKIVDKDGAREYARRELVGDN 199
>gi|226502282|ref|NP_001148542.1| LOC100282158 [Zea mays]
gi|195620210|gb|ACG31935.1| proteasome subunit beta type 2 [Zea mays]
Length = 211
Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 134/164 (81%), Positives = 145/164 (88%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDS KL+ ASGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAAAANFTRGELATALRK+
Sbjct: 36 MVLDSQKLMGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PYMVNI+L GYDK+ G SLYYIDYIATLHK+DK AFGYGSYF LS+MD+ +H M+VEEA
Sbjct: 96 PYMVNIILGGYDKDVGASLYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDT 164
VDLVDKCI EIR RLVVAP NFVIKIVDKDGAREYA RE V D
Sbjct: 156 VDLVDKCIKEIRLRLVVAPQNFVIKIVDKDGAREYARRELVGDN 199
>gi|226532014|ref|NP_001148490.1| proteasome component2 [Zea mays]
gi|195605760|gb|ACG24710.1| proteasome subunit beta type 2 [Zea mays]
gi|195619760|gb|ACG31710.1| proteasome subunit beta type 2 [Zea mays]
gi|223947157|gb|ACN27662.1| unknown [Zea mays]
gi|413933376|gb|AFW67927.1| proteasome subunit beta type [Zea mays]
Length = 210
Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 133/164 (81%), Positives = 146/164 (89%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDSHKL+ ASGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAAAANFTRGELATALRK+
Sbjct: 36 MVLDSHKLLGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PYMVN++L GYDK+ G SLYYIDYIATLHK+DK AFGYGSYF LS+MD+ + M+VEEA
Sbjct: 96 PYMVNVILGGYDKDVGASLYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDT 164
VDLVDKCI EIR RLVVAP NFVIKIVDKDGAREYA RE V D+
Sbjct: 156 VDLVDKCIKEIRLRLVVAPQNFVIKIVDKDGAREYARRELVGDS 199
>gi|357118526|ref|XP_003561005.1| PREDICTED: proteasome subunit beta type-2-like [Brachypodium
distachyon]
Length = 209
Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 127/168 (75%), Positives = 144/168 (85%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M+LDSHKL+ ASGEPGDRVQFTEFIQKN+ LYQFRN +PL+TAA ANFTRGELATALRK+
Sbjct: 36 MLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNMPLSTAATANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNI+LAG+D++ G S+YYIDYIATLHK+DK AFGYGSYF LS+MD+ + M+VEEA
Sbjct: 96 PYSVNIILAGFDEDVGASMYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSS 168
VDLVDKCI EIR RLVVAP NF IKIVDKDGAR+Y RESV P S
Sbjct: 156 VDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARDYGKRESVSGNPSES 203
>gi|52548238|gb|AAU82106.1| 20S proteasome beta 4 subunit [Triticum aestivum]
Length = 213
Score = 271 bits (693), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 127/165 (76%), Positives = 144/165 (87%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M+LDSHKL+ ASGEPGDRVQFTEFIQKN+ LYQFRN +PL+TAA ANFTRGELATALRK+
Sbjct: 36 MLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNMPLSTAATANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNI+LAG+DK+ G S+YYIDYIATLHK+DK AFGYGSYF LS+MD+ + M+VEEA
Sbjct: 96 PYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTP 165
VDLVDKCI EIR RLVVAP NF IKIVDKDGAR+YA RE D+P
Sbjct: 156 VDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARDYARREIGGDSP 200
>gi|8671508|dbj|BAA96837.1| beta 4 subunit of 20S proteasome [Oryza sativa Japonica Group]
Length = 212
Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/169 (76%), Positives = 145/169 (85%), Gaps = 1/169 (0%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDSHKL+ ASGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAA ANFTRGELATALRK+
Sbjct: 36 MVLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNIPLSTAATANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VN+LLAGYD + G SLYYIDYIAT HK++K AFGYGSYF LS+MD+ + MSVEEA
Sbjct: 96 PYYVNVLLAGYDSDVGASLYYIDYIATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 169
VDLVDKCI EIR RLVVAP NF+IKIVDK+GAREYA R + D+P +A
Sbjct: 156 VDLVDKCIKEIRLRLVVAPQNFIIKIVDKEGAREYA-RRAYTDSPPEAA 203
>gi|115454751|ref|NP_001050976.1| Os03g0695600 [Oryza sativa Japonica Group]
gi|109940125|sp|Q9LST6.2|PSB2_ORYSJ RecName: Full=Proteasome subunit beta type-2; AltName: Full=20S
proteasome alpha subunit D; AltName: Full=20S proteasome
subunit beta-4
gi|27552546|gb|AAO19369.1| 20S proteasome beta 4 subunit [Oryza sativa Japonica Group]
gi|108710548|gb|ABF98343.1| Proteasome subunit beta type 2, putative, expressed [Oryza sativa
Japonica Group]
gi|113549447|dbj|BAF12890.1| Os03g0695600 [Oryza sativa Japonica Group]
gi|125545359|gb|EAY91498.1| hypothetical protein OsI_13132 [Oryza sativa Indica Group]
gi|125587570|gb|EAZ28234.1| hypothetical protein OsJ_12208 [Oryza sativa Japonica Group]
gi|149390831|gb|ABR25433.1| 20S proteasome beta subunit d2 [Oryza sativa Indica Group]
gi|215692385|dbj|BAG87805.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708673|dbj|BAG93942.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 212
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/169 (76%), Positives = 145/169 (85%), Gaps = 1/169 (0%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDSHKL+ ASGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAA ANFTRGELATALRK+
Sbjct: 36 MVLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNIPLSTAATANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VN+LLAGYD + G SLYYIDYIAT HK++K AFGYGSYF LS+MD+ + MSVEEA
Sbjct: 96 PYYVNVLLAGYDSDVGASLYYIDYIATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 169
VDLVDKCI EIR RLVVAP NF+IKIVDK+GAREYA R + D+P +A
Sbjct: 156 VDLVDKCIKEIRLRLVVAPQNFIIKIVDKEGAREYA-RRAYTDSPPEAA 203
>gi|168016366|ref|XP_001760720.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688080|gb|EDQ74459.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 118/172 (68%), Positives = 150/172 (87%), Gaps = 3/172 (1%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M+LDSHKL+ +GE GDRVQF+E+IQKN+ LYQ+RNGIPL+TAAAANFTRGELATALRKS
Sbjct: 36 MILDSHKLLGVTGESGDRVQFSEYIQKNILLYQYRNGIPLSTAAAANFTRGELATALRKS 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VN+++AG++K+ GPSLYY+DYI+TLHK++K GYG+YF LS+MDR++ MS+E+A
Sbjct: 96 PYQVNMMIAGWEKDQGPSLYYLDYISTLHKLEKGGMGYGAYFLLSLMDRYYEKNMSLEKA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDT---PVSSA 169
++LVDKCI E+RSRLV +PPNF++KIVDKDGARE AWR +V+D P SSA
Sbjct: 156 LELVDKCIKEVRSRLVASPPNFIVKIVDKDGARELAWRRTVEDQQGPPSSSA 207
>gi|168018248|ref|XP_001761658.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687029|gb|EDQ73414.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 264 bits (675), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 118/171 (69%), Positives = 150/171 (87%), Gaps = 2/171 (1%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M+LDSHKL+ +GE GDRVQF+E+IQKN+ LYQ+RNGIPL+T+AAANFTRGELATALRK+
Sbjct: 36 MILDSHKLLGVTGESGDRVQFSEYIQKNILLYQYRNGIPLSTSAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VN+++AG+DK+ GPSLYY+DYI+TLHKV+K GYG+YF LS+MDR++ MS+E+A
Sbjct: 96 PYEVNMMIAGWDKDQGPSLYYLDYISTLHKVEKGGMGYGAYFLLSLMDRYYEKNMSLEKA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDT--PVSSA 169
++LVD CI E+RSRLVV+PPNF+IKIVDKDGARE AWR +V+D P S+A
Sbjct: 156 LELVDMCIEEVRSRLVVSPPNFIIKIVDKDGARELAWRRTVEDKQGPPSAA 206
>gi|302757719|ref|XP_002962283.1| hypothetical protein SELMODRAFT_165201 [Selaginella moellendorffii]
gi|302763553|ref|XP_002965198.1| hypothetical protein SELMODRAFT_406410 [Selaginella moellendorffii]
gi|300167431|gb|EFJ34036.1| hypothetical protein SELMODRAFT_406410 [Selaginella moellendorffii]
gi|300170942|gb|EFJ37543.1| hypothetical protein SELMODRAFT_165201 [Selaginella moellendorffii]
Length = 220
Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/156 (69%), Positives = 133/156 (85%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LDSHKL+A SGE GDRV F+E+IQKN++LY FRNGIPL+TAAAA+FTR ELA ALRK+PY
Sbjct: 38 LDSHKLMATSGEAGDRVIFSEYIQKNINLYNFRNGIPLSTAAAASFTRNELAVALRKNPY 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN++L G+DK GPSLY++DYIATLH+++K A GYGSYF LS+MD++F GMSVEE +
Sbjct: 98 YVNLMLGGFDKGKGPSLYFMDYIATLHQLEKGAVGYGSYFVLSVMDKYFRKGMSVEEGMA 157
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWR 158
L DKCI EIR RL+ +P +FV+KIVDKDGAR+ AWR
Sbjct: 158 LADKCIAEIRKRLIASPHSFVLKIVDKDGARDLAWR 193
>gi|168049085|ref|XP_001776995.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671696|gb|EDQ58244.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 130/157 (82%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP 61
LDSHKL+ GE GDRVQF+ FIQKN++LY FRNGIPL+T+AAA+FTR ELATALRK+P
Sbjct: 37 CLDSHKLLGCIGESGDRVQFSNFIQKNMNLYHFRNGIPLSTSAAASFTRCELATALRKAP 96
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y VN+++AGYDK TGP L+Y+DYIATL K++K A G+G+YF LS+ D+++ M+VEEA+
Sbjct: 97 YQVNMMMAGYDKRTGPCLFYLDYIATLQKLNKGAQGFGAYFILSLFDKYYQKNMNVEEAL 156
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWR 158
LVDKCI EI +R+V +P N+VIKIVD++GAR A R
Sbjct: 157 QLVDKCIWEIGTRMVASPANYVIKIVDRNGARLLARR 193
>gi|357450661|ref|XP_003595607.1| Proteasome subunit beta type [Medicago truncatula]
gi|355484655|gb|AES65858.1| Proteasome subunit beta type [Medicago truncatula]
Length = 108
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/109 (87%), Positives = 102/109 (93%), Gaps = 2/109 (1%)
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
+PY VNILLAGYDKETGPSLYYIDYIATLHK++K AFGYGSYFSL MMD+HFHSGM+VEE
Sbjct: 2 NPYSVNILLAGYDKETGPSLYYIDYIATLHKLEKGAFGYGSYFSLLMMDKHFHSGMNVEE 61
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSS 168
A+DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR AWRESVKDT S+
Sbjct: 62 AIDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR--AWRESVKDTHASA 108
>gi|384253589|gb|EIE27063.1| 20S proteasome beta subunit D, type 2 [Coccomyxa subellipsoidea
C-169]
Length = 198
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/151 (60%), Positives = 117/151 (77%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+DSHKL+ SGEPGDRVQF+EFI N LY R+ LTT A ANFTR ELATALRK PY
Sbjct: 38 IDSHKLMCLSGEPGDRVQFSEFIMANSRLYALRHERALTTKAVANFTRSELATALRKGPY 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
N+L+AG+D++ GPSLY++DY+AT+H ++ A GYGSYF LSMMDR + ++ EEAV+
Sbjct: 98 NTNLLIAGWDEKAGPSLYWMDYLATMHSMNVAGTGYGSYFVLSMMDRLWRPDLTQEEAVE 157
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
L++K I E++ RLVVAPP++VIKIVD G R
Sbjct: 158 LMEKGIQEVKRRLVVAPPSYVIKIVDSAGIR 188
>gi|302849887|ref|XP_002956472.1| hypothetical protein VOLCADRAFT_110015 [Volvox carteri f.
nagariensis]
gi|300258170|gb|EFJ42409.1| hypothetical protein VOLCADRAFT_110015 [Volvox carteri f.
nagariensis]
Length = 193
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 85/151 (56%), Positives = 117/151 (77%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D HK+ +GE GDRV F+E+I NV LY RNG L T + AN+TRGELATALR SPY
Sbjct: 38 IDDHKVFCIAGEAGDRVNFSEYIIANVKLYALRNGTELNTKSVANYTRGELATALRSSPY 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
N+LLAGYDKETGP+LY++DY+ATL KV+ GYGSYF++S+ D+ ++ ++V+EAV
Sbjct: 98 HCNLLLAGYDKETGPALYWLDYLATLSKVNTGGTGYGSYFTMSLFDKMWNPELTVDEAVA 157
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
++D I E++ RLVVAPP++++K++DKDG R
Sbjct: 158 MMDAGIAEVKKRLVVAPPHYIMKVIDKDGIR 188
>gi|14594929|emb|CAC43325.1| putative beta4 proteasome subunit [Nicotiana tabacum]
Length = 134
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/99 (87%), Positives = 95/99 (95%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M+LDSHKL+ ASGE GDR QFTE++QKNV+LYQFRNGIPLTTAAAANFTRGELATALRK+
Sbjct: 36 MILDSHKLMGASGEAGDRAQFTEYVQKNVALYQFRNGIPLTTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYG 99
PYMVNI+LAGYDKETGPSLYY+DYIATLHKVDK AFGYG
Sbjct: 96 PYMVNIILAGYDKETGPSLYYVDYIATLHKVDKGAFGYG 134
>gi|159481799|ref|XP_001698962.1| 20S proteasome beta subunit D, type 2 [Chlamydomonas reinhardtii]
gi|158273225|gb|EDO99016.1| 20S proteasome beta subunit D, type 2 [Chlamydomonas reinhardtii]
Length = 193
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 116/151 (76%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D HK+ +GE GDRV F+E+I NV LY RNG PL T + AN+TRGELATALR SPY
Sbjct: 38 IDDHKVFCIAGEAGDRVNFSEYIIANVKLYALRNGTPLNTKSVANYTRGELATALRSSPY 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
N+LLAG+D++ G SLY++DY+ATL+K++ GYGSYF+LS+ D+ +H ++V+EA
Sbjct: 98 HCNLLLAGWDEQAGASLYWMDYLATLNKINTGGTGYGSYFTLSLFDKMWHPNLTVDEATA 157
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+++ I E++ RLVVAPP+++IK+VDKDG R
Sbjct: 158 MMEAGIAEVKKRLVVAPPHYIIKVVDKDGIR 188
>gi|440798163|gb|ELR19231.1| proteasome subunit beta type2, putative [Acanthamoeba castellanii
str. Neff]
Length = 207
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 120/153 (78%), Gaps = 1/153 (0%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M LDSHKL+ A G GDRV FTE++Q+N+ LY+FRN + L T A ANF RGELA ALR S
Sbjct: 37 MALDSHKLLGAVGPVGDRVHFTEYVQRNLKLYKFRNNLTLGTHATANFVRGELADALRSS 96
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VN+LL G D+E GP+LY++DY+A++ K++ AA GY +YF LS++D+++ +++E+
Sbjct: 97 PYQVNLLLGGVDEE-GPALYFLDYLASMDKLEYAAHGYCAYFCLSILDKYYKKDLTLEQG 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+D+++KCI E+R+R ++ P+FVIK+VDK+G R
Sbjct: 156 IDIIEKCITELRARFIINSPDFVIKVVDKNGTR 188
>gi|452824734|gb|EME31735.1| 20S core proteasome subunit beta 4 [Galdieria sulphuraria]
Length = 193
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 114/154 (74%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M LDSHK +A GEPGD VQFTE+IQKN+ LY+F+ G+ L+T A ANF RGELA +R++
Sbjct: 36 MELDSHKTLAMGGEPGDFVQFTEYIQKNLHLYEFQTGLQLSTHAVANFIRGELARLIREA 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
P + N+LL G+D+ +GP LYYIDY+ TL K+D A GY S+F L +DR++ +++E+
Sbjct: 96 PVLANLLLGGFDEVSGPCLYYIDYLGTLEKLDYTAQGYASFFILGTLDRYYQKDITLEQG 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++L+ +CI ++ R V+ NF++K+VDKDG R+
Sbjct: 156 IELMKRCIQQLGKRFVINQRNFIMKVVDKDGVRQ 189
>gi|307106162|gb|EFN54409.1| hypothetical protein CHLNCDRAFT_135748 [Chlorella variabilis]
Length = 227
Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 112/153 (73%), Gaps = 2/153 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+DSHKL A SGE GDRV F+E+I NV LY RNG L+T A AN+TR ELATALRKSPY
Sbjct: 70 VDSHKLFAVSGEAGDRVNFSEYIIANVRLYALRNGATLSTKAVANYTRSELATALRKSPY 129
Query: 63 MVNILLAGYDKET--GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
N+L+AGYD+ GP+LY+ DY+ATLH ++ GYGSYF LSM D+ +H ++ EA
Sbjct: 130 HTNLLMAGYDQGEGGGPALYWCDYLATLHHMNICGTGYGSYFVLSMFDKLWHPNVTEAEA 189
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+++ K + E++SRLVVAPP +V+K++D G R
Sbjct: 190 FEMMRKGVDEVKSRLVVAPPKYVVKVIDSQGIR 222
>gi|414872239|tpg|DAA50796.1| TPA: hypothetical protein ZEAMMB73_385311, partial [Zea mays]
Length = 142
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/134 (67%), Positives = 98/134 (73%), Gaps = 27/134 (20%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDS KL+ ASGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAAAANFTRGELATALRK+
Sbjct: 36 MVLDSQKLMGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALRKN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PYMVNI+L GYDK+ G SLYYIDYIATLHK+DK
Sbjct: 96 PYMVNIILGGYDKDVGASLYYIDYIATLHKIDK--------------------------- 128
Query: 121 VDLVDKCILEIRSR 134
VDLVDKCI EIR R
Sbjct: 129 VDLVDKCIKEIRLR 142
>gi|255088812|ref|XP_002506328.1| predicted protein [Micromonas sp. RCC299]
gi|226521600|gb|ACO67586.1| predicted protein [Micromonas sp. RCC299]
Length = 208
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 110/150 (73%), Gaps = 1/150 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LDSHKL+A SG GD V F E+IQ N+ LY+ RNG+ L+T AA+++TR +LA +LRK PY
Sbjct: 38 LDSHKLMAMSGPKGDCVYFGEYIQANMKLYELRNGMKLSTHAASSYTRNQLAESLRKGPY 97
Query: 63 MVNILLAGYDKETGP-SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
VN+LLAGYD + SLY++DY+A+ KV+ GYG F LS+ D+H+ M+ EEA
Sbjct: 98 QVNLLLAGYDADVDEASLYFMDYLASCQKVNSGGHGYGGMFCLSLFDKHWKPRMTREEAG 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DLVDKCI E+R+RLV AP + +KIVDKDG
Sbjct: 158 DLVDKCIAEVRTRLVTAPTKYHVKIVDKDG 187
>gi|281207380|gb|EFA81563.1| proteasome subunit beta type 2 [Polysphondylium pallidum PN500]
Length = 202
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 113/152 (74%), Gaps = 1/152 (0%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP 61
VLD KL++++GEPGDR QF EFI KN+ LYQ RNG L+T+A A+F R ELATALR++P
Sbjct: 37 VLDEFKLLSSAGEPGDRTQFCEFIAKNLKLYQLRNGYSLSTSATAHFIRNELATALRRNP 96
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y VN+L+AGYD++TGP++YY+DY+A+L K+D GY +YF L ++DR H MS EE V
Sbjct: 97 YNVNLLVAGYDEKTGPAVYYMDYLASLQKLDFGCHGYAAYFLLGLLDRLHHKDMSYEEGV 156
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+L+ KC E+++R +V + +K + KDG +
Sbjct: 157 ELMHKCCEELQTRFLVG-GKYTLKYISKDGIQ 187
>gi|310656740|gb|ADP02178.1| putative 20S proteasome subunit beta-4 [Triticum aestivum]
Length = 170
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 106/165 (64%), Gaps = 41/165 (24%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M+LDSHKL+ ASGEPGDR +
Sbjct: 36 MLLDSHKLMGASGEPGDR-----------------------------------------N 54
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNI+LAG+DK+ G S+YYIDYIATLHK+DK AFGYGSYF LS+MD+ + M+VEEA
Sbjct: 55 PYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEA 114
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTP 165
VDLVDKCI EIR RLVVAP NF IKIVDKDGAR+YA RE D+P
Sbjct: 115 VDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGARDYARREIGGDSP 159
>gi|323451149|gb|EGB07027.1| hypothetical protein AURANDRAFT_60167 [Aureococcus anophagefferens]
Length = 201
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 108/153 (70%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M LD KL+ SG D V FTE++QKNV+LY+ NG+ L+T A NF RG+LATALRK
Sbjct: 36 MKLDDFKLLGQSGVGADNVAFTEYVQKNVALYKINNGLSLSTKATNNFIRGDLATALRKG 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY N+LL G+DK G SLYYIDY+A+ +KV+ GYGS F LS++DR + G+
Sbjct: 96 PYQTNLLLGGFDKGVGASLYYIDYMASSNKVNFGCHGYGSNFVLSILDREWTEGLDEAAG 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+D+++KCI E+++R ++ P F+IKIVDKDG R
Sbjct: 156 LDIINKCIAELQTRFLIHMPKFLIKIVDKDGIR 188
>gi|390349452|ref|XP_003727222.1| PREDICTED: proteasome subunit beta type-2-like [Strongylocentrotus
purpuratus]
Length = 201
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L S L+ +GE GD VQF E+IQKN+ LY+ RNG L+ AAANFTR LA LR K+P
Sbjct: 38 LSSKLLMLCAGESGDTVQFAEYIQKNIQLYKIRNGYELSPKAAANFTRKNLADFLRSKTP 97
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y VN+LLAG+D+ GP L+Y+DY+ +L +V AA GYGSYF+LS++DRH+ M+ ++AV
Sbjct: 98 YQVNLLLAGHDETDGPCLFYMDYLGSLQQVPFAAHGYGSYFTLSILDRHYRRDMTRDQAV 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+++ KC+LE++ R +V P F I+IVDKDG E
Sbjct: 158 EVLKKCLLEVQKRFIVNLPTFQIRIVDKDGIHE 190
>gi|412985192|emb|CCO20217.1| predicted protein [Bathycoccus prasinos]
Length = 221
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 109/152 (71%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LD KL A SG GD F EF++ N++LY+ +NG L+T+AAA++TR ELA ALR PY
Sbjct: 38 LDKTKLFALSGPKGDVSNFGEFVKCNLNLYRLKNGRSLSTSAAAHWTRNELAKALRSGPY 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN L AGYD ++GP LY++DY+AT+HKV+ + GYG FSLS+ D+H+ MS ++++
Sbjct: 98 QVNGLFAGYDDQSGPELYFLDYLATMHKVNSSGHGYGGMFSLSLFDKHWVPNMSRAQSLE 157
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
LV KC+ EI+ RLVVAP F+IKIV + G +
Sbjct: 158 LVKKCVAEIQERLVVAPEKFLIKIVSEKGVEQ 189
>gi|330795438|ref|XP_003285780.1| hypothetical protein DICPUDRAFT_46345 [Dictyostelium purpureum]
gi|325084244|gb|EGC37676.1| hypothetical protein DICPUDRAFT_46345 [Dictyostelium purpureum]
Length = 193
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M +D +KL++A+GE GDRVQFTE+I KN+ LY RNG L+T A+ANF R ELAT++R
Sbjct: 36 MEIDGNKLLSAAGEAGDRVQFTEYISKNIKLYSLRNGYSLSTPASANFIRNELATSIRSH 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY +N++LAGYDKETGPSLYY+DY+ +L K+ A GY SYF L ++DRH + ++++E
Sbjct: 96 PYQINLILAGYDKETGPSLYYMDYLGSLQKLTFACHGYSSYFLLGLLDRHHNVNLTLDEG 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ L+ C E+ +R +V+ +++K V DG +
Sbjct: 156 IALMKLCTKELNTRFLVSGK-YILKFVSADGIK 187
>gi|328871197|gb|EGG19568.1| proteasome subunit beta type 2 [Dictyostelium fasciculatum]
Length = 159
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP 61
++D+HKLI ++GE GDR QF EF+ KN LY RNG L+TAA ANFTR ELATALR P
Sbjct: 3 LIDTHKLIMSAGEHGDRSQFIEFVSKNCKLYNLRNGYALSTAATANFTRSELATALRSRP 62
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y VN+++AGYDKE S+YY+DY+A++ K+D A GY +YF L ++DRH MS EE +
Sbjct: 63 YNVNLIIAGYDKEHEGSIYYMDYLASMVKLDFACHGYAAYFLLGLLDRHHKKDMSFEEGM 122
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L+ C E+++R +V F+IK +++DG ++
Sbjct: 123 ALLKMCTQELKTRFLVGGK-FMIKHINQDGVKQ 154
>gi|147903930|ref|NP_001085540.1| proteasome (prosome, macropain) subunit, beta type, 2 [Xenopus
laevis]
gi|49119183|gb|AAH72908.1| MGC80364 protein [Xenopus laevis]
gi|77748113|gb|AAI06263.1| MGC80364 protein [Xenopus laevis]
Length = 199
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/145 (53%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GPSLYY+DY+A L K AA GYG+Y +LS++DR++ ++ EEAV+L+ K
Sbjct: 103 LLAGYDEHEGPSLYYMDYLAALAKTRFAAHGYGAYLTLSILDRYYKPDLTREEAVELLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
CI E++ R +++ P+F ++++DKDG
Sbjct: 163 CIAELQKRFILSLPSFTVRVIDKDG 187
>gi|303288049|ref|XP_003063313.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455145|gb|EEH52449.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 207
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LDSHKL+A SG GD V F E++Q N+ LY+ +NG L+T AA +F RGELA ALRK PY
Sbjct: 38 LDSHKLLAMSGPKGDCVHFGEYVQANMKLYELKNGHKLSTHAAMSFIRGELAAALRKGPY 97
Query: 63 MVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
VN+LLAGYD+ E SLY+IDY+A+ KV+ GYG F LS+ D+H+ M+ EA
Sbjct: 98 QVNMLLAGYDEHEDDASLYFIDYLASTQKVNSGGHGYGGMFCLSLFDKHWKPKMTRAEAD 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
LVD CI E+R RLV AP + +KIVDK G
Sbjct: 158 VLVDTCIAEVRERLVTAPAKYHVKIVDKTG 187
>gi|196008819|ref|XP_002114275.1| hypothetical protein TRIADDRAFT_50465 [Trichoplax adhaerens]
gi|190583294|gb|EDV23365.1| hypothetical protein TRIADDRAFT_50465 [Trichoplax adhaerens]
Length = 199
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS-PYMVNI 66
++A SG+PGD VQF EF+ KNV LY+ +NG +T AAAN+TR +LA +LR S PY VN+
Sbjct: 43 MMACSGDPGDSVQFAEFVAKNVELYRIKNGYSMTPNAAANYTRHQLAQSLRSSTPYTVNM 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+ GYD+ GPSLYY+DY+A+L K+ A GYGSYF+ S++DR++ GMS EA+ ++
Sbjct: 103 LIGGYDEYDGPSLYYLDYLASLQKLPFGAHGYGSYFTFSILDRYYKKGMSKAEALKVLSL 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
C+ E++ R ++ P+F IK +DKDG E + ++
Sbjct: 163 CLDEVKKRFIINLPSFNIKFIDKDGIHETSLQD 195
>gi|58332308|ref|NP_001011057.1| proteasome (prosome, macropain) subunit, beta type, 2 [Xenopus
(Silurana) tropicalis]
gi|54038181|gb|AAH84185.1| hypothetical LOC496467 [Xenopus (Silurana) tropicalis]
gi|89266833|emb|CAJ83920.1| proteasome (prosome macropain) subunit beta type 2 [Xenopus
(Silurana) tropicalis]
Length = 199
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 109/148 (73%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GPSLYY+DY+A L K AA GYG+Y +LS++DR++ ++ E+AV+L+ K
Sbjct: 103 LLAGYDEHDGPSLYYMDYLAALAKTRFAAHGYGAYLTLSILDRYYKPDLTREDAVELLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI E++ R +++ P+F ++++DKDG +
Sbjct: 163 CIAELQKRFILSLPSFTVRVIDKDGIHD 190
>gi|219115922|ref|XP_002178756.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409523|gb|EEC49454.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 199
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 105/154 (68%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
L SH + SG D V F EF+ KN+ LY+ N I L+T A ANF RGELATALRK P+
Sbjct: 38 LTSHSAMGVSGPNCDMVNFCEFVAKNIKLYELSNDIKLSTHAQANFARGELATALRKGPF 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN LL G+D + G SLYY+DY+A L KV+ + GY S F LS+MD+ + ++ +AV
Sbjct: 98 QVNTLLGGFDNKVGASLYYLDYMAALQKVNYGSQGYASNFCLSIMDKEYRDDLNEADAVK 157
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYA 156
+V++CI E+ +R +++ NF+IK+VDKDG R Y+
Sbjct: 158 IVEQCIHELHTRFLISQKNFIIKVVDKDGVRLYS 191
>gi|290999893|ref|XP_002682514.1| 20S proteasome, A and B subunits [Naegleria gruberi]
gi|284096141|gb|EFC49770.1| 20S proteasome, A and B subunits [Naegleria gruberi]
Length = 209
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 108/149 (72%), Gaps = 2/149 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
LIAA GE GDRVQF EFI KN++LY+ RN L+ A+A+F R ELA ALR PY NI+
Sbjct: 45 LIAAQGEQGDRVQFVEFITKNLNLYRLRNDTNLSVKASAHFVRQELAKALRSGPYQTNIM 104
Query: 68 LAGYDKETG--PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
+ G D G P LYYIDY++++ +V A GYGSYF+LS++D+H+ GM++ EA+ ++
Sbjct: 105 VGGVDDIEGAKPELYYIDYLSSMQEVKYGAHGYGSYFTLSILDKHYKDGMNLNEALIVLR 164
Query: 126 KCILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ EI+ RL++ P+F++K+VDK G+RE
Sbjct: 165 MCVAEIQKRLLLNTPSFIVKVVDKYGSRE 193
>gi|156359803|ref|XP_001624954.1| predicted protein [Nematostella vectensis]
gi|156211762|gb|EDO32854.1| predicted protein [Nematostella vectensis]
Length = 197
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 109/150 (72%), Gaps = 1/150 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L + L+ +GE GD QF E+I+KNV LY+ RNG LT AAANFTR LA LR ++P
Sbjct: 38 LSDNLLMLVTGESGDTAQFAEYIEKNVQLYKMRNGYDLTPHAAANFTRRTLAEYLRSRTP 97
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
YMVN+LLAG+ GP+LY++DY+A L KV AA GYGS+F LS+MDR+F M+ ++A+
Sbjct: 98 YMVNLLLAGHSSNEGPALYHMDYLAALSKVPFAAHGYGSFFVLSIMDRYFKPNMTKDQAL 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+L+++C E++ R +V PNF +++VDKDG
Sbjct: 158 ELLERCTNEVQKRFIVNLPNFTVRVVDKDG 187
>gi|318103394|ref|NP_001188165.1| proteasome subunit beta type-2 [Ictalurus punctatus]
gi|308322043|gb|ADO28159.1| proteasome subunit beta type-2 [Ictalurus furcatus]
gi|308323629|gb|ADO28950.1| proteasome subunit beta type-2 [Ictalurus punctatus]
Length = 199
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 107/145 (73%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY++ L K AA GYG++ +LS+MDR++ ++ EEA+DL+ K
Sbjct: 103 LLAGYDEADGPALYYMDYMSALAKAPFAAHGYGAFLTLSIMDRYYRPDLTREEALDLLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
CI E+ R ++ P+F ++++DKDG
Sbjct: 163 CIEELNKRFILNLPSFTVRLIDKDG 187
>gi|148234532|ref|NP_001084761.1| uncharacterized protein LOC431796 [Xenopus laevis]
gi|47125243|gb|AAH70836.1| MGC84496 protein [Xenopus laevis]
Length = 199
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 108/148 (72%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GPSLYY+DY++ L K AA GYG+Y +LS++DR++ ++ E+AV+L+ K
Sbjct: 103 LLAGYDEHAGPSLYYMDYLSALAKTRFAAHGYGAYLTLSILDRYYKPDLTREDAVELLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI E++ R ++ P+F ++++DKDG +
Sbjct: 163 CISELQKRFILNLPSFTVRVIDKDGIHD 190
>gi|405954435|gb|EKC21877.1| Proteasome subunit beta type-2 [Crassostrea gigas]
Length = 208
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 109/148 (73%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
++ SGE GD VQF EFI KN+ LY+ RNG L+ +AAANFTR LA LR ++PYMVN+
Sbjct: 43 IMLVSGESGDTVQFAEFISKNIQLYKMRNGYDLSPSAAANFTRKNLADYLRSRTPYMVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+AGYDK GPSLY++DY+A+++K AA GYG++FSL+++DR++ ++ AV+L+
Sbjct: 103 LMAGYDKNEGPSLYFMDYLASMNKCPFAAHGYGAFFSLAILDRYYTEDVTRARAVELLTM 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ EI+ R ++ P F ++IVDKDG E
Sbjct: 163 CVEEIKRRFIINLPAFRVRIVDKDGIHE 190
>gi|387017848|gb|AFJ51042.1| Proteasome subunit beta type-2-like [Crotalus adamanteus]
Length = 201
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 109/148 (73%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR +SPY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRSPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A+L KV AA GYG++ +LS++DR++ G++ EEA++++ K
Sbjct: 103 LLAGYDEHDGPALYYMDYLASLAKVPFAAHGYGAFLTLSILDRYYKPGITREEAIEVLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ P+F + +DKDG E
Sbjct: 163 CLEELQKRFILNLPSFNARFIDKDGIHE 190
>gi|332373238|gb|AEE61760.1| unknown [Dendroctonus ponderosae]
Length = 200
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L + ++A SGE GD QF E+I KN+ LY+ RN L+ A++FTR LA LR +SP
Sbjct: 38 LSNQLVMAVSGESGDTTQFAEYIAKNIQLYKMRNTYELSPKEASSFTRRILADTLRTRSP 97
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
YMVN+LLAGYD++ GP L+Y+D++A++ KVD AA GYG +FSLS+MDR++ M+ E+
Sbjct: 98 YMVNLLLAGYDEKEGPQLFYMDHLASVAKVDYAAHGYGGFFSLSIMDRNYLKTMTQEQGY 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+L+ KC+ E++ RL++ PNF ++IVDK+G ++
Sbjct: 158 ELMKKCVEEVQKRLIINLPNFKVQIVDKNGIKD 190
>gi|321458597|gb|EFX69663.1| hypothetical protein DAPPUDRAFT_300859 [Daphnia pulex]
Length = 201
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L L+A +GE GD QF E+I+KN+ LY+ RNG L+ AAANFTR LA +LR +SP
Sbjct: 38 LSDRLLMAVTGESGDTTQFAEYIEKNIQLYKMRNGYELSPPAAANFTRRNLADSLRSRSP 97
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
YMVN LLAGY + TGP LY++DY+A++ K A GYG FS+ +MDR++ ++ +EA
Sbjct: 98 YMVNFLLAGYSERTGPELYWMDYLASMIKTPFATHGYGGMFSIGIMDRYYRPDLTEQEAY 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
D++ KC+ EI+ RL++ PNF +K++DK+G
Sbjct: 158 DIMKKCVAEIQKRLIINLPNFQVKVLDKNG 187
>gi|50540284|ref|NP_001002609.1| proteasome subunit beta type-2 [Danio rerio]
gi|49900459|gb|AAH75983.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Danio rerio]
Length = 199
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 106/145 (73%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP LYY+DY++ L K AA GYG++ +LS++DR++ ++ EEAVDL+ K
Sbjct: 103 LLAGYDETDGPGLYYMDYLSALAKAPFAAHGYGAFLTLSILDRYYRPDLTREEAVDLLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E+ R ++ P+F ++++DKDG
Sbjct: 163 CLEELNKRFILNLPSFTVRLIDKDG 187
>gi|328768529|gb|EGF78575.1| hypothetical protein BATDEDRAFT_30482 [Batrachochytrium
dendrobatidis JAM81]
Length = 194
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L +H L+ SGE GD VQF E+IQ N L+ R+GI L+T A A+FTR ELAT+LR ++P
Sbjct: 38 LTNHTLMVYSGEAGDTVQFAEYIQCNSRLHSIRHGIELSTNAIASFTRMELATSLRSRNP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+AG + +TG P LY+IDYI+ + K+ AA GY SYF LS MDR++H ++ EEA
Sbjct: 98 YHVNVLIAGANPKTGAPELYWIDYISNMSKLKFAAHGYASYFCLSTMDRYWHENITQEEA 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ KC+ E+R R + P+F +KIVDK+G +E
Sbjct: 158 IALLKKCLAELRVRFIGNLPDFFVKIVDKNGIKE 191
>gi|428163304|gb|EKX32382.1| 20S proteasome subunit beta type 2 [Guillardia theta CCMP2712]
Length = 201
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 104/151 (68%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LD+ KL+ GE GD F+E++QKN++LY RNG L+T AAA+F RGE+A A+R SP
Sbjct: 38 LDNSKLLGCVGELGDTKNFSEYVQKNMALYALRNGCHLSTHAAAHFVRGEIAHAIRHSPK 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
M N++L G+D ++GPSLY+IDY+ +H+++ A GYG +F+ S+MDR + M +EE +
Sbjct: 98 MCNMILVGFDGDSGPSLYHIDYLGGMHRMNYGAHGYGGFFASSLMDRLWRPNMPLEEGIQ 157
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
L+ K EI R +V F +K+VDKDG R
Sbjct: 158 LMKKAFAEINQRFLVGGATFTLKVVDKDGTR 188
>gi|348519415|ref|XP_003447226.1| PREDICTED: proteasome subunit beta type-2-like [Oreochromis
niloticus]
Length = 199
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 108/148 (72%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD GP LYY+D++++L K AA GYG+Y +LS++DR++ +S +EAVDL+ K
Sbjct: 103 LLAGYDDTDGPGLYYMDHLSSLAKAPFAAHGYGAYLTLSILDRYYRPDLSRDEAVDLLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ P+F ++++DK+G +
Sbjct: 163 CVEELKKRFILNLPSFTVRLIDKEGIHD 190
>gi|442750345|gb|JAA67332.1| Putative 20s proteasome regulatory subunit beta type psmb2/pre1
[Ixodes ricinus]
Length = 202
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 109/153 (71%), Gaps = 2/153 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L + L+A GE GD VQF EFI KN+ LY+ RNG L+ AAANFTR LA LR ++P
Sbjct: 38 LSDNLLMAVCGEAGDTVQFAEFIAKNIQLYKMRNGYELSPTAAANFTRRNLADYLRSRTP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LLAG+DK+ P L+Y+DY+AT+ KV A GYG++F +S++DR++ M+ EEA
Sbjct: 98 YSVNLLLAGFDKQAAQPELFYMDYLATMAKVPYGAHGYGAFFLISVLDRYYREDMNEEEA 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
VDL+ KC+ E++ R +V P F +++VDK+G R
Sbjct: 158 VDLLKKCVFEVQKRFLVNLPAFKVQLVDKNGIR 190
>gi|327289111|ref|XP_003229268.1| PREDICTED: proteasome subunit beta type-2-like [Anolis
carolinensis]
Length = 201
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 108/148 (72%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A+L K AA GYG++ +LS++DR++ G++ EEA++++ K
Sbjct: 103 LLAGYDEHDGPTLYYMDYLASLAKAPFAAHGYGAFLTLSILDRYYKPGITREEAIEVLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ P+F + +DKDG E
Sbjct: 163 CLEELQKRFILNLPSFNARFIDKDGIHE 190
>gi|224082072|ref|XP_002198635.1| PREDICTED: proteasome subunit beta type-2 [Taeniopygia guttata]
Length = 201
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GEPGD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEPGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD GP+LYY+DY+A L K AA GYG++ +LS++DR++ G++ EEAVDL+ +
Sbjct: 103 LLAGYDDHEGPALYYMDYLAALAKTPFAAHGYGAFLTLSILDRYYKPGITREEAVDLLKQ 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ +F + +DK+G E
Sbjct: 163 CLEELKKRFILNLTSFNARFIDKEGIHE 190
>gi|392590513|gb|EIW79842.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
Length = 194
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 111/155 (71%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
L H L+A SGEPGD +QF E++++N+ LYQ RN PL AAAA++ R LA +LR +S
Sbjct: 37 TLSPHLLMAYSGEPGDTLQFAEYVERNIRLYQIRNLYPLRPAAAASWIRRTLADSLRSRS 96
Query: 61 PYMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+L+ GYD+ T PSL++IDY+ T +V A GYGSYF+LS++DR+ + S+EE
Sbjct: 97 PYQVNLLVGGYDEATHSPSLHWIDYLGTSVEVPFGAHGYGSYFALSLLDRYHNPEASLEE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+D + +CI E+ RLVV+P + +K+VDKDG RE
Sbjct: 157 GLDTLRRCINEVSKRLVVSPGKYKVKVVDKDGTRE 191
>gi|66825279|ref|XP_645994.1| proteasome subunit beta type 2 [Dictyostelium discoideum AX4]
gi|74858816|sp|Q55DY7.1|PSB2_DICDI RecName: Full=Proteasome subunit beta type-2
gi|60474149|gb|EAL72086.1| proteasome subunit beta type 2 [Dictyostelium discoideum AX4]
Length = 198
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 107/154 (69%), Gaps = 4/154 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D HKL+ ++GE GDRVQFTE+I KN+ LY RN P++T AAANF R ELAT++R PY
Sbjct: 38 IDGHKLLLSAGEAGDRVQFTEYISKNIKLYSLRNSYPMSTPAAANFIRNELATSIRSHPY 97
Query: 63 MVNILLAGYDKET---GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
+N++LAGYDKE G SLYY+DY+ +L K++ GY SYF L ++DRH +S+E+
Sbjct: 98 SINLILAGYDKEVEDGGTSLYYMDYLGSLQKLNFGCHGYASYFLLGLLDRHHKCDLSLED 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
++L+ C E+++R +V+ + +K V +G +
Sbjct: 158 GINLMHLCTTELKTRFLVS-GKYTLKFVSSEGIK 190
>gi|294930707|ref|XP_002779664.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239889072|gb|EER11459.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 198
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D++KL+AA+G D QF EFI +NV LY NG+ LTT A A+FTR ELA ALRK PY
Sbjct: 39 MDNNKLVAAAGPQADSNQFLEFISRNVELYALVNGVQLTTHALASFTRNELADALRKGPY 98
Query: 63 MVNILLAGYDKETGP-SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
VN+L+ GYD + G SLYY+DY+A+ K+ + A GY +YF L ++D+ + M+ E+ +
Sbjct: 99 QVNMLIGGYDDKDGSASLYYMDYLASCQKITRGAHGYAAYFVLGLLDKLYKKDMTQEDGL 158
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
D + +CI E + R ++ NF+IK VDKDG
Sbjct: 159 DAIKQCIKECKKRFIIDKSNFIIKAVDKDG 188
>gi|410911568|ref|XP_003969262.1| PREDICTED: proteasome subunit beta type-2-like [Takifugu rubripes]
Length = 199
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ +AAANFTR L+ LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPSAAANFTRKNLSEYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD GP LYY+DY+A+L K AA GYG+Y +LS++DRH+ ++ EEAV L+
Sbjct: 103 LLAGYDDADGPGLYYMDYLASLAKAPFAAHGYGAYLTLSILDRHYKPDLTREEAVALLKM 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E+ R ++ P+F ++++DK+G ++
Sbjct: 163 CVEELSKRFILNLPSFSVRLIDKEGIQD 190
>gi|260793493|ref|XP_002591746.1| hypothetical protein BRAFLDRAFT_123512 [Branchiostoma floridae]
gi|229276956|gb|EEN47757.1| hypothetical protein BRAFLDRAFT_123512 [Branchiostoma floridae]
Length = 201
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS-PYMVNI 66
L+ +GE GD VQF E+IQKN+ LY+ RNG L+ AAANFTR +A LR S PY VN+
Sbjct: 43 LMGCTGESGDTVQFAEYIQKNIQLYKMRNGYTLSPHAAANFTRKNMADYLRSSTPYFVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+AG+D+ GP LY++DY+A+L+KV AA GYG +F LS+ D+++ M+ +EAV+L+ K
Sbjct: 103 LIAGHDETAGPQLYFLDYLASLNKVPFAAHGYGGFFVLSIFDKYYREDMTKDEAVELLHK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
I EI+ R +V P F +++VDKDG +
Sbjct: 163 AIAEIQKRFIVNLPTFSVRMVDKDGIHD 190
>gi|156541240|ref|XP_001600736.1| PREDICTED: proteasome subunit beta type-2-like [Nasonia
vitripennis]
Length = 207
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 106/160 (66%), Gaps = 9/160 (5%)
Query: 1 MVLDSHKL--------IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGE 52
M D HK+ +A SGE GD QF+E+I KN+ LY+ RNG L+ AAANFTR
Sbjct: 28 MKSDEHKIHQVSKKLVMAVSGESGDATQFSEYISKNLQLYKMRNGYELSPKAAANFTRRN 87
Query: 53 LATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
LA LR ++PY VN+L+AGYD TGP LY+IDY+A+ KV AA GYG +FSL+++DR+
Sbjct: 88 LADYLRSRTPYFVNMLMAGYDDHTGPELYFIDYLASCVKVPYAAHGYGGFFSLTILDRYH 147
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++ EE L+ KC+ EI RL+V PNF ++ + KDG
Sbjct: 148 RDNLTEEEGYALLKKCVREIHKRLIVNLPNFKVQKISKDG 187
>gi|91086657|ref|XP_967917.1| PREDICTED: similar to proteasome beta 2 subunit-like protein
[Tribolium castaneum]
gi|270009752|gb|EFA06200.1| hypothetical protein TcasGA2_TC009049 [Tribolium castaneum]
Length = 202
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 114/163 (69%), Gaps = 4/163 (2%)
Query: 5 SHKL-IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPY 62
S+KL +A +GE GD QF E+I KNV LY+ RN L+ A++FTR LA LR ++PY
Sbjct: 39 SNKLAMAIAGEQGDTNQFAEYIAKNVQLYKMRNNYELSPKEASHFTRRILADNLRSRTPY 98
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN+LLAGYD + GP LY++DY+A++ VD AA GYG YFSLS+MDR++ M+ ++ +
Sbjct: 99 HVNLLLAGYDNQEGPQLYFMDYLASVASVDYAAHGYGGYFSLSIMDRNYLPTMTKDQGYE 158
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYA--WRESVKD 163
L+ KC+ E+ +RL+V PNF +++VDKDG + ES+KD
Sbjct: 159 LLKKCVKEVHTRLIVNLPNFKVQVVDKDGVHDMPTITLESLKD 201
>gi|169869498|ref|XP_001841312.1| proteasome component Pre1 [Coprinopsis cinerea okayama7#130]
gi|116497590|gb|EAU80485.1| proteasome component Pre1 [Coprinopsis cinerea okayama7#130]
Length = 194
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 110/155 (70%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL H L+A SGEPGD VQF E+ ++N+ LYQ RN L +AAA++ R LA +LR ++
Sbjct: 37 VLGPHLLMAYSGEPGDTVQFAEYAERNIRLYQIRNTYALRPSAAASWIRRALADSLRSRN 96
Query: 61 PYMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL GYD T P LY+IDY+ T+ +V AA GYG+YF+LS++DR+ + S+EE
Sbjct: 97 PYSVNLLLGGYDTATHDPHLYWIDYLGTITRVPFAAHGYGAYFALSLLDRYHNPEASLEE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++ + +CI E+ RLVV+P + +K+VDKDG RE
Sbjct: 157 GLETLKRCIDEVAKRLVVSPGKYKVKVVDKDGVRE 191
>gi|256084819|ref|XP_002578623.1| proteasome subunit beta 2 (T01 family) [Schistosoma mansoni]
gi|360045145|emb|CCD82693.1| proteasome subunit beta 2 (T01 family) [Schistosoma mansoni]
Length = 201
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L A GE GD QF+EFIQ+N+ LY+ RNG LT +AAANFTR +A +LR +SPY VN+
Sbjct: 43 LAAVCGESGDTSQFSEFIQQNMQLYEIRNGYELTPSAAANFTRNNMAESLRSRSPYFVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+AG+D +TGP LYY+DY+A+L KV A GYG+ +LS++DR M+V EAV L+
Sbjct: 103 LIAGFDLQTGPELYYLDYLASLIKVPFAVHGYGALVALSILDRMHRPDMTVNEAVALLRL 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI E++ RLV+ ++++IV KDG E
Sbjct: 163 CIQEVQKRLVINLDRYMVRIVTKDGIEE 190
>gi|289724871|gb|ADD18371.1| 20S proteasome regulatory subunit beta type PSMB2/PRE1 [Glossina
morsitans morsitans]
Length = 195
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L A GE GD QF+EFIQ+N+ LY+ RNG LT +AAANFTR +A +LR +SPY VN+
Sbjct: 37 LAAVCGESGDTSQFSEFIQQNMQLYEIRNGYELTPSAAANFTRNNMAESLRSRSPYFVNL 96
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+AG+D +TGP LYY+DY+A+L KV A GYG+ +LS++DR M+V EAV L+
Sbjct: 97 LIAGFDLQTGPELYYLDYLASLIKVPFAVHGYGALVALSILDRMHRPDMTVNEAVALLRL 156
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI E++ RLV+ ++++IV KDG E
Sbjct: 157 CIQEVQKRLVINLDRYMVRIVTKDGIEE 184
>gi|422295602|gb|EKU22901.1| signal peptidase, endoplasmic reticulum-type [Nannochloropsis
gaditana CCMP526]
Length = 362
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 107/151 (70%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LDSHKL+AA+G D TE++QKN++LY+F N + L T AAANF R LATALRK PY
Sbjct: 210 LDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPY 269
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
N+LL G+D++ G +LY++DY+ ++ KV+ A GY S F+LS+ DR + GM++ EA
Sbjct: 270 QTNLLLGGFDEKDGAALYFLDYLGSMQKVNFGAQGYASNFTLSIFDREYREGMTLPEAEV 329
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+++K E+ R +++ P +++K+VDKDG R
Sbjct: 330 VLEKAKKELAVRFLISQPKWIMKVVDKDGVR 360
>gi|170089715|ref|XP_001876080.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164649340|gb|EDR13582.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 194
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 109/154 (70%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L+A SGEPGD VQF E++++N+ LYQ RN PL +AAA++ R LA +LR + P
Sbjct: 38 LSPHLLMAYSGEPGDTVQFAEYVERNIRLYQIRNLYPLRPSAAASWIRRALAESLRSRKP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL GYD + P LY+IDY+ T+ +V AA GYGSYF+LS++DR+ + ++EE
Sbjct: 98 YSVNLLLGGYDTASHDPHLYWIDYLGTMTEVPFAAHGYGSYFALSLLDRYHNPEATIEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ + +CI E+ RLVV+P + +KIVD+DG RE
Sbjct: 158 LATLKRCIDEVAKRLVVSPGKYKVKIVDQDGIRE 191
>gi|29841035|gb|AAP06048.1| similar to NM_017284 proteasome (prosome, macropain) subunit, beta
type, 2 in Rattus norvegicus [Schistosoma japonicum]
gi|226471306|emb|CAX70734.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
gi|226471308|emb|CAX70735.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
gi|226489230|emb|CAX75759.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
gi|226489232|emb|CAX75760.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
gi|226489234|emb|CAX75761.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
Length = 201
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 104/148 (70%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L A GE GD QF+EFIQ+N+ LY+ RNG LT AAANFTR +A +LR +SPY VN+
Sbjct: 43 LAAVCGESGDTSQFSEFIQQNMQLYEIRNGYELTPNAAANFTRNNMAESLRSRSPYFVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+AG+D TGP LY++DY+A+L KV A GYG+ SLS++DR M+V+EAV L+
Sbjct: 103 LIAGFDSHTGPELYFLDYLASLIKVPFAVHGYGALVSLSILDRMHRPDMTVDEAVALLRL 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI E++ RLV+ ++++IV KDG E
Sbjct: 163 CIQEVQKRLVINLDRYMVRIVTKDGIEE 190
>gi|401399130|ref|XP_003880481.1| proteasome (Prosome, macropain) subunit, beta type, 1, related
[Neospora caninum Liverpool]
gi|325114891|emb|CBZ50448.1| proteasome (Prosome, macropain) subunit, beta type, 1, related
[Neospora caninum Liverpool]
Length = 191
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M++D +K++ +G+ GDR+QF ++IQKN+ LY+FRN L+ AA A+FTR +LA LR+S
Sbjct: 36 MLVDDNKVMGLAGQIGDRLQFGDYIQKNIHLYRFRNNKKLSCAATASFTRQQLAYYLRRS 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY V+++LAGYD E GP LY++DY+A++ V+K A GY +YF ++DR++H ++ EEA
Sbjct: 96 PYHVDVMLAGYD-EMGPHLYWMDYLASMASVNKGAHGYAAYFLGGLLDRYYHPELTEEEA 154
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ +++ C E+ +R V++ +F +KI KDG R
Sbjct: 155 LKIIEMCKKELMTRFVISQASFRVKIATKDGIR 187
>gi|61612103|gb|AAX47291.1| proteasome beta 2 subunit [Clonorchis sinensis]
Length = 201
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L + L AA GE GD QF EFIQ+N+ LY+ RNG L+ AANFTR LA ALR + P
Sbjct: 38 LSTRILAAACGEAGDTTQFAEFIQQNMQLYEIRNGYELSPYGAANFTRSNLANALRSRKP 97
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y VN+++AG+D + GP L+Y+DY+ATL KV GYGSY +LS++DR + M+V++AV
Sbjct: 98 YQVNMIIAGFDTQKGPELFYMDYLATLAKVPFVVHGYGSYLTLSVLDRDYRPDMTVDQAV 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DL+ C EI+ R +V + +++V KDG
Sbjct: 158 DLLRSCAKEIQKRFIVNLDRYCVRLVTKDG 187
>gi|443691508|gb|ELT93338.1| hypothetical protein CAPTEDRAFT_176004 [Capitella teleta]
Length = 199
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 104/145 (71%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
++A SGE GD VQF E+I KN+ LY+ RNG L+ AAANFTR +A LR ++PYMVN+
Sbjct: 43 VMAVSGESGDTVQFAEYIAKNIQLYKMRNGYELSPHAAANFTRKNMADFLRSRTPYMVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+AG+D+E GPSL+++DY+A+L +V GYGSY SL ++D+ + ++ EE ++L+ K
Sbjct: 103 LMAGFDEEKGPSLFFMDYLASLVEVPYGIHGYGSYLSLGILDKFYREDLNREEVLELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ EI R +V F IKIVDKDG
Sbjct: 163 CVQEIEKRFIVNLGTFKIKIVDKDG 187
>gi|403418699|emb|CCM05399.1| predicted protein [Fibroporia radiculosa]
Length = 194
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 108/155 (69%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL H L+A SGEPGD VQF E++++N+ LYQ RN L ++AA++ R LA ++R +
Sbjct: 37 VLSPHLLMAFSGEPGDTVQFAEYVERNIRLYQIRNTYALRPSSAASWIRRTLADSIRSRK 96
Query: 61 PYMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+L+ GYD T PSLY++DY+ T V A GYGSYF+LS++DR+ + ++EE
Sbjct: 97 PYAVNLLVGGYDTSTHTPSLYWVDYLGTQASVPFGAHGYGSYFALSLLDRYHNPEATLEE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+D + +CI E+ RL+VAP + +KIVDKDG RE
Sbjct: 157 GLDTLRRCIDEVSKRLIVAPGKYKVKIVDKDGVRE 191
>gi|358333678|dbj|GAA52161.1| 20S proteasome subunit beta 4 [Clonorchis sinensis]
Length = 201
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L + L AA GE GD QF EFIQ+N+ LY+ RNG L+ AANFTR LA ALR + P
Sbjct: 38 LSTRILAAACGEAGDTTQFAEFIQQNMQLYEIRNGYELSPYGAANFTRSNLANALRSRKP 97
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y VN+++AG+D + GP L+Y+DY+ATL KV GYGSY +LS++DR + M+V++AV
Sbjct: 98 YQVNMIIAGFDTQKGPELFYMDYLATLAKVPFVVHGYGSYLTLSVLDRDYRPDMTVDQAV 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DL+ C EI+ R +V + +++V KDG
Sbjct: 158 DLLRSCAKEIQKRFIVNLDRYCVRLVTKDG 187
>gi|195433599|ref|XP_002064798.1| GK15122 [Drosophila willistoni]
gi|194160883|gb|EDW75784.1| GK15122 [Drosophila willistoni]
Length = 207
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 101/147 (68%), Gaps = 1/147 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
LI+ +GE GD QFTEFI KN+SLY+ RNG L+ AAA+FTR LA LR ++PY V +
Sbjct: 43 LISTTGESGDTDQFTEFISKNISLYKMRNGYDLSPRAAAHFTRKNLAEYLRSRTPYQVFM 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
+ GYD + GP L +IDY+AT V+ A GYGS F S+ DR++H ++ EEA D+ K
Sbjct: 103 FVGGYDPQEGPELTFIDYLATAKSVNYAGHGYGSIFCSSIYDRYWHPNITQEEAYDVFKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGAR 153
C+LEI+ RLVV NF + +VDKDG R
Sbjct: 163 CVLEIQKRLVVNLKNFTVAVVDKDGVR 189
>gi|395526506|ref|XP_003765403.1| PREDICTED: proteasome subunit beta type-2 [Sarcophilus harrisii]
Length = 176
Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 108/148 (72%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 18 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 77
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ ++ EEAV+L+ K
Sbjct: 78 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPSITREEAVELLKK 137
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ P+F ++I+DKDG E
Sbjct: 138 CLEELQKRFILNLPSFSVRIIDKDGIHE 165
>gi|449546189|gb|EMD37159.1| 20S proteasome subunit [Ceriporiopsis subvermispora B]
Length = 194
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 107/155 (69%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL H L+A SGEPGD VQF EFI++N+ LY RN PL +AA++ R LA ++R +
Sbjct: 37 VLSPHLLMAYSGEPGDTVQFAEFIERNIRLYHIRNPHPLRPQSAASWIRRSLADSIRSRR 96
Query: 61 PYMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+L+ GYD E P LY++DY+ T+ +V AA GYG+YF+LS++DR+ ++EE
Sbjct: 97 PYAVNLLVGGYDPAEHAPHLYWMDYLGTMAEVPFAAHGYGAYFALSLLDRYHDPEANLEE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ + KCI E+ RLVVAP + +K+VDKDG RE
Sbjct: 157 GIATLKKCIDEVAQRLVVAPGKYKVKVVDKDGVRE 191
>gi|409078521|gb|EKM78884.1| hypothetical protein AGABI1DRAFT_114444 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426199530|gb|EKV49455.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 194
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 105/151 (69%), Gaps = 2/151 (1%)
Query: 6 HKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMV 64
H L+ SGEPGD VQF E+I++N+ LYQ RN PL AAA+++ R LA +LR + PY V
Sbjct: 41 HLLMTYSGEPGDTVQFAEYIERNLRLYQIRNIYPLRPAAASSWIRRSLAESLRSRHPYSV 100
Query: 65 NILLAGYDKE-TGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDL 123
N+LL GYD + P LY+IDY+ T+ +V AA GYGSYF LS+MDR+ +EE ++
Sbjct: 101 NLLLGGYDTSLSEPKLYWIDYLGTVTEVPFAAHGYGSYFVLSLMDRYHDPEAPLEEGLET 160
Query: 124 VDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ KCI E+ RL+V+P + +KIVDKDG R+
Sbjct: 161 LKKCIQEVSKRLIVSPERYKVKIVDKDGVRD 191
>gi|384483737|gb|EIE75917.1| hypothetical protein RO3G_00621 [Rhizopus delemar RA 99-880]
Length = 167
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+SH ++ SGEPGD V F E+IQ+N+ LY RNGI L+ A A FTR ELA +LR + P
Sbjct: 11 LNSHTVLLYSGEPGDTVNFAEYIQRNIKLYGIRNGIELSPKATATFTRRELADSLRSRHP 70
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+++ GYD K+ LY+IDY+ + + A GYG+YF S+MDRH+ MSV+EA
Sbjct: 71 YSVNLIVGGYDVKKQKSELYWIDYLGAMASLPFCAQGYGAYFCTSLMDRHYKEDMSVDEA 130
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGA 152
L+ CI E+++R +V PNF ++DKDGA
Sbjct: 131 KTLMKMCIQELKTRFIVNLPNFKTTLIDKDGA 162
>gi|259089098|ref|NP_001158587.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
gi|225705056|gb|ACO08374.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
Length = 200
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKN+ LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAG+D+ GP LYY+D+++ L K AA G+G+Y +LS++DR++ ++ +EA+DL+ K
Sbjct: 103 LLAGFDETDGPGLYYMDHLSALAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAMDLLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI E+ R ++ P+F ++++DKDG +
Sbjct: 163 CIEELNHRFILNLPSFSVRLIDKDGTHD 190
>gi|345324600|ref|XP_001508741.2| PREDICTED: proteasome subunit beta type-2-like [Ornithorhynchus
anatinus]
Length = 201
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 107/145 (73%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ ++ EEA++L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPSITREEAIELLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P+F ++I+DKDG
Sbjct: 163 CLAELKKRFILNLPSFTVRIIDKDG 187
>gi|225705784|gb|ACO08738.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
Length = 200
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKN+ LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAG+D+ GP LYY+D+++ L K AA G+G+Y +LS++DR++ ++ +EA+DL+ K
Sbjct: 103 LLAGFDETDGPGLYYMDHLSALAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAMDLLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI E+ R ++ P+F ++++DKDG +
Sbjct: 163 CIEELNHRFILNLPSFSVRLIDKDGTHD 190
>gi|225704100|gb|ACO07896.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
Length = 200
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKN+ LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAG+D+ GP LYY+D+++ L K AA G+G+Y +LS++DR++ ++ +EA+DL+ K
Sbjct: 103 LLAGFDETDGPGLYYMDHLSALAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAMDLLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI E+ R ++ P+F ++++DKDG +
Sbjct: 163 CIEELNHRFILNLPSFSVRLIDKDGTHD 190
>gi|237840493|ref|XP_002369544.1| proteasome subunit beta type 2, putative [Toxoplasma gondii ME49]
gi|211967208|gb|EEB02404.1| proteasome subunit beta type 2, putative [Toxoplasma gondii ME49]
gi|221483239|gb|EEE21563.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
gi|221504161|gb|EEE29838.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 191
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
+++D K++ +G+ GDR+QF ++IQKN+ LY+FRN L AAAANFTR +LA LR+S
Sbjct: 36 LLVDDDKVMGFAGQIGDRLQFGDYIQKNIHLYRFRNNKKLGCAAAANFTRQQLAYYLRRS 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY V+++LAGYD E GP LY++DY+A++ V+KAA GY +YF ++DR++H ++ EEA
Sbjct: 96 PYHVDVMLAGYD-EMGPHLYWMDYLASMVSVNKAAHGYAAYFLGGLLDRYYHPELTEEEA 154
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ +++ C E+ +R +V+ +F +K+ K+G R
Sbjct: 155 LKIIEMCKKELMTRFIVSQASFRVKVATKEGIR 187
>gi|225706970|gb|ACO09331.1| Proteasome subunit beta type 2 [Osmerus mordax]
Length = 199
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 107/148 (72%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ +AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPSAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP L+Y+D+++ L K AA GYG++ +LS++DR++ ++ +EAVDL+ K
Sbjct: 103 LLAGYDESDGPGLFYMDHLSALAKAPFAAHGYGAFLTLSILDRYYRPELTRDEAVDLLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E+ R ++ P+F ++++DK+G +
Sbjct: 163 CVEELNKRFILNLPSFSVRLIDKEGIHD 190
>gi|340721459|ref|XP_003399137.1| PREDICTED: proteasome subunit beta type-2-like [Bombus terrestris]
gi|350406548|ref|XP_003487808.1| PREDICTED: proteasome subunit beta type-2-like [Bombus impatiens]
Length = 207
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 106/152 (69%), Gaps = 2/152 (1%)
Query: 5 SHKLI-AASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPY 62
S KLI A SGE GD QF+E+I KN+ LY+ RNG L+ AAA+FTR LA LR ++PY
Sbjct: 39 SDKLIMAVSGESGDTTQFSEYIGKNIQLYKMRNGYELSPKAAASFTRRNLADYLRSRTPY 98
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN+L+AGYD +GP LY+IDY+A+ KV AA GYG +FSLS++DR+ + EEA
Sbjct: 99 FVNLLMAGYDVNSGPELYFIDYLASCVKVPYAAHGYGGFFSLSILDRYHKYDSTEEEAYI 158
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L+ KC+ EI RL+V PNF ++ V K+G +E
Sbjct: 159 LLKKCVREIHKRLIVNLPNFKVQKVSKEGIKE 190
>gi|395327253|gb|EJF59654.1| N-terminal nucleophile aminohydrolase [Dichomitus squalens LYAD-421
SS1]
Length = 194
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 106/155 (68%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL H L+A SGEPGD VQF E++++N+ LYQ RN L +AA++ R LA +LR +
Sbjct: 37 VLSPHLLMAYSGEPGDTVQFAEYVERNIRLYQIRNTHALRPPSAASWIRRTLADSLRSRK 96
Query: 61 PYMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+L+ GYD T P LY+IDY+ T+ +V AA GYG+YF+LS++DR+ SVEE
Sbjct: 97 PYAVNLLVGGYDTSTHNPHLYWIDYLGTMSEVPFAAHGYGAYFALSLLDRYHDPEASVEE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ + +CI E+ RLVV P + +KIVDKDG RE
Sbjct: 157 GLATLKRCIDEVAKRLVVNPEKYKVKIVDKDGVRE 191
>gi|242209688|ref|XP_002470690.1| predicted protein [Postia placenta Mad-698-R]
gi|220730267|gb|EED84127.1| predicted protein [Postia placenta Mad-698-R]
Length = 194
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 105/155 (67%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL H L+A SGEPGD +QF E++++N+ LYQ RN L +AA++ R LA +LR +
Sbjct: 37 VLSPHLLMAFSGEPGDTLQFAEYVERNIRLYQIRNTYALRPPSAASWIRRSLADSLRSRR 96
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+L+ GYD T P LY++DY+ TL V A GYGSYF LS++DR+ ++EE
Sbjct: 97 PYAVNLLIGGYDTSTSTPHLYWVDYLGTLSPVPFGAHGYGSYFGLSLLDRYHDPEATLEE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+D + +CI E+ RLVV+P + +KIVDKDG RE
Sbjct: 157 GLDTLRRCIDEVSKRLVVSPGKYKVKIVDKDGVRE 191
>gi|409047335|gb|EKM56814.1| hypothetical protein PHACADRAFT_254139 [Phanerochaete carnosa
HHB-10118-sp]
Length = 194
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 103/149 (69%), Gaps = 2/149 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+A SGEPGD VQF E+I++N+ LY RN PL +AA++ R LA +LR + PY VN+
Sbjct: 43 LMAYSGEPGDTVQFAEYIERNIRLYHIRNNFPLRPPSAASWIRRSLADSLRSRKPYSVNL 102
Query: 67 LLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
LL GYD T P LY++DY TL +V AA GYGSYF+LS++D++ +VEE + +
Sbjct: 103 LLGGYDTSTYMPHLYWMDYFGTLAEVPFAAHGYGSYFTLSLLDKYHDPEATVEEGIATLK 162
Query: 126 KCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+CI E+ RLVV+P F +KIVDKDG RE
Sbjct: 163 RCIDEVSKRLVVSPARFKVKIVDKDGVRE 191
>gi|223646410|gb|ACN09963.1| Proteasome subunit beta type-2 [Salmo salar]
gi|223672257|gb|ACN12310.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 200
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKN+ LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAG+D+ GP LYY+D+++ L K AA G+G+Y +LS++DR++ ++ +EAVDL+ K
Sbjct: 103 LLAGFDETDGPGLYYMDHLSALAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAVDLLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E+ R ++ P+F ++++DKDG +
Sbjct: 163 CVEELNYRFILNLPSFSVRLIDKDGIHD 190
>gi|209730324|gb|ACI66031.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 200
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKN+ LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLPCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAG+D+ GP LYY+D+++ L K AA G+G+Y +LS++DR++ ++ +EAVDL+ K
Sbjct: 103 LLAGFDETDGPGLYYMDHLSALAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAVDLLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E+ R ++ P+F ++++DKDG +
Sbjct: 163 CVEELNYRFILNLPSFSVRLIDKDGIHD 190
>gi|383864554|ref|XP_003707743.1| PREDICTED: proteasome subunit beta type-2-like [Megachile
rotundata]
Length = 207
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 105/152 (69%), Gaps = 2/152 (1%)
Query: 5 SHKLI-AASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS-PY 62
S KL+ A SG+ GD +QF+E+I KN+ LY+ RNG L+ AAA+FTR LA LR + PY
Sbjct: 39 SDKLVMAVSGQSGDTIQFSEYIGKNIQLYKMRNGYELSPKAAASFTRRNLADYLRSTTPY 98
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN+L+AGYD GP LY+IDY+A+ +V AA GYG +FSLS++DR+ + EEA
Sbjct: 99 FVNLLMAGYDNNNGPELYFIDYLASCVRVPYAAHGYGGFFSLSILDRYHKYDSTEEEAYI 158
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L+ KC+ EI RL+V PNF ++ V KDG +E
Sbjct: 159 LMKKCVREIHKRLIVNLPNFKVQKVSKDGIKE 190
>gi|224006532|ref|XP_002292226.1| proteasome subunit beta type 4 [Thalassiosira pseudonana CCMP1335]
gi|220971868|gb|EED90201.1| proteasome subunit beta type 4 [Thalassiosira pseudonana CCMP1335]
Length = 176
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 104/158 (65%), Gaps = 3/158 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRN-GIPLTTAAAANFTRGELATALRKSP 61
L SH + SG D V F+E+I KN+ LY+ N G+ L+T A ANF RGELA ALRK P
Sbjct: 12 LSSHSAMGVSGPNCDLVNFSEYISKNLKLYELSNDGVQLSTHAQANFCRGELAKALRKGP 71
Query: 62 YMVNILLAGYDKE--TGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
+ VN++L GYD + G SLY +DY+ + K + A GY S F LS+MDR + GM+ E+
Sbjct: 72 FQVNVILGGYDAKVPNGGSLYVMDYLGSCVKANYGAQGYASNFCLSIMDRDWDEGMTEEQ 131
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAW 157
AV LV+KCI E++ R ++ NF+ K++DKDG R ++
Sbjct: 132 AVTLVEKCIKELQMRFLINQSNFITKVIDKDGVRTLSY 169
>gi|336372669|gb|EGO01008.1| hypothetical protein SERLA73DRAFT_179029 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385526|gb|EGO26673.1| hypothetical protein SERLADRAFT_463954 [Serpula lacrymans var.
lacrymans S7.9]
Length = 194
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 106/154 (68%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
+ H L+A SGEPGD VQF EF+++N+ LYQ RN PL +AAA++ R LA +LR +SP
Sbjct: 38 ISPHLLMAYSGEPGDTVQFAEFVERNIRLYQIRNLYPLRPSAAASWIRRSLADSLRSRSP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ GYD T P LY+IDY+ T V A GYGSYF+LS++DR+ S+EE
Sbjct: 98 YSVNLLVGGYDTATHEPKLYWIDYLGTQVDVPFGAHGYGSYFALSLLDRYHDPEASLEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ + +C+ E+ RLVV+P + +K+VDKDG RE
Sbjct: 158 LATLKRCVDEVAKRLVVSPGRYKVKVVDKDGVRE 191
>gi|449016393|dbj|BAM79795.1| 20S core proteasome subunit beta 4 [Cyanidioschyzon merolae strain
10D]
Length = 215
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 113/168 (67%), Gaps = 3/168 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LD +L++A G+ GD QFTE+IQ+NV LY+ R G L+T A+F RGELA ALR+ PY
Sbjct: 38 LDRFRLLSAGGDLGDVAQFTEYIQRNVHLYELRAGTSLSTRQIAHFIRGELARALRERPY 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+N++L GYD+ G SLYYIDY+ +LH + A GY +YF LS +DR + M++EEA++
Sbjct: 98 EINLILGGYDQGEGTSLYYIDYLGSLHMMKYTAQGYAAYFVLSTLDRLYRPNMNLEEALE 157
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR--EYAWRESVKDTPVSS 168
++ C+ E+ R ++ +F++KI D+ G R E A+ ++ TP SS
Sbjct: 158 VLRACLDEMGRRFLLKQRHFMVKIADERGVRVLENAFVDA-SGTPTSS 204
>gi|380015922|ref|XP_003691943.1| PREDICTED: proteasome subunit beta type-2-like [Apis florea]
Length = 207
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 105/152 (69%), Gaps = 2/152 (1%)
Query: 5 SHKLI-AASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPY 62
S KLI A SGE GD QF+E+I KN+ LY+ RNG L+ AAA FTR LA LR ++PY
Sbjct: 39 SDKLIMAVSGESGDTTQFSEYIGKNIQLYKMRNGYELSPKAAALFTRRNLADYLRSRTPY 98
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN+L+AGYD TGP LY+IDY+A+ KV A+ GYG +FSLS++DR+ + EEA
Sbjct: 99 FVNLLMAGYDDNTGPELYFIDYLASCVKVPYASHGYGGFFSLSILDRYHKYDSTEEEAYT 158
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L+ +C+ EI RL+V PNF ++ V K+G +E
Sbjct: 159 LMKRCVREIHKRLIVNLPNFKVQKVSKEGIKE 190
>gi|66519157|ref|XP_393468.2| PREDICTED: proteasome subunit beta type-2-like isoform 1 [Apis
mellifera]
Length = 207
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 105/152 (69%), Gaps = 2/152 (1%)
Query: 5 SHKLI-AASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPY 62
S KLI A SGE GD QF+E+I KN+ LY+ RNG L+ AAA FTR LA LR ++PY
Sbjct: 39 SDKLIMAVSGESGDTTQFSEYIGKNIQLYKMRNGYELSPKAAALFTRRNLADYLRSRTPY 98
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN+L+AGYD TGP LY+IDY+A+ KV A+ GYG +FSLS++DR+ + EEA
Sbjct: 99 FVNLLMAGYDDNTGPELYFIDYLASCVKVPYASHGYGGFFSLSILDRYHKYDSTEEEAYT 158
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L+ +C+ EI RL+V PNF ++ V K+G +E
Sbjct: 159 LMKRCVREIHKRLIVNLPNFKVQKVSKEGIKE 190
>gi|307198388|gb|EFN79330.1| Proteasome subunit beta type-2 [Harpegnathos saltator]
Length = 207
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 107/163 (65%), Gaps = 9/163 (5%)
Query: 1 MVLDSHKL--------IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGE 52
M D HK+ +A SGE GD QF+E+I KN+ LY+ RNG L+ AAA FTR
Sbjct: 28 MKSDEHKIHKISDKLVMATSGESGDTTQFSEYIGKNIQLYKMRNGYELSPKAAACFTRRN 87
Query: 53 LATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
LA LR ++PY VN+L+AGYD + GP LY+IDY+A+ KV A GYG FS+S++DR++
Sbjct: 88 LADYLRSRTPYFVNMLMAGYDDDAGPELYFIDYLASCVKVPYATHGYGGMFSMSVLDRYY 147
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ +EA L+ KC+ EI RL+V+ PNF ++ V KDG ++
Sbjct: 148 KHDCTEQEAYALLKKCVQEIHKRLIVSLPNFKVQKVSKDGIKD 190
>gi|226372926|gb|ACO52088.1| Proteasome subunit beta type-2 [Rana catesbeiana]
Length = 199
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 107/145 (73%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ +AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPSAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD GPSLYY+D++A L K AA GYG+ +LS++DR++ ++ EEAV+L+ +
Sbjct: 103 LLAGYDDHDGPSLYYMDHLAALAKAPFAAHGYGALLTLSILDRYYKPDLTREEAVELLKR 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
CI E++ R +++ P+F ++++DKDG
Sbjct: 163 CITELQKRFILSLPSFTVRVIDKDG 187
>gi|340507213|gb|EGR33212.1| proteasome subunit beta, putative [Ichthyophthirius multifiliis]
Length = 193
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LD +KL+A SGE R+QF+++I +N++L+++RNG PL T A+F R ELA +R PY
Sbjct: 38 LDENKLMAMSGESAYRLQFSDYIARNIALFKYRNGTPLNTQECASFIRSELAYGIRNGPY 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
MVN L+AG+D + P LY++DY+ TL K KAA GY ++F LS +D + ++++E ++
Sbjct: 98 MVNCLIAGFDYDQ-PQLYWVDYMGTLQKSVKAAHGYAAHFVLSTLDNFYKPELTLQEGIE 156
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREY 155
++ KC+ E+++R +++ NFV KIV K+G + Y
Sbjct: 157 IMKKCVHELKTRFLISQQNFVCKIVTKEGFQVY 189
>gi|389746431|gb|EIM87611.1| 20S proteasome subunit [Stereum hirsutum FP-91666 SS1]
Length = 197
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 109/158 (68%), Gaps = 5/158 (3%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
L H L+A SGEPGD V F E++++N+ LYQ RN PL +AA++ R LA +LR +
Sbjct: 37 TLTPHLLMAYSGEPGDTVHFAEYVERNLRLYQIRNVYPLRPQSAASWVRRSLAESLRSRH 96
Query: 61 PYMVNILLAGYDKETG----PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMS 116
PY VN+LL GYD + G P LY++DY+ T+ V AA GYGSYF+LS++DR+ + +
Sbjct: 97 PYSVNLLLGGYDTQAGEEGEPHLYWLDYLGTMASVPFAAHGYGSYFALSLLDRYHNPDGT 156
Query: 117 VEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+EE +D++ + I E+ RLVV+P ++ +K+VDKDG RE
Sbjct: 157 LEEGLDVLRRAIDEVAKRLVVSPGSYKVKVVDKDGIRE 194
>gi|322801573|gb|EFZ22229.1| hypothetical protein SINV_11095 [Solenopsis invicta]
Length = 207
Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 108/163 (66%), Gaps = 9/163 (5%)
Query: 1 MVLDSHKL--------IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGE 52
M D HK+ +A SGE GD QF+E+I KN+ LY+ RNG L+ AAA FTR
Sbjct: 28 MKSDEHKIHKISDKLVMAISGESGDTTQFSEYIGKNIQLYKMRNGYELSPKAAACFTRRN 87
Query: 53 LATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
LA LR ++PY VN+LLAGYD ++GP LY+IDY+A+ +V A GYG FS+S++DR++
Sbjct: 88 LADYLRSRTPYFVNMLLAGYDDDSGPELYFIDYLASCVRVPYATHGYGGMFSMSVLDRYY 147
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ EEA L+ KC+ EI+ RL+V PNF ++ + KDG ++
Sbjct: 148 KYDCTEEEAYVLLKKCVREIQKRLIVNLPNFKVQKISKDGIKD 190
>gi|123382702|ref|XP_001298721.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121879369|gb|EAX85791.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 191
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 104/149 (69%), Gaps = 2/149 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LD +A SGE GD +Q +EF+Q NV+LY+FRNG+ L++ A A+F R +A A+RKSPY
Sbjct: 38 LDDRHALAMSGETGDCLQLSEFLQGNVALYKFRNGVELSSDALAHFIRHTMAKAVRKSPY 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN+LL+GYD + P LY++DY+ TL + A GY YF +S+ D+HF GM++EE +
Sbjct: 98 EVNMLLSGYDGK--PHLYFMDYLGTLQSIPYGAQGYCQYFVMSVFDKHFKEGMTLEEGKE 155
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
L+ + +I+ R VAP F++K+VDK+G
Sbjct: 156 LMKLALNQIKQRFTVAPHGFIVKLVDKNG 184
>gi|145355044|ref|XP_001421781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582019|gb|ABP00075.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 217
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LDS K++A SG GD V F E+++ NV LY+ + G L +A A++ R ELA ALR PY
Sbjct: 38 LDSTKIMALSGPKGDCVAFGEYLRANVRLYRLKYGHELDVSATAHYARNELAEALRSGPY 97
Query: 63 MVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
VN LLAG+DK + P L+++DY+AT H+V+ GYG F LS+ D+H+ MS +A+
Sbjct: 98 QVNCLLAGFDKLKNEPELHFMDYLATCHRVNTGGHGYGGMFCLSLFDKHWVPNMSRAQAM 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGA 152
DLVD C+ E+ RLV AP ++++KIVDK+G
Sbjct: 158 DLVDLCVGEVCERLVTAPTDYLVKIVDKNGC 188
>gi|8394079|ref|NP_058980.1| proteasome subunit beta type-2 [Rattus norvegicus]
gi|730377|sp|P40307.1|PSB2_RAT RecName: Full=Proteasome subunit beta type-2; AltName:
Full=Macropain subunit C7-I; AltName:
Full=Multicatalytic endopeptidase complex subunit C7-I;
AltName: Full=Proteasome component C7-I
gi|436781|dbj|BAA04823.1| proteasome subunit RC7-I [Rattus sp.]
gi|34849630|gb|AAH58487.1| Proteasome (prosome, macropain) subunit, beta type 2 [Rattus
norvegicus]
gi|149023966|gb|EDL80463.1| proteasome (prosome, macropain) subunit, beta type 2 [Rattus
norvegicus]
gi|737261|prf||1922244A proteasome:SUBUNIT=RC7-I
Length = 201
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++++DKDG
Sbjct: 163 CLEELQKRFILNLPTFSVRVIDKDG 187
>gi|169601414|ref|XP_001794129.1| hypothetical protein SNOG_03572 [Phaeosphaeria nodorum SN15]
gi|160705926|gb|EAT88777.2| hypothetical protein SNOG_03572 [Phaeosphaeria nodorum SN15]
Length = 203
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L++H L+ SGE GD VQF EFIQ N+ LY RNG+ L+ AA ANF RGELATALR + P
Sbjct: 38 LNTHTLMTFSGEAGDTVQFAEFIQANIQLYSMRNGMELSPAATANFVRGELATALRSRRP 97
Query: 62 YMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL GYD P+LY+IDY+A+L V AA GY Y+ LS++D+H H + E+
Sbjct: 98 YTVNLLLGGYDSIADKPTLYWIDYLASLAPVPYAAHGYAQYYCLSLLDKHHHPDIDYEQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK 162
+ ++ C E++ RL + +K++ KDG ++ + + K
Sbjct: 158 IKIMRMCTEELKRRLPIDFKGVFVKVITKDGIKDVEYEDDGK 199
>gi|384485141|gb|EIE77321.1| hypothetical protein RO3G_02025 [Rhizopus delemar RA 99-880]
Length = 194
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L++H ++ SGEPGD V F E+IQ+N+ LY RNGI L+ A A FTR ELA +LR + P
Sbjct: 38 LNAHTVLLYSGEPGDTVNFAEYIQRNIKLYGIRNGIELSPKATATFTRRELADSLRSRHP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+++ GYD K+ LY+IDY+ + + A GYG+YF S+MDRH+ MSV+EA
Sbjct: 98 YSVNLIVGGYDVKKQKSELYWIDYLGAMASLPFCAQGYGAYFCTSLMDRHYKEDMSVDEA 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
L+ CI E+++R +V PNF +DKDG
Sbjct: 158 KTLMKMCIQELKTRFIVNLPNFKTTFIDKDG 188
>gi|392560502|gb|EIW53685.1| N-terminal nucleophile aminohydrolase [Trametes versicolor
FP-101664 SS1]
Length = 194
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 106/155 (68%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL H L+A SGEPGD VQF E+I++N+ LYQ RN L +AA++ R LA +LR +
Sbjct: 37 VLSPHLLMAFSGEPGDTVQFAEYIERNIRLYQIRNTYALRPPSAASWIRRALADSLRSRR 96
Query: 61 PYMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+L+ GYD T P LY++DY+ T+ +V AA GYG+YF+LS++DR+ S+EE
Sbjct: 97 PYSVNLLVGGYDTSTHTPHLYWVDYLGTMSEVPFAAHGYGAYFALSLLDRYHDPEASLEE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ + +C+ E+ RLVV P + +K+VDKDG RE
Sbjct: 157 GLATLRRCLDEVAKRLVVTPEKYKVKVVDKDGVRE 191
>gi|227116345|ref|NP_036100.3| proteasome subunit beta type-2 [Mus musculus]
gi|9910832|sp|Q9R1P3.1|PSB2_MOUSE RecName: Full=Proteasome subunit beta type-2; AltName:
Full=Macropain subunit C7-I; AltName:
Full=Multicatalytic endopeptidase complex subunit C7-I;
AltName: Full=Proteasome component C7-I
gi|378792312|pdb|3UNB|J Chain J, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792326|pdb|3UNB|X Chain X, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792340|pdb|3UNB|LL Chain l, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792354|pdb|3UNB|ZZ Chain z, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792368|pdb|3UNE|J Chain J, Mouse Constitutive 20s Proteasome
gi|378792382|pdb|3UNE|X Chain X, Mouse Constitutive 20s Proteasome
gi|378792396|pdb|3UNE|LL Chain l, Mouse Constitutive 20s Proteasome
gi|378792410|pdb|3UNE|ZZ Chain z, Mouse Constitutive 20s Proteasome
gi|378792424|pdb|3UNF|J Chain J, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792438|pdb|3UNF|X Chain X, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792452|pdb|3UNH|J Chain J, Mouse 20s Immunoproteasome
gi|378792466|pdb|3UNH|X Chain X, Mouse 20s Immunoproteasome
gi|5757657|gb|AAD50535.1|AF060090_1 proteasome subunit C7-I [Mus musculus]
gi|14198410|gb|AAH08265.1| Proteasome (prosome, macropain) subunit, beta type 2 [Mus musculus]
gi|148698332|gb|EDL30279.1| proteasome (prosome, macropain) subunit, beta type 2 [Mus musculus]
Length = 201
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++++DKDG
Sbjct: 163 CLEELQKRFILNLPTFSVRVIDKDG 187
>gi|121511942|gb|ABM55422.1| proteasome beta 2 subunit-like protein [Xenopsylla cheopis]
Length = 200
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 102/147 (69%), Gaps = 1/147 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
++ +GE GD QF E+I KN+ LY+ RNG ++T +AANFTR LA ALR ++ Y VN+
Sbjct: 43 VMGINGESGDTTQFAEYIAKNIQLYKMRNGYSVSTVSAANFTRRNLADALRSRNAYHVNM 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+ G+DKE GP LY++DY+ + A GYG +FSLS+MDR++ S MS EEA ++ +
Sbjct: 103 LIGGHDKEGGPQLYFMDYLGACVSLPYACHGYGGFFSLSIMDRYYRSDMSQEEAYAIIKR 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGAR 153
CI EI RL++ PNF + +VD++G +
Sbjct: 163 CISEIHKRLIINLPNFKVVVVDENGIK 189
>gi|26347309|dbj|BAC37303.1| unnamed protein product [Mus musculus]
Length = 201
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++++DKDG
Sbjct: 163 CLEELQKRFILNLPTFSVRVIDKDG 187
>gi|344287599|ref|XP_003415540.1| PREDICTED: proteasome subunit beta type-2-like isoform 2 [Loxodonta
africana]
Length = 176
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 18 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 77
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 78 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 137
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ P F ++I+DK+G E
Sbjct: 138 CLEELQKRFILNLPTFSVRIIDKNGIHE 165
>gi|338721985|ref|XP_003364457.1| PREDICTED: proteasome subunit beta type-2-like isoform 2 [Equus
caballus]
Length = 176
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 18 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 77
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 78 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 137
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ P F ++I+DK+G E
Sbjct: 138 CLEELQKRFILNLPAFSVRIIDKNGIHE 165
>gi|344287597|ref|XP_003415539.1| PREDICTED: proteasome subunit beta type-2-like isoform 1 [Loxodonta
africana]
Length = 201
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ P F ++I+DK+G E
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDKNGIHE 190
>gi|149694067|ref|XP_001503726.1| PREDICTED: proteasome subunit beta type-2-like isoform 1 [Equus
caballus]
Length = 201
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ P F ++I+DK+G E
Sbjct: 163 CLEELQKRFILNLPAFSVRIIDKNGIHE 190
>gi|392870119|gb|EAS27280.2| proteasome component Pre1 [Coccidioides immitis RS]
Length = 205
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 107/168 (63%), Gaps = 2/168 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H LIA SGE GD VQF E+IQ N LY RN L+ +A ANF RGELA +LR +SP
Sbjct: 38 LNKHTLIAYSGEAGDTVQFAEYIQANAQLYSMRNETELSPSAVANFVRGELARSLRSRSP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H +S EE
Sbjct: 98 YTVNLLLGGVDPITQKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISYEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSS 168
+ L++KC E++ RL + +K+V KDG E + S VS+
Sbjct: 158 LKLLEKCTDELKRRLPIDFKGVFVKVVTKDGINEVDFDSSNNKQVVSA 205
>gi|357624159|gb|EHJ75038.1| hypothetical protein KGM_19166 [Danaus plexippus]
Length = 205
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 102/151 (67%), Gaps = 2/151 (1%)
Query: 5 SHKLI-AASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS-PY 62
S KL+ G+ GD QF E+I KN+ LY+ RNG L +AAANFTR LA LR S PY
Sbjct: 44 SDKLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAANFTRRNLAEYLRSSTPY 103
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN+L+ GYDKE GP LY++DY+A+ KV AA G+G Y SLS+MDR+ + EEA +
Sbjct: 104 FVNLLMGGYDKENGPELYFMDYLASSMKVPFAAHGFGGYLSLSIMDRYHKKDATEEEAYE 163
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
++ KC+ E+ RL V+ PNF + +V++DG +
Sbjct: 164 ILKKCVQEVHKRLFVSLPNFQVTVVNRDGIK 194
>gi|32401291|gb|AAP80818.1| proteasome chain protein [Griffithsia japonica]
Length = 187
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 98/138 (71%), Gaps = 3/138 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LD KL AA+G PGD +F+E +QK+V LY R+GI ++TAA AN+TRGELA LR+SP+
Sbjct: 39 LDEGKLFAAAGVPGDVTKFSEHVQKDVRLYSLRSGISMSTAAVANYTRGELAHFLRRSPF 98
Query: 63 MVNILLAGYDKE---TGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
N+++ GYDK GPSLY DY+ TL K+ AA GY YF LS +DR++ GMS++E
Sbjct: 99 QCNVIIGGYDKAPNGDGPSLYSCDYLGTLTKLTFAAEGYAQYFVLSTLDRYWKKGMSLDE 158
Query: 120 AVDLVDKCILEIRSRLVV 137
+D + KCI E++ RLV+
Sbjct: 159 GLDAIRKCIAEVQKRLVL 176
>gi|303314849|ref|XP_003067433.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240107101|gb|EER25288.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320037788|gb|EFW19725.1| proteasome component Pre1 [Coccidioides posadasii str. Silveira]
Length = 205
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 108/168 (64%), Gaps = 2/168 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N LY RN L+ +A ANF RGELA +LR +SP
Sbjct: 38 LNKHTLLAYSGEAGDTVQFAEYIQANAQLYSMRNETELSPSAVANFVRGELARSLRSRSP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H +S EE
Sbjct: 98 YTVNLLLGGVDPITQKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISYEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSS 168
+ L++KC E++ RL + +K+V KDG +E + S VS+
Sbjct: 158 LKLLEKCTDELKRRLPIDFKGVFVKVVTKDGIKEVDFDSSNNKQVVSA 205
>gi|118101652|ref|XP_417777.2| PREDICTED: proteasome subunit beta type-2 isoform 2 [Gallus gallus]
Length = 201
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD GP+LYY+DY+A L K AA GYG++ +LS++DR++ G++ EEAV+L+ K
Sbjct: 103 LLAGYDDHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPGITREEAVELLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R V+ +F + +DKDG E
Sbjct: 163 CLEELQKRFVLNLTSFNARFIDKDGIHE 190
>gi|393233954|gb|EJD41521.1| proteasome component Pre1 [Auricularia delicata TFB-10046 SS5]
Length = 194
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L+ SGEPGD VQF E++++N+ LYQ RN L +AA++ R LA +LR +SP
Sbjct: 38 LSPHLLMTYSGEPGDTVQFAEYVERNLRLYQIRNHHALRPHSAASWIRRTLADSLRSRSP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ GYD E P LY+IDY+ T+ V AA GYGSYF+LS++DR+ + S+EE
Sbjct: 98 YSVNLLVGGYDTSEHQPHLYWIDYLGTMATVPFAAHGYGSYFALSLLDRYHNPDASLEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++++ +CI E++ RL+V F +++VDKDG RE
Sbjct: 158 IEVLKRCIDEVQKRLIVGLGKFKVRVVDKDGVRE 191
>gi|332248604|ref|XP_003273454.1| PREDICTED: proteasome subunit beta type-2 isoform 3 [Nomascus
leucogenys]
gi|345780639|ref|XP_003432018.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Canis lupus
familiaris]
gi|426328915|ref|XP_004025492.1| PREDICTED: proteasome subunit beta type-2 isoform 3 [Gorilla
gorilla gorilla]
Length = 167
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 9 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 68
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 69 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 128
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++I+DK+G
Sbjct: 129 CLEELQKRFILNLPTFSVRIIDKNG 153
>gi|157128593|ref|XP_001655145.1| proteasome subunit beta type [Aedes aegypti]
gi|108882209|gb|EAT46434.1| AAEL002401-PA [Aedes aegypti]
Length = 206
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 111/164 (67%), Gaps = 3/164 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
++A GE GDRVQFTE+I KN+ LY+ RNG L +AA+FTR LA LR ++PY VN+
Sbjct: 43 MMATIGEAGDRVQFTEYISKNILLYKMRNGYELGPKSAAHFTRKNLADYLRSRTPYQVNV 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+ GYD+ G L+YIDY+A V AA GYG F S++DR+ H+ ++ +EA +++ K
Sbjct: 103 LVGGYDEADGAQLHYIDYLANSLPVKYAAHGYGGLFVSSILDRYHHAKITQDEAYEILKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGAREYA--WRESVKDTPVSS 168
+ EI+ RL++ PNF + ++DKDG +E ES+K+ PV++
Sbjct: 163 GVAEIQKRLIINLPNFKVSVIDKDGIKELKDITAESLKEEPVAA 206
>gi|363742288|ref|XP_003642616.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Gallus gallus]
Length = 176
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 18 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 77
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD GP+LYY+DY+A L K AA GYG++ +LS++DR++ G++ EEAV+L+ K
Sbjct: 78 LLAGYDDHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPGITREEAVELLKK 137
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R V+ +F + +DKDG E
Sbjct: 138 CLEELQKRFVLNLTSFNARFIDKDGIHE 165
>gi|291408818|ref|XP_002720739.1| PREDICTED: proteasome beta 2 subunit [Oryctolagus cuniculus]
Length = 201
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S + AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRDRAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ P F ++I+DKDG +
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDKDGIHD 190
>gi|119175368|ref|XP_001239925.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 787
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 102/154 (66%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H LIA SGE GD VQF E+IQ N LY RN L+ +A ANF RGELA +LR +SP
Sbjct: 17 LNKHTLIAYSGEAGDTVQFAEYIQANAQLYSMRNETELSPSAVANFVRGELARSLRSRSP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H +S EE
Sbjct: 77 YTVNLLLGGVDPITQKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISYEEG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L++KC E++ RL + +K+V KDG E
Sbjct: 137 LKLLEKCTDELKRRLPIDFKGVFVKVVTKDGINE 170
>gi|30585195|gb|AAP36870.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 2
[synthetic construct]
gi|61372329|gb|AAX43824.1| proteasome subunit beta type 2 [synthetic construct]
Length = 202
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++I+DK+G
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDKNG 187
>gi|212537603|ref|XP_002148957.1| proteasome component Pre1, putative [Talaromyces marneffei ATCC
18224]
gi|210068699|gb|EEA22790.1| proteasome component Pre1, putative [Talaromyces marneffei ATCC
18224]
Length = 203
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGEPGD VQF E+IQ NV LY RN L+ AA NF RGELA ALR ++P
Sbjct: 38 LNQHTLMAFSGEPGDGVQFAEYIQANVQLYSMRNDTELSPAAVGNFVRGELARALRSRNP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H + +E+
Sbjct: 98 YTVNLLLGGVDAITNTPSLYWVDYLASLAEVPYAAHGYAQYYCLSILDKHHHPDIDLEQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK 162
+ L++ C E++ RL + ++K+V KDG E + K
Sbjct: 158 LKLLNLCTDELKRRLPIDFKGVLVKVVTKDGIEEINYDNERK 199
>gi|315139006|ref|NP_001186708.1| proteasome subunit beta type-2 isoform 2 [Homo sapiens]
gi|332248602|ref|XP_003273453.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Nomascus
leucogenys]
gi|345780641|ref|XP_003432019.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Canis lupus
familiaris]
gi|397482834|ref|XP_003812621.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Pan paniscus]
gi|402853903|ref|XP_003891627.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Papio anubis]
gi|410966768|ref|XP_003989901.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Felis catus]
gi|426328913|ref|XP_004025491.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Gorilla
gorilla gorilla]
gi|119627813|gb|EAX07408.1| proteasome (prosome, macropain) subunit, beta type, 2, isoform
CRA_b [Homo sapiens]
gi|221041574|dbj|BAH12464.1| unnamed protein product [Homo sapiens]
Length = 176
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 18 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 77
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 78 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 137
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++I+DK+G
Sbjct: 138 CLEELQKRFILNLPTFSVRIIDKNG 162
>gi|345780637|ref|XP_532564.3| PREDICTED: proteasome subunit beta type-2 isoform 3 [Canis lupus
familiaris]
gi|410966766|ref|XP_003989900.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Felis catus]
Length = 201
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++I+DK+G
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDKNG 187
>gi|351714187|gb|EHB17106.1| Proteasome subunit beta type-2 [Heterocephalus glaber]
Length = 201
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++I+DK+G
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDKNG 187
>gi|395830216|ref|XP_003788230.1| PREDICTED: proteasome subunit beta type-2 [Otolemur garnettii]
Length = 201
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S ++AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRDKAVELLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ P F ++I+DK G E
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDKSGIHE 190
>gi|4506195|ref|NP_002785.1| proteasome subunit beta type-2 isoform 1 [Homo sapiens]
gi|350534414|ref|NP_001233318.1| proteasome subunit beta type-2 [Pan troglodytes]
gi|383872756|ref|NP_001244354.1| proteasome subunit beta type-2 [Macaca mulatta]
gi|296207459|ref|XP_002750652.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Callithrix
jacchus]
gi|332248600|ref|XP_003273452.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Nomascus
leucogenys]
gi|397482832|ref|XP_003812620.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Pan paniscus]
gi|402853901|ref|XP_003891626.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Papio anubis]
gi|426328911|ref|XP_004025490.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Gorilla
gorilla gorilla]
gi|441633910|ref|XP_004089796.1| PREDICTED: proteasome subunit beta type-2 [Nomascus leucogenys]
gi|1709762|sp|P49721.1|PSB2_HUMAN RecName: Full=Proteasome subunit beta type-2; AltName:
Full=Macropain subunit C7-I; AltName:
Full=Multicatalytic endopeptidase complex subunit C7-I;
AltName: Full=Proteasome component C7-I
gi|21465652|pdb|1IRU|K Chain K, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465666|pdb|1IRU|Y Chain Y, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|565649|dbj|BAA05646.1| proteasome subunit HsC7-I [Homo sapiens]
gi|30583113|gb|AAP35801.1| proteasome (prosome, macropain) subunit, beta type, 2 [Homo
sapiens]
gi|48145841|emb|CAG33143.1| PSMB2 [Homo sapiens]
gi|60655289|gb|AAX32208.1| proteasome subunit beta type 2 [synthetic construct]
gi|75517958|gb|AAI01837.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Homo
sapiens]
gi|79160069|gb|AAI07902.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Homo
sapiens]
gi|85397257|gb|AAI05127.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Homo
sapiens]
gi|119627811|gb|EAX07406.1| proteasome (prosome, macropain) subunit, beta type, 2, isoform
CRA_a [Homo sapiens]
gi|119627812|gb|EAX07407.1| proteasome (prosome, macropain) subunit, beta type, 2, isoform
CRA_a [Homo sapiens]
gi|123993727|gb|ABM84465.1| proteasome (prosome, macropain) subunit, beta type, 2 [synthetic
construct]
gi|208967172|dbj|BAG73600.1| proteasome (prosome, macropain) subunit, beta type, 2 [synthetic
construct]
gi|343958764|dbj|BAK63237.1| proteasome subunit beta type 2 [Pan troglodytes]
gi|355557813|gb|EHH14593.1| hypothetical protein EGK_00547 [Macaca mulatta]
gi|355745130|gb|EHH49755.1| hypothetical protein EGM_00466 [Macaca fascicularis]
gi|380785705|gb|AFE64728.1| proteasome subunit beta type-2 isoform 1 [Macaca mulatta]
gi|383412983|gb|AFH29705.1| proteasome subunit beta type-2 isoform 1 [Macaca mulatta]
gi|384944538|gb|AFI35874.1| proteasome subunit beta type-2 isoform 1 [Macaca mulatta]
gi|410215842|gb|JAA05140.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410256472|gb|JAA16203.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410303162|gb|JAA30181.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410303164|gb|JAA30182.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410303168|gb|JAA30184.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410303170|gb|JAA30185.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410303172|gb|JAA30186.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410340615|gb|JAA39254.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|1091574|prf||2021261B proteasome:SUBUNIT=HsC7-I
Length = 201
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++I+DK+G
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDKNG 187
>gi|326933067|ref|XP_003212631.1| PREDICTED: proteasome subunit beta type-2-like [Meleagris
gallopavo]
Length = 240
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 82 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 141
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD GP+LYY+DY+A L K AA GYG++ +LS++DR++ G++ EEAV+L+ K
Sbjct: 142 LLAGYDDHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPGITREEAVELLKK 201
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R V+ +F + +DKDG E
Sbjct: 202 CLEELQKRFVLNLTSFNARFIDKDGIHE 229
>gi|432883021|ref|XP_004074194.1| PREDICTED: proteasome subunit beta type-2-like [Oryzias latipes]
Length = 199
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ +AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPSAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD GP L+Y+DY+++L K AA GYG++ +LS++DR + ++ EEA++++ K
Sbjct: 103 LLAGYDDADGPGLFYMDYLSSLAKAPFAAHGYGAFLTLSILDRDYKPDLTREEAMNILRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E+ R ++ +F ++++DKDG +
Sbjct: 163 CVEELNKRFILNLHSFNVRLIDKDGIHD 190
>gi|209737686|gb|ACI69712.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 208
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 103/145 (71%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKN+ LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPKAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAG+D+ GP LYY+D+++ L K AA GYG+Y +LS++DR++ ++ +EAV L+ K
Sbjct: 103 LLAGFDETDGPGLYYMDHLSALAKAPFAAHGYGAYLTLSILDRYYRPDLTRDEAVGLLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E+ R ++ P+F ++++D +G
Sbjct: 163 CVEELNKRFILNLPSFSVRLIDTEG 187
>gi|403293115|ref|XP_003937568.1| PREDICTED: proteasome subunit beta type-2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 167
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 104/145 (71%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 9 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 68
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 69 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 128
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++I+DK G
Sbjct: 129 CLEELQKRFILNLPTFSVRIIDKSG 153
>gi|223646934|gb|ACN10225.1| Proteasome subunit beta type-2 [Salmo salar]
gi|223672797|gb|ACN12580.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 208
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 103/145 (71%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKN+ LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPKAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAG+D+ GP LYY+D+++ L K AA GYG+Y +LS++DR++ ++ +EAV L+ K
Sbjct: 103 LLAGFDETDGPGLYYMDHLSALAKAPFAAHGYGAYLTLSILDRYYRPDLTRDEAVGLLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E+ R ++ P+F ++++D +G
Sbjct: 163 CVEELNKRFILNLPSFSVRLIDTEG 187
>gi|395730768|ref|XP_003775786.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Pongo abelii]
Length = 176
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 18 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 77
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 78 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 137
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++++DK+G
Sbjct: 138 CLEELQKRFILNLPTFSVRVIDKNG 162
>gi|403293113|ref|XP_003937567.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 176
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 104/145 (71%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 18 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 77
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 78 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 137
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++I+DK G
Sbjct: 138 CLEELQKRFILNLPTFSVRIIDKSG 162
>gi|242808715|ref|XP_002485222.1| proteasome component Pre1, putative [Talaromyces stipitatus ATCC
10500]
gi|218715847|gb|EED15269.1| proteasome component Pre1, putative [Talaromyces stipitatus ATCC
10500]
Length = 203
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L+A SGEPGD VQF E+IQ NV LY RN L+ AA NF RGELA ALR ++P
Sbjct: 38 LSQHTLMAFSGEPGDGVQFAEYIQANVQLYSMRNDSELSPAAVGNFVRGELARALRSRNP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H + +E+
Sbjct: 98 YTVNLLLGGVDAITNTPSLYWVDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDIELEQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L++ C E++ RL + ++K+V KDG +E
Sbjct: 158 LKLLNLCTDELKRRLPIDFKGVLVKVVTKDGIQE 191
>gi|194766351|ref|XP_001965288.1| GF24340 [Drosophila ananassae]
gi|190617898|gb|EDV33422.1| GF24340 [Drosophila ananassae]
Length = 205
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 103/148 (69%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
LI+ GE GD QFTEFI KN++LY+ RNG L+ AAA+FTR LA LR ++PY V +
Sbjct: 43 LISTIGESGDTEQFTEFISKNIALYKMRNGYDLSPHAAAHFTRKNLAEYLRSRTPYQVFM 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
+AGYD GP L +IDY+A+ V+ A GYG+ F+ S+ DR++H ++ +EA D++ K
Sbjct: 103 FVAGYDPNDGPELTFIDYLASAKSVNYAGHGYGAIFASSIYDRYWHPKITQDEAYDVLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C++EI+ RLV+ PNF + +VDKDG +
Sbjct: 163 CVVEIQKRLVINLPNFNVSVVDKDGVKN 190
>gi|343425240|emb|CBQ68776.1| probable multicatalytic endopeptidase complex chain PRE1
[Sporisorium reilianum SRZ2]
Length = 194
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 108/154 (70%), Gaps = 2/154 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL H ++ SGEPGD +QF+E+I++N LY RN + L +AA++ R +LA +LR ++
Sbjct: 37 VLSDHLVMTYSGEPGDTLQFSEWIERNSKLYSIRNHVELRPKSAASWIRKQLAESLRSRN 96
Query: 61 PYMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL G+D + P+LY+IDY+ TL V AA GYG++F++S +DR+ MS+EE
Sbjct: 97 PYQVNLLLGGFDLPSSEPALYWIDYLGTLATVPFAAHGYGAFFAMSTLDRYHRPDMSLEE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+DL+ KCI E++ R +V F +++VD+DGAR
Sbjct: 157 GLDLLRKCINELKQRFIVDLGTFTVRVVDRDGAR 190
>gi|297665553|ref|XP_002811111.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Pongo abelii]
Length = 201
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++++DK+G
Sbjct: 163 CLEELQKRFILNLPTFSVRVIDKNG 187
>gi|390604826|gb|EIN14217.1| N-terminal nucleophile aminohydrolase [Punctularia strigosozonata
HHB-11173 SS5]
Length = 194
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 104/155 (67%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL H + SGEPGD VQF E+I++N+ LYQ RN LT +AA + R LA ++R +
Sbjct: 37 VLTPHLCMTYSGEPGDTVQFAEYIERNLRLYQIRNYFALTPPSAAAWIRRSLAESIRSRK 96
Query: 61 PYMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL GYD T P LY+IDY+ T+ V AA GYGSYF+LS++DR+ +++E
Sbjct: 97 PYAVNLLLGGYDTTTHTPHLYWIDYLGTMATVPFAAHGYGSYFALSLLDRYHDPEATLDE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ + +CI E+ RLVV+P + +K++DKDG RE
Sbjct: 157 GLATLKRCIDEVAKRLVVSPEKYKVKVIDKDGVRE 191
>gi|299470780|emb|CBN79826.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 218
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 105/155 (67%), Gaps = 4/155 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
L +K +A +G D V FTE+I KN++LY+ N + LTT AAA F RGELA ALRK P+
Sbjct: 38 LADNKALACAGPQSDCVSFTEYISKNMALYELNNDVKLTTKAAATFIRGELAKALRKGPF 97
Query: 63 MVNILLAGYDK-ETG---PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
+L+ G DK E G SL+++DY+ TL KV A GYG+ F+LS+MDR + G+S++
Sbjct: 98 QTQLLMGGVDKREAGKDEASLFWLDYLGTLQKVPYGAHGYGAAFTLSVMDREYVKGLSLD 157
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
EA+ ++D CI E+ +R ++A NFVIK+V +G +
Sbjct: 158 EALGIIDNCIKELHTRFLIAQKNFVIKVVTAEGIK 192
>gi|449273111|gb|EMC82719.1| Proteasome subunit beta type-2 [Columba livia]
Length = 183
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 112/163 (68%), Gaps = 7/163 (4%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 25 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 84
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ ++ EEA++L+ K
Sbjct: 85 LLAGYDEHDGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPSITREEAMELLKK 144
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 169
C+ E++ R ++ +F + +DKDG E V++ P+S A
Sbjct: 145 CLEELQKRFILNLASFNARFIDKDGIHE------VENIPLSKA 181
>gi|403293111|ref|XP_003937566.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 201
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 104/145 (71%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++I+DK G
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDKSG 187
>gi|417408837|gb|JAA50954.1| Putative proteasome subunit beta type-2 isoform 1, partial
[Desmodus rotundus]
Length = 229
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 104/145 (71%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 71 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 130
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 131 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPTISREMAVELLRK 190
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++I+DK G
Sbjct: 191 CLEELQKRFILNLPTFSVRIIDKHG 215
>gi|348571343|ref|XP_003471455.1| PREDICTED: proteasome subunit beta type-2-like isoform 2 [Cavia
porcellus]
Length = 176
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 107/148 (72%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 18 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 77
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S ++AV+L+ K
Sbjct: 78 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRDKAVELLRK 137
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ P F ++I+DK+G +
Sbjct: 138 CLEELQKRFILNLPTFSVRIIDKNGIHD 165
>gi|308812780|ref|XP_003083697.1| 20S proteasome beta 4 subunit (ISS) [Ostreococcus tauri]
gi|116055578|emb|CAL58246.1| 20S proteasome beta 4 subunit (ISS) [Ostreococcus tauri]
Length = 767
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP 61
V+D K++A SG GD V F E++ NV LY+ + L A A++ R ELATALRK P
Sbjct: 37 VVDGTKIMATSGPRGDCVAFAEYVAANVRLYRLKYQHELDVKATAHYARNELATALRKGP 96
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y VN LLAG D GP LY++DY+AT H+V+ GYG F LS+ D+H+ MS +A+
Sbjct: 97 YQVNALLAGVDA-NGPELYFMDYLATCHRVNTGGHGYGGMFCLSLFDKHWVPNMSRAQAM 155
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+LVD C+ E+ RLV AP +++KIVDK G
Sbjct: 156 ELVDLCVAEVCERLVTAPTEYLVKIVDKKG 185
>gi|348571341|ref|XP_003471454.1| PREDICTED: proteasome subunit beta type-2-like isoform 1 [Cavia
porcellus]
Length = 201
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 107/148 (72%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S ++AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRDKAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ P F ++I+DK+G +
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDKNGIHD 190
>gi|397609474|gb|EJK60384.1| hypothetical protein THAOC_19273 [Thalassiosira oceanica]
Length = 266
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRN-GIPLTTAAAANFTRGELATALRKSP 61
L SH + SG D V F+E++ KN+ L + N G L+T A ANF RGELA A+RK P
Sbjct: 104 LSSHSAMGVSGPNCDLVNFSEYVSKNLKLIELSNDGQKLSTHAQANFCRGELAKAIRKGP 163
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y VNI+L GYD++ G S+Y +DY+ + K + A GY S F LS+MDR + GM+ E+AV
Sbjct: 164 YQVNIILGGYDEKKGGSMYVMDYMGSCVKQNYGAQGYASNFCLSIMDRDWDEGMNEEQAV 223
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+V+ CI E++ R ++ NF+IK++DK+G R
Sbjct: 224 KVVEHCIQELKMRFLINQSNFIIKVIDKEGVR 255
>gi|169773719|ref|XP_001821328.1| proteasome subunit beta type-2 [Aspergillus oryzae RIB40]
gi|238491732|ref|XP_002377103.1| proteasome component Pre1, putative [Aspergillus flavus NRRL3357]
gi|83769189|dbj|BAE59326.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697516|gb|EED53857.1| proteasome component Pre1, putative [Aspergillus flavus NRRL3357]
Length = 203
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N+ LY RN L A ANF RGELA +LR +SP
Sbjct: 38 LNKHSLMAFSGEAGDTVQFAEYIQANIQLYTMRNDTELGPNAVANFVRGELARSLRSRSP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LLAG D T P LY+IDY+A+L V AA GY Y+ LS +D+H H +S+EE
Sbjct: 98 YTVNLLLAGVDGITQKPHLYWIDYLASLAPVPYAAHGYAQYYCLSTLDKHHHPDISLEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L++ C E++ RL + ++K+V KDG RE
Sbjct: 158 LKLLEMCTDELKRRLPIDYKGVLVKVVTKDGVRE 191
>gi|389612321|dbj|BAM19664.1| proteasome subunit beta type [Papilio xuthus]
Length = 157
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS-PYMVNILLAGY 71
G+ GD QF E+I KN+ LY+ RNG L AAANFTR LA LR S PY VNIL+ GY
Sbjct: 5 GDSGDTTQFAEYIAKNIQLYKMRNGYELGPTAAANFTRRNLAEYLRSSSPYFVNILMGGY 64
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
D E GP LY++DY+A+ KV AA G+G Y SLS+MDR++ ++ +EA +++ KC+ E+
Sbjct: 65 DMENGPELYFMDYLASSIKVPFAAHGFGGYLSLSVMDRYYKKDLTEKEAYEILQKCVQEV 124
Query: 132 RSRLVVAPPNFVIKIVDKDG 151
RL V+ PNF + +V +DG
Sbjct: 125 HKRLFVSLPNFQVTVVKRDG 144
>gi|330914577|ref|XP_003296695.1| hypothetical protein PTT_06861 [Pyrenophora teres f. teres 0-1]
gi|311331036|gb|EFQ95202.1| hypothetical protein PTT_06861 [Pyrenophora teres f. teres 0-1]
Length = 261
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL++H L+ SGE GD VQF E+IQ NV LY RN + L+ AA ANF RGELA ALR +
Sbjct: 95 VLNTHTLMTFSGEAGDTVQFAEYIQANVQLYSMRNNMELSPAATANFVRGELARALRSRK 154
Query: 61 PYMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL GYD P+LY+IDY+A+ + AA GY Y+ LS++D+H H ++ E+
Sbjct: 155 PYTVNLLLGGYDTIADKPTLYWIDYLASQASLPYAAHGYAQYYCLSLLDKHHHPDINYEQ 214
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK 162
+ ++ C E++ RL + ++K++ KDG ++ + + VK
Sbjct: 215 GIKILRMCTEELKRRLPIDFKGVLVKVITKDGIKDVDYEDDVK 257
>gi|426215156|ref|XP_004001840.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Ovis aries]
Length = 176
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 106/145 (73%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 18 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 77
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E+AV+L+ K
Sbjct: 78 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISREKAVELLRK 137
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++I+D++G
Sbjct: 138 CLEELQKRFILNLPTFSVRIIDRNG 162
>gi|332017895|gb|EGI58555.1| Proteasome subunit beta type-2 [Acromyrmex echinatior]
Length = 207
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 105/163 (64%), Gaps = 9/163 (5%)
Query: 1 MVLDSHKL--------IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGE 52
M D HK+ +A SGE GD QF+E+I KN+ LY+ RNG L+ AAA FTR
Sbjct: 28 MKSDEHKIHKISDKLVMAISGESGDTTQFSEYIGKNIQLYKMRNGYELSPKAAACFTRRN 87
Query: 53 LATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
LA LR ++PY VN+LLAGYD + G LY+IDY+A+ KV A GYG FS+S++DR+
Sbjct: 88 LADYLRSRTPYFVNMLLAGYDDDLGAELYFIDYLASCVKVPYATHGYGGMFSMSVLDRYH 147
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ EEA L+ KC+ EI+ RL+V PNF ++ + KDG ++
Sbjct: 148 KYNCTEEEAYALLKKCVREIQKRLIVNLPNFKVQKISKDGIKD 190
>gi|257215971|emb|CAX83135.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
Length = 184
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 100/141 (70%), Gaps = 1/141 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L A GE GD QF+EFIQ+N+ LY+ RNG LT AAANFTR +A +LR +SPY VN+
Sbjct: 43 LAAVCGESGDTSQFSEFIQQNMQLYEIRNGYELTPNAAANFTRNNMAESLRSRSPYFVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+AG+D TGP LY++DY+A+L KV A GYG+ SLS++DR M+V+EAV L+
Sbjct: 103 LIAGFDSHTGPELYFLDYLASLIKVPFAVHGYGALVSLSILDRMHRPDMTVDEAVALLRL 162
Query: 127 CILEIRSRLVVAPPNFVIKIV 147
CI E++ RLV+ ++++IV
Sbjct: 163 CIQEVQKRLVINLDRYMVRIV 183
>gi|62751339|ref|NP_001015615.1| proteasome subunit beta type-2 [Bos taurus]
gi|426215154|ref|XP_004001839.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Ovis aries]
gi|75060936|sp|Q5E9K0.1|PSB2_BOVIN RecName: Full=Proteasome subunit beta type-2
gi|59858075|gb|AAX08872.1| proteasome beta 2 subunit [Bos taurus]
gi|59858205|gb|AAX08937.1| proteasome beta 2 subunit [Bos taurus]
gi|74354591|gb|AAI02368.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Bos taurus]
gi|296488894|tpg|DAA31007.1| TPA: proteasome subunit beta type-2 [Bos taurus]
gi|440908579|gb|ELR58582.1| Proteasome subunit beta type-2 [Bos grunniens mutus]
Length = 201
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 106/145 (73%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E+AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISREKAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++I+D++G
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDRNG 187
>gi|354477453|ref|XP_003500934.1| PREDICTED: proteasome subunit beta type-2-like [Cricetulus griseus]
gi|344244984|gb|EGW01088.1| Proteasome subunit beta type-2 [Cricetulus griseus]
Length = 201
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E A++L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERALELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++++DK+G
Sbjct: 163 CLDELQKRFILNLPTFSVRVIDKNG 187
>gi|198426046|ref|XP_002119550.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
type, 2 [Ciona intestinalis]
Length = 200
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 104/149 (69%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
L +++ +G+ GD QF+E+IQKN+ LY+ RNG ++T ANFTR LA ALRK+PY
Sbjct: 38 LGKSTIMSVTGDSGDSNQFSEYIQKNLQLYKMRNGYEMSTKGMANFTRKTLAEALRKNPY 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN+L+AG D + SLY++DY+A+ +V AA GYGSYF LS++DR ++ +EAV
Sbjct: 98 NVNLLMAGCDDSSDCSLYFMDYLASSVEVPFAAHGYGSYFVLSLLDRWHKPDLTRDEAVI 157
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
L+ KC+ E++ R +V P +I+IVDKDG
Sbjct: 158 LLRKCMEELKKRFIVNLPAVLIRIVDKDG 186
>gi|126643898|ref|XP_001388136.1| 20S proteasome beta subunit D2 (PBD2) [Cryptosporidium parvum Iowa
II]
gi|126117213|gb|EAZ51313.1| 20S proteasome beta subunit D2 (PBD2) , putative [Cryptosporidium
parvum Iowa II]
gi|323508735|dbj|BAJ77261.1| cgd1_420 [Cryptosporidium parvum]
gi|323509775|dbj|BAJ77780.1| cgd1_420 [Cryptosporidium parvum]
Length = 203
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 109/166 (65%), Gaps = 1/166 (0%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M +D +KLI G GDR+QF E+I+ N++LY+ RNG+ L+T A ANFTR ELA LR
Sbjct: 36 MEIDENKLIGVGGTLGDRMQFGEYIKCNLNLYRLRNGVQLSTTATANFTRNELAELLRSD 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
P+ VNIL+ GY KE G LY++D +A+L V+ AA GYG ++D+++ ++ EEA
Sbjct: 96 PHNVNILIGGYTKEEGAKLYWMDELASLGNVNNAAHGYGGLLVTGILDKYYKPNITQEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPV 166
+D++ KC E+++R +++ + +KIVD G + + E+ TPV
Sbjct: 156 LDILVKCSEELKTRFLLSQYSLFVKIVDSQGVK-FIKIENGTATPV 200
>gi|189193565|ref|XP_001933121.1| proteasome subunit beta type-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978685|gb|EDU45311.1| proteasome subunit beta type-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 182
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL++H L+ SGE GD VQF E+IQ NV LY RN + L+ AA ANF RGELA ALR +
Sbjct: 16 VLNTHTLMTFSGEAGDTVQFAEYIQANVQLYSMRNNMELSPAATANFVRGELAQALRSRK 75
Query: 61 PYMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL GYD P+LY+IDY+A+ + AA GY Y+ LS++D+H H + E+
Sbjct: 76 PYTVNLLLGGYDTIADKPTLYWIDYLASQASLPYAAHGYAQYYCLSLLDKHHHPDIDYEQ 135
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK 162
+ ++ C E++ RL + ++K++ KDG ++ + + VK
Sbjct: 136 GIKILRMCTEELKRRLPIDFKGVLVKVITKDGIKDVDYEDDVK 178
>gi|340367981|ref|XP_003382531.1| PREDICTED: proteasome subunit beta type-2-A-like [Amphimedon
queenslandica]
Length = 218
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
L H + G+ GD V F EFIQKN++ Y+ +NG L+ +AA N+TR E+A LR++P
Sbjct: 38 LGDHLAMVVCGDTGDTVYFGEFIQKNLAYYRIKNGYSLSPSAAVNYTRHEMAKRLRQAPN 97
Query: 63 MVNILLAGYDKETGP-SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
+VN+++ GYD+ T SLY++DY+ TL V AA GYGSYF+LS +DR+ S MS EEA
Sbjct: 98 LVNLIMTGYDESTKQTSLYFMDYLGTLADVPFAAHGYGSYFALSTLDRYHRSNMSKEEAE 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTP 165
L+ KCILE++ RLV+ P+F VD++G + + +VK P
Sbjct: 158 GLLLKCILEVQKRLVINLPSFSFYFVDENGV---SSKRTVKTEP 198
>gi|391869206|gb|EIT78408.1| 20S proteasome, regulatory subunit beta type PSMB2/PRE1
[Aspergillus oryzae 3.042]
Length = 203
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N+ LY RN L A ANF RGELA +LR +SP
Sbjct: 38 LNKHSLMAFSGEAGDTVQFAEYIQANIQLYTMRNDTELGPNAVANFVRGELARSLRSRSP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LLAG D T P LY+IDY+A+L V AA GY Y+ LS +D H H +S+EE
Sbjct: 98 YTVNLLLAGVDGITQKPHLYWIDYLASLAPVPYAAHGYAQYYCLSTLDNHHHPDISLEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L++ C E++ RL + ++K+V KDG RE
Sbjct: 158 LKLLEMCTDELKRRLPIDYKGVLVKVVTKDGVRE 191
>gi|403356758|gb|EJY77982.1| Proteasome subunit beta type, putative [Oxytricha trifallax]
Length = 195
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 105/154 (68%), Gaps = 1/154 (0%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
+ L+++K++AA+GE DR QF +IQKN+ L FR G L+ A+A + R ELA+ALR++
Sbjct: 36 LSLNTNKVLAAAGEQTDRYQFCNYIQKNLELQAFRTGHELSVEASAQYMRTELASALRRA 95
Query: 61 PYMVNILLAGYDKETGPS-LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN L+ G+D G + L+++DY TL +V K A GY +YF S++D ++H M++E+
Sbjct: 96 PYQVNCLIGGFDHIDGKAKLFWMDYFGTLQQVTKGAHGYAAYFVNSVLDNNYHKDMTLED 155
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ + KCI E+R+R ++ P F+ KIV K+G R
Sbjct: 156 GIATLKKCIQELRTRFIINQPAFIAKIVTKEGIR 189
>gi|195386586|ref|XP_002051985.1| GJ17300 [Drosophila virilis]
gi|194148442|gb|EDW64140.1| GJ17300 [Drosophila virilis]
Length = 206
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 101/147 (68%), Gaps = 1/147 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
LI+ GE GD QFTEFI KN++LY+ RNG L+ +AA+FTR LA +LR ++ Y V +
Sbjct: 43 LISTVGESGDTEQFTEFIAKNIALYKMRNGYDLSPHSAAHFTRKNLAESLRSRTRYQVFM 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
+AGYD GP L +IDY+A+ V+ A GYGS F S+ DR++H ++ EEA D++ K
Sbjct: 103 FIAGYDPAEGPELTFIDYLASAQSVNYAGHGYGSMFCSSIFDRYWHPNITQEEAYDVLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGAR 153
C+LEI+ RL+V NF + +VDK+G R
Sbjct: 163 CVLEIQKRLIVNLKNFNVAVVDKNGVR 189
>gi|301763519|ref|XP_002917175.1| PREDICTED: proteasome subunit beta type-2-like [Ailuropoda
melanoleuca]
Length = 201
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRK-SPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR +PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSWTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAG+D+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 103 LLAGFDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E++ R ++ P F ++I+DK+G +
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDKNGIHD 190
>gi|451848864|gb|EMD62169.1| hypothetical protein COCSADRAFT_201667 [Cochliobolus sativus
ND90Pr]
gi|451998687|gb|EMD91151.1| hypothetical protein COCHEDRAFT_1021842 [Cochliobolus
heterostrophus C5]
Length = 203
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF EFIQ NV LY RN + L+ AA ANF RGELA+ALR + P
Sbjct: 38 LNKHTLMAFSGEAGDTVQFAEFIQANVQLYSMRNNMELSPAATANFVRGELASALRSRKP 97
Query: 62 YMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL GYD P+LY+IDY+A+ + AA GY Y+ LS++D+H H + E+
Sbjct: 98 YTVNLLLGGYDTIADKPTLYWIDYLASQAALPYAAHGYAQYYCLSLLDKHHHPDIDYEQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK 162
+ ++ C E++ RL V ++K + KDG ++ + + VK
Sbjct: 158 LKIMRMCTEELKRRLPVDFKGVMVKAITKDGIKDVEFEDDVK 199
>gi|124000579|gb|ABM87798.1| proteasome (prosome, macropain) subunit, beta type, 2 [synthetic
construct]
Length = 201
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 103/145 (71%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY A L K AA GYG++ +LS++DR++ +S E AV+L K
Sbjct: 103 LLAGYDEHEGPALYYMDYPAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELFRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R ++ P F ++I+DK+G
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDKNG 187
>gi|170029272|ref|XP_001842517.1| proteasome subunit beta type 2 [Culex quinquefasciatus]
gi|167881620|gb|EDS45003.1| proteasome subunit beta type 2 [Culex quinquefasciatus]
Length = 205
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 101/148 (68%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
++A GEPGDRVQFTE+I KN+ LY+ RNG L +AA+FTR LA LR ++PY VN+
Sbjct: 43 MMATIGEPGDRVQFTEYISKNILLYKMRNGYELGPKSAAHFTRKNLADYLRSRTPYQVNV 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+ GYD+ G L+YIDY+A V AA GYG F S++DR+ H ++ EEA +++ K
Sbjct: 103 LVGGYDEADGAQLHYIDYLANSLPVKYAAHGYGGLFVSSILDRYHHEKITQEEAYEIMKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ EI+ RL++ PNF + ++ KDG +E
Sbjct: 163 GVAEIQKRLIINLPNFKVSVIGKDGIKE 190
>gi|396457862|ref|XP_003833544.1| similar to proteasome subunit beta type-2 [Leptosphaeria maculans
JN3]
gi|312210092|emb|CBX90179.1| similar to proteasome subunit beta type-2 [Leptosphaeria maculans
JN3]
Length = 182
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL++H L+A SGE GD VQF E+IQ NV LY RN + L+ AA ANF RGELA ALR +
Sbjct: 16 VLNTHTLMAFSGEAGDTVQFAEYIQANVQLYSMRNDMELSPAATANFVRGELARALRSRK 75
Query: 61 PYMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL GYD + P+LY+IDY+A+ + AA GY Y+ LS++D+H H + E+
Sbjct: 76 PYTVNLLLGGYDTIKDKPTLYWIDYLASQAALPYAAHGYAQYYCLSLLDKHHHPDIDYEQ 135
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK 162
+ ++ C E++ RL + +K++ K+G ++ + + VK
Sbjct: 136 GIKILRMCTEELKRRLPIDFKGVFVKVITKNGIKDVDYEDDVK 178
>gi|195035353|ref|XP_001989142.1| GH11559 [Drosophila grimshawi]
gi|193905142|gb|EDW04009.1| GH11559 [Drosophila grimshawi]
Length = 206
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 101/147 (68%), Gaps = 1/147 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
LI+ GE GD QFTEFI KN++LY+ RNG L+ +AA+FTR LA +LR ++ Y V +
Sbjct: 43 LISTVGESGDTEQFTEFIAKNIALYKMRNGYDLSPRSAAHFTRKNLAESLRSRTRYQVFM 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
+AGYD GP L +IDY+A+ ++ A GYGS F S+ DR++H ++ EEA D++ K
Sbjct: 103 FVAGYDPNEGPELTFIDYLASSKSLNYAGHGYGSMFCASIFDRYWHPNITQEEAYDVLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGAR 153
C+LEI+ RL+V NF + +VDK+G R
Sbjct: 163 CVLEIQKRLIVNLKNFSVAVVDKNGVR 189
>gi|115398077|ref|XP_001214630.1| proteasome component C11 [Aspergillus terreus NIH2624]
gi|114192821|gb|EAU34521.1| proteasome component C11 [Aspergillus terreus NIH2624]
Length = 182
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF EFIQ N+ LY RN L + A ANF RGELA +LR +SP
Sbjct: 17 LNKHNLMAFSGEAGDTVQFAEFIQANIQLYTMRNDTELRSNAVANFVRGELARSLRSRSP 76
Query: 62 YMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D P L++IDY+A+L V AA GY Y+ LS +D+H H +++EE
Sbjct: 77 YTVNLLLGGVDPISEKPHLFWIDYLASLAPVPYAAHGYAQYYCLSTLDKHHHPDITLEEG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L++ C E++ RL + ++K+V KDG RE
Sbjct: 137 MKLLEMCTDELKRRLPIDYKGVLVKVVTKDGVRE 170
>gi|123445636|ref|XP_001311576.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121893391|gb|EAX98646.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 191
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 104/149 (69%), Gaps = 2/149 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LD +A SGE GD +Q +E++Q NV+LY+FRNG+ L++ A A+F R +A A+RKSPY
Sbjct: 38 LDDRHALAMSGETGDCLQLSEYLQGNVALYKFRNGVELSSDALAHFIRHTMAKAVRKSPY 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN+LL+GYD + P LY++DY+ TL + A GY YF +S+ D+H+ G+++E+ +
Sbjct: 98 EVNMLLSGYDGK--PHLYFMDYLGTLQSIPYGAQGYCQYFVMSVFDKHYKEGLTLEDGKE 155
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
L+ + +I+ R VAP F++K+VDK+G
Sbjct: 156 LMKLALNQIKQRFTVAPHGFIVKLVDKNG 184
>gi|195579636|ref|XP_002079667.1| GD21900 [Drosophila simulans]
gi|194191676|gb|EDX05252.1| GD21900 [Drosophila simulans]
Length = 201
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 100/148 (67%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
LI+ GE GD QFTEF+ KN++LY+ RNG L+ A+A+FTR LA LR ++PY V +
Sbjct: 43 LISTVGESGDTEQFTEFVSKNIALYKMRNGYDLSPQASAHFTRKNLAEYLRSRTPYQVFM 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
+AGYD GP L +IDY+A V+ A GYG+ F+ S+ DR++H ++ +EA D+ K
Sbjct: 103 FVAGYDPNAGPELTFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQDEAYDVFKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI EI+ RLVV NF + +VDKDG R+
Sbjct: 163 CIAEIQKRLVVNLKNFTVAVVDKDGVRD 190
>gi|119501034|ref|XP_001267274.1| proteasome component Pre1, putative [Neosartorya fischeri NRRL 181]
gi|119415439|gb|EAW25377.1| proteasome component Pre1, putative [Neosartorya fischeri NRRL 181]
Length = 212
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L+A SGE GD VQF E+IQ NV+LY RN L A ANF RGELA +LR ++P
Sbjct: 47 LSQHTLMAFSGEAGDTVQFAEYIQANVALYTMRNDTELRPNAVANFVRGELARSLRSRNP 106
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T P LY+IDY++ L +V AA GY Y+ LS++D+H HS +S+E+
Sbjct: 107 YTVNLLLGGVDSITEEPHLYWIDYLSALARVPYAAHGYAQYYCLSILDKHHHSDISLEQG 166
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ C E++ RL + ++K+V KDG +E
Sbjct: 167 MKLLQMCTDELKRRLPIDYKGLLVKVVTKDGVKE 200
>gi|440635645|gb|ELR05564.1| proteasome subunit beta type-2 [Geomyces destructans 20631-21]
Length = 203
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD +QF E+IQ N LY RN I L+ +A ANF RG+LA++LR ++P
Sbjct: 38 LNQHTLMAFSGEAGDTIQFAEYIQANAQLYSMRNQIDLSPSAVANFVRGQLASSLRSRNP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D TG PSLY++DY+A+L ++ AA GY Y+ LS++D+H H + E+
Sbjct: 98 YNVNLLLGGVDPITGKPSLYWLDYLASLAQLPYAAHGYAQYYCLSILDKHHHPDIDFEQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 169
+ ++ C E++ RL V ++K++ KDG RE + + D V SA
Sbjct: 158 MKILRLCTDELKRRLPVDFKGMLVKVITKDGIREVEYDD---DAVVKSA 203
>gi|195344560|ref|XP_002038849.1| GM17161 [Drosophila sechellia]
gi|194133979|gb|EDW55495.1| GM17161 [Drosophila sechellia]
Length = 201
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 100/148 (67%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
LI+ GE GD QFTEF+ KN++LY+ RNG L+ A+A+FTR LA LR ++PY V +
Sbjct: 43 LISTVGESGDTEQFTEFVSKNIALYKMRNGYDLSPHASAHFTRKNLAEYLRSRTPYQVFM 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
+AGYD GP L +IDY+A V+ A GYG+ F+ S+ DR++H ++ +EA D+ K
Sbjct: 103 FVAGYDPNAGPELTFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQDEAYDVFKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI EI+ RLVV NF + +VDKDG R+
Sbjct: 163 CIAEIQKRLVVNLKNFTVAVVDKDGVRD 190
>gi|71020191|ref|XP_760326.1| hypothetical protein UM04179.1 [Ustilago maydis 521]
gi|46100035|gb|EAK85268.1| hypothetical protein UM04179.1 [Ustilago maydis 521]
Length = 194
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL H ++A SGEPGD +QF+E+I++N LY RN + L +AA + R +LA +LR ++
Sbjct: 37 VLSDHLVMAYSGEPGDTLQFSEWIERNSRLYSIRNHVELRPKSAAAWIRKQLAESLRSRN 96
Query: 61 PYMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN LL G+D + P+LY+IDY+ TL V AA GYG++F++S +DR+ MS+EE
Sbjct: 97 PYQVNYLLGGFDLPNSEPALYWIDYLGTLATVPFAAHGYGAFFAMSTLDRYHRPDMSLEE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+DL+ +CI E++ R +V F +++VD++GAR
Sbjct: 157 GLDLLRRCINELKQRFIVDLGTFTVRVVDREGAR 190
>gi|84999618|ref|XP_954530.1| proteasome subunit beta type 2 [Theileria annulata]
gi|65305528|emb|CAI73853.1| proteasome subunit beta type 2, putative [Theileria annulata]
Length = 212
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 110/165 (66%), Gaps = 3/165 (1%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M +D KL+ +G GDR+QF E+I+K+V ++++ +TT + A+F R +LA LRKS
Sbjct: 37 MQIDDSKLLLLAGPSGDRMQFGEYIRKSVHYHRYKTSFSMTTKSMAHFVRQQLAEYLRKS 96
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY V++L+AG+D GP LY+IDY+A+ +VD+A GYG +F ++D+ +H ++VEEA
Sbjct: 97 PYQVDLLVAGFDN-NGPKLYWIDYLASSTEVDRAVHGYGGHFLRGLLDKEYHENLTVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTP 165
V ++ KC E+++R ++ NF KI+DK+G + + DTP
Sbjct: 156 VSMLKKCRHEVKNRFLLGQSNFRAKIIDKNGVHDVDIEDD--DTP 198
>gi|209880066|ref|XP_002141473.1| proteasome subunit beta type 2 [Cryptosporidium muris RN66]
gi|209557079|gb|EEA07124.1| proteasome subunit beta type 2, putative [Cryptosporidium muris
RN66]
Length = 201
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 106/153 (69%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
+ +D +KLIA +G+ GDR QF EFI+ N++LY RN + L T+A A+FTR ELA LR +
Sbjct: 36 LSIDGNKLIATAGDIGDRNQFGEFIKCNINLYSLRNNVNLGTSATASFTRLELAELLRSN 95
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
P+ V +L+ GY+ GP LY+ID IA++ V+KAA GYG ++DR + S ++ +EA
Sbjct: 96 PHNVRMLIGGYNDREGPLLYWIDEIASMASVNKAAHGYGGLLVTGILDRFYKSNLTQDEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
++++ KC E++SR +++ + +KIVDK+G +
Sbjct: 156 LNILIKCTAELKSRFLISQYDLFVKIVDKNGMK 188
>gi|328860067|gb|EGG09174.1| hypothetical protein MELLADRAFT_52069 [Melampsora larici-populina
98AG31]
Length = 194
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 104/155 (67%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
V+ H ++A SGEPGD VQF E++++N+ LY RN + L AA++TR +LAT+LR +
Sbjct: 37 VVSKHVVMAYSGEPGDTVQFAEYVERNLRLYGIRNHVELLPHEAASWTRNQLATSLRSRK 96
Query: 61 PYMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL GYD + P LY+IDY+ T+ +V AA GYG+YF LS MDR M++EE
Sbjct: 97 PYSVNMLLGGYDTARSVPMLYWIDYLGTMAEVPYAAHGYGAYFCLSTMDRFHSPDMNLEE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ +CI E+ +R + F I++ DK+G RE
Sbjct: 157 GLALLKRCIDELNTRFIANLGTFKIRVADKEGVRE 191
>gi|294928984|ref|XP_002779246.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
gi|239888275|gb|EER11041.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
Length = 175
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 94/136 (69%), Gaps = 1/136 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D++KL+AA+G D QF EFI +NV LY NGI LTT A ANFTR ELA ALRK PY
Sbjct: 39 MDNNKLVAAAGPQADSNQFLEFISRNVELYALVNGIQLTTHALANFTRNELADALRKGPY 98
Query: 63 MVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
VN+L+ GYD + G SLYY+DY+A+ K+ + A GY +YF L ++D+ + M+ EE +
Sbjct: 99 QVNMLIGGYDDKDGSASLYYMDYLASCQKITRGAHGYAAYFVLGLLDKLYKKDMTQEEGL 158
Query: 122 DLVDKCILEIRSRLVV 137
D +++CI E + R ++
Sbjct: 159 DAINQCIKECKKRFII 174
>gi|315045448|ref|XP_003172099.1| proteasome component C11 [Arthroderma gypseum CBS 118893]
gi|311342485|gb|EFR01688.1| proteasome component C11 [Arthroderma gypseum CBS 118893]
Length = 184
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 2/160 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF EFIQ N LY RN L +A A+F RGELA +LR +SP
Sbjct: 17 LNKHTLMAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRSP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H +S E+
Sbjct: 77 YTVNLLLGGVDPITEKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISYEQG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRES 160
+ L++ C E++ RL + ++K+V KDG R+ + E+
Sbjct: 137 LKLLEMCSDELKRRLPIDFKGVLVKVVTKDGIRDVNFDEA 176
>gi|388855719|emb|CCF50707.1| probable multicatalytic endopeptidase complex chain PRE1 [Ustilago
hordei]
Length = 194
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL H ++ SGEPGD +QF+E+I++N LY RN + L +AA++ R ELA +LR ++
Sbjct: 37 VLSDHLVMTFSGEPGDTLQFSEWIERNSRLYSIRNHVELRPKSAASWIRKELAESLRSRN 96
Query: 61 PYMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
Y VN+LL G+D + P+LY+IDY+ TL V AA GYG++F++S +DR+ MS+EE
Sbjct: 97 AYQVNLLLGGFDLPSSEPALYWIDYLGTLATVPFAAHGYGAFFAMSTLDRYHRPDMSLEE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+DL+ +CI E++ R +V F I++VD++GAR
Sbjct: 157 GLDLLRRCINELKQRFIVDLGTFTIRVVDREGAR 190
>gi|326472706|gb|EGD96715.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
Length = 184
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 105/160 (65%), Gaps = 2/160 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF EFIQ N LY RN L +A A+F RGELA +LR +SP
Sbjct: 17 LNKHTLMAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRSP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H +S E+
Sbjct: 77 YTVNLLLGGVDPITEKPSLYWLDYLASLARVPYAAHGYAQYYCLSILDKHHHPDISFEQG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRES 160
+ L++ C E++ RL + ++K+V KDG R+ + ++
Sbjct: 137 LKLLEMCSDELKRRLPIDFKGVLVKVVTKDGIRDVDFEQA 176
>gi|198474058|ref|XP_001356543.2| GA14463 [Drosophila pseudoobscura pseudoobscura]
gi|198138230|gb|EAL33607.2| GA14463 [Drosophila pseudoobscura pseudoobscura]
Length = 206
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 100/148 (67%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
LI+ +GE GD QFTEFI KN++LY+ RNG L+ AAA+FTR LA LR ++PY V +
Sbjct: 43 LISTTGESGDTEQFTEFISKNIALYKMRNGYDLSPRAAAHFTRKNLADYLRSRTPYQVFM 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
+AGYD+ G L +IDY+A ++ A GYG+ F S+ DR++H ++ +EA D+ K
Sbjct: 103 FVAGYDETDGAELAFIDYLANAKSLNHAGHGYGAMFCSSIYDRYWHPNITQDEAYDIFKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI+EI+ RLVV NF + +VDK+G R
Sbjct: 163 CIVEIQKRLVVNLKNFNVSVVDKNGVRN 190
>gi|425781825|gb|EKV19769.1| Proteasome subunit beta type [Penicillium digitatum PHI26]
gi|425782955|gb|EKV20833.1| Proteasome subunit beta type [Penicillium digitatum Pd1]
Length = 182
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 102/154 (66%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N +LY RN L+ +A ANF RGELA++LR +SP
Sbjct: 17 LNKHTLMAFSGESGDTVQFAEYIQANATLYSMRNDTELSPSAVANFVRGELASSLRSRSP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T P LY+IDY+A+L + AA GY Y+ L+++D+H H S+EE
Sbjct: 77 YTVNLLLGGIDPVTEKPHLYWIDYLASLAPLPYAAHGYAQYYCLAILDKHHHPDCSLEEG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ C E++ RL + ++K+V KDG +E
Sbjct: 137 LALLTLCTDELKRRLPIDYKGMLVKVVTKDGVQE 170
>gi|327304357|ref|XP_003236870.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326459868|gb|EGD85321.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 184
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 105/160 (65%), Gaps = 2/160 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF EFIQ N LY RN L +A A+F RGELA +LR +SP
Sbjct: 17 LNKHTLMAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRSP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H +S E+
Sbjct: 77 YTVNLLLGGVDPITEKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISFEQG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRES 160
+ L++ C E++ RL + ++K+V KDG R+ + ++
Sbjct: 137 LKLLEMCSDELKRRLPIDFKGVLVKVVTKDGIRDVDFEQA 176
>gi|225713306|gb|ACO12499.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]
gi|290562017|gb|ADD38406.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]
Length = 206
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 106/153 (69%), Gaps = 2/153 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L +H L++A GE GD QF EF+ KN+ LY+ RN ++ + AANFTR LA LR ++P
Sbjct: 38 LTNHLLMSALGESGDTTQFAEFMAKNIQLYKMRNAYEMSPSEAANFTRRNLADYLRSRTP 97
Query: 62 YMVNILLAGYDKETGPS-LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ VN+L+AGYDK++ + LY +DY+A + K + A+ GYG FS ++DR++ M+VEE
Sbjct: 98 FHVNLLIAGYDKKSDKAELYTMDYLAGMVKTEHASHGYGGIFSSGILDRNYRPDMTVEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
DL+ C+ E++ RL++ PNF ++I++K+G +
Sbjct: 158 YDLIKTCVAEVQKRLIINLPNFSVQIINKEGTK 190
>gi|225713254|gb|ACO12473.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]
gi|290561176|gb|ADD37990.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]
Length = 210
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 106/153 (69%), Gaps = 2/153 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L +H L++A GE GD QF EF+ KN+ LY+ RN ++ + AANFTR LA LR ++P
Sbjct: 38 LTNHLLMSALGESGDTTQFAEFMAKNIQLYKMRNAYEMSPSEAANFTRRNLADYLRSRTP 97
Query: 62 YMVNILLAGYDKETGPS-LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ VN+L+AGYDK++ + LY +DY+A + + + A+ GYG FS ++DR++ M+VEE
Sbjct: 98 FHVNLLIAGYDKKSNKTELYTVDYLAGMVQTEHASHGYGGIFSSGILDRNYRPDMTVEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
DL+ C+ E++ RL++ PNF ++I++K+G +
Sbjct: 158 YDLITTCVAEVQKRLIINLPNFSVQIINKEGTK 190
>gi|320163063|gb|EFW39962.1| proteasome beta 2 subunit [Capsaspora owczarzaki ATCC 30864]
Length = 199
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS-P 61
+ H L +G GD VQF+EFIQKN+ LYQ RNG L+ AAA++TR +LA ALR S
Sbjct: 38 MSPHLLQVCNGPSGDVVQFSEFIQKNIKLYQMRNGFALSPHAAAHYTRDQLARALRSSGA 97
Query: 62 YMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LLAGYD LY++DY+A L KV A GY S+F LS++DR++ ++++EA
Sbjct: 98 YQVNLLLAGYDTINKQAELYFMDYLAALVKVPFGAHGYASHFVLSLLDRYYTPEVTLDEA 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ CI E++ RLV+ P F +++VD G R+
Sbjct: 158 LRLMKMCIAEVQKRLVINLPKFTVRVVDAQGTRD 191
>gi|194884398|ref|XP_001976249.1| GG20111 [Drosophila erecta]
gi|195484013|ref|XP_002090526.1| GE13168 [Drosophila yakuba]
gi|190659436|gb|EDV56649.1| GG20111 [Drosophila erecta]
gi|194176627|gb|EDW90238.1| GE13168 [Drosophila yakuba]
Length = 201
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
LI+ GE GD QFTEF+ KN++LY+ RNG L+ A+A+FTR LA LR ++PY V +
Sbjct: 43 LISTVGESGDTEQFTEFVSKNIALYKMRNGYDLSPHASAHFTRKNLAEYLRSRTPYQVFM 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
+AGYD GP L +IDY+A V+ A GYG+ F+ S+ DR++H ++ EA D+ K
Sbjct: 103 FVAGYDPNEGPELTFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI EI+ RLVV NF + +VDKDG R+
Sbjct: 163 CIAEIQKRLVVNLKNFTVAVVDKDGVRD 190
>gi|361127842|gb|EHK99799.1| putative proteasome subunit beta type-2 [Glarea lozoyensis 74030]
Length = 203
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD +QF E+IQ N LY RNGI L+ +A ANF RGELA++LR + P
Sbjct: 38 LNKHTLMAFSGEAGDTIQFAEYIQANAQLYSMRNGIDLSPSAVANFVRGELASSLRSRKP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L + AA GY Y+ LS++D+H H + E+
Sbjct: 98 YNVNLLLGGVDPITLKPSLYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDIDYEQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK 162
+ ++ C E++ RL + ++K++ KDG +E + + +
Sbjct: 158 LKILRMCTDELKRRLPIDFKGMLVKVITKDGIKEVEYNDDAR 199
>gi|320590812|gb|EFX03255.1| proteasome component [Grosmannia clavigera kw1407]
Length = 208
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 102/153 (66%), Gaps = 2/153 (1%)
Query: 4 DSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPY 62
+ H L+A SGEPGD VQF E+IQ N+ LY RN L+ +A A+F RGELA++LR + PY
Sbjct: 39 NKHTLLAFSGEPGDTVQFAEYIQANIQLYTMRNAAELSPSAVAHFVRGELASSLRSRKPY 98
Query: 63 MVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
VN+LL G D T PSLY+IDY+A+L V AA GY Y+ LS++D+H H +++++ +
Sbjct: 99 TVNLLLGGVDPITHKPSLYWIDYLASLAPVPYAAHGYAQYYCLSILDKHHHPDITLDQGI 158
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L+ C E++ R+ + ++K+V KDG E
Sbjct: 159 KLLSMCTDELKRRMPIDFKGMIVKVVTKDGVIE 191
>gi|255950050|ref|XP_002565792.1| Pc22g18890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592809|emb|CAP99177.1| Pc22g18890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 203
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H ++A SGE GD VQF E+IQ N +LY RN L+ +A ANF RGELA +LR +SP
Sbjct: 38 LNKHTVMAFSGESGDTVQFAEYIQANAALYSMRNDTELSPSAVANFVRGELARSLRSRSP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T P LY++DY+A+L + AA GY Y+ LS++D+H H S+EE
Sbjct: 98 YTVNLLLGGIDPVTEKPHLYWVDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDCSLEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ C E++ RL + ++K+V KDG RE
Sbjct: 158 LALLTLCTDELKRRLPIDYKGMLVKVVTKDGVRE 191
>gi|195114510|ref|XP_002001810.1| GI17050 [Drosophila mojavensis]
gi|193912385|gb|EDW11252.1| GI17050 [Drosophila mojavensis]
Length = 206
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
LI+ G GD QFTEFI KN+ LY+ RNG L+ +AA+FTR LA +LR ++PY V +
Sbjct: 43 LISTVGASGDTEQFTEFIAKNIVLYKMRNGYDLSPKSAAHFTRKNLAESLRSRTPYQVFM 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
+AGYD GP L +ID +A+ ++ A GYGS F S+ DR++H ++ EEA D++ K
Sbjct: 103 FIAGYDTTEGPELTFIDNLASAQSLNYAGHGYGSMFCASIFDRYWHPKITQEEAYDVLKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+LEI+ RL+V NF + +VDK G R+
Sbjct: 163 CVLEIQKRLIVNLKNFNVSVVDKSGVRQ 190
>gi|296805171|ref|XP_002843410.1| proteasome component Pre1 [Arthroderma otae CBS 113480]
gi|238844712|gb|EEQ34374.1| proteasome component Pre1 [Arthroderma otae CBS 113480]
Length = 194
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 105/160 (65%), Gaps = 2/160 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF EFIQ N LY RN L +A A+F RGELA +LR +SP
Sbjct: 27 LNKHTLMAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRSP 86
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H +S E+
Sbjct: 87 YTVNLLLGGVDPITEKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISYEQG 146
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRES 160
+ L++ C E++ RL + ++K+V KDG ++ + E+
Sbjct: 147 LKLLEMCSDELKRRLPIDFKGVLVKVVTKDGIKDVDFEEA 186
>gi|326437164|gb|EGD82734.1| hypothetical protein PTSG_03383 [Salpingoeca sp. ATCC 50818]
Length = 196
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 100/153 (65%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L SH L+ +G GD F ++IQ N+ L NG +T A AN+ R +A ALR +
Sbjct: 38 LSSHALMLLAGPVGDCSNFGDYIQANLKLQALTNGFEASTHATANYVRKNIADALRSRGA 97
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y VN L+AG D++ GPSLYY+DY+ T+ KV A GYGS+F+ + +D H+ GMS+EEA
Sbjct: 98 YQVNSLIAGVDEQDGPSLYYLDYLGTMVKVPYGAHGYGSFFTFATLDHHYREGMSLEEAT 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
D++ KC LEI++R ++ +F +++VD DG RE
Sbjct: 158 DVLKKCFLEIKTRFLMNLDSFKVRVVDADGIRE 190
>gi|146422381|ref|XP_001487130.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
gi|152060493|sp|A5DB52.1|PSB4_PICGU RecName: Full=Probable proteasome subunit beta type-4
gi|146388251|gb|EDK36409.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 194
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 103/154 (66%), Gaps = 3/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KS 60
L+SH L+A SGE GD VQF E+IQ N LY R N L+ A A+F R +LAT++R +
Sbjct: 38 LNSHNLMAYSGEAGDTVQFAEYIQANTQLYTMRENDTELSPKATASFVRNQLATSIRSRK 97
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LLAGYD TG PSL +IDY+ T ++ AA GY ++ S++D+H+ GM+ E+
Sbjct: 98 PYQVNVLLAGYDTNTGKPSLNWIDYLGTQVELPYAAHGYAGFYCTSLLDKHYKKGMNFED 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+DL+ KCI E+ +R+ + IK+VDK+G +
Sbjct: 158 GLDLLKKCIKELETRMPIDFKGCYIKVVDKEGIK 191
>gi|159125011|gb|EDP50128.1| proteasome component Pre1, putative [Aspergillus fumigatus A1163]
Length = 212
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L+A SGE GD VQF E+IQ NV+LY RN L A ANF RGELA +LR ++P
Sbjct: 47 LSQHTLMAFSGEAGDTVQFAEYIQANVALYTMRNDTELRPNAVANFVRGELARSLRSRNP 106
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T P LY+IDY++ L +V AA GY Y+ LS++D+H H +S+E+
Sbjct: 107 YTVNLLLGGVDSITQEPHLYWIDYLSALARVPYAAHGYAQYYCLSILDKHHHPDISLEQG 166
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ C E++ RL + ++K+V KDG +E
Sbjct: 167 MKLLQMCTDELKRRLPIDYKGVLVKVVTKDGVKE 200
>gi|70994594|ref|XP_752074.1| proteasome component Pre1 [Aspergillus fumigatus Af293]
gi|66849708|gb|EAL90036.1| proteasome component Pre1, putative [Aspergillus fumigatus Af293]
Length = 212
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L+A SGE GD VQF E+IQ NV+LY RN L A ANF RGELA +LR ++P
Sbjct: 47 LSQHTLMAFSGEAGDTVQFAEYIQANVALYTMRNDTELRPNAVANFVRGELARSLRSRNP 106
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T P LY+IDY++ L +V AA GY Y+ LS++D+H H +S+E+
Sbjct: 107 YTVNLLLGGVDSITQEPHLYWIDYLSALARVPYAAHGYAQYYCLSILDKHHHPDISLEQG 166
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ C E++ RL + ++K+V KDG +E
Sbjct: 167 MKLLQMCTDELKRRLPIDYKGVLVKVVTKDGVKE 200
>gi|20129563|ref|NP_609804.1| CG17331, isoform A [Drosophila melanogaster]
gi|442628090|ref|NP_001260511.1| CG17331, isoform B [Drosophila melanogaster]
gi|7298330|gb|AAF53558.1| CG17331, isoform A [Drosophila melanogaster]
gi|21064815|gb|AAM29637.1| RH72196p [Drosophila melanogaster]
gi|220949490|gb|ACL87288.1| CG17331-PA [synthetic construct]
gi|220958608|gb|ACL91847.1| CG17331-PA [synthetic construct]
gi|440213861|gb|AGB93046.1| CG17331, isoform B [Drosophila melanogaster]
Length = 201
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 98/148 (66%), Gaps = 1/148 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
LI+ GE GD QFTEFI KN++LY+ RNG L+ +A+FTR LA LR ++PY V +
Sbjct: 43 LISTVGESGDTEQFTEFISKNIALYKMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFM 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
+AGYD GP L +IDY+A V+ A GYG+ F+ S+ DR++H ++ EA D+ K
Sbjct: 103 FVAGYDPNAGPELTFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI EI+ RLVV NF + +VDKDG R+
Sbjct: 163 CIAEIQKRLVVNLKNFTVAVVDKDGVRD 190
>gi|37720049|gb|AAN08876.1| putative proteasome subunit beta type 2 [Meyerozyma guilliermondii]
Length = 192
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 103/154 (66%), Gaps = 3/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KS 60
L+SH L+A SGE GD VQF E+IQ N LY R N L+ A A+F R +LAT++R +
Sbjct: 38 LNSHNLMAYSGEAGDTVQFAEYIQANTQLYTMRENDTELSPKATASFVRNQLATSIRSRK 97
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LLAGYD TG PSL +IDY+ T ++ AA GY ++ S++D+H+ GM+ E+
Sbjct: 98 PYQVNVLLAGYDTNTGKPSLNWIDYLGTQVELPYAAHGYAGFYCTSLLDKHYKKGMNFED 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+DL+ KCI E+ +R+ + IK+VDK+G +
Sbjct: 158 GLDLLKKCIKELETRMPIDFKGCYIKVVDKEGIK 191
>gi|406863085|gb|EKD16133.1| proteasome component Pre1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 217
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 102/162 (62%), Gaps = 2/162 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD +QF E+IQ N LY RN LT A A+F RGELA++LR + P
Sbjct: 52 LNKHTLMAFSGEAGDTIQFAEYIQANAQLYSMRNSTSLTPTALAHFVRGELASSLRSRKP 111
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L + AA GY Y+ LS++D+H H + EE
Sbjct: 112 YNVNLLLGGVDPLTNRPSLYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDIGYEEG 171
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK 162
+ L+ C E++ RL + ++K+V KDG RE + + +
Sbjct: 172 IKLLRLCTDELKRRLPIDFKGMMVKVVTKDGVREVDYDDEAR 213
>gi|326482048|gb|EGE06058.1| proteasome component C11 [Trichophyton equinum CBS 127.97]
Length = 184
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 104/160 (65%), Gaps = 2/160 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF EFIQ N LY RN L +A A+F RGELA +LR + P
Sbjct: 17 LNKHTLMAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRRP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H +S E+
Sbjct: 77 YTVNLLLGGVDPITEKPSLYWLDYLASLARVPYAAHGYAQYYCLSILDKHHHPDISFEQG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRES 160
+ L++ C E++ RL + ++K+V KDG R+ + ++
Sbjct: 137 LKLLEMCSDELKRRLPIDFKGVLVKVVTKDGIRDVDFEQA 176
>gi|145256902|ref|XP_001401555.1| proteasome subunit beta type-2 [Aspergillus niger CBS 513.88]
gi|134058465|emb|CAL00674.1| unnamed protein product [Aspergillus niger]
Length = 203
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N+ LY RN L +A A+F RGE+A +LR ++P
Sbjct: 38 LNEHNLMAFSGEAGDTVQFAEYIQANIQLYTMRNDTELGPSAVASFVRGEMARSLRSRNP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T P LY+IDY+A+L V AA GY Y+ LS +D+H H +S+EE
Sbjct: 98 YTVNLLLGGVDPITQKPHLYWIDYLASLAPVPYAAHGYAQYYCLSTLDKHHHPDISLEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L++ C E++ RL + ++KIV KDG +E
Sbjct: 158 MKLLEMCTDELKRRLPIDYKGVLVKIVTKDGVQE 191
>gi|164426284|ref|XP_960720.2| proteasome component C11 [Neurospora crassa OR74A]
gi|157071273|gb|EAA31484.2| proteasome component C11 [Neurospora crassa OR74A]
Length = 240
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+ Q N LY RNG L+ +A ANF RGELAT+LR + P
Sbjct: 75 LNKHTLMAFSGEAGDTVQFAEYTQANAQLYSMRNGTDLSPSALANFVRGELATSLRSRKP 134
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L KV AA GY Y+ LS++D+H H +++ +
Sbjct: 135 YNVNLLLGGVDPITHKPSLYWLDYLASLAKVPYAAHGYAQYYCLSILDKHHHPDITLHQG 194
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ L++ C E++ RL + +K V KDG
Sbjct: 195 IKLLNLCTDELKRRLPIDFKGMTVKAVTKDG 225
>gi|225717446|gb|ACO14569.1| Proteasome subunit beta type-2 [Caligus clemensi]
Length = 204
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 104/153 (67%), Gaps = 2/153 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L +H L++A G+ GD +F EF+ KN+ LY+ RN ++ + AANF R LA +LR ++P
Sbjct: 38 LSNHLLMSAIGQSGDTTEFAEFMTKNIQLYKLRNAYEMSPSEAANFIRRNLADSLRSRNP 97
Query: 62 YMVNILLAGYDKETGPS-LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ VN+L+AGYDK++ + LY +DY+A + K + A+ GYG FS ++DRH+ M+VEE
Sbjct: 98 FHVNLLIAGYDKKSSKAELYSMDYLAGMVKTEHASHGYGGIFSSGILDRHYRPDMTVEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+L+ CI E++ RL++ PNF I+I KDG +
Sbjct: 158 YNLIKTCIAEVQKRLIINLPNFGIQIASKDGIK 190
>gi|17380220|sp|Q9P6U7.1|PSB4_NEUCR RecName: Full=Probable proteasome subunit beta type-4
gi|7635833|emb|CAB88637.1| probable multicatalytic endopeptidase complex chain PRE1
[Neurospora crassa]
Length = 203
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+ Q N LY RNG L+ +A ANF RGELAT+LR + P
Sbjct: 38 LNKHTLMAFSGEAGDTVQFAEYTQANAQLYSMRNGTDLSPSALANFVRGELATSLRSRKP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L KV AA GY Y+ LS++D+H H +++ +
Sbjct: 98 YNVNLLLGGVDPITHKPSLYWLDYLASLAKVPYAAHGYAQYYCLSILDKHHHPDITLHQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ L++ C E++ RL + +K V KDG
Sbjct: 158 IKLLNLCTDELKRRLPIDFKGMTVKAVTKDG 188
>gi|259482727|tpe|CBF77481.1| TPA: 20S proteasome beta-type subunit (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 203
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 99/153 (64%), Gaps = 2/153 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E++Q NV LY RN L+ A ANF RGELA +LR ++P
Sbjct: 38 LNEHTLVAFSGEAGDTVQFAEYVQANVQLYTMRNDTELSPNAVANFVRGELARSLRSRNP 97
Query: 62 YMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D P LY+IDY+A+L V AA GY Y+ LS +D+H H +++E+
Sbjct: 98 YTVNLLLGGVDPISQKPHLYWIDYLASLASVPYAAHGYAQYYCLSTLDKHHHPDITLEQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ L++ C E++ RL + ++K+V KDG R
Sbjct: 158 MKLLEMCTDELKRRLPIDYKGVLVKVVTKDGVR 190
>gi|336472552|gb|EGO60712.1| hypothetical protein NEUTE1DRAFT_115844 [Neurospora tetrasperma
FGSC 2508]
gi|350294216|gb|EGZ75301.1| putative proteasome subunit beta type-2 [Neurospora tetrasperma
FGSC 2509]
Length = 203
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+ Q N LY RNG L+ +A ANF RGELAT+LR + P
Sbjct: 38 LNKHTLMAFSGEAGDTVQFAEYTQANAQLYSMRNGTDLSPSALANFVRGELATSLRSRKP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L KV AA GY Y+ LS++D+H H +++ +
Sbjct: 98 YNVNLLLGGVDPITHKPSLYWLDYLASLAKVPYAAHGYAQYYCLSILDKHHHPDITLHQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ L++ C E++ RL + +K V KDG
Sbjct: 158 IKLLNLCTDELKRRLPIDFKGMTVKAVTKDG 188
>gi|358392271|gb|EHK41675.1| hypothetical protein TRIATDRAFT_302124 [Trichoderma atroviride IMI
206040]
Length = 203
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL+ H L+A SGE GD VQF E+IQ+N LY RN L+ +A A+F RGELAT+LR ++
Sbjct: 37 VLNQHTLLAFSGEAGDTVQFAEYIQRNAQLYSMRNETELSPSALAHFVRGELATSLRSRN 96
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+L+ G D TG PSLY++DY+A L +V AA GY Y+ LS++D+H H +++ +
Sbjct: 97 PYNVNLLMGGVDPITGKPSLYWLDYLAALAEVPYAAHGYAQYYCLSLLDKHHHPDITLGQ 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ L+ CI E++ RL + V+K + DG
Sbjct: 157 GIKLMTMCIDELKRRLPIDFKGMVVKAIKADG 188
>gi|312373129|gb|EFR20941.1| hypothetical protein AND_18263 [Anopheles darlingi]
Length = 205
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 98/147 (66%), Gaps = 1/147 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+A GEPGDRVQFTE+I KN+ LY+ RNG L AAA+FTR LA LR ++PY VNI
Sbjct: 43 LMATMGEPGDRVQFTEYISKNILLYKMRNGYELGPKAAAHFTRRNLADYLRSRTPYNVNI 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LL G D+ GP L+YIDY+A V AA GYG F S+ DR+ H ++ +EA ++ K
Sbjct: 103 LLGGCDEVDGPQLHYIDYLANSLPVKYAAHGYGGMFVASIFDRYHHDRITKKEAYEIFRK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ EI RL++ PNF + ++DK+G +
Sbjct: 163 GVAEIHRRLILNLPNFKVAVIDKEGIK 189
>gi|403163180|ref|XP_003890266.1| 20S proteasome subunit beta 4 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375163947|gb|EHS62553.1| 20S proteasome subunit beta 4 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 194
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 105/155 (67%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
V+ H ++A SGEPGD VQF E++++N+ LY RN + L AA++TR +LA++LR ++
Sbjct: 37 VVSKHVVMAYSGEPGDTVQFAEYVERNLRLYGIRNHVDLLPHEAASWTRNQLASSLRSRN 96
Query: 61 PYMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
Y VN+LL G+D E P LY+IDY+ T+ +V AA GYG+YF LS MDR M +++
Sbjct: 97 AYSVNLLLGGFDTAEAVPLLYWIDYLGTMAQVPYAAHGYGAYFCLSTMDRFHRPDMDLQQ 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++L+ +CI E+ +R +V F +++ DKDG RE
Sbjct: 157 GLELLKRCIDELSTRFIVNLGTFKVRVADKDGVRE 191
>gi|407921804|gb|EKG14942.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 205
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N+ LY RN L +A A+F RGELA ALR + P
Sbjct: 40 LNKHTLLAFSGEAGDTVQFAEYIQANIQLYSMRNDTDLGPSAVASFVRGELARALRSRRP 99
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY+IDY+A L V AA GY Y+ LS++D+H H +S+E+
Sbjct: 100 YTVNLLLGGMDPITDKPSLYWIDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDISLEQG 159
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 169
+ ++ C E++ RL + V+K++ K+G +E + + D PV A
Sbjct: 160 MKILRMCSDELKRRLPIDFKGLVVKVITKEGIQEQDFND---DAPVKPA 205
>gi|358366047|dbj|GAA82668.1| proteasome component C11 [Aspergillus kawachii IFO 4308]
Length = 182
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N+ LY RN L A A+F RGE+A +LR ++P
Sbjct: 17 LNEHNLMAFSGEAGDTVQFAEYIQANIQLYTMRNDTELGPNAVASFVRGEMARSLRSRNP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T P LY+IDY+A+L V AA GY Y+ LS +D+H H +S+EE
Sbjct: 77 YTVNLLLGGVDPITHKPHLYWIDYLASLAPVPYAAHGYAQYYCLSTLDKHHHPDISLEEG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L++ C E++ RL + ++KIV KDG +E
Sbjct: 137 MKLLEMCTDELKRRLPIDYKGVLVKIVTKDGVQE 170
>gi|429328635|gb|AFZ80395.1| proteasome subunit beta type 2, putative [Babesia equi]
Length = 213
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M +D+ KL+ +G GDR QF E+I+K+V + ++NG P++T + A+F R ELA LRKS
Sbjct: 37 MPIDNSKLLLLAGPMGDRAQFGEYIRKSVHYHYYKNGFPMSTPSLAHFVRHELAEYLRKS 96
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y V++L+AG+DK+ GP L+++DY+A+ +DKA GYG ++D+ +H +SV EA
Sbjct: 97 SYHVDLLIAGFDKD-GPHLFWVDYLASSTAIDKAVHGYGGNLLRGLLDKEYHENISVAEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTP 165
V L+ KC E+++R +++ NF KI+DKDG + E + P
Sbjct: 156 VALLKKCRHELKNRFLLSQSNFRAKIIDKDGIHDIDISEGDEVAP 200
>gi|118791132|ref|XP_319581.3| AGAP008837-PA [Anopheles gambiae str. PEST]
gi|116117453|gb|EAA14834.3| AGAP008837-PA [Anopheles gambiae str. PEST]
Length = 207
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
++A GE GDRVQFTE+I KN+ LY+ RNG L AAA+FTR LA LR ++PY VN+
Sbjct: 45 MLATMGEAGDRVQFTEYISKNILLYRMRNGYELGPKAAAHFTRRNLADYLRSRTPYHVNL 104
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+ GYD+ GP L+YIDY+A V A GYG F S+ DR+ H ++ +EA ++ K
Sbjct: 105 LVGGYDEVDGPQLHYIDYLANSLPVKHGAHGYGGMFVNSIFDRYHHDKITQKEAYEIFRK 164
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ EI RL++ PNF + ++DKDG +
Sbjct: 165 GVTEIHKRLILNLPNFKVAVIDKDGVK 191
>gi|19113828|ref|NP_592916.1| 20S proteasome component beta 4 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1172609|sp|Q09720.1|PSB4_SCHPO RecName: Full=Probable proteasome subunit beta type-4
gi|914882|emb|CAA90462.1| 20S proteasome component beta 4 (predicted) [Schizosaccharomyces
pombe]
Length = 194
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
+L+SH L+ GE GD F E+I N+SLY R+ + L+ A A+FTR +LAT+LR +
Sbjct: 37 ILNSHNLMLYCGEAGDTTNFAEYIAANISLYTLRHNLNLSPEATASFTRKQLATSLRSRK 96
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VNILLAGY+ G P L+++DY+AT +V A GY S++ LS+ DR++ ++++E
Sbjct: 97 PYQVNILLAGYETNLGKPELFWLDYLATCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
AV ++ C E++ R+ + F+ K+VDKDG RE
Sbjct: 157 AVRIMKLCFDELKKRMPIDFKGFICKVVDKDGIRE 191
>gi|71032145|ref|XP_765714.1| proteasome subunit beta type 2 [Theileria parva strain Muguga]
gi|68352671|gb|EAN33431.1| proteasome subunit beta type 2, putative [Theileria parva]
Length = 212
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 105/154 (68%), Gaps = 1/154 (0%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M +D KL+ +G DR QF E+I+K+V ++++ +TT + A+F R +LA LRKS
Sbjct: 37 MQIDDSKLLLLAGPCCDRNQFGEYIRKSVHYHRYKTSFDMTTKSMAHFVRQQLAEYLRKS 96
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY V++L+AG+D GP LY+IDY+A+ +VD+A GYG +F ++D+ +H ++VEEA
Sbjct: 97 PYQVDLLVAGFDN-NGPKLYWIDYLASSTEVDRAVHGYGGHFLRGLLDKEYHENLTVEEA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
V L+ KC E+++R ++A NF K++DK+G +
Sbjct: 156 VSLLKKCRHEVKNRFLLAQSNFRAKVIDKNGIHD 189
>gi|452980299|gb|EME80060.1| hypothetical protein MYCFIDRAFT_56567 [Pseudocercospora fijiensis
CIRAD86]
Length = 203
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 101/160 (63%), Gaps = 2/160 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD +QF E++Q NV+LY RNG LT ++F R ELA +LR +SP
Sbjct: 38 LNDHTLMAFSGEAGDTIQFAEYVQANVALYSMRNGSDLTPTETSSFVRSELAKSLRSRSP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL GYD P L++IDY+A+ V AA GY Y+ LS +D+H H ++ E+
Sbjct: 98 YTVNLLLGGYDVHANKPQLFWIDYLASCAPVPYAAHGYAQYYCLSTLDKHHHPDITFEQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRES 160
+ ++ C E++ RL + ++K+VDKDG RE + S
Sbjct: 158 MKILRMCTDELQRRLPIDFKGVLVKVVDKDGIREVEYDTS 197
>gi|225709330|gb|ACO10511.1| Proteasome subunit beta type-2 [Caligus rogercresseyi]
Length = 204
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 104/153 (67%), Gaps = 2/153 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L +H+L++A G+ GD +F EF+ KN+ LY+ RN ++ + AANF R LA +LR ++P
Sbjct: 38 LSNHRLMSAIGQSGDTTEFAEFMTKNIQLYKLRNAYEMSPSEAANFIRRNLADSLRSRNP 97
Query: 62 YMVNILLAGYDKETGPS-LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ VN+L+AG+DK++ + LY +DY+A + K A GYG FS ++DRH+ M+VEE
Sbjct: 98 FHVNLLVAGFDKKSEQAELYSMDYLAGMVKTAHATHGYGGVFSSGILDRHYKPDMTVEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+L+ CI EI+ RL++ PNF ++IV KDG +
Sbjct: 158 YNLLKNCIAEIQKRLIINLPNFGVQIVTKDGIK 190
>gi|345567847|gb|EGX50749.1| hypothetical protein AOL_s00054g835 [Arthrobotrys oligospora ATCC
24927]
Length = 200
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD +QF EFIQ N LY R+ L ++ A+F R ELA++LR + P
Sbjct: 43 LNDHTLLAFSGEAGDTIQFAEFIQANTQLYTMRHSSDLPVSSVASFVRTELASSLRSRHP 102
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ GYD K+ P LY++DY+A+ ++ AA GY Y+ LS++D H+ GM VEE
Sbjct: 103 YTVNMLIGGYDTKKEEPQLYWLDYLASSAEIPYAAHGYAQYYCLSILDAHYKKGMGVEEV 162
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L+ C E++ R+ + ++KIVDKDG RE
Sbjct: 163 AGLMKDCHEELKRRMPIDFKGLLVKIVDKDGIRE 196
>gi|121706829|ref|XP_001271642.1| proteasome component Pre1, putative [Aspergillus clavatus NRRL 1]
gi|119399790|gb|EAW10216.1| proteasome component Pre1, putative [Aspergillus clavatus NRRL 1]
Length = 182
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 98/154 (63%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L+A SGE GD VQF E+IQ N++LY RN L A ANF RGELA +LR ++P
Sbjct: 17 LSQHTLMAYSGEAGDTVQFAEYIQANIALYTMRNDTELRPKAVANFVRGELARSLRSRNP 76
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T P LY+IDY++ L V AA GY Y+ LS++D+H H +S+E+
Sbjct: 77 YTVNLLLGGVDTITQEPHLYWIDYLSALAPVPYAAHGYAQYYCLSILDKHHHPDISLEQG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ C E++ RL + ++K+V KDG E
Sbjct: 137 MKLLQLCTDELKRRLPIDYKGVLVKVVTKDGVEE 170
>gi|344229512|gb|EGV61397.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
Length = 194
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 106/156 (67%), Gaps = 3/156 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-K 59
VL++H L+A +GE GD VQF E++Q N+ LY R N I L+ A A+F R +LAT++R +
Sbjct: 37 VLNAHNLVAFTGESGDTVQFAEYMQANIQLYSMRENDIELSPKATASFVRSQLATSIRSR 96
Query: 60 SPYMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
PY VN+LL G+D K P+L YIDY+ T + AA GY +++ +S++D+H+ + M+++
Sbjct: 97 KPYQVNVLLGGFDTKSNEPTLNYIDYLGTQAVLPYAAHGYAAFYCMSLLDKHYRTNMTLD 156
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ + L+D CI E+ +R+ + +K+VDKDG RE
Sbjct: 157 DGLKLLDMCIRELETRMPMDFKGCYVKVVDKDGVRE 192
>gi|225709636|gb|ACO10664.1| Proteasome subunit beta type-2 [Caligus rogercresseyi]
gi|225710786|gb|ACO11239.1| Proteasome subunit beta type-2 [Caligus rogercresseyi]
Length = 204
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 104/153 (67%), Gaps = 2/153 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L +H L++A G+ GD +F EF+ KN+ LY+ RN ++ + AANF R LA +LR ++P
Sbjct: 38 LSNHLLMSAIGQSGDTTEFAEFMTKNIQLYKLRNAYEMSPSEAANFIRRNLADSLRSRNP 97
Query: 62 YMVNILLAGYDKETGPS-LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ VN+L+AG+DK++ + LY +DY+A + K + A GYG FS ++DRH+ M+VEE
Sbjct: 98 FHVNLLVAGFDKKSEQAELYSMDYLAGMVKTEHATHGYGGVFSSGILDRHYKPDMTVEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+L+ CI EI+ RL++ PNF ++IV KDG +
Sbjct: 158 YNLLKNCIAEIQKRLIINLPNFGVQIVTKDGIK 190
>gi|225680870|gb|EEH19154.1| proteasome component Pre1 [Paracoccidioides brasiliensis Pb03]
Length = 210
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 103/165 (62%), Gaps = 2/165 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ NV LY RN L+ +A ANF RGEL+ +LR + P
Sbjct: 45 LNKHTLMAFSGEAGDTVQFAEYIQANVQLYSMRNETELSPSAVANFVRGELSRSLRSRRP 104
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A L V AA GY Y+ LS++D+H H ++ E+
Sbjct: 105 YTVNLLLGGVDPITEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITFEQG 164
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTP 165
+ L+ C E++ RL + ++K+V K+G E + S + P
Sbjct: 165 LKLLQMCTDELKRRLPIDFKGVLVKVVRKEGIEEVDFDNSKQVAP 209
>gi|302696841|ref|XP_003038099.1| hypothetical protein SCHCODRAFT_83883 [Schizophyllum commune H4-8]
gi|300111796|gb|EFJ03197.1| hypothetical protein SCHCODRAFT_83883 [Schizophyllum commune H4-8]
Length = 194
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 105/156 (67%), Gaps = 4/156 (2%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
L H L+A SGEPGD VQF E++++N+ LYQ R+ L +AAA++ R LA +LR +
Sbjct: 37 TLSPHLLMAYSGEPGDTVQFAEYVERNIRLYQIRHHYALRPSAAASWIRRSLAESLRSRH 96
Query: 61 PYMVNILLAGYD--KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
PY VN+L+ G+D +ET LY+IDY+ T V AA GYGSYF+LS DR+ + +VE
Sbjct: 97 PYSVNLLVGGFDTAQETA-HLYWIDYLGTSTPVPFAAHGYGSYFALSTFDRYHNPDATVE 155
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
E + + +CI E+ RLVV+P + +KIVDK+G RE
Sbjct: 156 EGLATLKRCIDEVALRLVVSPGKYKVKIVDKNGIRE 191
>gi|225711516|gb|ACO11604.1| Proteasome subunit beta type-2 [Caligus rogercresseyi]
Length = 204
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 104/153 (67%), Gaps = 2/153 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L +H L++A G+ GD +F EF+ KN+ LY+ RN ++ + AANF R LA +LR ++P
Sbjct: 38 LSNHLLMSAIGQSGDTTEFAEFMTKNIQLYKLRNAYEMSPSEAANFIRRNLADSLRSRNP 97
Query: 62 YMVNILLAGYDKETGPS-LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ VN+L+AG+DK++ + LY +DY+A + K + A GYG FS ++DRH+ M+VEE
Sbjct: 98 FHVNLLVAGFDKKSEQAELYSMDYLAGMVKTEHATHGYGGVFSSGILDRHYKPDMTVEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+L+ CI EI+ RL++ PNF ++IV KDG +
Sbjct: 158 YNLLKNCIAEIQKRLIINLPNFGVQIVTKDGIK 190
>gi|226292572|gb|EEH47992.1| proteasome component C11 [Paracoccidioides brasiliensis Pb18]
Length = 182
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 103/165 (62%), Gaps = 2/165 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ NV LY RN L+ +A ANF RGEL+ +LR + P
Sbjct: 17 LNKHTLMAFSGEAGDTVQFAEYIQANVQLYSMRNETELSPSAVANFVRGELSRSLRSRRP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A L V AA GY Y+ LS++D+H H ++ E+
Sbjct: 77 YTVNLLLGGVDPITEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITFEQG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTP 165
+ L+ C E++ RL + ++K+V K+G E + S + P
Sbjct: 137 LKLLQMCTDELKRRLPIDFKGVLVKVVRKEGIEEVDFDNSKQVAP 181
>gi|240281182|gb|EER44685.1| proteasome component [Ajellomyces capsulatus H143]
Length = 227
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 102/160 (63%), Gaps = 2/160 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H ++A SGE GD VQF E+IQ NV LY RN L+ +A A+F RGELA +LR + P
Sbjct: 62 LSKHTIMAFSGEAGDTVQFAEYIQANVQLYSMRNEAELSPSAVASFVRGELARSLRSRRP 121
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A L V AA GY Y+ LS++D+H H +++E+
Sbjct: 122 YTVNLLLGGVDPITEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLEQG 181
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRES 160
+ L++ C E++ RL + ++K+V KDG E + S
Sbjct: 182 LKLLEMCTDELKRRLPIDFKGVLVKVVRKDGIEEVPFDNS 221
>gi|126320684|ref|XP_001370298.1| PREDICTED: proteasome subunit beta type-2-like [Monodelphis
domestica]
Length = 183
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 101/143 (70%), Gaps = 1/143 (0%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGY 71
GE GD VQF E+IQKNV LY+ RNG L+ AAANFT LA LR ++PY VN+LLA Y
Sbjct: 31 GEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTHRNLAYYLRTRTPYHVNLLLATY 90
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
D+ GP+LYY+ Y+A L K AA GYG++ +LS++D + ++ EEAV+L+ KC+ E+
Sbjct: 91 DEHEGPALYYMGYLAALAKAPFAAHGYGAFLTLSILDHFYKPSITREEAVELLKKCLEEL 150
Query: 132 RSRLVVAPPNFVIKIVDKDGARE 154
+ R ++ P+F ++I+DKDG +
Sbjct: 151 QKRFILNLPSFSVRIIDKDGIHD 173
>gi|402082040|gb|EJT77185.1| proteasome subunit beta type-2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H LIA SGEPGD +QF E+IQ N LY RN L+ +A A+F RGELA++LR + P
Sbjct: 38 LNKHTLIAFSGEPGDTIQFAEYIQANAKLYSMRNETDLSPSALAHFVRGELASSLRSRKP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A L V AA GY Y+ LS++D+H H +++ +
Sbjct: 98 YTVNLLLGGVDPITHKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLHQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ +++ C E++ RL + V+K V KDG
Sbjct: 158 IKILNMCTDELKRRLPIDFKGMVVKAVTKDG 188
>gi|358389631|gb|EHK27223.1| hypothetical protein TRIVIDRAFT_73156 [Trichoderma virens Gv29-8]
Length = 203
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ+N LY RN L+ + A+F RGELAT+LR ++P
Sbjct: 38 LNKHTLLAFSGEAGDTVQFAEYIQRNAQLYSMRNETELSPSGLAHFVRGELATSLRSRNP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ G D TG PSLY++DY+A+L +V AA GY Y+ LS++D+H H +++ +
Sbjct: 98 YNVNLLMGGVDPITGKPSLYWLDYLASLAEVPYAAHGYAQYYCLSLLDKHHHPDITLGQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ L+ CI E++ RL + V+K + DG
Sbjct: 158 IKLMTMCIDELKRRLPIDFKGMVVKAIKADG 188
>gi|255723451|ref|XP_002546659.1| proteasome component C11 [Candida tropicalis MYA-3404]
gi|240130790|gb|EER30353.1| proteasome component C11 [Candida tropicalis MYA-3404]
Length = 194
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 104/155 (67%), Gaps = 3/155 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KS 60
L++H LIA +GE GD VQF E++Q N+ LY R N I L+ A A+F R +LAT+LR +
Sbjct: 38 LNAHNLIAYTGEAGDTVQFAEYVQANIQLYSMRENDIELSPKATASFVRTQLATSLRSRK 97
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN L+ GYD +T PSL +IDY+ T ++ A GY ++++ S++D+H+ M+VEE
Sbjct: 98 PYQVNCLIGGYDVKTNKPSLNWIDYLGTQVELPYGAHGYAAFYTTSLLDKHYRKEMTVEE 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+D C+ E++ R+ + IK+VDKDG R+
Sbjct: 158 GLKLMDMCVEELQRRMPIDFKGVYIKVVDKDGIRQ 192
>gi|340522873|gb|EGR53106.1| 20S proteasome beta-type subunit [Trichoderma reesei QM6a]
Length = 201
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ+N LY RN L+ + A+F RGELAT+LR ++P
Sbjct: 36 LNKHTLLAFSGEAGDTVQFAEYIQRNAQLYSMRNETELSPSGLAHFVRGELATSLRSRNP 95
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ G D TG PSLY++DY+A+L +V AA GY Y+ LS++D+H H +++ +
Sbjct: 96 YNVNLLMGGVDPITGKPSLYWLDYLASLAEVPYAAHGYAQYYCLSLLDKHHHPDITLGQG 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ L+ CI E++ RL + V+K + DG
Sbjct: 156 IKLMTMCIDELKRRLPIDFKGMVVKAIKADG 186
>gi|325092320|gb|EGC45630.1| proteasome component [Ajellomyces capsulatus H88]
Length = 805
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 104/164 (63%), Gaps = 2/164 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H ++A SGE GD VQF E+IQ NV LY RN L+ +A A+F RGELA +LR + P
Sbjct: 17 LSKHTIMAFSGEAGDTVQFAEYIQANVQLYSMRNEAELSPSAVASFVRGELARSLRSRRP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A L V AA GY Y+ LS++D+H H +++E+
Sbjct: 77 YTVNLLLGGVDPITEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLEQG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDT 164
+ L++ C E++ RL + ++K+V KDG E + S + T
Sbjct: 137 LKLLEMCTDELKRRLPIDFKGVLVKVVRKDGIEEVPFDNSKQAT 180
>gi|149238379|ref|XP_001525066.1| proteasome component C11 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451663|gb|EDK45919.1| proteasome component C11 [Lodderomyces elongisporus NRRL YB-4239]
Length = 197
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 105/154 (68%), Gaps = 3/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KS 60
L++H LIA +GE GD +QF+E+ Q N+ LY R + + L+ A A++ R LAT++R +
Sbjct: 38 LNAHNLIAFTGESGDTIQFSEYAQANIQLYSMREDEVELSPKATASYVRNLLATSIRSRK 97
Query: 61 PYMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN L+AGYD K PSLYYIDY+ TL ++ A GY ++++ S++D+H+ GMSVE+
Sbjct: 98 PYQVNCLIAGYDIKTQKPSLYYIDYLGTLVELPYGAHGYAAFYTTSLLDKHYRKGMSVEQ 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
++L+ C+ E++ R+ + +K+VDKDG R
Sbjct: 158 GLELMKMCVEELQKRMPIDFKGVYVKVVDKDGIR 191
>gi|408388365|gb|EKJ68051.1| hypothetical protein FPSE_11862 [Fusarium pseudograminearum CS3096]
Length = 213
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ+N LY RN L+ +A A+F RGELAT+LR + P
Sbjct: 48 LNKHTLLAFSGEAGDTVQFAEYIQRNAQLYSMRNESDLSPSALAHFVRGELATSLRSRKP 107
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ G D TG PSLY++DY+A+L +V AA GY Y+ LS++D+H H +++ +
Sbjct: 108 YNVNLLMGGVDPITGKPSLYWLDYLASLAEVPYAAHGYAQYYCLSILDKHHHPDITLHQG 167
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ ++ CI E++ RL + V+K V DG
Sbjct: 168 IKILTMCIDELKRRLPIDFKGMVVKAVKADG 198
>gi|367024525|ref|XP_003661547.1| hypothetical protein MYCTH_2301064 [Myceliophthora thermophila ATCC
42464]
gi|347008815|gb|AEO56302.1| hypothetical protein MYCTH_2301064 [Myceliophthora thermophila ATCC
42464]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N LY RN L+ +A A+F RGELA++LR + P
Sbjct: 38 LNKHTLMAFSGEAGDTVQFAEYIQANAQLYSMRNDTDLSPSALAHFVRGELASSLRSRKP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L V AA GY Y+ LS++D+H H +S++
Sbjct: 98 YSVNLLLGGVDPITHKPSLYWLDYLASLAPVPYAAHGYAQYYCLSLLDKHHHPDISLDRG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++L+ C E++ RL + ++K+V KDG E
Sbjct: 158 LELLRLCADELKRRLPIDFKGLIVKVVTKDGIEE 191
>gi|325179900|emb|CCA14302.1| proteasome subunit beta type2 putative [Albugo laibachii Nc14]
Length = 207
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 104/167 (62%), Gaps = 15/167 (8%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LDSHKL+ +G DRV+F+E+IQKN+ LY+ RNG+ L +A AN+ RGELA LR+ PY
Sbjct: 38 LDSHKLLLGAGPQSDRVEFSEYIQKNLKLYELRNGVRLDGSATANYIRGELARYLRQGPY 97
Query: 63 MVNILLAGYD------------KETG---PSLYYIDYIATLHKVDKAAFGYGSYFSLSMM 107
VN+L+ D K G PSL++IDY+ ++ K+D GYGS F LS++
Sbjct: 98 QVNLLVGAVDQVSKAEAQLTPEKAAGTPIPSLHWIDYLGSMVKMDYGVHGYGSNFCLSIL 157
Query: 108 DRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
D+ + +++EEA ++ C E+ +R +V ++ K++D +G RE
Sbjct: 158 DKEWQPNLTLEEATRILKLCRNELDTRFLVRSGKWIFKVIDGNGIRE 204
>gi|68467871|ref|XP_722094.1| hypothetical protein CaO19.11508 [Candida albicans SC5314]
gi|68468188|ref|XP_721933.1| hypothetical protein CaO19.4025 [Candida albicans SC5314]
gi|46443876|gb|EAL03155.1| hypothetical protein CaO19.4025 [Candida albicans SC5314]
gi|46444042|gb|EAL03320.1| hypothetical protein CaO19.11508 [Candida albicans SC5314]
gi|238882904|gb|EEQ46542.1| proteasome component C11 [Candida albicans WO-1]
Length = 196
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 105/155 (67%), Gaps = 3/155 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KS 60
L++H LIA +GE GD VQF E++Q N+ LY R N I L+ A A+F R +LA++LR +
Sbjct: 38 LNAHNLIAYTGEAGDTVQFAEYVQANIQLYSMRENDIELSPKATASFVRNQLASSLRSRK 97
Query: 61 PYMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN L+ GYD K+ PSL +IDY+ T ++ A GY ++++ S++D+H+ M+VE+
Sbjct: 98 PYQVNCLIGGYDVKKNEPSLNWIDYLGTQVELPYGAHGYAAFYTTSLLDKHYRKDMTVED 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+D C+ E+++R+ + IK+VDKDG R+
Sbjct: 158 GLKLMDMCVKELQTRMPIDFKGVYIKVVDKDGIRQ 192
>gi|241956129|ref|XP_002420785.1| proteasome subunit, putative [Candida dubliniensis CD36]
gi|223644127|emb|CAX41870.1| proteasome subunit, putative [Candida dubliniensis CD36]
Length = 196
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 105/155 (67%), Gaps = 3/155 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KS 60
L++H LIA +GE GD VQF E++Q N+ LY R N I L+ A A+F R +LA++LR +
Sbjct: 38 LNAHNLIAYTGEAGDTVQFAEYVQANIQLYSMRENDIELSPKATASFVRNQLASSLRSRK 97
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN L+ GYD +T PSL +IDY+ T ++ A GY ++++ S++D+H+ M+VE+
Sbjct: 98 PYQVNCLIGGYDVKTNQPSLNWIDYLGTQVELPYGAHGYAAFYTTSLLDKHYRKDMTVED 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+D C+ E+++R+ + IK+VDKDG R+
Sbjct: 158 GLKLMDMCVKELQTRMPIDFKGVYIKVVDKDGIRQ 192
>gi|154279090|ref|XP_001540358.1| proteasome component Pre1 [Ajellomyces capsulatus NAm1]
gi|150412301|gb|EDN07688.1| proteasome component Pre1 [Ajellomyces capsulatus NAm1]
Length = 203
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 102/160 (63%), Gaps = 2/160 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H ++A SGE GD VQF E+IQ NV LY RN L+ +A A+F RGELA +LR + P
Sbjct: 38 LSKHTIMAFSGEAGDTVQFAEYIQANVQLYSMRNEAELSPSAVASFVRGELARSLRSRRP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A L V AA GY Y+ LS++D+H H +++E+
Sbjct: 98 YTVNLLLGGVDPITEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLEQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRES 160
+ L++ C E++ RL + ++K+V KDG E + S
Sbjct: 158 LMLLEMCTDELKRRLPIDFKGVLVKVVRKDGIEEVPFDNS 197
>gi|367017710|ref|XP_003683353.1| hypothetical protein TDEL_0H02830 [Torulaspora delbrueckii]
gi|359751017|emb|CCE94142.1| hypothetical protein TDEL_0H02830 [Torulaspora delbrueckii]
Length = 196
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
+L H L++ SGE GD VQF E+IQ N+ LY R + L+ A A+F R ELA +LR +
Sbjct: 37 LLSPHNLMSFSGEAGDTVQFAEYIQANMQLYSVRENVELSPHATASFVRQELAKSLRSRK 96
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+L+ GYD + G P LY IDY+ T ++ AA GY +++ S++DRH+ M+ +E
Sbjct: 97 PYQVNVLIGGYDSKAGKPELYQIDYLGTNVELPYAAHGYAGFYTFSLLDRHYRPDMTEQE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
++L+ KC+ E+ R+ + ++K+VDKDG R
Sbjct: 157 GLELLKKCVEELNRRMPIDFKGVIVKVVDKDGVR 190
>gi|449295235|gb|EMC91257.1| hypothetical protein BAUCODRAFT_117595 [Baudoinia compniacensis
UAMH 10762]
Length = 203
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 101/160 (63%), Gaps = 2/160 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
L+ + L+A SGEPGD VQF E+IQ N+ LY RN L+ ++F R ELA +LR +S
Sbjct: 37 TLNKNTLMAFSGEPGDTVQFAEYIQANIQLYSMRNSSDLSPFEVSSFVRAELAKSLRSRS 96
Query: 61 PYMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL GYD + P LY+IDY+A+ V AA GY Y+ LS++D+H H +S E+
Sbjct: 97 PYTVNLLLGGYDSIKQKPELYWIDYLASSAPVPYAAHGYAQYYCLSILDKHHHPDISFEQ 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+ ++ C E++ RL + +KI+DKDG RE + +
Sbjct: 157 GMKILRMCTDELKRRLPIDFKGVNVKIIDKDGIREEPYSD 196
>gi|347841546|emb|CCD56118.1| Probable proteasome subunit beta type 2 [Botryotinia fuckeliana]
Length = 237
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 105/166 (63%), Gaps = 3/166 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD +QF E+IQ N LY RN I L+ +A A+F RGELA +LR + P
Sbjct: 72 LNQHTLMAFSGEAGDTIQFAEYIQANAQLYSMRNNIDLSPSAVAHFVRGELAQSLRSRKP 131
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L + AA GY Y+ LS++D+H H + E+
Sbjct: 132 YNVNLLLGGVDPITDKPSLYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDIDFEQG 191
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK-DTP 165
+ ++ C E++ RL + +K++ K+G +E + +S + D P
Sbjct: 192 MKVLRMCTDELKRRLPIDFKGMTVKVITKEGIKELDYDDSARIDCP 237
>gi|156053566|ref|XP_001592709.1| hypothetical protein SS1G_05630 [Sclerotinia sclerotiorum 1980]
gi|154703411|gb|EDO03150.1| hypothetical protein SS1G_05630 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 203
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 105/167 (62%), Gaps = 3/167 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
L+ H L+A SGE GD +QF E+IQ N LY RN I L+ +A A+F RGELA +LR +
Sbjct: 37 TLNQHTLMAFSGEAGDTIQFAEYIQANAQLYSMRNNIDLSPSAVAHFVRGELAQSLRSRK 96
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL G D T PSLY++DY+A+L + AA GY Y+ LS++D+H H + E+
Sbjct: 97 PYNVNLLLGGVDPITDKPSLYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDIDFEQ 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK-DTP 165
+ ++ C E++ RL + +K++ K+G +E + +S + D P
Sbjct: 157 GMKVLRMCTDELKRRLPIDFKGMTVKVITKEGIKELDYDDSARIDCP 203
>gi|340904823|gb|EGS17191.1| hypothetical protein CTHT_0065060 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 256
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N LY RN L+ AA A+F RGELA++LR + P
Sbjct: 17 LNKHTLLAFSGEAGDTVQFAEYIQANSQLYSMRNETDLSPAALAHFVRGELASSLRSRHP 76
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D +G PSLY+IDY+A+L V AA GY Y+ LS++D+H H + +++
Sbjct: 77 YSVNLLLGGVDPISGKPSLYWIDYLASLAPVPYAAHGYAQYYCLSLLDKHHHPDIDLDQG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
L+D C E++ RL + V+K V K+G
Sbjct: 137 RKLLDMCADELKRRLPIDFKGLVVKAVTKNG 167
>gi|336266886|ref|XP_003348210.1| hypothetical protein SMAC_04055 [Sordaria macrospora k-hell]
Length = 209
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N LY RN L+ +A A+F RGELAT+LR + P
Sbjct: 44 LNKHTLMAFSGEAGDTVQFAEYIQANAQLYSMRNETDLSPSALAHFVRGELATSLRSRKP 103
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H +++ +
Sbjct: 104 YNVNLLLGGVDPITHKPSLYWLDYLASLAEVPYAAHGYAQYYCLSILDKHHHPDITLHQG 163
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ L++ C E++ RL + +K V KDG
Sbjct: 164 IKLLNMCTDELKRRLPIDFKGMTVKAVTKDG 194
>gi|380091145|emb|CCC11352.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 203
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N LY RN L+ +A A+F RGELAT+LR + P
Sbjct: 38 LNKHTLMAFSGEAGDTVQFAEYIQANAQLYSMRNETDLSPSALAHFVRGELATSLRSRKP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H +++ +
Sbjct: 98 YNVNLLLGGVDPITHKPSLYWLDYLASLAEVPYAAHGYAQYYCLSILDKHHHPDITLHQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ L++ C E++ RL + +K V KDG
Sbjct: 158 IKLLNMCTDELKRRLPIDFKGMTVKAVTKDG 188
>gi|167517217|ref|XP_001742949.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778048|gb|EDQ91663.1| predicted protein [Monosiga brevicollis MX1]
Length = 193
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 94/155 (60%), Gaps = 1/155 (0%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-K 59
M L ++ +G G F + + KN+ L RNG + A ANF R LA ALR +
Sbjct: 36 MKLTDKTMMLLAGSVGACSNFGDLMAKNIKLNGIRNGYDHSPAECANFVRKSLADALRTR 95
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
Y VN+LL GYD GP LYYIDY + KV A GYGS+F+L+ +DRH+ GM+ EE
Sbjct: 96 EAYQVNLLLGGYDAHDGPELYYIDYFGAMAKVPFGAHGYGSFFTLATLDRHYKEGMNFEE 155
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
A D++ KCI E+R+R +V P F ++++D++G E
Sbjct: 156 AKDVMRKCIEEVRTRFIVNMPAFTVRVIDREGTHE 190
>gi|399216561|emb|CCF73248.1| unnamed protein product [Babesia microti strain RI]
Length = 211
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
+ +D+ KLI +G GDR QF E+I+KN+ +F+N P + A ANF R ELA LR+S
Sbjct: 37 LKVDNDKLILLAGPSGDREQFGEYIRKNIHFQRFKNSYPTSIGATANFARQELAYFLRES 96
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY V++L+AG++++T P LY+IDY+A+ +V KA GYG F ++D+++ ++ E+A
Sbjct: 97 PYQVDMLIAGFEQDT-PKLYWIDYLASSMEVCKAVHGYGGNFVRGLVDKYYTCDITKEQA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++L+ K E+R R +V+ NFV+K++DKDG
Sbjct: 156 IELMKKIRDELRFRFLVSQSNFVVKLIDKDG 186
>gi|164661781|ref|XP_001732013.1| hypothetical protein MGL_1281 [Malassezia globosa CBS 7966]
gi|159105914|gb|EDP44799.1| hypothetical protein MGL_1281 [Malassezia globosa CBS 7966]
Length = 198
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 104/159 (65%), Gaps = 6/159 (3%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR----NGIPLTTAAAANFTRGELATAL 57
VL ++A +GE GD +QF E+I++N+ LY R N I L AAA++ R +LA A+
Sbjct: 37 VLSKRLVMAYAGESGDTIQFAEYIERNMRLYSIRLMLSNNIDLRPKAAASWIRSQLAEAI 96
Query: 58 R-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGM 115
R + PY VN+LL GYD+ T P+LY++DY+ TL +V AA GY SY +LS MDR+ M
Sbjct: 97 RSRHPYQVNLLLGGYDEPTSEPALYWVDYLGTLVQVPFAAHGYASYLTLSTMDRYHRPDM 156
Query: 116 SVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
S++E + L+ +CI E+R R V+ NF ++++ +DG E
Sbjct: 157 SLDEGLKLLKQCIEEMRKRFVIDVNNFNVRVITRDGVHE 195
>gi|389635121|ref|XP_003715213.1| proteasome subunit beta type-2 [Magnaporthe oryzae 70-15]
gi|351647546|gb|EHA55406.1| proteasome subunit beta type-2 [Magnaporthe oryzae 70-15]
Length = 203
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H +IA SGEPGD +QF E+I N LY RN L+ +A A++ RGELA++LR + P
Sbjct: 38 LNKHTMIAFSGEPGDTIQFAEYIMANAKLYSMRNETDLSPSALAHYVRGELASSLRSRKP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A L V AA GY Y+ LS++D+H H +++ +
Sbjct: 98 YTVNLLLGGVDPITHKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLHQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ ++ C E++ RL + V+K V KDG R+
Sbjct: 158 IKILTMCTDELKRRLPIDFKGMVVKAVTKDGIRD 191
>gi|440468038|gb|ELQ37223.1| proteasome component C11 [Magnaporthe oryzae Y34]
gi|440487532|gb|ELQ67316.1| proteasome component C11 [Magnaporthe oryzae P131]
Length = 233
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H +IA SGEPGD +QF E+I N LY RN L+ +A A++ RGELA++LR + P
Sbjct: 68 LNKHTMIAFSGEPGDTIQFAEYIMANAKLYSMRNETDLSPSALAHYVRGELASSLRSRKP 127
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A L V AA GY Y+ LS++D+H H +++ +
Sbjct: 128 YTVNLLLGGVDPITHKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLHQG 187
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ ++ C E++ RL + V+K V KDG R+
Sbjct: 188 IKILTMCTDELKRRLPIDFKGMVVKAVTKDGIRD 221
>gi|452837651|gb|EME39593.1| hypothetical protein DOTSEDRAFT_56927 [Dothistroma septosporum
NZE10]
Length = 203
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N+ LY RN LT A+F R ELA +LR +SP
Sbjct: 38 LNKHTLMAFSGEAGDTVQFAEYIQANIQLYSMRNSTDLTPYETASFVRSELAKSLRSRSP 97
Query: 62 YMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G+D P LY+IDY+A+ + AA GY Y+ LS++D+H H +S E+
Sbjct: 98 YNVNLLLGGFDDISNKPQLYWIDYLASCAPLPYAAHGYAQYYCLSILDKHHHPDISFEQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ ++ C E++ RL + ++K+V KDG RE
Sbjct: 158 MKILRMCTDELKRRLPIDFKGVLVKVVTKDGIRE 191
>gi|453082164|gb|EMF10212.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 203
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 102/160 (63%), Gaps = 2/160 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A GE GD +QF +++Q N +LY RNG LT A+F R ELA +LR +SP
Sbjct: 38 LNKHTLMAFVGEAGDTIQFADYVQANTALYGIRNGNELTPNETASFVRSELAKSLRSRSP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL GYD P+L++IDY+A+ + AA GY Y+ L+++D+H H +S E+
Sbjct: 98 YTVNLLLGGYDTHHNKPTLHWIDYLASCAPLPYAAHGYAQYYCLAILDKHHHPDISYEQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRES 160
+ ++ C E++ RL + ++K++DKDG RE + +S
Sbjct: 158 MKILRMCTDELKRRLPIDFKGVLVKVIDKDGVREVDYDDS 197
>gi|241604606|ref|XP_002405427.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
gi|215500625|gb|EEC10119.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
Length = 203
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 101/156 (64%), Gaps = 7/156 (4%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNG----IPLTTAAAANFTRGELATALR 58
L + L+A GE GD VQF EFI KN+ LY+ RNG P ++ F + A
Sbjct: 38 LSDNLLMAVCGEAGDTVQFAEFIAKNIQLYKMRNGRSLLPPFLFSSILEFIVENWSFA-- 95
Query: 59 KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSV 117
+PY VN+LLAG+DK+ P L+Y+DY+AT+ KV A GYG++F +S++DR++ M+
Sbjct: 96 ATPYSVNLLLAGFDKQAAQPELFYMDYLATMAKVPYGAHGYGAFFLISVLDRYYREDMNE 155
Query: 118 EEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
EEAVDL+ KC+ E++ R +V P F +++VDK+G R
Sbjct: 156 EEAVDLLKKCVFEVQKRFLVNLPAFKVQVVDKNGIR 191
>gi|242019946|ref|XP_002430419.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212515549|gb|EEB17681.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 206
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L ++A G+ GD QF+EFI KN+ LY+ RNG L+ +AA+NFTR LA LR ++P
Sbjct: 38 LTDKMVMAVCGDSGDTSQFSEFISKNIQLYKMRNGYALSPSAASNFTRRNLADYLRSRTP 97
Query: 62 YMVNILLAGYDKETGP-SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL GYD T LY+ DY+A+L K A G+G +F LS+MD+ +++EE
Sbjct: 98 YNVNLLLGGYDDTTDEFELYFCDYLASLVKTPYAVHGFGGHFCLSIMDQLHRKDLTIEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+++ KCI EI R+V+ PNF +++V ++G +
Sbjct: 158 YEVLSKCIREIHKRVVINLPNFKVQVVTRNGIK 190
>gi|403220573|dbj|BAM38706.1| proteasome subunit beta type 2 [Theileria orientalis strain
Shintoku]
Length = 208
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 109/165 (66%), Gaps = 3/165 (1%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M +D KL+ +G GDR QF E+I+K+V +++ +TT + A+F R +LA LRKS
Sbjct: 37 MQIDDSKLLLLAGPLGDRSQFGEYIRKSVHYLRYKTSFNMTTKSMAHFVRQQLAEYLRKS 96
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY V++L+AGYD + GP L+++DY+A+ +D+A GYG ++D+ +H ++VE+A
Sbjct: 97 PYQVDLLVAGYDFD-GPQLFWVDYLASSTSIDRAVHGYGGNLLRGLLDKEYHENLTVEDA 155
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTP 165
V L+ KC E+++R +++ NF K++DK+G + + S +DTP
Sbjct: 156 VRLLKKCRHEVKNRFLLSQSNFRAKVIDKNGVHDVSI--SDEDTP 198
>gi|302911258|ref|XP_003050453.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731390|gb|EEU44740.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 203
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 98/151 (64%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ+N LY RN L+ + A+F RGELAT+LR + P
Sbjct: 38 LNKHTLLAFSGEAGDTVQFAEYIQRNAQLYSMRNESDLSPSGLAHFVRGELATSLRSRKP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ G D TG PSLY++DY+A+L V AA GY Y+ LS++D+H H +++ +
Sbjct: 98 YNVNLLMGGVDPITGKPSLYWLDYLASLADVPYAAHGYAQYYCLSILDKHHHPDITLGQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ ++ C E++ RL + V+K V DG
Sbjct: 158 IKILTMCTDELKRRLPIDFKGMVVKAVKADG 188
>gi|213410379|ref|XP_002175959.1| proteasome component C11 [Schizosaccharomyces japonicus yFS275]
gi|212004006|gb|EEB09666.1| proteasome component C11 [Schizosaccharomyces japonicus yFS275]
Length = 196
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 101/155 (65%), Gaps = 2/155 (1%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-K 59
+ L+SH L+ SGE GD F E+I+ NV+LY RN + L A A+FTR +LAT+LR +
Sbjct: 36 IALNSHNLMLYSGEAGDTTNFAEYIKANVALYTMRNDLVLGPDATASFTRKQLATSLRSR 95
Query: 60 SPYMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
PY VNILLAGYDK E P LY++DY+A+ V A+ GY ++ +S DR++ +S+E
Sbjct: 96 KPYQVNILLAGYDKGEKKPKLYWMDYLASCVPVPYASHGYAMFYCMSTFDRYYRPDLSLE 155
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+A+ ++ C E + RL + F+ K++D++G R
Sbjct: 156 DAIHVMKLCFAEFKKRLPIDYKGFICKVIDENGIR 190
>gi|448532264|ref|XP_003870391.1| Pre1 beta 4 subunit of the 20S proteasome [Candida orthopsilosis Co
90-125]
gi|380354746|emb|CCG24261.1| Pre1 beta 4 subunit of the 20S proteasome [Candida orthopsilosis]
Length = 194
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 107/155 (69%), Gaps = 3/155 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KS 60
L++H LIA +GE GD +QF E++Q N+ LY R + + ++ A A++ R +LAT++R +
Sbjct: 38 LNAHNLIAFTGEAGDTIQFAEYVQANIQLYSMREDDVEMSPKATASYVRNQLATSIRSRK 97
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN L+AGYD +T PSL YIDY+ T ++ A GY +++++S++D+H+ M++++
Sbjct: 98 PYQVNCLIAGYDTKTDKPSLNYIDYLGTQVELPYGAHGYAAFYAMSLLDKHYRKDMNIDD 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+D CI E+++R+ + +K+VDKDG R+
Sbjct: 158 GLRLMDMCIKELQTRMPIDFKGVYVKVVDKDGIRK 192
>gi|260941416|ref|XP_002614874.1| hypothetical protein CLUG_04889 [Clavispora lusitaniae ATCC 42720]
gi|238851297|gb|EEQ40761.1| hypothetical protein CLUG_04889 [Clavispora lusitaniae ATCC 42720]
Length = 221
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL+ H L+A +GE GD VQF E++Q N+ LY R L+ A A+F R +LAT++R +
Sbjct: 64 VLNPHNLVAYTGESGDTVQFAEYVQANIQLYTMRENHELSPQATASFVRNQLATSIRSRK 123
Query: 61 PYMVNILLAGYDKETGP-SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+L+ GYD +TG SL +IDY+ T ++ AA GY +++ +S+ DRH+ + MSV++
Sbjct: 124 PYQVNVLIGGYDTKTGAASLNWIDYLGTQVELPYAAHGYAAFYCMSLFDRHYRADMSVDD 183
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
++L+ + + E+ +R+ V +K+VDKDG R
Sbjct: 184 GLELMRRGLKELETRMPVDFKGVYVKVVDKDGIR 217
>gi|358059834|dbj|GAA94397.1| hypothetical protein E5Q_01048 [Mixia osmundae IAM 14324]
Length = 656
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 98/155 (63%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
V+ + A SGE GD VQF E+++ N+ L RN L AA+A + R LA +LR +
Sbjct: 475 VIGKRLVFAYSGESGDTVQFAEYVEANLKLNAIRNHTELRPAASAAWIRKTLADSLRSRK 534
Query: 61 PYMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL G+D ++ P LY+IDY+ T V AA GYGSYF LS MDR+ + S+EE
Sbjct: 535 PYQVNLLLGGFDPTDSTPHLYWIDYLGTKATVPYAAHGYGSYFCLSTMDRYHNPNCSLEE 594
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ +CI E+ +R +V F +++VDKDG RE
Sbjct: 595 GLALLARCINELETRFIVNLGKFQVRVVDKDGVRE 629
>gi|225562344|gb|EEH10623.1| proteasome component C11 [Ajellomyces capsulatus G186AR]
Length = 805
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 97/148 (65%), Gaps = 2/148 (1%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNIL 67
+A SGE GD VQF E+IQ NV LY RN L+ +A A+F RGELA +LR + PY VN+L
Sbjct: 1 MAFSGEAGDTVQFAEYIQANVQLYSMRNEAELSPSAVASFVRGELARSLRSRRPYTVNLL 60
Query: 68 LAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L G D T PSLY++DY+A L V AA GY Y+ LS++D+H H +++E+ + L++
Sbjct: 61 LGGVDPITEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLEQGLKLLEM 120
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C E++ RL + ++K+V KDG E
Sbjct: 121 CTDELKRRLPIDFKGVLVKVVRKDGIEE 148
>gi|126132438|ref|XP_001382744.1| hypothetical protein PICST_55763 [Scheffersomyces stipitis CBS
6054]
gi|126094569|gb|ABN64715.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 194
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 101/155 (65%), Gaps = 3/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-K 59
VL+ H L+A +GE GD VQF E++Q N+ LY R N I L+ A A+F R +LAT++R +
Sbjct: 37 VLNKHNLVAYTGESGDTVQFAEYVQANIQLYSMRENDIELSPKATASFVRNQLATSIRSR 96
Query: 60 SPYMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
PY VN+L+ GYD K PSL +IDY+ T ++ A GY ++++ S++D+H+ M VE
Sbjct: 97 KPYQVNVLIGGYDTKSNTPSLNWIDYLGTQVELPYGAHGYAAFYANSLLDKHYKKNMDVE 156
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ + L+ C+ E+ +R+ + +K+VDKDG R
Sbjct: 157 QGLALLKMCLKELETRMPIDFKGVYVKVVDKDGIR 191
>gi|348667598|gb|EGZ07423.1| hypothetical protein PHYSODRAFT_288888 [Phytophthora sojae]
Length = 197
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 98/153 (64%), Gaps = 4/153 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LD HK++ SG DR+ F E+IQKN+ LY+ RNG+ L A AN+ RGELA LR++PY
Sbjct: 38 LDEHKVMVTSGPQSDRLAFGEYIQKNMKLYELRNGVTLNGPATANYVRGELARFLRRAPY 97
Query: 63 MVNILLAGYD----KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
VN+L+ D ++ PSL++IDY+ ++ KV+ A GYG++F LS+ DR + M+++
Sbjct: 98 QVNVLIGAVDATPEQKAEPSLHWIDYLGSMVKVNFGAHGYGAHFCLSIFDREWKPDMTLD 157
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
EA ++ KC E+ R +V + ++D +G
Sbjct: 158 EAKSVLKKCRAELDMRFLVRNGQWAYTLIDANG 190
>gi|156099356|ref|XP_001615680.1| 20S proteasome beta 4 subunit [Plasmodium vivax Sal-1]
gi|148804554|gb|EDL45953.1| 20S proteasome beta 4 subunit, putative [Plasmodium vivax]
Length = 195
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 95/145 (65%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ +K + G GDR+QF EFI+KNV LYQ++N L + A FTR LA LR++PY
Sbjct: 39 INGNKCLLLGGSIGDRIQFGEFIRKNVHLYQYQNSTDLFVKSFAFFTRKNLAYYLRRNPY 98
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN L+AGYD + G LY+ DY++ + V+K A GYG+Y ++D+++H M++EEA+
Sbjct: 99 EVNCLIAGYDNKDGYQLYWCDYLSNMDAVNKGAHGYGAYLVNGILDKYYHENMNLEEALL 158
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIV 147
+ KC E++ R ++ N+ ++I+
Sbjct: 159 IFKKCFEELKKRFLLTQINYELRIM 183
>gi|118376618|ref|XP_001021490.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89303257|gb|EAS01245.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 191
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 100/152 (65%), Gaps = 1/152 (0%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP 61
+LD +K++A SGE R+QF+++I KN++L ++RNG T A F R ELA +R P
Sbjct: 37 LLDQNKVMALSGEQAYRLQFSDYIAKNIALNKYRNGTEFNTKECAEFVRSELAYGIRNGP 96
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
+MVN L+AG+D P LY++DY+ TL K KAA GY ++F LS +D + ++++E +
Sbjct: 97 FMVNCLIAGFDNNQ-PQLYWVDYMGTLVKSVKAAHGYAAHFVLSTLDHDYKPNLTLDEGI 155
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
++ +CI E+++R +++ +F+ KIV G +
Sbjct: 156 AIIKRCINELKTRFLISQSHFIAKIVTPAGIQ 187
>gi|363748210|ref|XP_003644323.1| hypothetical protein Ecym_1264 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887955|gb|AET37506.1| hypothetical protein Ecym_1264 [Eremothecium cymbalariae
DBVPG#7215]
Length = 195
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H LI+ +GE GD VQF+E+IQ N+ LY R L+ A ++F R ELA +LR + P
Sbjct: 38 LSPHSLISFTGESGDTVQFSEYIQANMQLYMIRENYELSPQAQSSFVRNELAKSLRSRKP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ VN+L+ GYD K+ P LY IDY+ T ++ AA GY +++ S++D H+ MS EE
Sbjct: 98 FQVNVLIGGYDVKKEKPELYQIDYLGTKVELPYAAHGYSGFYTFSLLDHHYRPDMSTEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ C+ E+ R+ + ++K+VDKDG RE
Sbjct: 158 LKLLKLCVEELERRMPIDFKGVLVKVVDKDGIRE 191
>gi|322696165|gb|EFY87961.1| putative proteasome subunit beta type-2 [Metarhizium acridum CQMa
102]
Length = 182
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 98/151 (64%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ+N LY RN L+ + A+F RGELAT+LR + P
Sbjct: 17 LNKHTLMAFSGEAGDTVQFAEYIQRNAQLYSMRNETDLSPSGLAHFVRGELATSLRSRHP 76
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ G + TG P LY++DY+A+L +V AA GY Y+ LS++D+H H +++ +
Sbjct: 77 YNVNLLMGGVNPITGKPHLYWLDYLASLAEVPYAAHGYAQYYCLSILDKHHHPDITLGQG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ L+ C E++ RL + V+K + DG
Sbjct: 137 IKLLTMCTDELKRRLPIDFKGMVVKAIKTDG 167
>gi|82752562|ref|XP_727351.1| proteasome subunit beta type 2 [Plasmodium yoelii yoelii 17XNL]
gi|23483153|gb|EAA18916.1| proteasome subunit beta type 2 [Plasmodium yoelii yoelii]
Length = 195
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 97/148 (65%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ +K + G GDR+QF EFI+KNV LYQ++N L + A FTR LA LR++PY
Sbjct: 39 INGNKCLLLGGSIGDRIQFGEFIRKNVHLYQYQNSTSLYVKSFAYFTRKNLAYYLRRNPY 98
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN L+AGYD + G LY+ DY++ + ++K A GYG+Y +++D+++H M++EEA+
Sbjct: 99 EVNCLIAGYDDKDGYQLYWCDYLSNMDAINKGAHGYGAYLVNAILDKYYHEDMNLEEALV 158
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKD 150
+ KC E++ R ++ N+ ++I+ +
Sbjct: 159 IFKKCFEELKKRFLLTQINYELRIMSNN 186
>gi|354543265|emb|CCE39983.1| hypothetical protein CPAR2_100210 [Candida parapsilosis]
Length = 194
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 107/155 (69%), Gaps = 3/155 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KS 60
L++H LIA +GE GD +QF E++Q N+ LY R + + ++ A A++ R +LAT++R +
Sbjct: 38 LNAHNLIAFTGEAGDTIQFAEYVQANIQLYSMREDDVEMSPKATASYVRNQLATSIRSRK 97
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN L+AGYD +T PSL YIDY+ T ++ A GY +++++S++D+H+ M+V++
Sbjct: 98 PYQVNCLIAGYDTKTDKPSLNYIDYLGTQVELPYGAHGYAAFYTMSLLDKHYRKDMNVDD 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+D CI E+++R+ + IK+VDK+G ++
Sbjct: 158 GLRLMDMCIKELQTRMPIDFKGVYIKVVDKNGIKK 192
>gi|322703780|gb|EFY95384.1| proteasome component C11 [Metarhizium anisopliae ARSEF 23]
Length = 182
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 98/151 (64%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ+N LY RN L+ + A+F RGELAT+LR + P
Sbjct: 17 LNKHTLMAFSGEAGDTVQFAEYIQRNAQLYSMRNETDLSPSGLAHFVRGELATSLRSRHP 76
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ G + TG P LY++DY+A+L +V AA GY Y+ LS++D+H H +++ +
Sbjct: 77 YNVNLLMGGVNPITGKPHLYWLDYLASLAEVPYAAHGYAQYYCLSILDKHHHPDITLGQG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ L+ C E++ RL + V+K + DG
Sbjct: 137 IKLLTMCTDELKRRLPIDFKGMVVKAIKADG 167
>gi|393215279|gb|EJD00770.1| 20S proteasome subunit [Fomitiporia mediterranea MF3/22]
Length = 205
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 106/165 (64%), Gaps = 13/165 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H ++ SGEPGD V F E+I++N+ L+Q R+ L ++AA + R LA +LR +SP
Sbjct: 38 LGPHLVMTYSGEPGDTVHFAEYIERNLRLHQIRHHHELRPSSAAAWIRRALADSLRSRSP 97
Query: 62 YMVNILLAGYD----------KETG--PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDR 109
Y VN+L+ G+D +E G P+LY+IDY+ TL +V AA GYGSYF LS++DR
Sbjct: 98 YAVNLLVGGFDTSAAAIEEGKEELGGTPNLYWIDYLGTLAEVPFAAHGYGSYFVLSLLDR 157
Query: 110 HFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ + ++EE + + +CI E+ RL+ N+ +K+VDKDG RE
Sbjct: 158 YHNPDATLEEGLATLKRCIDEVAKRLIDGVSNYKVKVVDKDGVRE 202
>gi|448079193|ref|XP_004194334.1| Piso0_004821 [Millerozyma farinosa CBS 7064]
gi|359375756|emb|CCE86338.1| Piso0_004821 [Millerozyma farinosa CBS 7064]
Length = 196
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 102/156 (65%), Gaps = 3/156 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-K 59
VL+ H LIA +GE GD V F E+IQ N+ LY R N I L+ A A+F R +LAT++R +
Sbjct: 37 VLNPHNLIAYTGEAGDTVNFAEYIQANIQLYSMRENDIELSPKATASFIRNQLATSIRSR 96
Query: 60 SPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
PY VN+LL GYD + P+L +IDY+ T ++ AA GY +++ S+ DRH+ GM+V+
Sbjct: 97 KPYQVNVLLGGYDVASNTPTLNWIDYLGTQVELPYAAHGYAAFYCTSLFDRHYKKGMTVD 156
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
E ++L+ + E+ R+ + + +KI+DKDG R+
Sbjct: 157 EGLELLKMSLKELEIRMPLDFKGYYVKIIDKDGVRD 192
>gi|302501612|ref|XP_003012798.1| hypothetical protein ARB_01049 [Arthroderma benhamiae CBS 112371]
gi|291176358|gb|EFE32158.1| hypothetical protein ARB_01049 [Arthroderma benhamiae CBS 112371]
Length = 178
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 92/137 (67%), Gaps = 2/137 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF EFIQ N LY RN L +A A+F RGELA +LR +SP
Sbjct: 17 LNKHTLMAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRSP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H +S E+
Sbjct: 77 YTVNLLLGGVDPITEKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISFEQG 136
Query: 121 VDLVDKCILEIRSRLVV 137
+ L++ C E++ RL +
Sbjct: 137 LKLLEMCSDELKRRLPI 153
>gi|302662696|ref|XP_003022999.1| hypothetical protein TRV_02820 [Trichophyton verrucosum HKI 0517]
gi|291186975|gb|EFE42381.1| hypothetical protein TRV_02820 [Trichophyton verrucosum HKI 0517]
Length = 178
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 92/137 (67%), Gaps = 2/137 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF EFIQ N LY RN L +A A+F RGELA +LR +SP
Sbjct: 17 LNKHTLMAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRSP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+L +V AA GY Y+ LS++D+H H +S E+
Sbjct: 77 YTVNLLLGGVDPITEKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISFEQG 136
Query: 121 VDLVDKCILEIRSRLVV 137
+ L++ C E++ RL +
Sbjct: 137 LKLLEMCSDELKRRLPI 153
>gi|407843693|gb|EKG01568.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
Length = 206
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 103/160 (64%), Gaps = 11/160 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRK-- 59
LDSHK++A +GE G RV F E+I+ N++L + R +G + T+AAA+F R LA ALR
Sbjct: 39 LDSHKVVACAGENGPRVNFVEYIKCNMALKRMREHGRVIRTSAAASFMRNALAGALRSRD 98
Query: 60 SPYMVNILLAGYDKE--------TGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
Y+VN LLAGYD TGP LYY+DY+ T+ +V GYG+ F ++M+DR +
Sbjct: 99 GAYLVNCLLAGYDVAASSDDDIATGPHLYYMDYLGTMQEVPYGCHGYGASFVIAMLDRLW 158
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++ +EAVDL+ KC E++ R+V++ F+ K V ++G
Sbjct: 159 RPDLTAQEAVDLMQKCCDEVKKRVVISNDKFICKAVTENG 198
>gi|71406250|ref|XP_805679.1| proteasome beta 2 subunit [Trypanosoma cruzi strain CL Brener]
gi|71415362|ref|XP_809750.1| proteasome beta 2 subunit [Trypanosoma cruzi strain CL Brener]
gi|70869178|gb|EAN83828.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
gi|70874180|gb|EAN87899.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
Length = 206
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 103/160 (64%), Gaps = 11/160 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRK-- 59
LDSHK++A +GE G RV F E+I+ N++L + R +G + T+AAA+F R LA ALR
Sbjct: 39 LDSHKVVACAGENGPRVNFVEYIKCNMALKRMREHGRVIRTSAAASFMRNALAGALRSRD 98
Query: 60 SPYMVNILLAGYDKE--------TGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
Y+VN LLAGYD TGP LYY+DY+ T+ +V GYG+ F ++M+DR +
Sbjct: 99 GAYLVNCLLAGYDVAASSDDDIATGPHLYYMDYLGTMQEVPYGCHGYGASFVIAMLDRLW 158
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++ +EAVDL+ KC E++ R+V++ F+ K V ++G
Sbjct: 159 RPDLTAQEAVDLMQKCCDEVKKRVVISNDKFICKAVTENG 198
>gi|402221532|gb|EJU01601.1| proteasome component Pre1 [Dacryopinax sp. DJM-731 SS1]
Length = 195
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L + ++A GEPGD +QF E++++N+ LY R+ L A+AA + R LA +LR + P
Sbjct: 39 LGPNLMMAYGGEPGDTIQFAEYVERNLRLYHIRHNHTLRPASAAAWIRRSLADSLRSRHP 98
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN++L GYD + P+LY+IDY+ T+ +V AA GYG+YF+L+ +DR ++EE
Sbjct: 99 YSVNLILGGYDHTSSMPNLYWIDYLGTMVEVPFAAHGYGAYFALATLDRFHDPEATLEEG 158
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++ + +CI E+ RL+++ F++KI+D++G RE
Sbjct: 159 LETLKRCINEVEKRLIISLGKFMVKIIDRNGMRE 192
>gi|367037387|ref|XP_003649074.1| hypothetical protein THITE_2107253 [Thielavia terrestris NRRL 8126]
gi|346996335|gb|AEO62738.1| hypothetical protein THITE_2107253 [Thielavia terrestris NRRL 8126]
Length = 203
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 97/151 (64%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N LY RN L+ +A A+F RGELA++LR + P
Sbjct: 38 LNKHTLMAFSGEAGDTVQFAEYIQANAQLYSMRNETDLSPSALAHFVRGELASSLRSRKP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A L V AA GY Y+ LS++D+H H +++ +
Sbjct: 98 YNVNLLLGGVDPITHKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLVQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ ++ C E++ RL + V+K V KDG
Sbjct: 158 MKILTLCTDELKRRLPIDFKGMVVKAVTKDG 188
>gi|301110258|ref|XP_002904209.1| proteasome subunit beta type-2, putative [Phytophthora infestans
T30-4]
gi|66270177|gb|AAY43418.1| 20S proteasome subunit [Phytophthora infestans]
gi|262096335|gb|EEY54387.1| proteasome subunit beta type-2, putative [Phytophthora infestans
T30-4]
Length = 197
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
LD HK++ SG DR+ F E+IQKN+ LY+ RNG+ L A AN+ RGELA LR++PY
Sbjct: 38 LDEHKVMVTSGPQSDRLAFGEYIQKNMKLYELRNGVTLNGPATANYVRGELARFLRRAPY 97
Query: 63 MVNILLAGYD----KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
VN+L+ D ++ PSL++IDY+ ++ KV+ A GYG++F LS+ DR + M+++
Sbjct: 98 QVNLLIGAVDASPEQKAEPSLHWIDYLGSMVKVNFGAHGYGAHFCLSIFDREWKPDMTLD 157
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
EA + + KC E+ R +V + ++D G
Sbjct: 158 EAKETLKKCRAELDMRFLVRNGQWAYTLIDAGG 190
>gi|401838998|gb|EJT42383.1| PRE1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 198
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 96/154 (62%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L++ +GE GD VQF E+IQ N+ LY R L+ A ++F R ELA ++R + P
Sbjct: 38 LSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRKELAKSIRSRRP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ GYDK P LY IDY+ T ++ A GY +++ S++DRH+ M+ EE
Sbjct: 98 YQVNVLIGGYDKRRNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDRHYRPDMTTEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++L+ C+ E+ R+ + ++KIVDKDG R+
Sbjct: 158 LNLLKLCVQELEKRMPMDFKGVIVKIVDKDGVRQ 191
>gi|410084030|ref|XP_003959592.1| hypothetical protein KAFR_0K01010 [Kazachstania africana CBS 2517]
gi|372466184|emb|CCF60457.1| hypothetical protein KAFR_0K01010 [Kazachstania africana CBS 2517]
Length = 195
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L++ +GE GD VQF E+IQ N+ LY R L+ A ++F R ELA ++R + P
Sbjct: 38 LSPHNLMSFAGEAGDTVQFAEYIQANMQLYAIRENFELSPNAVSSFVRNELAKSIRSRKP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ GYD K P LY IDY+ T ++ AA GY +++ S++DRH+ MS+E+
Sbjct: 98 YQVNVLIGGYDIKNNKPELYQIDYLGTKVELPYAAHGYSGFYTFSLLDRHYRPDMSLEDG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ L+ CI E+ R+ V ++K+VDKDG R
Sbjct: 158 LKLLKLCIAELDKRMPVDFKGVIVKVVDKDGIR 190
>gi|398395621|ref|XP_003851269.1| proteasome core particle subunit beta 4, partial [Zymoseptoria
tritici IPO323]
gi|339471148|gb|EGP86245.1| hypothetical protein MYCGRDRAFT_44624 [Zymoseptoria tritici IPO323]
Length = 202
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
L++H L+A SGE GD VQF E++Q NV LY RN LT A+F R ELA +LR ++
Sbjct: 36 TLNTHTLMAFSGEAGDTVQFAEYVQANVQLYSMRNSNHLTPYETASFIRSELAKSLRSRN 95
Query: 61 PYMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL GYD P L++IDY+A+ + AA GY Y+ LS +D+H H ++ E+
Sbjct: 96 PYNVNLLLGGYDTIADKPQLFWIDYLASCAPLPYAAHGYAQYYCLSTLDKHHHPDITFEQ 155
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ ++ C E++ R+ V ++K++ KDG RE
Sbjct: 156 GMKILRMCTDELKRRMPVDFKGVLVKVITKDGVRE 190
>gi|255717008|ref|XP_002554785.1| KLTH0F13750p [Lachancea thermotolerans]
gi|238936168|emb|CAR24348.1| KLTH0F13750p [Lachancea thermotolerans CBS 6340]
Length = 195
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 98/154 (63%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L+A SGE GD VQF+E+IQ N+ LY R L+ A ++F R ELA ++R + P
Sbjct: 38 LSEHVLMAYSGEAGDAVQFSEYIQANIQLYSIRENYELSPKAVSSFVRQELAKSIRSRRP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ GYD + P LY IDY+ T ++ AA GY +++ S++D H+ M+VEE
Sbjct: 98 YQVNVLIGGYDAHQKKPELYQIDYLGTKVELPYAAHGYSGFYTFSLLDHHYRPDMTVEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ CI E++ R+ V ++K+VD++G RE
Sbjct: 158 LKLLKLCIEELQRRMPVDFKGVLVKVVDENGVRE 191
>gi|45184842|ref|NP_982560.1| AAR019Wp [Ashbya gossypii ATCC 10895]
gi|44980451|gb|AAS50384.1| AAR019Wp [Ashbya gossypii ATCC 10895]
gi|374105759|gb|AEY94670.1| FAAR019Wp [Ashbya gossypii FDAG1]
Length = 195
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 98/154 (63%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L++ SGEPGD VQF+E+IQ N+ LY R L+ A A++ R ELA +LR + P
Sbjct: 38 LSPHSLMSFSGEPGDAVQFSEYIQANMQLYMIRENYELSPQAQASYVRSELAKSLRSRKP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ VN+L+ GYD + P LY IDY+ T ++ AA GY +++ S++D H+ M+ EE
Sbjct: 98 FQVNVLIGGYDTRAEKPELYQIDYLGTKVELPYAAHGYSGFYTFSLLDHHYRPDMTTEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ C+ E++ R+ + ++K+VDKDG R+
Sbjct: 158 LKLLKLCVEELQRRMPIDFKGVLVKVVDKDGIRD 191
>gi|407397527|gb|EKF27791.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi marinkellei]
Length = 206
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 103/160 (64%), Gaps = 11/160 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRK-- 59
LDSHK++A +GE G RV F E+I+ N++L + R +G + T+AAA+F R LA A+R
Sbjct: 39 LDSHKVVACTGENGPRVNFVEYIKCNMALKRMREHGRVIRTSAAASFMRNALAGAIRSRD 98
Query: 60 SPYMVNILLAGYDKE--------TGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
Y+VN LLAGYD TGP LYY+DY+ T+ +V GYG+ F ++M+DR +
Sbjct: 99 GAYLVNCLLAGYDVAASSEDDIATGPHLYYMDYLGTMQEVPYGCHGYGASFVIAMLDRLW 158
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++ +EAVDL+ KC E++ R+V++ F+ K V ++G
Sbjct: 159 RPDLTAQEAVDLMQKCCDEVKKRVVISNDKFICKAVTENG 198
>gi|160331745|ref|XP_001712579.1| prsB4 [Hemiselmis andersenii]
gi|159766028|gb|ABW98254.1| prsB4 [Hemiselmis andersenii]
Length = 193
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 95/148 (64%)
Query: 6 HKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVN 65
+K +A SG PGD +QFT+F+QK + LY + G+ L+T + AN R EL+ LRK+P +N
Sbjct: 41 NKFLAVSGYPGDVIQFTDFLQKTIQLYTLKTGLTLSTRSVANCIRKELSDCLRKNPININ 100
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
+ L G+DK G SLY+IDY+ +L ++D G+ S S +DR++ M+++EA++++
Sbjct: 101 LTLIGFDKIYGSSLYFIDYLGSLQRMDFCVQGHSSLILSSFLDRYYKQKMNLQEAIEIIK 160
Query: 126 KCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+C I+ R ++ ++ IVD+ G R
Sbjct: 161 RCANIIKKRFLIPQTKLLLNIVDEKGCR 188
>gi|6320849|ref|NP_010928.1| proteasome core particle subunit beta 4 [Saccharomyces cerevisiae
S288c]
gi|730378|sp|P22141.2|PSB4_YEAST RecName: Full=Proteasome subunit beta type-4; AltName:
Full=Macropain subunit C11; AltName: Full=Multicatalytic
endopeptidase complex subunit C11; AltName:
Full=Proteasome component C11; AltName: Full=Proteinase
YSCE subunit 11
gi|3114279|pdb|1RYP|K Chain K, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114293|pdb|1RYP|Y Chain Y, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513422|pdb|1G65|J Chain J, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513436|pdb|1G65|X Chain X, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11514001|pdb|1G0U|J Chain J, A Gated Channel Into The Proteasome Core Particle
gi|11514015|pdb|1G0U|X Chain X, A Gated Channel Into The Proteasome Core Particle
gi|14488815|pdb|1FNT|K Chain K, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488829|pdb|1FNT|Y Chain Y, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|20150386|pdb|1JD2|J Chain J, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150393|pdb|1JD2|Q Chain Q, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|75765709|pdb|1Z7Q|K Chain K, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765723|pdb|1Z7Q|Y Chain Y, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|93279377|pdb|2F16|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279391|pdb|2F16|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032211|pdb|2FAK|J Chain J, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032225|pdb|2FAK|X Chain X, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490852|pdb|2GPL|J Chain J, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490866|pdb|2GPL|X Chain X, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|178847469|pdb|2ZCY|J Chain J, Yeast 20s Proteasome:syringolin A-Complex
gi|178847483|pdb|2ZCY|X Chain X, Yeast 20s Proteasome:syringolin A-Complex
gi|178847511|pdb|3BDM|J Chain J, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847525|pdb|3BDM|X Chain X, Yeast 20s Proteasome:glidobactin A-Complex
gi|190016376|pdb|3D29|J Chain J, Proteasome Inhibition By Fellutamide B
gi|190016390|pdb|3D29|X Chain X, Proteasome Inhibition By Fellutamide B
gi|197725330|pdb|3E47|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725344|pdb|3E47|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939221|pdb|3DY3|J Chain J, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939235|pdb|3DY3|X Chain X, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939249|pdb|3DY4|J Chain J, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939263|pdb|3DY4|X Chain X, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828246|pdb|3GPJ|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828260|pdb|3GPJ|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588330|pdb|3GPT|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588344|pdb|3GPT|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588358|pdb|3GPW|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588372|pdb|3GPW|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588552|pdb|3HYE|J Chain J, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588566|pdb|3HYE|X Chain X, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508232|pdb|1VSY|K Chain K, Proteasome Activator Complex
gi|298508246|pdb|1VSY|Y Chain Y, Proteasome Activator Complex
gi|298508448|pdb|3L5Q|O Chain O, Proteasome Activator Complex
gi|298508462|pdb|3L5Q|1 Chain 1, Proteasome Activator Complex
gi|323462945|pdb|3NZJ|J Chain J, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462959|pdb|3NZJ|X Chain X, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462973|pdb|3NZW|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462987|pdb|3NZW|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463001|pdb|3NZX|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463015|pdb|3NZX|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|330689390|pdb|3MG4|J Chain J, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689404|pdb|3MG4|X Chain X, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361153|pdb|3MG0|J Chain J, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361167|pdb|3MG0|X Chain X, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361181|pdb|3MG6|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361195|pdb|3MG6|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361209|pdb|3MG7|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361223|pdb|3MG7|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361237|pdb|3MG8|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361251|pdb|3MG8|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|335892350|pdb|3OKJ|J Chain J, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892364|pdb|3OKJ|X Chain X, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780428|pdb|3OEU|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780442|pdb|3OEU|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780456|pdb|3OEV|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780470|pdb|3OEV|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610681|pdb|3TDD|J Chain J, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610695|pdb|3TDD|X Chain X, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545855|pdb|3SHJ|J Chain J, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545869|pdb|3SHJ|X Chain X, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|378792250|pdb|3UN4|J Chain J, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792264|pdb|3UN4|X Chain X, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792284|pdb|3UN8|J Chain J, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792298|pdb|3UN8|X Chain X, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980825|pdb|3SDI|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980839|pdb|3SDI|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980853|pdb|3SDK|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980867|pdb|3SDK|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550741|pdb|4GK7|J Chain J, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550755|pdb|4GK7|X Chain X, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403071957|pdb|4B4T|4 Chain 4, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|403072201|pdb|4G4S|K Chain K, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973869|pdb|4FZC|J Chain J, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973883|pdb|4FZC|X Chain X, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973897|pdb|4FZG|J Chain J, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973911|pdb|4FZG|X Chain X, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302348|pdb|4INR|J Chain J, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302362|pdb|4INR|X Chain X, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302376|pdb|4INT|J Chain J, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302390|pdb|4INT|X Chain X, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302404|pdb|4INU|J Chain J, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302418|pdb|4INU|X Chain X, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|311329|emb|CAA40149.1| proteinase yscE subunit 11 [Saccharomyces cerevisiae]
gi|603604|gb|AAB64545.1| Pre1p: 22.6 kDa subunit of proteinase yscE [Saccharomyces
cerevisiae]
gi|45269505|gb|AAS56133.1| YER012W [Saccharomyces cerevisiae]
gi|190405573|gb|EDV08840.1| 22.6 kDa proteasome subunit [Saccharomyces cerevisiae RM11-1a]
gi|207346028|gb|EDZ72648.1| YER012Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273753|gb|EEU08678.1| Pre1p [Saccharomyces cerevisiae JAY291]
gi|259145918|emb|CAY79178.1| Pre1p [Saccharomyces cerevisiae EC1118]
gi|285811635|tpg|DAA07663.1| TPA: proteasome core particle subunit beta 4 [Saccharomyces
cerevisiae S288c]
gi|323309365|gb|EGA62582.1| Pre1p [Saccharomyces cerevisiae FostersO]
gi|323333907|gb|EGA75296.1| Pre1p [Saccharomyces cerevisiae AWRI796]
gi|323337919|gb|EGA79158.1| Pre1p [Saccharomyces cerevisiae Vin13]
gi|323348955|gb|EGA83191.1| Pre1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355420|gb|EGA87244.1| Pre1p [Saccharomyces cerevisiae VL3]
gi|349577668|dbj|GAA22836.1| K7_Pre1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766037|gb|EHN07538.1| Pre1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299958|gb|EIW11050.1| Pre1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 198
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 96/154 (62%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L++ +GE GD VQF E+IQ N+ LY R L+ A ++F R ELA ++R + P
Sbjct: 38 LSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ GYDK+ P LY IDY+ T ++ A GY +++ S++D H+ M+ EE
Sbjct: 98 YQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+DL+ C+ E+ R+ + ++KIVDKDG R+
Sbjct: 158 LDLLKLCVQELEKRMPMDFKGVIVKIVDKDGIRQ 191
>gi|258597933|ref|XP_001348850.2| 20S proteasome beta 4 subunit, putative [Plasmodium falciparum 3D7]
gi|255528933|gb|AAN37289.2| 20S proteasome beta 4 subunit, putative [Plasmodium falciparum 3D7]
Length = 195
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 95/142 (66%)
Query: 6 HKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVN 65
+K + G GDR+QF EFI+KNV LYQ++N + + A FTR LA LR++P+ VN
Sbjct: 42 NKCLLLGGSIGDRLQFGEFIRKNVHLYQYQNNTDMFVKSFAFFTRKNLAYYLRRNPFEVN 101
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
L+AGYDK+ G LY+ DY++ + V+K A GYG+Y +++D+++H ++V+EA+D+
Sbjct: 102 CLIAGYDKKDGYQLYWCDYLSNMDSVNKGAHGYGAYLVSAILDKYYHENLTVDEALDIFK 161
Query: 126 KCILEIRSRLVVAPPNFVIKIV 147
C E++ R ++ N+ ++I+
Sbjct: 162 LCFEELKKRFLLTQINYELRIM 183
>gi|171693511|ref|XP_001911680.1| hypothetical protein [Podospora anserina S mat+]
gi|170946704|emb|CAP73507.1| unnamed protein product [Podospora anserina S mat+]
Length = 182
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 98/151 (64%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF ++IQ N LY RN L+ +A A+F RGELAT+LR ++P
Sbjct: 17 LNKHTLMAYSGEAGDTVQFADYIQANAQLYSMRNESDLSPSALAHFVRGELATSLRSRNP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T SLY++DY+A+L V AA GY Y+ LS++D+H H +++ +
Sbjct: 77 YNVNLLLGGVDPITHKSSLYWLDYLASLAPVPYAAHGYAQYYCLSILDKHHHPDITLGQG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ L+ C+ E++ RL + +K V KDG
Sbjct: 137 IKLLTLCVDELKRRLPIDFKGMTVKAVTKDG 167
>gi|378725544|gb|EHY52003.1| proteasome subunit beta type-2 [Exophiala dermatitidis NIH/UT8656]
Length = 203
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 97/151 (64%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ + L+A SGE GD +QF EFIQ N++LY RN L +A A+F R ELA +LR + P
Sbjct: 38 LNKNTLLAFSGEAGDTIQFAEFIQANIALYTMRNETDLGPSAVASFIRSELARSLRSRKP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A+ KV AA GY Y+ LS++D+H H +S E+
Sbjct: 98 YNVNLLLGGMDPITKQPSLYWLDYLASSAKVPYAAHGYAQYYCLSILDKHHHPDISFEQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ ++ C E++ RL + +K++ KDG
Sbjct: 158 MKILRMCTDELQRRLPIDFKGMTVKVIKKDG 188
>gi|50289565|ref|XP_447214.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526523|emb|CAG60147.1| unnamed protein product [Candida glabrata]
Length = 194
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
+L H L+ +GE GD VQF E+IQ N+ LY R L+ +A +++ R ELA ++R +
Sbjct: 37 LLSPHTLMTFTGEAGDTVQFAEYIQANMQLYSIRENYELSPSAVSSYVRQELAKSIRSRK 96
Query: 61 PYMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+L+ GYD K+ P LY IDY+ T + AA GY +++ S++D H+ M+ E
Sbjct: 97 PYQVNVLIGGYDTKKEKPELYQIDYLGTKVDLPYAAHGYSGFYTFSLLDHHYRPDMTTTE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++L+ CI E++ R+ + ++KIVDKDG RE
Sbjct: 157 GLELLKLCIAELQKRMPIDFKGVIVKIVDKDGVRE 191
>gi|50304199|ref|XP_452049.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641181|emb|CAH02442.1| KLLA0B11660p [Kluyveromyces lactis]
Length = 195
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 97/150 (64%), Gaps = 2/150 (1%)
Query: 6 HKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMV 64
H L++ SGE GD VQF E+IQ N+ LY R L+ AA++F R ELA +LR + P+ V
Sbjct: 41 HTLMSFSGEAGDTVQFAEYIQANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQV 100
Query: 65 NILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDL 123
N+L+ GYD K LY IDY+ T ++ AA GY +++ S++DRH+ ++V+EA+ L
Sbjct: 101 NVLIGGYDTKNEKAELYQIDYLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGL 160
Query: 124 VDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ +C+ E+ R+ V ++KIVDKDG R
Sbjct: 161 LKQCVQELELRMPVDFKGVIVKIVDKDGVR 190
>gi|346974240|gb|EGY17692.1| proteasome component C11 [Verticillium dahliae VdLs.17]
Length = 225
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N LY RN L+ +A ++F RGELA++LR + P
Sbjct: 60 LNKHTLMAFSGEAGDTVQFAEYIQANAQLYSMRNETDLSPSAISHFVRGELASSLRSRKP 119
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T P+LY++DY+A++ V AA GY Y+ LS++D+H H +++ +
Sbjct: 120 YNVNLLLGGVDPITLKPALYWMDYLASMAPVPYAAHGYAQYYCLSILDKHHHPDITLGQG 179
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ +++ C E++ R+ + ++K V KDG
Sbjct: 180 IKILNMCTDELKRRMPIDFKGMLVKAVTKDG 210
>gi|254582206|ref|XP_002497088.1| ZYRO0D15158p [Zygosaccharomyces rouxii]
gi|238939980|emb|CAR28155.1| ZYRO0D15158p [Zygosaccharomyces rouxii]
Length = 195
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L++ GE GD VQF E+IQ N+ LY R I L+ A ++F R ELA ++R + P
Sbjct: 38 LSPHNLMSFGGEAGDSVQFAEYIQANIQLYAIRENIELSPLAVSSFVRQELAKSIRSRKP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ GYD K+ P LY IDY+ ++ AA GY +++ S++D H+ M+ EE
Sbjct: 98 YQVNVLIGGYDSKKQKPELYQIDYLGIKVELPYAAHGYSGFYTFSLLDHHYRPDMTTEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ CI E+ R+ + ++KIVDKDG R+
Sbjct: 158 LKLLKMCIKELDKRMPIDFKGVMVKIVDKDGIRQ 191
>gi|302416735|ref|XP_003006199.1| proteasome component C11 [Verticillium albo-atrum VaMs.102]
gi|261355615|gb|EEY18043.1| proteasome component C11 [Verticillium albo-atrum VaMs.102]
Length = 182
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ N LY RN L+ +A ++F RGELA++LR + P
Sbjct: 17 LNKHTLMAFSGEAGDTVQFAEYIQANAQLYSMRNETDLSPSAISHFVRGELASSLRSRKP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T P+LY++DY+A++ V AA GY Y+ LS++D+H H +++ +
Sbjct: 77 YNVNLLLGGVDPITLKPALYWMDYLASMAPVPYAAHGYAQYYCLSILDKHHHPDITLGQG 136
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ +++ C E++ R+ + ++K V KDG
Sbjct: 137 IKILNMCTDELKRRMPIDFKGMLVKAVTKDG 167
>gi|221059017|ref|XP_002260154.1| 20S proteasome beta 4 subunit [Plasmodium knowlesi strain H]
gi|193810227|emb|CAQ41421.1| 20S proteasome beta 4 subunit, putative [Plasmodium knowlesi strain
H]
Length = 195
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 95/145 (65%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ +K + G GDR+QF EFI+KNV LYQ++N L + A FTR LA LR++PY
Sbjct: 39 INGNKCLLLGGSIGDRIQFGEFIRKNVHLYQYQNSTDLFVKSFAFFTRKNLAYYLRRNPY 98
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
VN L+AGYD + G LY+ DY++ + V+K A GYG+Y ++D+++H ++++EA+
Sbjct: 99 EVNCLIAGYDNKDGYQLYWCDYLSNMDAVNKGAHGYGAYLVNGILDKYYHENINLDEALL 158
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIV 147
+ KC E++ R ++ N+ ++I+
Sbjct: 159 IFKKCFEELKKRFLLTQINYELRIM 183
>gi|151944720|gb|EDN62979.1| 22.6 kDa proteasome subunit [Saccharomyces cerevisiae YJM789]
Length = 198
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 96/154 (62%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L++ +GE GD VQF E+IQ N+ LY R L+ A ++F R ELA ++R + P
Sbjct: 38 LSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ GYDK+ P LY IDY+ T ++ A GY +++ S++D H+ M+ EE
Sbjct: 98 YQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++L+ C+ E+ R+ + ++KIVDKDG R+
Sbjct: 158 LNLLKLCVQELEKRMPMDFKGVIVKIVDKDGIRQ 191
>gi|62088520|dbj|BAD92707.1| proteasome beta 2 subunit variant [Homo sapiens]
Length = 249
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 90/124 (72%), Gaps = 1/124 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 75 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 134
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ K
Sbjct: 135 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 194
Query: 127 CILE 130
C+ E
Sbjct: 195 CLEE 198
>gi|401626068|gb|EJS44033.1| pre1p [Saccharomyces arboricola H-6]
Length = 198
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L++ +GE GD QF E+IQ N+ LY R L+ A ++F R ELA ++R + P
Sbjct: 38 LSPHTLMSFAGEAGDTTQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRKP 97
Query: 62 YMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ GYDK + P LY IDY+ T ++ A GY +++ S++DRH+ M+ EE
Sbjct: 98 YQVNVLIGGYDKRKDKPELYQIDYLGTQVELPYGAHGYSGFYTFSILDRHYRPDMTTEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ C+ E+ R+ + ++KIVDKDG R+
Sbjct: 158 LSLLKICVQELERRMPMDFKGVIVKIVDKDGIRQ 191
>gi|156083220|ref|XP_001609094.1| proteasome beta 2 subunit [Babesia bovis T2Bo]
gi|154796344|gb|EDO05526.1| proteasome beta 2 subunit, putative [Babesia bovis]
Length = 218
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
M + K++ +G GDR QF++ I+ + ++++N L+T AAA+F R ELA LR+S
Sbjct: 38 MKIGDSKVMMLAGPLGDRSQFSKMIKATLDYHKYKNSKELSTNAAAHFVRLELAEYLRQS 97
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY V++L+AG D++ GP L++IDY+A+ + D A GYG + ++D+ + M+ EEA
Sbjct: 98 PYQVDMLIAGIDQD-GPKLFWIDYLASCTQADTAVHGYGGFLLRGLLDKEYKPNMTREEA 156
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 169
+ L+ KC E+++R +++ NF KI+DKDG + +KD V A
Sbjct: 157 IALLKKCRHEVQNRFLISQSNFAAKIIDKDGVHDV----DIKDDDVPEA 201
>gi|195147566|ref|XP_002014750.1| GL19338 [Drosophila persimilis]
gi|194106703|gb|EDW28746.1| GL19338 [Drosophila persimilis]
Length = 214
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 97/156 (62%), Gaps = 9/156 (5%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPY---- 62
LI+ +GE GD QFTEFI KN++LY+ RNG L+ AAA+FTR LA LR ++PY
Sbjct: 43 LISTTGESGDTEQFTEFISKNIALYKMRNGYDLSPRAAAHFTRKNLADYLRSRTPYQGLH 102
Query: 63 ----MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
+ + YD+ G L +IDY+A ++ A GYG+ F S+ DR++H ++ +
Sbjct: 103 VCRWVCFRIHQRYDETDGAELAFIDYLANAKSLNHAGHGYGAMFCSSIYDRYWHPNITQD 162
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
EA D+ KCI+EI+ RLVV NF + +VDK+G R
Sbjct: 163 EAYDIFKKCIVEIQKRLVVNLKNFNVSVVDKNGVRN 198
>gi|310794363|gb|EFQ29824.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 203
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ LIA SGE GD VQF ++IQ N LY RN L+ + ANF RGELA++LR + P
Sbjct: 38 LNKQTLIAYSGESGDTVQFADYIQANSQLYSMRNETDLSPSGLANFVRGELASSLRSRKP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T P+LY++DY+A+L + AA GY Y+ LS++D+H H +++ +
Sbjct: 98 YNVNLLLGGVDPITQKPALYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDITLGQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ +++ C E++ RL + +K V KDG
Sbjct: 158 IKILNMCTDELKRRLPIDFKGMTVKAVTKDG 188
>gi|50421075|ref|XP_459082.1| DEHA2D13904p [Debaryomyces hansenii CBS767]
gi|49654749|emb|CAG87250.1| DEHA2D13904p [Debaryomyces hansenii CBS767]
Length = 194
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 100/154 (64%), Gaps = 3/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KS 60
L++H L+A +GE GD VQF E+IQ N+ L+ R N + L+ A A+F R +LAT++R +
Sbjct: 38 LNTHNLVAFTGEAGDTVQFAEYIQANIQLHTMRENDVELSPKATASFVRNQLATSIRSRK 97
Query: 61 PYMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+L+ GYD PSL +IDY+ T ++ AA GY +++ S++DRH+ M +E
Sbjct: 98 PYQVNVLIGGYDVNNDQPSLNWIDYLGTQVELPYAAHGYAAFYCTSLLDRHYRKDMKFDE 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ L+ +C+ E+ +R+ + IK+VDK+G +
Sbjct: 158 GLKLLKECLKELETRMPIDFKGCYIKVVDKEGIK 191
>gi|261201492|ref|XP_002627146.1| proteasome component Pre1 [Ajellomyces dermatitidis SLH14081]
gi|239592205|gb|EEQ74786.1| proteasome component Pre1 [Ajellomyces dermatitidis SLH14081]
gi|239611637|gb|EEQ88624.1| proteasome component Pre1 [Ajellomyces dermatitidis ER-3]
gi|327348351|gb|EGE77208.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 182
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L+A SGE GD VQF E+IQ N LY RN L+ +A A+F RGELA +LR + P
Sbjct: 17 LSKHTLMAFSGEAGDTVQFAEYIQANAQLYSMRNESELSPSAVASFVRGELARSLRSRRP 76
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T PSLY++DY+A L V AA GY Y+ LS++D+H H +++E+
Sbjct: 77 YTVNLLLGGVDPLTEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLEQG 136
Query: 121 VDLVDKCILEIRSRLVV 137
+ L++ C E++ RL +
Sbjct: 137 LKLLEMCTDELKRRLPI 153
>gi|444319602|ref|XP_004180458.1| hypothetical protein TBLA_0D04430 [Tetrapisispora blattae CBS 6284]
gi|387513500|emb|CCH60939.1| hypothetical protein TBLA_0D04430 [Tetrapisispora blattae CBS 6284]
Length = 195
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L+A SGE GD V F E+IQ NV LY R L+ A ++F R ELA ++R + P
Sbjct: 38 LSPHSLMAFSGEAGDTVNFAEYIQANVQLYTIRENNELSPQAVSSFVRKELAKSIRSRKP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ GYD + P LY IDY+ T ++ AA GY +++ S++D H+ M+ EE
Sbjct: 98 YQVNVLIGGYDSTSKKPQLYQIDYLGTKVELPYAAHGYSGFYTFSLLDHHYRPDMTKEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+DL+ KCI E++ R+ + ++KIVD++G
Sbjct: 158 LDLLKKCIEELQKRMPIDFKGVLVKIVDENG 188
>gi|365987183|ref|XP_003670423.1| hypothetical protein NDAI_0E03630 [Naumovozyma dairenensis CBS 421]
gi|343769193|emb|CCD25180.1| hypothetical protein NDAI_0E03630 [Naumovozyma dairenensis CBS 421]
Length = 195
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L++ SGE GD VQF E+IQ N+ LY R L+ A ++F R ELA ++R + P
Sbjct: 38 LSPHILMSFSGEAGDTVQFAEYIQANIQLYAMREDYELSPHAVSSFVRQELAKSIRSRRP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y N+L+ G+D K+ P LY IDY+ T ++ AA GY +++ S++DRH+ M+ EE
Sbjct: 98 YQANVLIGGFDTKKDTPGLYQIDYLGTKVELPYAAHGYSGFYTFSLLDRHYRPDMTTEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ CI E+ R+ V +K+VDKDG R+
Sbjct: 158 LKLLKLCITELEKRMPVDFKGVFVKVVDKDGIRQ 191
>gi|380475294|emb|CCF45323.1| proteasome subunit beta type-2 [Colletotrichum higginsianum]
Length = 203
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ LIA SGE GD VQF ++IQ N LY RN L+ + ANF RGELA++LR + P
Sbjct: 38 LNKQTLIAYSGESGDTVQFADYIQANSQLYSMRNETDLSPSGLANFVRGELASSLRSRKP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G D T P+LY++DY+A+L + AA GY Y+ LS++D+H H +++ +
Sbjct: 98 YNVNLLLGGVDPITQKPALYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDITLGQG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ +++ C E++ RL + +K V KDG
Sbjct: 158 IKILNLCTDELKRRLPIDFKGMTVKAVTKDG 188
>gi|391343044|ref|XP_003745825.1| PREDICTED: proteasome subunit beta type-2-like [Metaseiulus
occidentalis]
Length = 199
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 96/148 (64%), Gaps = 2/148 (1%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNIL 67
+A +GE GD VQF ++I KN+ L++ RNG L+ AAANFTR LA +LR ++ Y ++L
Sbjct: 44 MAVAGESGDTVQFADYIAKNIQLFKMRNGYGLSPKAAANFTRKNLADSLRTRNAYRCDLL 103
Query: 68 LAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L G+D + P LY++DY+ +L KV AA GYG FS+ ++D + + M+VEEA L+
Sbjct: 104 LGGFDSHSKEPELYWVDYLGSLAKVPFAAHGYGGIFSMGVIDAAYRADMTVEEAHSLIRA 163
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ EIR R + P F ++D +G R+
Sbjct: 164 CVKEIRKRFLGNMPVFKCVVIDTNGIRD 191
>gi|254566233|ref|XP_002490227.1| Beta 4 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|238030023|emb|CAY67946.1| Beta 4 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|328350622|emb|CCA37022.1| 20S proteasome subunit beta 4 [Komagataella pastoris CBS 7435]
Length = 196
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L+A +GE GD VQF E+IQ N+ LY R G L+ A ++F R LA +LR + P
Sbjct: 38 LSDHNLMAFTGESGDTVQFAEYIQANIQLYNMREGHELSPYAVSHFVRNTLAKSLRSRKP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN LLAGYD + PSL +IDY+ T + AA GY ++++LS++D H+ M+VE+
Sbjct: 98 YQVNALLAGYDTDKKTPSLSWIDYLGTKADLPYAAHGYAAFYTLSLLDHHYRKDMTVEDG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ L+ C E+ +R+ + +K+V+KDG +
Sbjct: 158 LRLLKLCNKELNTRMPIDFKGLQVKVVNKDGVK 190
>gi|194770481|ref|XP_001967321.1| GF13881 [Drosophila ananassae]
gi|190618083|gb|EDV33607.1| GF13881 [Drosophila ananassae]
Length = 210
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L ++A G+ GD +QFT++I KN+ LY+ +G L+ AAA+FTR LA +R +
Sbjct: 40 LSDFNMMATVGDGGDTIQFTDYISKNLHLYKIAHGYHLSAKAAAHFTRKNLADYIRTNTR 99
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y V +LLAGYD GP L+YID + ++ A G+GS F S++ R +HS ++ EA
Sbjct: 100 YHVAMLLAGYDAAEGPDLHYIDSLGAAQSINHAGHGWGSMFCGSILQRFWHSKLTQAEAY 159
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++ KC++EI+ RL++ NF + +VDK G R+
Sbjct: 160 SILRKCVVEIQKRLIINQRNFDVYVVDKKGMRK 192
>gi|331221229|ref|XP_003323289.1| proteasome subunit beta type-2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 378
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 99/148 (66%), Gaps = 2/148 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
V+ H ++A SGEPGD VQF E++++N+ LY RN + L AA++TR +LA++LR ++
Sbjct: 43 VVSKHVVMAYSGEPGDTVQFAEYVERNLRLYGIRNHVDLLPHEAASWTRNQLASSLRSRN 102
Query: 61 PYMVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
Y VN+LL G+D E P LY+IDY+ T+ +V AA GYG+YF LS MDR M +++
Sbjct: 103 AYSVNLLLGGFDTAEAVPLLYWIDYLGTMAQVPYAAHGYGAYFCLSTMDRFHRPDMDLQQ 162
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIV 147
++L+ +CI E+ +R +V F K++
Sbjct: 163 GLELLKRCIDELSTRFIVNLGTFKRKLL 190
>gi|388582725|gb|EIM23029.1| N-terminal nucleophile aminohydrolase [Wallemia sebi CBS 633.66]
Length = 194
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 98/154 (63%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H ++A +GE GD +QF E++++N+ L+ R+ I L A+A++ R +LA +LR + P
Sbjct: 38 LGEHLVMAYNGEAGDTIQFAEYVERNLRLHSLRHDIELQPKASASWIRRQLADSLRSRKP 97
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LL G+D G P LY+IDY+ TL V A GY ++F+ S DR+ MS+EE
Sbjct: 98 YAVNLLLGGWDVPKGTPELYWIDYLGTLAHVPYACHGYAAFFATSTFDRYHRPDMSLEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++L+ + E+ RL+V P + +I+ +DG RE
Sbjct: 158 LELMKRATNEVEKRLIVNPGGWKARIITQDGVRE 191
>gi|367000023|ref|XP_003684747.1| hypothetical protein TPHA_0C01570 [Tetrapisispora phaffii CBS 4417]
gi|357523044|emb|CCE62313.1| hypothetical protein TPHA_0C01570 [Tetrapisispora phaffii CBS 4417]
Length = 195
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L +H L+ +GE GD VQF E+IQ N+ L+ R L+ A ++F R ELA +LR + P
Sbjct: 38 LSTHTLMTFTGEAGDTVQFAEYIQANIQLHDIRENYELSPNAVSSFVRQELAKSLRTRKP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ VN+L+ GYD K P LY IDY+ T + AA GY +++ S++D H+ S M+ E+
Sbjct: 98 FQVNVLIGGYDIKTESPELYQIDYLGTKVSLPYAAHGYSGFYTFSLLDHHYRSDMTTEDG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ L+ CI E+ R+ V ++KIVDK+G R
Sbjct: 158 LKLLKLCIEELERRMPVDFKGVIVKIVDKEGIR 190
>gi|366993743|ref|XP_003676636.1| hypothetical protein NCAS_0E02070 [Naumovozyma castellii CBS 4309]
gi|342302503|emb|CCC70277.1| hypothetical protein NCAS_0E02070 [Naumovozyma castellii CBS 4309]
Length = 195
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L++ +GE GD VQF E+IQ N+ LY R L+ A ++F R ELA ++R + P
Sbjct: 38 LSPHTLMSFTGESGDTVQFAEYIQANIQLYAIREDYELSPKAVSSFVRQELAKSIRSRKP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ G+D K P+LY IDY+ T ++ AA GY +++ S++D H+ M+ EE
Sbjct: 98 YQVNVLIGGFDSKLNKPNLYQIDYLGTKVELPYAAHGYSGFYTFSLLDHHYRPDMTTEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ CI E+ R+ V +KIVDKDG R+
Sbjct: 158 LKLLKLCIEELERRMPVDFKGVYVKIVDKDGIRQ 191
>gi|45550918|ref|NP_722823.2| proteasome beta4R2 subunit, isoform A [Drosophila melanogaster]
gi|442625512|ref|NP_001259950.1| proteasome beta4R2 subunit, isoform B [Drosophila melanogaster]
gi|33302636|sp|Q9VQE5.3|PSB2_DROME RecName: Full=Probable proteasome subunit beta type-2
gi|21428846|gb|AAM50142.1| GH07971p [Drosophila melanogaster]
gi|45444964|gb|AAF51229.3| proteasome beta4R2 subunit, isoform A [Drosophila melanogaster]
gi|220944152|gb|ACL84619.1| CG17302-PA [synthetic construct]
gi|220953956|gb|ACL89521.1| CG17302-PA [synthetic construct]
gi|440213217|gb|AGB92487.1| proteasome beta4R2 subunit, isoform B [Drosophila melanogaster]
Length = 210
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L ++A G+ GD +QFT+FI KN+ LY+ +G L+ +AA+FTR LA +R +
Sbjct: 40 LSDFNMMATVGDGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTR 99
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y V +LLAGYD GP L+YID ++ A G+GS F S++ R+++S +S E+A
Sbjct: 100 YQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAY 159
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L+ KC+LEI+ RL++ NF + +VD G R+
Sbjct: 160 SLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRK 192
>gi|195342043|ref|XP_002037611.1| GM18354 [Drosophila sechellia]
gi|195576099|ref|XP_002077914.1| GD23168 [Drosophila simulans]
gi|194132461|gb|EDW54029.1| GM18354 [Drosophila sechellia]
gi|194189923|gb|EDX03499.1| GD23168 [Drosophila simulans]
Length = 210
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L ++A G+ GD +QFT+FI KN+ LY+ +G L+ +AA+FTR LA +R +
Sbjct: 40 LSDFNIMATVGDGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTR 99
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y V +LLAGYD GP L+YID ++ A G+GS F S++ R+++S +S E+A
Sbjct: 100 YQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAY 159
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L+ KC+LEI+ RL++ NF + +VD G R+
Sbjct: 160 SLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRK 192
>gi|353234793|emb|CCA66814.1| probable multicatalytic endopeptidase complex chain PRE1
[Piriformospora indica DSM 11827]
Length = 178
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 96/154 (62%), Gaps = 22/154 (14%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L SH L+A SGEPGD VQF E++++N+ L Q RN PL AAA++ R +A +LR +SP
Sbjct: 38 LGSHLLMAYSGEPGDTVQFAEYVERNLRLQQMRNNHPLRPQAAASWVRRSIADSLRSRSP 97
Query: 62 YMVNILLAGYDKETGPS-LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VNILL GYD + LY++DY+ T V AA GYGSYF+LS++DR
Sbjct: 98 YAVNILLGGYDMANKQAKLYWMDYLGTQVDVPFAAHGYGSYFALSLLDR----------- 146
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
E++ RLV++ P+F +K+VD+ G RE
Sbjct: 147 ---------EVQKRLVISFPSFKVKVVDEGGVRE 171
>gi|323305210|gb|EGA58957.1| Pre1p [Saccharomyces cerevisiae FostersB]
Length = 155
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNIL 67
++ +GE GD VQF E+IQ N+ LY R L+ A ++F R ELA ++R + PY VN+L
Sbjct: 1 MSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVL 60
Query: 68 LAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
+ GYDK+ P LY IDY+ T ++ A GY +++ S++D H+ M+ EE +DL+
Sbjct: 61 IGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKL 120
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
C+ E+ R+ + ++KIVDKDG R+
Sbjct: 121 CVQELEKRMPMDFKGVIVKIVDKDGIRQ 148
>gi|156836888|ref|XP_001642484.1| hypothetical protein Kpol_322p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156113019|gb|EDO14626.1| hypothetical protein Kpol_322p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 195
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 96/154 (62%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H L++ +GE GD VQF E+IQ N+ LY R LT A ++F R ELA +LR + P
Sbjct: 38 LSKHILMSFTGEAGDTVQFAEYIQANIQLYSIRENYELTPHAVSSFVRKELAKSLRSRKP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+ GYD K P LY IDY+ T ++ AA GY +++ S++D H+ MS+EE
Sbjct: 98 YQVNVLIGGYDTKNAKPELYQIDYLGTKVELPYAAHGYSGFYTFSLLDHHYRPDMSLEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ CI E+ R+ V ++K+VDKDG RE
Sbjct: 158 LKLLKLCIAELDKRMPVDFKGVIVKVVDKDGIRE 191
>gi|195437296|ref|XP_002066576.1| GK24489 [Drosophila willistoni]
gi|194162661|gb|EDW77562.1| GK24489 [Drosophila willistoni]
Length = 210
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L ++A G+ GD +QF+++I KN+ LY+ NG L+ AAA+FTR LA LR +
Sbjct: 40 LSDFSMMATVGDGGDTIQFSDYISKNLHLYKISNGYHLSPKAAAHFTRKNLADYLRTNTR 99
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y V +LLAGYD+ GP L+YID ++ A G+GS F S++ R++H ++ +EA
Sbjct: 100 YQVAMLLAGYDESEGPDLHYIDSYGASQSINHAGHGWGSIFCGSILQRYWHQQLTQQEAY 159
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+++ K ++EI+ RL++ NF + +VDK G R+
Sbjct: 160 EILKKSVIEIQKRLIINLRNFDVYVVDKSGMRQ 192
>gi|385304709|gb|EIF48717.1| proteasome component c11 [Dekkera bruxellensis AWRI1499]
Length = 185
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
+L+ H ++A +G GD QF ++IQ N+ LY R G+ L + A++ R ELAT+LR +S
Sbjct: 28 ILNEHNILAYTGTSGDTTQFADYIQGNMQLYSMREGVDLNSKGIASYIRHELATSLRSRS 87
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY VNILLAG DK P L IDY+ T + AA GY +++ +S+ DRH+ M++++
Sbjct: 88 PYQVNILLAGLDKGDAPFLSNIDYMGTRVDLPYAAHGYAAFYVMSLFDRHYRPDMTLKDG 147
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ L+ C E+ R V F +K+VDK+G
Sbjct: 148 MKLLKMCKAELDERFPVVFKGFQVKVVDKEG 178
>gi|342184148|emb|CCC93629.1| 20S proteasome subunit [Trypanosoma congolense IL3000]
Length = 206
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 98/160 (61%), Gaps = 11/160 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRK-- 59
LDSHK++A GE G RV F E+++ N++L + R +G ++T A A+F R LA ALR
Sbjct: 39 LDSHKVVACVGENGPRVHFVEYVKCNMALKKMRAHGRLISTHATASFMRNTLAGALRSRG 98
Query: 60 SPYMVNILLAGYD--------KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
Y VN LL GYD + TG LYY+DY+ T +V GYG+ F ++M+DR +
Sbjct: 99 GAYAVNCLLGGYDVPASADDDEATGAHLYYLDYLGTSQEVPYGCHGYGASFVIAMLDRLW 158
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
S ++ +E ++L+ KC E+R R+V++ F+ K V K+G
Sbjct: 159 RSNLTAQEGIELMQKCCDEVRKRVVISNDKFICKAVTKNG 198
>gi|46124851|ref|XP_386979.1| hypothetical protein FG06803.1 [Gibberella zeae PH-1]
Length = 235
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 101/178 (56%), Gaps = 29/178 (16%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ H L+A SGE GD VQF E+IQ+N LY RN L+ +A A+F RGELAT+LR + P
Sbjct: 43 LNKHTLLAFSGEAGDTVQFAEYIQRNAQLYSMRNESDLSPSALAHFVRGELATSLRSRKP 102
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGS-------------------- 100
Y VN+L+ G D TG PSLY++DY+A+L +V AA GY
Sbjct: 103 YNVNLLMGGVDPITGKPSLYWLDYLASLAEVPYAAHGYAQYVFPEIRLERHNMNQWVWTG 162
Query: 101 -------YFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
Y+ LS++D+H H +++ + + ++ CI E++ RL + V+K V DG
Sbjct: 163 ADLCFYRYYCLSILDKHHHPDITLHQGIKILTMCIDELKRRLPLDFKGMVVKAVKADG 220
>gi|296420572|ref|XP_002839843.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636049|emb|CAZ84034.1| unnamed protein product [Tuber melanosporum]
Length = 175
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNG--IPLTTAAAANFTRGELATALR-K 59
L+ H L+A SGE GD VQF E+IQ NV LY RN L+ +A A+F R +LA +LR +
Sbjct: 17 LNPHTLMAFSGEAGDTVQFAEYIQANVQLYGMRNNSKWQLSPSAVASFVRRQLAKSLRSR 76
Query: 60 SPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
+PY VN+L+ G+D TG P LY++DY+A+ V AA GY Y+ LS++D+H H +++E
Sbjct: 77 NPYYVNLLIGGFDCTTGKPHLYWLDYLASSAAVPYAAHGYAQYYCLSILDKHHHPDITLE 136
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
E + L+ C E+ RL + +K V ++G
Sbjct: 137 EGIKLMRMCHDELIKRLPIDFKGLTVKAVTENG 169
>gi|195470823|ref|XP_002087706.1| GE18168 [Drosophila yakuba]
gi|194173807|gb|EDW87418.1| GE18168 [Drosophila yakuba]
Length = 210
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L ++A G+ GD +QFT+FI KN+ LY+ +G L+ +AA+FTR LA +R +
Sbjct: 40 LSDFNIMATVGDGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTR 99
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y V +LLAGYD GP L+YID ++ A G+GS F S++ R+++S +S +A
Sbjct: 100 YQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSRLSQADAY 159
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L+ KC+LEI+ RL++ NF + +VD G R+
Sbjct: 160 SLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRK 192
>gi|294901497|ref|XP_002777385.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
gi|239885012|gb|EER09201.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
Length = 228
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Query: 11 ASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAG 70
A+G D QF EFI +NV LY NG+ LTT A A+FTR ELA ALRK PY VN+L+ G
Sbjct: 71 AAGPQADSNQFLEFISRNVELYALVNGVQLTTHALASFTRNELADALRKGPYQVNMLIGG 130
Query: 71 YDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
YD + G SLYY+DY+A+ K+ + A GY +YF L ++D+ + M+ E+ +D + +CI
Sbjct: 131 YDDKDGSASLYYMDYLASCQKITRGAHGYAAYFVLGLLDKLYKKDMTQEDGLDAIKQCI 189
>gi|50546575|ref|XP_500757.1| YALI0B11374p [Yarrowia lipolytica]
gi|49646623|emb|CAG83004.1| YALI0B11374p [Yarrowia lipolytica CLIB122]
Length = 219
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 107/156 (68%), Gaps = 2/156 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L+ + L+A +GE GD VQF E+I N LY R+ I L+ +A A+FTR +LA ALR + P
Sbjct: 38 LNPNTLMAYTGEAGDTVQFAEYIMANTRLYGIRHDIELSPSAVASFTRNQLAKALRSRKP 97
Query: 62 YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+L+AG+D +T P+L IDY+A+ ++ AA GY +Y+++S++DRH+ GM+ EE
Sbjct: 98 YQVNVLIAGFDPKTEKPTLNLIDYLASNVELPYAAHGYAAYYTMSLLDRHWKEGMTQEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYA 156
V L+ CI E+++RL V +K+VDKDG R+ +
Sbjct: 158 VVLMRMCIKELQTRLPVDFKGVYVKVVDKDGIRDVS 193
>gi|68064745|ref|XP_674356.1| 20S proteasome beta 4 subunit [Plasmodium berghei strain ANKA]
gi|56492872|emb|CAH94481.1| 20S proteasome beta 4 subunit, putative [Plasmodium berghei]
Length = 214
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 97/167 (58%), Gaps = 19/167 (11%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ +K + G GDR+QF EFI+KNV LYQ++N L + A FTR LA LR++PY
Sbjct: 39 INGNKCLLLGGSIGDRIQFGEFIRKNVHLYQYQNSTSLYVKSFAYFTRKNLAYYLRRNPY 98
Query: 63 MVNILLAGYDK-------------------ETGPSLYYIDYIATLHKVDKAAFGYGSYFS 103
VN L+AGYD + G LY+ DY++ + ++K A GYG+Y
Sbjct: 99 EVNCLIAGYDDVRYKTLKKINNYNFFYYCLKDGYQLYWCDYLSNMDAINKGAHGYGAYLV 158
Query: 104 LSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKD 150
+++D+++H M++EEA+ + KC E++ R ++ N+ ++I+ +
Sbjct: 159 NAILDKYYHENMNLEEALVIFKKCFEELKKRFLLTQINYELRIMSNN 205
>gi|145513030|ref|XP_001442426.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409779|emb|CAK75029.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRK- 59
+ LD HK+ SGE DR F E + KN L +++ G + A+F R A A+R
Sbjct: 36 LKLDDHKIFGISGEGADRNSFGEIVHKNHCLIRYKTGGYMNLQETAHFVRSMYAQAIRSR 95
Query: 60 -SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
P+ N LL G D + PSLY++DY+ +L K+ + A GY +YF L ++D + ++ E
Sbjct: 96 DGPHQCNGLLGGVDSDGTPSLYWLDYLGSLQKITRGAQGYANYFLLGLLDNQYKPNLTKE 155
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYA 156
E ++++ KCI E+++R ++A F++KIV K G +
Sbjct: 156 EGIEIIKKCIKELQTRFLIAQNKFIVKIVTKQGIEAFT 193
>gi|71747326|ref|XP_822718.1| proteasome subunit beta 2 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832386|gb|EAN77890.1| proteasome beta 2 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332493|emb|CBH15488.1| 20S proteasome subunit [Trypanosoma brucei gambiense DAL972]
Length = 206
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 11/160 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRKSP 61
LDSHK++A +GE G R F E+++ N++L + R +G ++T A A+F R LA ALR
Sbjct: 39 LDSHKVVACAGENGPRTHFVEYVKCNMALKKMREHGRMISTHATASFMRNTLAGALRSRD 98
Query: 62 --YMVNILLAGYDK--------ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
Y VN LLAG+D TG LYY+DY+ TL +V GYG+ F +M+DR +
Sbjct: 99 GLYPVNCLLAGFDVPASAEDDVATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMW 158
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++ +E V+L+ KC E++ R+VV+ F+ K V KDG
Sbjct: 159 RPNLTAQEGVELMQKCCDEVKKRVVVSNNTFICKAVTKDG 198
>gi|400601001|gb|EJP68669.1| proteasome A-type and B-type [Beauveria bassiana ARSEF 2860]
Length = 226
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 98/163 (60%), Gaps = 14/163 (8%)
Query: 3 LDSHKLIAASGEPGDR------------VQFTEFIQKNVSLYQFRNGIPLTTAAAANFTR 50
L+ + L+A SGE GD +QF E+IQ+N LY RN L+ + A+F R
Sbjct: 49 LNKNTLLAFSGEAGDTGKSSASNLSWRILQFAEYIQRNAQLYSMRNETDLSPSGLAHFVR 108
Query: 51 GELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMD 108
GELA++LR + PY VN+L+ G D TG PSLY++DY+A + +V AA GY Y+ LS++D
Sbjct: 109 GELASSLRSRKPYNVNLLMGGVDPITGKPSLYWMDYLAAMAEVPYAAHGYAQYYCLSILD 168
Query: 109 RHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+H H +++ + + L+ C E++ RL + V+K V DG
Sbjct: 169 KHHHPDITLGQGIKLLTLCTDELKRRLPIDFKGMVVKAVKADG 211
>gi|330040497|ref|XP_003239935.1| 26S proteasome chain protein [Cryptomonas paramecium]
gi|327206861|gb|AEA39037.1| 26S proteasome chain protein [Cryptomonas paramecium]
Length = 193
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 88/148 (59%)
Query: 7 KLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNI 66
KL+ +G PGD FT+FI K + Y +N L+T + ANF R E++ R SP+ +++
Sbjct: 42 KLLVVNGYPGDIGYFTDFIHKAILFYTLKNRAYLSTHSIANFIRKEISDCFRNSPFKISM 101
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LL G+D GPSLY+IDY + + + GY S+F S +D+ F M +EEA+ +V
Sbjct: 102 LLIGFDVGMGPSLYFIDYTGVIQRTNFYVQGYASFFLFSFLDKKFKYNMKIEEALLIVIW 161
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
CI ++ R V NF++K +D +G++
Sbjct: 162 CITILKKRFVFNQVNFMVKTIDLNGSKN 189
>gi|58265266|ref|XP_569789.1| proteasome subunit beta type 2 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134109223|ref|XP_776726.1| hypothetical protein CNBC2170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819238|sp|P0CQ13.1|PSB4_CRYNB RecName: Full=Probable proteasome subunit beta type-4
gi|338819239|sp|P0CQ12.1|PSB4_CRYNJ RecName: Full=Probable proteasome subunit beta type-4
gi|845293|gb|AAB06582.1| putative proteasome subunit [Cryptococcus neoformans]
gi|50259406|gb|EAL22079.1| hypothetical protein CNBC2170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226021|gb|AAW42482.1| proteasome subunit beta type 2, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 224
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
L H +A SGEPGD F E+I++N+ LY RN PL AA+ + R LA A+R +
Sbjct: 37 TLGPHLAMAFSGEPGDTNNFAEYIERNMRLYNIRNHFPLLPPAASAWVRRTLAEAIRSRH 96
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL G+D T P LY+IDY+ T V AA G G Y SLS MD+ ++ M +E
Sbjct: 97 PYAVNLLLGGFDTTTSKPHLYWIDYLGTKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
VDL+ KCI E RL + +F ++DK+G
Sbjct: 157 GVDLLRKCIDETEKRLTIK-FDFNCILIDKNG 187
>gi|17380219|sp|Q9NHC6.1|PSB2_TRYBB RecName: Full=Proteasome subunit beta type-2; AltName: Full=20S
proteasome subunit beta-4
gi|7141310|gb|AAF37284.1|AF226673_1 20S proteasome beta 4 subunit [Trypanosoma brucei]
Length = 206
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 96/160 (60%), Gaps = 11/160 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRKSP 61
LDSHK++A +GE G R F E+++ N++L + R +G ++T A A+F R LA ALR
Sbjct: 39 LDSHKVVACAGENGPRTHFVEYVKCNMALKKMREHGRMISTHATASFMRNTLAGALRSRD 98
Query: 62 --YMVNILLAGYDK--------ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
Y VN LLAG+D TG LYY+DY+ TL +V GYG+ F +M+DR +
Sbjct: 99 GLYPVNCLLAGFDVPASAEDDVATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMW 158
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++ +E V+L+ KC E+ R+VV+ F+ K V KDG
Sbjct: 159 RPNLTAQEGVELMQKCCDEVNKRVVVSNNTFICKAVPKDG 198
>gi|340057082|emb|CCC51424.1| putative proteasome beta 2 subunit, fragment [Trypanosoma vivax
Y486]
Length = 206
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 97/160 (60%), Gaps = 11/160 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRK-- 59
LDSHK++A +GE G RV F ++I+ N++L + R +G ++T A A+F R L+ ALR
Sbjct: 39 LDSHKVVACAGENGPRVNFVDYIKCNLALKRMREHGRSISTQATAHFMRNTLSGALRSRG 98
Query: 60 SPYMVNILLAGYDKET--------GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
Y+VN LLAGYD ET G LYY+DY+ T+ +V GYG+ F +M+DR +
Sbjct: 99 GAYLVNCLLAGYDAETSADDDSVKGTHLYYLDYLGTMQEVPYGCHGYGAAFVTAMLDRLW 158
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++ +E +L+ C E++ R+V++ F+ K V +G
Sbjct: 159 RPNLTSQEGAELMQMCCDEVKKRVVISNDKFICKAVTSNG 198
>gi|405119032|gb|AFR93805.1| proteasome subunit beta type 2 [Cryptococcus neoformans var. grubii
H99]
Length = 224
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
L H +A SGEPGD F E+I++N+ LY RN PL AA+ + R LA A+R +
Sbjct: 37 TLGPHLAMAFSGEPGDTNNFAEYIERNMRLYNIRNHFPLLPPAASAWVRRTLAEAIRSRH 96
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL G+D T P LY+IDY+ T V AA G G Y SLS MD+ ++ M E
Sbjct: 97 PYAVNLLLGGFDTTTSKPHLYWIDYLGTKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKRE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
VDL+ KCI E RL + +F ++DK+G
Sbjct: 157 GVDLLRKCIDETEKRLTIK-FDFNCILIDKNG 187
>gi|194854891|ref|XP_001968442.1| GG24870 [Drosophila erecta]
gi|190660309|gb|EDV57501.1| GG24870 [Drosophila erecta]
Length = 210
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L ++A G+ GD +QFT++I KN+ LY+ +G L+ +AA+FTR LA +R +
Sbjct: 40 LSDFNMMATVGDGGDTIQFTDYISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTR 99
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y V +LLAGYD GP L+YID ++ A G+GS F S++ R+++S ++ +A
Sbjct: 100 YQVAMLLAGYDGVEGPDLHYIDSYGAAQPINHAGHGWGSMFCGSILQRYWNSRLTQADAY 159
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L+ KC+LEI+ RL++ NF + +VD G R+
Sbjct: 160 SLMKKCVLEIQRRLIINQRNFDVYVVDSKGMRK 192
>gi|389585144|dbj|GAB67875.1| 20S proteasome beta 4 subunit [Plasmodium cynomolgi strain B]
Length = 215
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 95/165 (57%), Gaps = 20/165 (12%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ +K + G GDR+QF EFI+KNV LYQ++N + + A FTR LA LR++PY
Sbjct: 39 INGNKCLLLGGSIGDRIQFGEFIRKNVHLYQYQNSTDMFVKSFAFFTRKNLAYYLRRNPY 98
Query: 63 MVNILLAGYDK--------------------ETGPSLYYIDYIATLHKVDKAAFGYGSYF 102
VN L+AGYD + G LY+ DY++ + V+K A GYG+Y
Sbjct: 99 EVNCLIAGYDNVGKEASLRLRGVGVEKVTVYKDGYQLYWCDYLSNMDAVNKGAHGYGAYL 158
Query: 103 SLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
++D+++H M++EEA+ + KC E++ R ++ N+ ++I+
Sbjct: 159 VNGILDKYYHENMNLEEALLIFKKCFEELKKRFLLTQINYELRIM 203
>gi|145534101|ref|XP_001452795.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420494|emb|CAK85398.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRK--S 60
LD HK+ SGE DR F E + KN L +++ G + A+F R A A+R
Sbjct: 38 LDDHKIFGISGEGADRNSFGEIVHKNHCLIRYKTGGYMNLQETAHFVRSMYAQAIRSRDG 97
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
P+ N LL G D + PSLY++DY+ +L K+ + A GY +YF L ++D + + EE
Sbjct: 98 PHQCNGLLGGVDSDGTPSLYWLDYLGSLQKITRGAQGYANYFLLGLLDNQYKPNLIKEEG 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++++ KCI E+++R ++A F++KIV K G
Sbjct: 158 IEIIKKCIKELQTRFLIAQNKFIVKIVTKQG 188
>gi|195161388|ref|XP_002021550.1| GL26572 [Drosophila persimilis]
gi|198472575|ref|XP_002133075.1| GA28985 [Drosophila pseudoobscura pseudoobscura]
gi|194103350|gb|EDW25393.1| GL26572 [Drosophila persimilis]
gi|198139073|gb|EDY70477.1| GA28985 [Drosophila pseudoobscura pseudoobscura]
Length = 210
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 92/153 (60%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L +IA G+ GD +QFT+FI KN+ LY+ NG L+ A A+FTR LA +R +
Sbjct: 40 LSDFSMIATVGDGGDTLQFTDFISKNLHLYKIANGYHLSPRATAHFTRKNLADYIRTNTR 99
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y V +LLAGYD GP L+YID ++ A G+GS F S++ R + +S ++AV
Sbjct: 100 YQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSIFCGSILQRFWDQKLSQDQAV 159
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++ KC+ EI+ RL++ N+ + +VD G R+
Sbjct: 160 SILKKCVAEIQKRLIINQRNWDVFVVDGSGMRQ 192
>gi|403216121|emb|CCK70619.1| hypothetical protein KNAG_0E03620 [Kazachstania naganishii CBS
8797]
Length = 200
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
+++ SGE GD VQF E++Q NV LY R G L+ +A A+F R ELA +LR + PY VN+
Sbjct: 43 VMSYSGEAGDTVQFAEYVQANVQLYAMREGADLSPSAIAHFVRLELAKSLRSRKPYQVNV 102
Query: 67 LLAGYDKE------TGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
LL G + + P LY IDY+ TL ++ AA GY ++++ S++DRH+ GM+ EE
Sbjct: 103 LLGGASAQGSGTTASTPHLYQIDYLGTLVELPYAAHGYAAFYTFSLLDRHYREGMTREEG 162
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+L+ C+ E++ R+ + +K V DG
Sbjct: 163 WELLQLCVDELKRRIPMDFKGITVKTVSADG 193
>gi|154345458|ref|XP_001568666.1| putative proteasome beta 2 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066008|emb|CAM43792.1| putative proteasome beta 2 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 206
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 97/160 (60%), Gaps = 11/160 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR--K 59
LD+H+L+A GE G RV FTE+I+ N++L + R +G + + ANF R LA+ALR +
Sbjct: 39 LDTHQLVACIGENGPRVNFTEYIKCNLALNRMRQHGRHSSCESTANFMRNSLASALRSRE 98
Query: 60 SPYMVNILLAGYD--------KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
Y VN L AGYD GP L+Y+DY+ TL V GYG+ F S++DR +
Sbjct: 99 GAYQVNCLFAGYDVPVSEDDDGAAGPQLFYMDYLGTLQAVPFGCHGYGASFVTSLLDRLW 158
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++ +E ++L+ KC E++ R+V++ +F +K V K+G
Sbjct: 159 RPDLTEQEGLELMQKCCDEVKRRVVISNAHFFVKAVTKNG 198
>gi|321254353|ref|XP_003193046.1| proteasome subunit beta type 2 [Cryptococcus gattii WM276]
gi|317459515|gb|ADV21259.1| proteasome subunit beta type 2, putative [Cryptococcus gattii
WM276]
Length = 224
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
L H +A SGEPGD F E+I++N+ LY RN PL AA+ + R LA A+R +
Sbjct: 37 TLGPHLAMAFSGEPGDTNNFAEYIERNMRLYNIRNHFPLLPPAASAWVRRTLAEAIRSRH 96
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+LL G+D T P LY+IDY+ T V AA G G Y SLS MD+ ++ M E
Sbjct: 97 PYAVNLLLGGFDTTTSKPHLYWIDYLGTKAVVPYAAHGMGVYVSLSTMDKWWYEDMDKRE 156
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
VDL+ +CI E RL + +F ++DK+G
Sbjct: 157 GVDLLRRCIDETEKRLTIK-FDFNCILIDKNG 187
>gi|256084821|ref|XP_002578624.1| proteasome subunit beta 2 (T01 family) [Schistosoma mansoni]
gi|360045144|emb|CCD82692.1| proteasome subunit beta 2 (T01 family) [Schistosoma mansoni]
Length = 142
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 84/120 (70%), Gaps = 1/120 (0%)
Query: 36 NGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKA 94
G LT +AAANFTR +A +LR +SPY VN+L+AG+D +TGP LYY+DY+A+L KV A
Sbjct: 12 QGYELTPSAAANFTRNNMAESLRSRSPYFVNLLIAGFDLQTGPELYYLDYLASLIKVPFA 71
Query: 95 AFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
GYG+ +LS++DR M+V EAV L+ CI E++ RLV+ ++++IV KDG E
Sbjct: 72 VHGYGALVALSILDRMHRPDMTVNEAVALLRLCIQEVQKRLVINLDRYMVRIVTKDGIEE 131
>gi|239791172|dbj|BAH72089.1| ACYPI004276 [Acyrthosiphon pisum]
gi|239792790|dbj|BAH72694.1| ACYPI004276 [Acyrthosiphon pisum]
Length = 210
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
+ ++ ++ +GE GD +F E+I +NV LY+ RNG L+ A A FTR +A LR +SP
Sbjct: 38 ITNNVVMGVTGEAGDVPRFAEYITQNVKLYRMRNGYDLSIPAIATFTRKTVAEHLRSQSP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN +L GY+ E LY+IDY+ V A GYG ++++MDR++ + +EA
Sbjct: 98 YQVNFMLGGYNPTEKKSHLYFIDYLGAQVDVPYGAHGYGGMMTITVMDRYYKPDANYQEA 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
DL+ KCILE++ R ++ P F +KI G +E
Sbjct: 158 YDLLKKCILEVQKRCIINMPKFKVKICCAGGVQE 191
>gi|244790059|ref|NP_001156440.1| proteasome beta 2 subunit [Acyrthosiphon pisum]
gi|239789655|dbj|BAH71438.1| ACYPI004276 [Acyrthosiphon pisum]
Length = 210
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
+ ++ ++ +GE GD +F E+I +NV LY+ RNG L+ A A FTR +A LR +SP
Sbjct: 38 ITNNVVMGVTGEAGDVPRFAEYITQNVKLYRMRNGYDLSIPAIATFTRKTVAEHLRSQSP 97
Query: 62 YMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN +L GY+ E LY+IDY+ V A GYG ++++MDR++ + +EA
Sbjct: 98 YQVNFMLGGYNPAEKKSHLYFIDYLGAQVDVPYGAHGYGGMMTITVMDRYYKPDANYQEA 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
DL+ KCILE++ R ++ P F +KI G +E
Sbjct: 158 YDLLKKCILEVQKRCIINMPKFKVKICCAGGVQE 191
>gi|342878478|gb|EGU79815.1| hypothetical protein FOXB_09674 [Fusarium oxysporum Fo5176]
Length = 250
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Query: 19 VQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG- 76
VQF E+IQ+N LY RN L+ + A+F RGELAT+LR + PY VN+L+ G D TG
Sbjct: 10 VQFAEYIQRNAQLYSMRNESDLSPSGLAHFVRGELATSLRSRKPYNVNLLMGGVDPITGK 69
Query: 77 PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLV 136
PSLY++DY+A+L V AA GY Y+ LS++D+H H +++ + + ++ C E++ RL
Sbjct: 70 PSLYWLDYLASLADVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKILTMCTDELKRRLP 129
Query: 137 VAPPNFVIKIVDKDG 151
+ V+K V DG
Sbjct: 130 IDFKGMVVKAVKADG 144
>gi|313225071|emb|CBY20864.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 93/150 (62%), Gaps = 4/150 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNIL 67
+A GE GD F E I KN++LY+ RNG +T AA FTR +LAT+LR + Y VN+L
Sbjct: 45 MAVCGEVGDTNFFQESIAKNIALYEMRNGYDMTPNEAACFTRHKLATSLRSRKSYQVNLL 104
Query: 68 LAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGM--SVEEAVDLV 124
+AGYD E P L+ IDY+A + A GYG+ F++S++DRH++ + EEA+ L
Sbjct: 105 VAGYDDIEEKPELHLIDYLAADIECPYGAHGYGAMFTMSILDRHYNKDKPPTREEAIALF 164
Query: 125 DKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
KC E++ R + P F +KIV KDG E
Sbjct: 165 QKCCDELQRRFSINLPLFRLKIVSKDGIEE 194
>gi|440300991|gb|ELP93438.1| proteasome subunit beta type-2-A, putative [Entamoeba invadens IP1]
Length = 219
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
L ++L+A GE DR +F+Q+N++L +RNG+ TT++ A++ R E++ LRK Y
Sbjct: 59 LQGNRLMAIVGEANDRQALADFVQRNIALNYYRNGLKSTTSSVAHWVRQEMSENLRKGKY 118
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
++L+ G D+ P LY +D + L + + AA G GS+F L+++D+H+H M +EA+
Sbjct: 119 QCSVLIGGVDE--APELYLVDQLGALVQENYAAHGVGSHFVLALLDKHWHQDMEYQEALQ 176
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKD 150
L++KCI EI+ R++V+ + ++ KD
Sbjct: 177 LLEKCIDEIKRRVLVSSSEYCVEACFKD 204
>gi|344300835|gb|EGW31156.1| hypothetical protein SPAPADRAFT_52324 [Spathaspora passalidarum
NRRL Y-27907]
Length = 196
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 101/154 (65%), Gaps = 3/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KS 60
L++H LIA +GE GD VQF E++Q N+ LY R N I L+ A A+F R +LAT++R +
Sbjct: 38 LNAHNLIAYTGEAGDTVQFAEYVQANIQLYSMRENDIELSPLATASFVRNQLATSIRSRK 97
Query: 61 PYMVNILLAGYD-KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN L+AGYD K+ P+L +IDY+ T ++ A GY +++ S++D+H+ M V++
Sbjct: 98 PYQVNCLIAGYDTKKDQPTLNWIDYLGTQVELPYGAHGYAGFYTTSLLDKHYRKDMVVDD 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ L+ C+ E+ +R+ + +K+VDKDG R
Sbjct: 158 GLKLLKLCLKELETRMPIDFKGVYVKVVDKDGIR 191
>gi|346325319|gb|EGX94916.1| proteasome component C11 [Cordyceps militaris CM01]
Length = 299
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 98/176 (55%), Gaps = 27/176 (15%)
Query: 3 LDSHKLIAASGEPGDR-------------------------VQFTEFIQKNVSLYQFRNG 37
L+ + L+A SGE GD VQF E+IQ+N LY RN
Sbjct: 40 LNKNTLLAFSGEAGDTGELATRIALEPAHIMRMHRRPRRLGVQFAEYIQRNAQLYSMRNE 99
Query: 38 IPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAA 95
L+ + A+F RGELA++LR + PY VN+L+ G D TG PSLY++DY+A + +V AA
Sbjct: 100 TDLSPSGLAHFVRGELASSLRSRKPYNVNLLMGGVDPITGKPSLYWMDYLAAMAEVPYAA 159
Query: 96 FGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
GY Y+ LS++D+H H +++ + + L+ C E++ RL + ++K V DG
Sbjct: 160 HGYAQYYCLSILDKHHHPDITLGQGIKLLTLCTDELKRRLPIDFKGMIVKAVKADG 215
>gi|334329194|ref|XP_003341196.1| PREDICTED: proteasome subunit beta type-2-like [Monodelphis
domestica]
Length = 231
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 32/179 (17%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGEL-------------- 53
L+ GE GD VQF E+IQKNV LY+ RN L + T +
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNAHLLQMGSTVGRTLAKADVFIYRRQNSVLLQ 102
Query: 54 ------------------ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAA 95
+ + +PY VN+LLAGYD+ GP+LYY+DY+A L K AA
Sbjct: 103 MAMPGSKWQSLTPLLPPPSQGILTTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAA 162
Query: 96 FGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
GYG++ +LS++DR++ ++ EEAV+L+ KC+ E++ R ++ P+F ++I+DKDG +
Sbjct: 163 HGYGAFLTLSILDRYYKPSITREEAVELLKKCLEELQKRFILNLPSFSVRIIDKDGIHD 221
>gi|444725425|gb|ELW65990.1| hypothetical protein TREES_T100000558 [Tupaia chinensis]
Length = 551
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 58/123 (47%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Query: 30 SLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATL 88
++ Q ++G L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L
Sbjct: 415 NIVQMKDGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAAL 474
Query: 89 HKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVD 148
K AA GYG++ +LS++DR++ +S E AV+L+ KC+ E++ R ++ P F ++I+D
Sbjct: 475 AKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIID 534
Query: 149 KDG 151
K+G
Sbjct: 535 KNG 537
>gi|392579501|gb|EIW72628.1| hypothetical protein TREMEDRAFT_36819 [Tremella mesenterica DSM
1558]
Length = 229
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 93/145 (64%), Gaps = 3/145 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNIL 67
+A GEPGD +F +++ +N+ LY RN PL +AA++ R LA ++R +SPY VN+L
Sbjct: 44 MACGGEPGDTSRFADYVDRNLRLYHIRNNFPLPPPSAASWVRRILAESIRSRSPYAVNVL 103
Query: 68 LAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L G+D T P LY++DY+ T + AA G G Y +LS MD+ ++ + EA+D+++K
Sbjct: 104 LGGFDTTTSKPHLYWLDYLGTKADIPYAAQGVGMYVTLSTMDKWWYENIERREALDVLNK 163
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C+ E++ R+ + +F ++DKDG
Sbjct: 164 CVDEVKKRVTIK-FDFNCVLIDKDG 187
>gi|448083751|ref|XP_004195434.1| Piso0_004821 [Millerozyma farinosa CBS 7064]
gi|359376856|emb|CCE85239.1| Piso0_004821 [Millerozyma farinosa CBS 7064]
Length = 196
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 101/155 (65%), Gaps = 3/155 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KS 60
L+ H LIA +GE GD V F E+IQ N+ LY R N I L+ A A+F R +LAT++R +
Sbjct: 38 LNPHNLIAYTGEAGDTVNFAEYIQANIQLYSMRENDIELSPKATASFVRNQLATSIRSRK 97
Query: 61 PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY VN+L+ GYD + P+L +IDY+ T ++ AA GY +++ S+ DRH+ GM+VEE
Sbjct: 98 PYQVNVLIGGYDVASNTPTLNWIDYLGTQVELPYAAHGYAAFYCTSLFDRHYKKGMTVEE 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++L+ + E+ R+ + + +K++DKDG R+
Sbjct: 158 GLELLKLSLKELEIRMPLDFKGYYVKVIDKDGIRD 192
>gi|320582204|gb|EFW96422.1| proteasome subunit [Ogataea parapolymorpha DL-1]
Length = 194
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 93/154 (60%), Gaps = 1/154 (0%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
VL+ + L+A +GE GD QF ++IQ N+ L+ R L + A A+F R +LAT++R ++
Sbjct: 37 VLNQYNLLAFTGESGDTTQFADYIQANIQLFTMRENTELNSKAIASFVRQQLATSIRSRT 96
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
PY V +LL G + P L IDY+ T + A GY +++++S++D H+ M+++E
Sbjct: 97 PYQVQVLLGGLHNGSEPFLSLIDYLGTRVDLPYCAHGYAAFYTMSLLDHHYRPDMALDEG 156
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ L+ C E+ R+ + +K++DKDG R+
Sbjct: 157 LKLLKLCHQELVKRMPIEFKGLYVKVIDKDGIRD 190
>gi|426328917|ref|XP_004025493.1| PREDICTED: proteasome subunit beta type-2 isoform 4 [Gorilla
gorilla gorilla]
Length = 160
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Query: 30 SLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATL 88
++ Q ++G L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L
Sbjct: 24 NIVQMKDGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAAL 83
Query: 89 HKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVD 148
K AA GYG++ +LS++DR++ +S E AV+L+ KC+ E++ R ++ P F ++I+D
Sbjct: 84 AKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIID 143
Query: 149 KDG 151
K+G
Sbjct: 144 KNG 146
>gi|301766254|ref|XP_002918555.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-2-like
[Ailuropoda melanoleuca]
Length = 212
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 91/141 (64%), Gaps = 2/141 (1%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGY 71
GE GD VQF E+IQ+N LY+ +N + AAANF + LR ++P VN+LLAG
Sbjct: 46 GEAGDTVQFAEYIQQNEPLYKGQNHYERSPIAAANFPHQHVTDYLRSRTPCHVNLLLAGS 105
Query: 72 DKETGPSLYYIDYIATLHKVDKA-AFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ GP++YY DY+A L K A A GYG++ +LS++DR++ +S E AV+L+ K E
Sbjct: 106 DEHEGPAIYYTDYLAALAKAPFAPAHGYGAFLTLSILDRYYTPTISCERAVELLRKYPEE 165
Query: 131 IRSRLVVAPPNFVIKIVDKDG 151
++ ++ PNF + I++K+G
Sbjct: 166 LKKCFILNLPNFSVXIINKNG 186
>gi|157876510|ref|XP_001686602.1| putative proteasome beta 2 subunit [Leishmania major strain
Friedlin]
gi|68129677|emb|CAJ08983.1| putative proteasome beta 2 subunit [Leishmania major strain
Friedlin]
Length = 206
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 97/160 (60%), Gaps = 11/160 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR--K 59
LD+H+L+A +GE G RV FTE++++N+ L + R +G + + ANF R LA+A+R +
Sbjct: 39 LDTHQLVACTGENGPRVNFTEYVKRNLMLNRMRQHGRHSSCDSTANFMRNCLASAIRSRE 98
Query: 60 SPYMVNILLAGYD--------KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
Y V+ L AGYD GP L+Y+DY+ TL V GYG+ F +++D +
Sbjct: 99 GAYQVSCLFAGYDMPVSEDDNGAVGPQLFYLDYLGTLQAVPYGCHGYGACFVTALLDCLW 158
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++ +E ++L+ KC E++ R+V++ +F +K V K+G
Sbjct: 159 RPDLTQQEGLELMQKCCDEVKRRVVISNSHFFVKAVTKNG 198
>gi|146103498|ref|XP_001469574.1| putative proteasome beta 2 subunit [Leishmania infantum JPCM5]
gi|398023980|ref|XP_003865151.1| proteasome beta 2 subunit, putative [Leishmania donovani]
gi|134073944|emb|CAM72684.1| putative proteasome beta 2 subunit [Leishmania infantum JPCM5]
gi|322503388|emb|CBZ38472.1| proteasome beta 2 subunit, putative [Leishmania donovani]
Length = 206
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 95/160 (59%), Gaps = 11/160 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR--K 59
LD+H+LIA +GE G RV FTE+++ N+ L + R +G + + ANF R LA+A+R +
Sbjct: 39 LDTHQLIACTGENGPRVNFTEYVKCNLMLNRMRQHGRHSSCDSTANFMRNCLASAIRSRE 98
Query: 60 SPYMVNILLAGYD--------KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
Y VN L AGYD GP L+Y+DY+ TL V GYG+ F +++D +
Sbjct: 99 GAYQVNCLFAGYDMPVSEDDDGAVGPQLFYLDYLGTLQAVPYGCHGYGACFVTALLDCLW 158
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++ +E ++L+ KC E++ R+V++ F +K V K+G
Sbjct: 159 RPDLTQQEGLELMQKCCDEVKRRVVISNSYFFVKAVTKNG 198
>gi|195386820|ref|XP_002052102.1| GJ17369 [Drosophila virilis]
gi|194148559|gb|EDW64257.1| GJ17369 [Drosophila virilis]
Length = 193
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 91/153 (59%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L ++AA G+ GD +QFT++I K++ LY+ N LT A+FTR LA +R +
Sbjct: 10 LSEFSMLAAVGDGGDTLQFTDYIAKHLQLYKISNNYHLTPRGTAHFTRKNLADYIRTNTR 69
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y V++L+AGYD GP L+YID ++ A G GS F S+ R++ G+ +A
Sbjct: 70 YQVSMLMAGYDVIEGPDLHYIDSYGAAMPINHAGHGLGSLFCGSIFQRYWTEGLKPTQAY 129
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
D++ C+ EI+ RL++ NF + IVD++G R+
Sbjct: 130 DILKMCVAEIQKRLIINLRNFDVFIVDRNGTRQ 162
>gi|401889292|gb|EJT53227.1| proteasome subunit beta type 2 [Trichosporon asahii var. asahii CBS
2479]
gi|406698996|gb|EKD02217.1| proteasome subunit beta type 2 [Trichosporon asahii var. asahii CBS
8904]
Length = 274
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L H +A GEPGD F +++++NV LY R+ PL AA ++ R LA +LR + P
Sbjct: 82 LGPHLAMAYGGEPGDTNNFADYVERNVRLYNIRHNHPLLPHAAGSWIRRTLADSLRSRRP 141
Query: 62 YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y VN+LLAGYD T P LY+IDY+ T V AA G+G LS MD+++ E
Sbjct: 142 YAVNLLLAGYDTTTDVPHLYWIDYLGTKATVSYAAHGFGQLVCLSTMDKYWTEDADKREG 201
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
V+ + KCI E++ RL V +F ++DK G +
Sbjct: 202 VETIRKCIDEVKIRLTVK-FDFNCIMIDKHGIHQ 234
>gi|209734746|gb|ACI68242.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 170
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 31/148 (20%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKN+ LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
LLAG+D+ GP LYY+D+++ L K AA G+G+Y +LS+++
Sbjct: 103 LLAGFDETDGPGLYYMDHLSALAKAPFAAHGHGAYRTLSILNL----------------- 145
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGARE 154
P+F ++++DKDG +
Sbjct: 146 -------------PSFSVRLIDKDGIHD 160
>gi|401419770|ref|XP_003874374.1| putative proteasome beta 2 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490610|emb|CBZ25871.1| putative proteasome beta 2 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 206
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 95/160 (59%), Gaps = 11/160 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR--K 59
LD+H+L+A +GE G RV FTE+++ N+ L + R +G + + ANF R LA+A+R +
Sbjct: 39 LDTHQLVACTGENGPRVNFTEYVKCNLMLNRMRQHGRHSSCDSTANFMRNCLASAIRSRE 98
Query: 60 SPYMVNILLAGYD--------KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
Y V+ L AGYD GP L+Y+DY+ TL V GYG+ F +++D +
Sbjct: 99 GAYQVSCLFAGYDMPVSEDDDGAVGPQLFYLDYLGTLQAVPYGCHGYGACFVTALLDCLW 158
Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++ +E ++L+ KC E++ R+V++ F +K V K+G
Sbjct: 159 RPDLTQQEGLELMQKCCDEVKRRVVISNAFFFVKAVTKNG 198
>gi|414872237|tpg|DAA50794.1| TPA: hypothetical protein ZEAMMB73_385311 [Zea mays]
Length = 119
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 59/67 (88%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
MVLDS KL+ ASGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAAAANFTRGELATALRK
Sbjct: 36 MVLDSQKLMGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALRKV 95
Query: 61 PYMVNIL 67
+N++
Sbjct: 96 LIRINLV 102
>gi|67470953|ref|XP_651433.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|167382427|ref|XP_001736097.1| proteasome subunit beta type [Entamoeba dispar SAW760]
gi|56468166|gb|EAL46047.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|165901536|gb|EDR27614.1| proteasome subunit beta type, putative [Entamoeba dispar SAW760]
gi|407034757|gb|EKE37377.1| proteasome subunit beta type 2, putative [Entamoeba nuttalli P19]
gi|449703462|gb|EMD43907.1| proteasome subunit beta type, putative [Entamoeba histolytica KU27]
Length = 198
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+ ++L+ GE DR +F+Q+N++L +RNG+ TT + A++ R +++ +LR+ Y
Sbjct: 38 VQGNRLLTIIGEGNDRQVLADFVQRNIALNYYRNGLKSTTQSIAHWIRRQVSDSLREGGY 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
++LL G D++ P L+ ID TL A+ G GS F +++D+++HSGM EEA++
Sbjct: 98 QCSMLLGGVDEK--PELFMIDQFGTLVPETYASHGIGSNFVYALLDKNWHSGMEFEEALE 155
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKD 150
L+ KCI EI+ R++V+ ++ I++ KD
Sbjct: 156 LMKKCIKEIQKRVIVSSSHYCIEVCYKD 183
>gi|195386816|ref|XP_002052100.1| GJ17367 [Drosophila virilis]
gi|194148557|gb|EDW64255.1| GJ17367 [Drosophila virilis]
Length = 231
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 89/153 (58%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
+ S+ ++A G GD + F +FI N+SLY+ RNG + T +FTR + +R K
Sbjct: 38 ISSNSMMAVVGNNGDTLHFADFIATNISLYEIRNGYDMDTPTVVHFTRNHILDNIRNKVS 97
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
V +LLAGYD E GPSL +ID T ++ + G G S+ + ++ +E V
Sbjct: 98 SQVAMLLAGYDSEFGPSLCFIDAQGTTMPLNYSGHGLGHPICTSIFHMMWKPDLTFQEGV 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
D+V +C++EI++RLV+ NF + +VDKDG R+
Sbjct: 158 DIVRRCVVEIQNRLVINLRNFDVFVVDKDGVRK 190
>gi|429857778|gb|ELA32626.1| proteasome component c11 [Colletotrichum gloeosporioides Nara gc5]
Length = 196
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 94/165 (56%), Gaps = 16/165 (9%)
Query: 3 LDSHKLIAASGEPGDR---------VQFTEFIQKNVS-----LYQFRNGIPLTTAAAANF 48
L+ H LIA SGE GD V+ FI LY RN L+ + ANF
Sbjct: 17 LNKHTLIAYSGEAGDTAPPSFPSYPVRAGSFIVTTARWVLTLLYSMRNETDLSPSGLANF 76
Query: 49 TRGELATALR-KSPYMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSM 106
RGELA++LR + PY VN+LL G D T P+LY++DY+A+L V AA GY Y+ LS+
Sbjct: 77 IRGELASSLRSRKPYNVNLLLGGVDPITQKPALYWLDYLASLAPVPYAAHGYAQYYCLSI 136
Query: 107 MDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+D+H H +++ + + +++ C E++ RL + V+K V KDG
Sbjct: 137 LDKHHHPDITLGQGIKILNMCTDELKRRLPIDFKGMVVKAVTKDG 181
>gi|195086146|ref|XP_001997426.1| GH22171 [Drosophila grimshawi]
gi|193906293|gb|EDW05160.1| GH22171 [Drosophila grimshawi]
Length = 222
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 93/153 (60%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L ++AA G+ GD +QFT+++ K++ LY+ NG L+ AA++TR LA +R +
Sbjct: 38 LSEFSMLAAVGDGGDTLQFTDYVAKHLQLYRISNGYHLSPRGAAHYTRKNLADYIRTNTR 97
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y V++L+AGYD G L+YID ++ A G GS F S+ R++ +S EA
Sbjct: 98 YQVSMLMAGYDAIEGSDLHYIDSYGASMSINHAGHGLGSLFCGSIFQRYWREDLSQAEAY 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+++ C++EI+ RLV+ NF + +VD++G ++
Sbjct: 158 EILQMCVVEIQKRLVINLRNFDVFVVDQNGTQQ 190
>gi|195032049|ref|XP_001988430.1| GH11159 [Drosophila grimshawi]
gi|193904430|gb|EDW03297.1| GH11159 [Drosophila grimshawi]
Length = 222
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 93/153 (60%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP- 61
L ++AA G+ GD +QFT+++ K++ LY+ NG L+ AA++TR LA +R +
Sbjct: 38 LSEFSMLAAVGDGGDTLQFTDYVAKHLQLYRISNGYHLSPRGAAHYTRKNLADYIRTNTI 97
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y V++L+AGYD G L+YID ++ A G GS F S+ R++ +S EA
Sbjct: 98 YQVSMLMAGYDAIEGSDLHYIDSYGASMSINHAGHGLGSLFCGSIFQRYWREDLSQAEAY 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+++ C++EI+ RLV+ NF + +VD++G ++
Sbjct: 158 EILQMCVVEIQKRLVINLRNFDVFVVDQNGTQQ 190
>gi|357620210|gb|EHJ72490.1| proteasome beta 2 subunit-like protein [Danaus plexippus]
Length = 209
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRK-SPYMVNI 66
++ +G GD VQFT+F+ KN+ LY+ RN L + A +FTR +A LR +P ++N+
Sbjct: 50 VLGVNGTTGDIVQFTQFVAKNLRLYEMRNKYGLDSRAVIHFTRKIMADGLRDGNPCLLNV 109
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+AGYD E G LY +D++A+ A G G + SLS++D ++ ++ EA +++
Sbjct: 110 LMAGYDDEAGSQLYSMDFLASYVSAPFAVHGLGGFLSLSILDNYYKPTLTEIEAYEVIKL 169
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGAR 153
C+ EI++RL + NF +K V K G +
Sbjct: 170 CVSEIQNRLFLNLSNFGVKSVTKWGVK 196
>gi|195117644|ref|XP_002003357.1| GI17870 [Drosophila mojavensis]
gi|193913932|gb|EDW12799.1| GI17870 [Drosophila mojavensis]
Length = 221
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 91/153 (59%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L ++AA G+ GD +QFT++I K++ LY NG L+ AA+FTR LA +R +
Sbjct: 38 LSDFAILAAIGDGGDTLQFTDYIAKHLKLYNISNGYHLSPRGAAHFTRKNLADYIRTNTR 97
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y V++LLAGYD GP L++ID ++ A G GS F S+ R++ + ++A
Sbjct: 98 YQVSMLLAGYDSVEGPDLHFIDSYGAAMPINHAGHGLGSLFCGSIFQRYWTHELKQKQAY 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+++ C+ EI+ RLV+ NF + +V+++G +
Sbjct: 158 NILRMCVAEIQKRLVINLRNFDVFVVNRNGTSQ 190
>gi|294940814|ref|XP_002782890.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
gi|239895031|gb|EER14686.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
Length = 138
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 50 RGELATALRKSPYMVNILLAGYDKETGP-SLYYIDYIATLHKVDKAAFGYGSYFSLSMMD 108
R ELA ALRK PY VN+L+ GYD + G SLYY+DY+A+ K+ + A GY +YF L ++D
Sbjct: 31 RNELADALRKGPYQVNMLIGGYDDKDGSASLYYMDYLASCQKITRGAHGYAAYFVLGLLD 90
Query: 109 RHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDK 149
+ + M+ EE +D +++CI E + R ++ NFVIK V+K
Sbjct: 91 KLYKKDMTQEEGLDAINQCIKECKKRFIIDKSNFVIKAVNK 131
>gi|67528518|ref|XP_662061.1| hypothetical protein AN4457.2 [Aspergillus nidulans FGSC A4]
gi|40741032|gb|EAA60222.1| hypothetical protein AN4457.2 [Aspergillus nidulans FGSC A4]
Length = 135
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Query: 34 FRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDK-ETGPSLYYIDYIATLHKV 91
RN L+ A ANF RGELA +LR ++PY VN+LL G D P LY+IDY+A+L V
Sbjct: 1 MRNDTELSPNAVANFVRGELARSLRSRNPYTVNLLLGGVDPISQKPHLYWIDYLASLASV 60
Query: 92 DKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
AA GY Y+ LS +D+H H +++E+ + L++ C E++ RL + ++K+V KDG
Sbjct: 61 PYAAHGYAQYYCLSTLDKHHHPDITLEQGMKLLEMCTDELKRRLPIDYKGVLVKVVTKDG 120
Query: 152 AR 153
R
Sbjct: 121 VR 122
>gi|355714016|gb|AES04861.1| proteasome subunit, beta type, 2 [Mustela putorius furo]
Length = 154
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+
Sbjct: 70 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 129
Query: 67 LLAGYDKETGPSLYYIDYIATLHK 90
LLAGYD+ GP+LYY+DY+A L K
Sbjct: 130 LLAGYDEHEGPALYYMDYLAALAK 153
>gi|443919701|gb|ELU39797.1| proteasome component Pre1 [Rhizoctonia solani AG-1 IA]
Length = 830
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 94/165 (56%), Gaps = 25/165 (15%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
+L + ++A SGEPG LYQ R PL +AA++ R LA +LR +
Sbjct: 37 ILGPNLVMAYSGEPG-------------KLYQMRYVHPLRPPSAASWIRRSLADSLRSRH 83
Query: 61 PYMVNILLAGYD-----------KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDR 109
PY VN+LL G D + PSLY+IDY+ TL +V AA GYGSYF LS+ DR
Sbjct: 84 PYSVNLLLGGVDLAEAPVHAPDGPKGRPSLYWIDYLGTLAEVPFAAHGYGSYFVLSLFDR 143
Query: 110 HFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ + ++EE ++ + + I EI+ RL+V N+ +K++ +DG +E
Sbjct: 144 YHNPQANLEEGLETLRRGIAEIQKRLIVGLENWSVKLITRDGVKE 188
>gi|298706363|emb|CBJ29372.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1328
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 3/157 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRK--S 60
L + L+AASG+ GD F E++++N L Q + P+ A+F R LA LRK +
Sbjct: 65 LSDNVLVAASGDQGDVEMFVEWLKRNAQLMQLESSRPVGARTLAHFARRNLADKLRKQGA 124
Query: 61 PYMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
V LL G+++ P L+++D + L V A G S F+LS++D F GMS++E
Sbjct: 125 GQAVTALLGGWNEVAWQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDE 184
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYA 156
A L++ C ++ R +V+ F +K+VDKDG R+ A
Sbjct: 185 ARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVA 221
>gi|295672696|ref|XP_002796894.1| proteasome component C11 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282266|gb|EEH37832.1| proteasome component C11 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 135
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 34 FRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKET-GPSLYYIDYIATLHKV 91
RN L+ +A ANF RGEL+ +LR + PY VN+LL G D T PSLY++DY+A L V
Sbjct: 1 MRNETELSPSAVANFVRGELSCSLRSRRPYTVNLLLGGVDPITEKPSLYWLDYLAALAPV 60
Query: 92 DKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
AA GY Y+ LS++D+H H ++ E+ + L+ C E++ RL + ++K+V K+G
Sbjct: 61 PYAAHGYAQYYCLSILDKHHHPNITFEQGLKLLQMCTDELKRRLPIDFKGVLVKVVRKEG 120
Query: 152 AREYAWRESVKDTP 165
E + S + P
Sbjct: 121 IEEVDFDNSKQVAP 134
>gi|224102083|ref|XP_002312539.1| predicted protein [Populus trichocarpa]
gi|222852359|gb|EEE89906.1| predicted protein [Populus trichocarpa]
Length = 60
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/55 (87%), Positives = 53/55 (96%)
Query: 115 MSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 169
MSVEEAV+LVDKCI+EIRSRLVVAPPNFVIKIVD+DGAREYAWRESVKDTP + +
Sbjct: 1 MSVEEAVELVDKCIMEIRSRLVVAPPNFVIKIVDRDGAREYAWRESVKDTPTAQS 55
>gi|258566688|ref|XP_002584088.1| proteasome component C11 [Uncinocarpus reesii 1704]
gi|237905534|gb|EEP79935.1| proteasome component C11 [Uncinocarpus reesii 1704]
Length = 137
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Query: 34 FRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKV 91
RN L+ +A ANF RGELA +LR +SPY VN+LL G D T PSLY++DY+A+L V
Sbjct: 1 MRNETELSPSAVANFVRGELARSLRSRSPYTVNLLLGGVDPITQQPSLYWLDYLASLAPV 60
Query: 92 DKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
AA GY Y+ LS++D+H +S ++ + L++ C E++ RL + +K+V KDG
Sbjct: 61 PYAAHGYAQYYCLSILDKHHQPDISYDQGLKLLEMCTDELKRRLPIDFKGVYVKVVTKDG 120
Query: 152 ARE 154
++
Sbjct: 121 IKD 123
>gi|406607227|emb|CCH41488.1| Proteasome component [Wickerhamomyces ciferrii]
Length = 187
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 77/119 (64%), Gaps = 3/119 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
L H L+A +GE GD VQF E+IQ NV LY R L+ A ++FTR ELA ++R
Sbjct: 38 LSKHALMAFTGEAGDTVQFAEYIQANVQLYGIRENYELSPEAISSFTRNELAKSIRSR-- 95
Query: 63 MVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
++N+L+AGYD+ + PSL +IDY+ T ++ AA GY ++++ S++DRH+ + EE
Sbjct: 96 VINVLIAGYDENKKEPSLNWIDYLGTRAELPYAAHGYAAFYTFSLLDRHYRPDFTTEEG 154
>gi|159112684|ref|XP_001706570.1| Proteasome subunit beta type 2 [Giardia lamblia ATCC 50803]
gi|157434668|gb|EDO78896.1| Proteasome subunit beta type 2 [Giardia lamblia ATCC 50803]
Length = 209
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +GE GD +QFT++I+ ++ L R G T ++ANF R ELA A+R+ PY V ++
Sbjct: 44 MIVTGEDGDVLQFTDYIKHSLKLRSLRQGYTPTVKSSANFIRTELARAIREGPYNVYVIT 103
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
G D GP LYY+DY+ T+ + + GY YF LS+M ++ M+ ++A+DL+ CI
Sbjct: 104 GGVDA-AGPQLYYMDYLGTMGEDNFCVQGYSMYFLLSVMSEYWKPDMTKQDALDLIKHCI 162
Query: 129 LEIRSRLVVAPPNFVIKIV 147
+ R ++ P F +
Sbjct: 163 DALGRRFLLQPTKFTASFI 181
>gi|195576095|ref|XP_002077912.1| GD23166 [Drosophila simulans]
gi|194189921|gb|EDX03497.1| GD23166 [Drosophila simulans]
Length = 211
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP--YMVN 65
+I+ +G+ GD +QF++FIQ+N+ LY+ NG LT A +F R +L T RKS Y V
Sbjct: 43 MISTAGDGGDCLQFSDFIQRNMDLYKVTNGYDLTVRGAVHFIRSQLTT-YRKSNCNYKVA 101
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
+L+ GYD +GP L+Y+DY V G G F +++ + M + A D++
Sbjct: 102 LLVGGYDLSSGPELHYMDYFGNSVPVRYGGHGIGINFCTPIIEEFYKPDMDTQAAYDVIK 161
Query: 126 KCILEIRSRLVVAPPNFVIKIVDKDG 151
KC++E+ R V+ NF + +++K+G
Sbjct: 162 KCVIELYKRFVINLRNFDLFLINKEG 187
>gi|253743089|gb|EES99619.1| Proteasome subunit beta type 2 [Giardia intestinalis ATCC 50581]
Length = 165
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +GE GD +QFT++I+ ++ L R G T ++ANF R ELA A+R+ PY V ++
Sbjct: 1 MIVTGEDGDVLQFTDYIKHSLKLRALRQGYKPTVKSSANFVRTELARAIREGPYNVYVIT 60
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
G D GP LYY+DY+ T+ + + GY YF LS+M ++ M+ ++A+DL+ CI
Sbjct: 61 GGVDA-AGPQLYYMDYLGTMGEDNFCVQGYSMYFLLSVMSEYWKPDMTKQDAMDLIRHCI 119
Query: 129 LEIRSRLVVAPPNFVIKIV 147
+ R ++ P F +
Sbjct: 120 DALGRRFLLQPTKFTASFI 138
>gi|195342039|ref|XP_002037609.1| GM18352 [Drosophila sechellia]
gi|194132459|gb|EDW54027.1| GM18352 [Drosophila sechellia]
Length = 211
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP--YMVN 65
+++ +G+ GD +QF++FIQ+N+ LY+ NG LT A +F R +L TA RKS + V
Sbjct: 43 MMSTAGDGGDCLQFSDFIQRNMDLYKVTNGYDLTVRGAVHFIRSQL-TAYRKSNCNFKVA 101
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
+L+ GYD +GP L+Y+DY V G G F +++ + M + A D++
Sbjct: 102 LLVGGYDLSSGPELHYMDYFGNSVPVRYGGHGIGINFCTPIIEEFYKPDMDTQAAYDVIK 161
Query: 126 KCILEIRSRLVVAPPNFVIKIVDKDG 151
KC++E+ R V+ NF + +++K+G
Sbjct: 162 KCVIELYKRFVINLRNFDLFLINKEG 187
>gi|308160864|gb|EFO63331.1| Proteasome subunit beta type 2 [Giardia lamblia P15]
Length = 209
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +GE GD +QFT++I+ ++ L R G T ++ANF R ELA A+R+ PY V ++
Sbjct: 44 MIVTGEDGDVLQFTDYIKHSLKLRSLRQGYTPTVKSSANFIRTELARAIREGPYNVYVIT 103
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
G D GP LYY+DY+ T+ + + GY YF LS+M ++ M+ ++A+ L+ CI
Sbjct: 104 GGVD-AAGPQLYYMDYLGTMGEDNFCVQGYSMYFLLSVMSEYWKPDMTKQDALALIKHCI 162
Query: 129 LEIRSRLVVAPPNFVIKIV 147
+ R ++ P F +
Sbjct: 163 DALGRRFLLQPTKFTASFI 181
>gi|67598498|ref|XP_666223.1| 20S proteasome beta subunit D2 (PBD2) [Cryptosporidium hominis
TU502]
gi|54657181|gb|EAL35998.1| 20S proteasome beta subunit D2 (PBD2) [Cryptosporidium hominis]
Length = 83
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 60/83 (72%)
Query: 19 VQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPS 78
+QF E+I+ N++LY+ RNG+ L+T A ANFTR ELA LR P+ VNIL+ GY KE G
Sbjct: 1 MQFGEYIKCNLNLYRLRNGVQLSTTATANFTRNELAELLRSDPHNVNILIGGYTKEEGAK 60
Query: 79 LYYIDYIATLHKVDKAAFGYGSY 101
LY++D +A+L V+ AA GYG +
Sbjct: 61 LYWMDELASLGNVNNAAHGYGKF 83
>gi|194854881|ref|XP_001968440.1| GG24868 [Drosophila erecta]
gi|190660307|gb|EDV57499.1| GG24868 [Drosophila erecta]
Length = 215
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS-PYMVNI 66
+++ G+ GD +QF++FI +N+ LY+ NG LT A +F R L+ LR + Y V +
Sbjct: 43 MMSTIGDCGDCLQFSDFILRNMDLYKVTNGYDLTVRGAVHFIRSNLSAYLRSNMKYQVAL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+ G+D TGP L+YID + G G F + + + + M+ + A D++ K
Sbjct: 103 LVGGFDLNTGPELHYIDQYGNSIPIRYGGHGAGINFCTPIFEEFYRTHMNTQAAYDVIKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDGAREYA 156
C++E+ R V+ NF + ++ K+G + A
Sbjct: 163 CVIELYKRFVINLRNFDVFLIGKEGITKMA 192
>gi|339236579|ref|XP_003379844.1| proteasome subunit beta type-2 [Trichinella spiralis]
gi|316977428|gb|EFV60530.1| proteasome subunit beta type-2 [Trichinella spiralis]
Length = 227
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 15/143 (10%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRK-SPYMVNILLAGY 71
G+ G+ F E+I++N+ LY FR+G L+ A F R + LR +P++VN++LAGY
Sbjct: 93 GDGGEADVFGEYIERNMHLYNFRHGFKLSPKNIAAFARKTIIDRLRTATPHLVNMILAGY 152
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
D++ GP L IDY+ T FGYG + + EEA+D + C E+
Sbjct: 153 DEQEGPYLSMIDYLGTQFTGPYLMFGYGDF--------------TFEEAMDALKACFQEV 198
Query: 132 RSRLVVAPPNFVIKIVDKDGARE 154
R RL+V +KI+DK+G R+
Sbjct: 199 RKRLIVDVKALQVKIIDKNGVRD 221
>gi|154299945|ref|XP_001550390.1| hypothetical protein BC1G_10863 [Botryotinia fuckeliana B05.10]
Length = 184
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 27/164 (16%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
L+ H L+A SGE GD +QF E+IQ N LY RN I L PY
Sbjct: 47 LNQHTLMAFSGEAGDTIQFAEYIQANAQLYSMRNNIDL--------------------PY 86
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
++ +++ SLY++DY+A+L + AA GY Y+ LS++D+H H + E+ +
Sbjct: 87 AID------RRKSVLSLYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDIDFEQGMK 140
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK-DTP 165
++ C E++ RL + +K++ K+G +E + +S + D P
Sbjct: 141 VLRMCTDELKRRLPIDFKGMTVKVITKEGIKELDYDDSARIDCP 184
>gi|195470819|ref|XP_002087704.1| GE18166 [Drosophila yakuba]
gi|194173805|gb|EDW87416.1| GE18166 [Drosophila yakuba]
Length = 215
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS-PYMVNI 66
+++ G+ GD +QF++FI +N+ LY+ NG LT A +F R L+ LR + Y V +
Sbjct: 43 MMSTIGDGGDCLQFSDFILRNMDLYKVTNGYDLTVRGAVHFIRSNLSAYLRCNMKYQVAL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+ G+D TGP L+YID + G G F + + + S M + A D++ K
Sbjct: 103 LVGGFDSTTGPELHYIDQFGNSVPIRYGGHGAGINFCTPIFEEFYTSHMDSQAAYDVIKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C++E+ R V+ NF + ++ K+G
Sbjct: 163 CVIELYKRFVINLRNFDLFLISKEG 187
>gi|195117638|ref|XP_002003354.1| GI17867 [Drosophila mojavensis]
gi|193913929|gb|EDW12796.1| GI17867 [Drosophila mojavensis]
Length = 214
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL-RKS 60
VL S+ ++ G GD +F +FI VSLY+ NG + T +F R L ++L +
Sbjct: 37 VLSSNSMVGVIGNEGDSTKFADFIATRVSLYEIANGYSMDTPIVTHFARQHLLSSLASRI 96
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
++V++L+A +D + G SL YID ++ + G G+ S+S+ + +S+E+
Sbjct: 97 KFVVSMLVACFDTKRGASLCYIDSKGASQYLNYSGQGIGNSVSMSIFHTMWRPDLSIEDG 156
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ +V +C+ EI+SRL+V +F I ++DK+G R+
Sbjct: 157 LAIVRRCVTEIQSRLIVNFRHFEIFLLDKNGVRK 190
>gi|444708462|gb|ELW49525.1| Proteasome subunit beta type-2 [Tupaia chinensis]
Length = 159
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 69/104 (66%)
Query: 51 GELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRH 110
GE + ++PY VN+ LAGY + GP+LY++D + L K A GYG++ +LS++DR+
Sbjct: 45 GESGDTVHRTPYHVNLFLAGYGQHEGPALYHVDCLVALAKAPFMAHGYGAFLTLSILDRY 104
Query: 111 FHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ +S E A++L+ KC+ E++ R ++ P F I+I+DK+G +
Sbjct: 105 YSPTLSHERAMELLRKCLEELQKRFILNLPTFSIRIIDKNGIHD 148
>gi|195437302|ref|XP_002066579.1| GK24488 [Drosophila willistoni]
gi|194162664|gb|EDW77565.1| GK24488 [Drosophila willistoni]
Length = 212
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRK-SP 61
+ H +IA G+ +Q + +I N+ LYQ +NG + A+ANF R L T ++
Sbjct: 43 ISDHSVIAVMGDGAHALQISSYISSNLHLYQIQNGYFPSAEASANFARQSLVTYMKNLVK 102
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
+++L+A YDK+ G L+ ID + H V A G S S +++ + ++ +
Sbjct: 103 VRISVLIASYDKQRGAELFLIDSLGNSHSVKYAGHGCASGLSNNILQSEWKPDLTRTQGH 162
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L+ KCI + RL++ NF++ +VDKDG +E
Sbjct: 163 ALLKKCICTVHHRLILNLRNFIVIMVDKDGVQE 195
>gi|308485256|ref|XP_003104827.1| CRE-PBS-4 protein [Caenorhabditis remanei]
gi|308257525|gb|EFP01478.1| CRE-PBS-4 protein [Caenorhabditis remanei]
Length = 204
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGY 71
GE GD QF ++ ++N+ LY RNG ++ A A +F R +A LR K Y V++L+ GY
Sbjct: 52 GEEGDVAQFGDWTKRNLQLYSVRNGYEVSPACAHHFVRRSIAEGLRSKDHYTVDVLIGGY 111
Query: 72 D-KETGPSLYYIDYIAT--LHKVDKAAF-GYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
D KE L +DY+A +V F G+ F ++MDR + MS E + L++KC
Sbjct: 112 DDKEEKAFLGSVDYLANGLAQQVFPYLFRGFCGRFCYAIMDREYKKDMSEAEGLALMNKC 171
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGARE 154
I E + R V P + + I+DK G R+
Sbjct: 172 IGEAKRRFVANIPGYKVVIIDKKGYRK 198
>gi|341876605|gb|EGT32540.1| hypothetical protein CAEBREN_25994 [Caenorhabditis brenneri]
gi|341877137|gb|EGT33072.1| hypothetical protein CAEBREN_23993 [Caenorhabditis brenneri]
Length = 202
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGY 71
GE GD QF ++ ++N+ LY RNG ++ A A +F R +A LR + Y V++L+ GY
Sbjct: 52 GEEGDVAQFGDWTKRNLQLYSVRNGYEVSPACAHHFVRRSIAEGLRSQDHYTVDVLIGGY 111
Query: 72 D-KETGPSLYYIDYIATLHKVDKAAF-GYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCIL 129
D KE L +DY+A F G+ F ++MDR + MS + + L++KCI
Sbjct: 112 DDKEEKAFLGSVDYLANGLAQQPYLFRGFCGRFCYAIMDREYKKDMSEADGLALMNKCIG 171
Query: 130 EIRSRLVVAPPNFVIKIVDKDGARE 154
E + R V P + + I+DK+G R+
Sbjct: 172 EAKRRFVANIPGYKVVIIDKNGYRK 196
>gi|294936013|ref|XP_002781591.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
gi|239892451|gb|EER13386.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
Length = 112
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 53/74 (71%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D++KL+AA+G D QF EFI +NV LY NGI LTT A ANFTR ELA ALRK PY
Sbjct: 39 MDNNKLVAAAGPQADSNQFLEFISRNVELYALVNGIQLTTHALANFTRNELADALRKGPY 98
Query: 63 MVNILLAGYDKETG 76
VN+L+ GYD + G
Sbjct: 99 QVNMLIGGYDDKDG 112
>gi|24581176|ref|NP_608698.2| proteasome beta4R1 subunit [Drosophila melanogaster]
gi|18447102|gb|AAL68142.1| AT30033p [Drosophila melanogaster]
gi|22945374|gb|AAF51231.3| proteasome beta4R1 subunit [Drosophila melanogaster]
gi|220950992|gb|ACL88039.1| CG17301-PA [synthetic construct]
gi|220957990|gb|ACL91538.1| CG17301-PA [synthetic construct]
Length = 215
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 81/145 (55%), Gaps = 1/145 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRK-SPYMVNI 66
+++ +G+ GD ++F++FI +N+ LY+ NG LT A +F R L+ L+ + V++
Sbjct: 43 MMSTAGDGGDCLKFSDFILRNMDLYKITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSL 102
Query: 67 LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
L+ GYD +GP L+YIDY+ V G F +++ + M + A D++ K
Sbjct: 103 LVGGYDLTSGPELHYIDYLGNSVPVRYGGHGAAMNFCTPILEEFYKPDMDTQAAYDVIKK 162
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
C++E+ R V+ N + ++ K+G
Sbjct: 163 CVIELYKRFVINLRNIDLFLISKNG 187
>gi|17508497|ref|NP_491261.1| Protein PBS-4 [Caenorhabditis elegans]
gi|351060149|emb|CCD67779.1| Protein PBS-4 [Caenorhabditis elegans]
Length = 202
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGY 71
GE GD QF ++ ++N+ LY RNG ++ + A +F R +A LR + Y V++L+ GY
Sbjct: 52 GEEGDVAQFGDWTKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVLIGGY 111
Query: 72 D-KETGPSLYYIDYIATLHKVDKAAF-GYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCIL 129
D KE L +DY+A F G+ F ++MDR + M+ E + L++KCI
Sbjct: 112 DDKEDKAFLGSVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIG 171
Query: 130 EIRSRLVVAPPNFVIKIVDKDGARE 154
E + R V P + + I+DK G R+
Sbjct: 172 EAKRRFVANIPGYKVVIIDKKGYRK 196
>gi|294936022|ref|XP_002781593.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
gi|239892458|gb|EER13388.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
Length = 115
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D++KL+AA+G D QF EFI +NV LY NGI LTT A A+FTR ELA ALRK PY
Sbjct: 39 MDNNKLVAAAGPQADSSQFLEFISRNVELYALVNGIQLTTHALASFTRNELADALRKGPY 98
Query: 63 MVNILLAGYDKETGPS 78
VN+L+ GYD + G +
Sbjct: 99 QVNMLIGGYDDKDGSN 114
>gi|17380193|sp|P91477.2|PSB2_CAEEL RecName: Full=Proteasome subunit beta type-2; AltName:
Full=Proteasome subunit beta 4
Length = 199
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGY 71
GE GD QF ++ ++N+ LY RNG ++ + A +F R +A LR + Y V++L+ GY
Sbjct: 49 GEEGDVAQFGDWTKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVLIGGY 108
Query: 72 D-KETGPSLYYIDYIATLHKVDKAAF-GYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCIL 129
D KE L +DY+A F G+ F ++MDR + M+ E + L++KCI
Sbjct: 109 DDKEDKAFLGSVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIG 168
Query: 130 EIRSRLVVAPPNFVIKIVDKDGARE 154
E + R V P + + I+DK G R+
Sbjct: 169 EAKRRFVANIPGYKVVIIDKKGYRK 193
>gi|300120657|emb|CBK20211.2| unnamed protein product [Blastocystis hominis]
Length = 124
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 44 AAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFS 103
A A+ R +A LR+ PY VN +L G D + PS+YY+DY+ TL K++ A+ GY SY
Sbjct: 3 ATAHSFRNTVAYYLRRQPYQVNFILGGVDDDV-PSIYYLDYLGTLQKMNYASHGYPSYIL 61
Query: 104 LSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
L++ DR + M+ EEA++L ++C E++ R + ++V KIV K+G
Sbjct: 62 LALFDRLWKKDMTREEALELCNRCQEEMKGRFPMNEHHYVTKIVSKNG 109
>gi|162606464|ref|XP_001713262.1| 26S proteasome chain protein [Guillardia theta]
gi|12580728|emb|CAC27046.1| 26S proteasome chain protein [Guillardia theta]
Length = 193
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
L + K + SG PGD +F EFIQK++ Y +N L+ + ANF R EL +LRK+P
Sbjct: 38 LGNDKFLLVSGIPGDVSKFLEFIQKSIQFYVLKNNSKLSNHSIANFIRFELWKSLRKNPI 97
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+N++L G DK G SLY +D+ +L +++ G GS S +++ F +S ++
Sbjct: 98 KINLILFGIDKIFGTSLYALDHYGSLLRLNYCVKGMGSSLIYSFLEKSFKDNISSTNSIK 157
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIV 147
L+ CI I+ R ++ F +K++
Sbjct: 158 LIINCIKIIKKRFILNTTKFFVKVI 182
>gi|194777793|ref|XP_001967865.1| GF20768 [Drosophila ananassae]
gi|190631497|gb|EDV44914.1| GF20768 [Drosophila ananassae]
Length = 212
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 88/161 (54%), Gaps = 5/161 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
L + ++AA+G+ D +QFT+FI +N+ LY+ N ++ A +FTR LA+ LR +
Sbjct: 38 LTNFSMMAAAGDASDSLQFTDFIVRNMHLYKIINSYHMSIPAVVHFTRTHLASFLRCDTQ 97
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
+N+LL G+D TGP L+YID + + G G F + D M EA
Sbjct: 98 RQLNLLLGGFDPWTGPELHYIDRFGSSTAILFGGHGAGIKFCGPIFDTLHSPYMDQREAY 157
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK 162
+++KC+ EI+ RL NF + ++D+ G ++ E++K
Sbjct: 158 CILEKCVGEIQRRL-WNQRNFDVFVMDQQGITQW---ETIK 194
>gi|324507573|gb|ADY43210.1| Aldehyde dehydrogenase family 7 member A1 [Ascaris suum]
Length = 613
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 86/155 (55%), Gaps = 3/155 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
L + ++ GE GD QF ++ ++N+ LY+ R G ++ + ++ R +A +LR Y
Sbjct: 453 LGNKLVMLCIGEDGDVAQFGDWSKRNIQLYKLRYGYEMSPRSCHHWIRRSIAESLRSEDY 512
Query: 63 -MVNILLAGYDK-ETGPSLYYIDYIATLHKVDKAAF-GYGSYFSLSMMDRHFHSGMSVEE 119
+V+ L+ GYD+ E L +DY+ F G+ F +++DR + S MS E
Sbjct: 513 YIVDTLIGGYDEFEKKAFLGSVDYLGNGLADQPYLFRGFSGRFCYAILDRLYRSDMSEAE 572
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++++ KC++E + R V PNF + ++DK+G R+
Sbjct: 573 GLNVLKKCLMEAKRRFVANLPNFQVMVIDKNGFRQ 607
>gi|170585040|ref|XP_001897296.1| proteasome subunit beta type 2 [Brugia malayi]
gi|158595293|gb|EDP33858.1| proteasome subunit beta type 2, putative [Brugia malayi]
Length = 202
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGY 71
GE GD QF ++ ++N+ LY+ R G ++ ++ ++ R +A ALR + Y+V+ L+ GY
Sbjct: 52 GEDGDVAQFGDWCKRNIQLYKLRYGYEMSPRSSHHWIRRSIAEALRTQDYYVVDTLIGGY 111
Query: 72 DK-ETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
D E L +DY+ +D+ G+ S++D+ + S MS E+ + L+ KC+
Sbjct: 112 DSIENKAFLGSVDYLGN-GIIDQPYIFRGFSGRLCYSILDKTYRSDMSEEDGIGLLKKCL 170
Query: 129 LEIRSRLVVAPPNFVIKIVDKDGARE 154
E + R +V P F + ++DK+G R+
Sbjct: 171 HESKRRFIVNLPAFEVMVIDKNGTRQ 196
>gi|312076399|ref|XP_003140843.1| proteasome subunit beta type 2 [Loa loa]
gi|307763992|gb|EFO23226.1| proteasome subunit beta type 2 [Loa loa]
Length = 238
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGY 71
GE GD QF ++ ++N+ LY+ R G ++ ++ ++ R +A ALR + Y+V+ L+ GY
Sbjct: 88 GEDGDVAQFGDWCKRNIQLYKLRYGYEMSPRSSHHWIRRSIAEALRTQDYYVVDTLIGGY 147
Query: 72 DK-ETGPSLYYIDYIATLHKVDKAAF-GYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCIL 129
D E L +DY+ F G+ S++D+ + + M+ E +DL+ KC+
Sbjct: 148 DSIENKAFLGSVDYLGNGIADQPYIFRGFSGRLCYSILDKTYRNDMTEAEGMDLLKKCLH 207
Query: 130 EIRSRLVVAPPNFVIKIVDKDGARE 154
E + R +V P F + ++DK+G R+
Sbjct: 208 ESKRRFIVNLPAFEVMVIDKNGTRQ 232
>gi|268560948|ref|XP_002646328.1| C. briggsae CBR-PBS-4 protein [Caenorhabditis briggsae]
Length = 196
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGY 71
GE GD QF ++ ++N+ LY RN A+A +F R +A LR + Y V++L+ GY
Sbjct: 52 GEEGDVAQFGDWTKRNLQLYSVRN------ASAHHFVRRSIAEGLRSQDHYTVDVLIGGY 105
Query: 72 D-KETGPSLYYIDYIATLHKVDKAAF-GYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCIL 129
D KE L +DY+A F G+ F ++MD + MS E + L++KCI
Sbjct: 106 DDKEEKAFLGSVDYLANGLAQQPYLFRGFCGRFCYAIMDHEYKKDMSETEGLALMNKCIG 165
Query: 130 EIRSRLVVAPPNFVIKIVDKDGARE 154
E + R V P + + I+DK+G R+
Sbjct: 166 EAKRRFVANIPGYKVVIIDKNGYRK 190
>gi|224001698|ref|XP_002290521.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973943|gb|EED92273.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 132
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 8/121 (6%)
Query: 40 LTTAAAANFTRGELATALR-KSPYMVNILLAGYDKET--GPSLYYIDYIATLHKVDKAAF 96
L T A A R E+A++LR + P + +L+ G + P LY++D ++ + A
Sbjct: 10 LDTEAVAYLARSEIASSLRSRQPIQLCLLVGGMVRNPFLMPRLYWLDQYGSIQNLKYGAH 69
Query: 97 GYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV---APPNFVIKIVDKDGAR 153
G+GS F+LS++D+ F S +S +EA++L+ +C ++R R V+ PP IK +D G +
Sbjct: 70 GFGSNFALSVLDQRFRSNLSRKEAMELIRECFEQLRQRYVINSPQPPR--IKCIDAFGVK 127
Query: 154 E 154
E
Sbjct: 128 E 128
>gi|396081828|gb|AFN83442.1| proteasome subunit beta-type 2 [Encephalitozoon romaleae SJ-2008]
Length = 197
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP 61
V+ +++ G+ GD + + ++ + +NGI ++ + A+ + ++ +LRK
Sbjct: 37 VIKDKVVMSVVGDQGDAFRTMLNVSESARYEEIQNGIEISPSVLAHMIQNKVHESLRKRQ 96
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
+ ++AG E G L+ +D + V A GY +YF ++DR + +++++A+
Sbjct: 97 LDASTIIAGKGPE-GYDLWSVDRYGAISSVPFCASGYAAYFVYGILDREYSENITIDDAL 155
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
++ KCI ++ RL++ F+IKIV DG +KD
Sbjct: 156 KIIQKCINLLKERLIINLEGFMIKIVTDDGVLTKTLAPEIKD 197
>gi|401827228|ref|XP_003887706.1| proteasome subunit beta type-2 [Encephalitozoon hellem ATCC 50504]
gi|392998713|gb|AFM98725.1| proteasome subunit beta type-2 [Encephalitozoon hellem ATCC 50504]
Length = 197
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYD 72
G+ GD + + ++ + +NGI L+ + A+ + ++ +LRK + ++AG
Sbjct: 48 GDQGDAFRTILSVSESAQYEEIQNGIELSPSVLAHMVQSKVHESLRKRQLDTSTIIAGKG 107
Query: 73 KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIR 132
+ G L+ +D + V A GY +YF ++DR + ++V++A+ ++ KCI ++
Sbjct: 108 PQ-GYDLWSVDKYGAISSVPFCASGYAAYFVYGILDREYSEDITVDDALRIIQKCINLLK 166
Query: 133 SRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
RLV+ F++K+V +G +KD
Sbjct: 167 ERLVIGLEGFMVKVVTDEGVLTKTLAPEIKD 197
>gi|303390170|ref|XP_003073316.1| proteasome subunit beta-type 2 [Encephalitozoon intestinalis ATCC
50506]
gi|303302462|gb|ADM11956.1| proteasome subunit beta-type 2 [Encephalitozoon intestinalis ATCC
50506]
Length = 197
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYD 72
G+ GD + ++ ++ + +NGI L+ + A+ + ++ ALRK ++ ++ G
Sbjct: 48 GDQGDAFRTMLYVSESAYYEEIQNGIELSPSVLAHMIQNKVHKALRKRQLDMSSIVGGKG 107
Query: 73 KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIR 132
E G L+ +D + V A GY +YF + DR + ++++ A++++ KCI ++
Sbjct: 108 PE-GYDLWSVDRYGAISSVPFCANGYAAYFVYGIFDREYTEDITIDAALNIIQKCINLLK 166
Query: 133 SRLVVAPPNFVIKIVDKDG 151
RL++ F++KIV DG
Sbjct: 167 ERLMINLEGFMVKIVTDDG 185
>gi|19173354|ref|NP_597157.1| PROTEASOME BETA-TYPE COMPONENT C7-1 [Encephalitozoon cuniculi
GB-M1]
gi|74630115|sp|Q8SRF1.1|PSB4_ENCCU RecName: Full=Probable proteasome subunit beta type-4; AltName:
Full=26S proteasome beta-type subunit PRE1; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE1
gi|19170943|emb|CAD26333.1| PROTEASOME BETA-TYPE COMPONENT C7-1 [Encephalitozoon cuniculi
GB-M1]
Length = 197
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP 61
V+ ++A +G GD + ++ ++ + +NGI L+ + A+ + ++ +LR+
Sbjct: 37 VIKDRIVMAMTGNQGDAFRTMLYVSESALYEEIQNGIELSPSVLAHMIQNKVHESLRRRQ 96
Query: 62 YMVNILLAGYDKETGPS---LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
++ ++AG GP L+ +D + V A GY +YF ++DR + ++++
Sbjct: 97 LDISSIVAG----RGPEKYDLWSVDKYGAISSVPFCASGYAAYFVYGILDREYSEDITID 152
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
A+ ++ KC+ ++ RL++ F++KIV DG
Sbjct: 153 AALSIMQKCVNLLKERLMINLEGFMVKIVTDDG 185
>gi|449328867|gb|AGE95143.1| proteasome beta-type component c7-1 [Encephalitozoon cuniculi]
Length = 197
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP 61
V+ ++A +G GD + ++ ++ + +NGI L+ + A+ + ++ +LR+
Sbjct: 37 VIKDRIVMAMTGNQGDAFRTMLYVSESALYEEIQNGIELSPSVLAHMIQNKVHESLRRRQ 96
Query: 62 YMVNILLAGYDKETGPS---LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
++ ++AG GP L+ +D + V A GY +YF ++DR + ++++
Sbjct: 97 LDMSSIVAG----RGPEKYDLWSVDKYGAISSVPFCASGYAAYFVYGILDREYSEDITID 152
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
A+ ++ KC+ ++ RL++ F++KIV DG
Sbjct: 153 AALSIMQKCVNLLKERLMINLEGFMVKIVTDDG 185
>gi|300706947|ref|XP_002995703.1| hypothetical protein NCER_101331 [Nosema ceranae BRL01]
gi|239604901|gb|EEQ82032.1| hypothetical protein NCER_101331 [Nosema ceranae BRL01]
Length = 193
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYD 72
G+ GD + F+++ + + +N + +T AN + + +LR P + N L G
Sbjct: 48 GDQGDAFRTASFVKEKLIYEEIQNNVEITPKVTANIIQKSIYRSLRSRP-IENYFLIGGL 106
Query: 73 KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIR 132
+ GP LY +D ++++ + A G +YF ++D+ + ++ ++A++++ KC ++
Sbjct: 107 TDNGPELYSVDVYGSMYENNFMAVGIATYFCYGVLDKEYTEDINKDKAIEVLYKCFDVLK 166
Query: 133 SRLVVAPPNFVIKIVDKDGAR 153
R V N I+I+ K+G
Sbjct: 167 ERCSVDISNIDIRIISKEGVE 187
>gi|440493576|gb|ELQ76031.1| 20S proteasome, regulatory subunit beta type PSMB2/PRE1, partial
[Trachipleistophora hominis]
Length = 293
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
++A G F + + L +PL AA F + + LR P +
Sbjct: 143 VLAHCGSFQQCCDLRNFFTETIKLKTLDEQVPLCPQTAAFFIQKVIHGQLRAQPMESAFM 202
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G D SLY +D L + GY +F ++D+ + MSV+EAV+++ KC
Sbjct: 203 VMGKD----GSLYAVDQYGALSTSNYMCMGYSRFFLYGLLDKEYREDMSVDEAVNVLQKC 258
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESV 161
I ++SR + +++KI + D R R SV
Sbjct: 259 IDLMKSRFLFNYQRYMVKIFENDRLRSVELRPSV 292
>gi|397651896|ref|YP_006492477.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|393189487|gb|AFN04185.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 203
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS-- 60
+D H IA +G+ GD + ++ +LY+ G ++ A A LA L S
Sbjct: 44 IDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATL----LANILNGSKY 99
Query: 61 -PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY+ L+ GYD++ P L+ +D + + + + AA G G F+ S++D + MSV +
Sbjct: 100 FPYLGWFLVGGYDEK--PRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVND 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+ L K I R V ++ + KDG +EY E
Sbjct: 158 GIKLAVKAINVAIKRDVFTGDGLLVVTITKDGYKEYRGAE 197
>gi|18977776|ref|NP_579133.1| proteasome subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|25453238|sp|Q8U125.1|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
Length = 206
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS-- 60
+D H IA +G+ GD + ++ +LY+ G ++ A A LA L S
Sbjct: 47 IDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATL----LANILNGSKY 102
Query: 61 -PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY+ L+ GYD++ P L+ +D + + + + AA G G F+ S++D + MSV +
Sbjct: 103 FPYLGWFLVGGYDEK--PRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVND 160
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+ L K I R V ++ + KDG +EY E
Sbjct: 161 GIKLAVKAINVAIKRDVFTGDGLLVVTITKDGYKEYRGAE 200
>gi|238583712|ref|XP_002390329.1| hypothetical protein MPER_10415 [Moniliophthora perniciosa FA553]
gi|215453616|gb|EEB91259.1| hypothetical protein MPER_10415 [Moniliophthora perniciosa FA553]
Length = 70
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 90 KVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDK 149
+V AA GYGS+F+LS++DR+ ++EE + + +CI E+ RLVV+P + +K+VDK
Sbjct: 3 EVPYAAHGYGSFFALSLLDRYHDPNATLEEGLATLKRCIDEVTKRLVVSPGKYKVKVVDK 62
Query: 150 DGAREYAW 157
DG RE +
Sbjct: 63 DGTREVKF 70
>gi|350525853|ref|YP_002582771.2| proteasome subunit beta [Thermococcus sp. AM4]
gi|345650672|gb|EEB74119.2| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 194
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H IA +G GD + ++ LY+ R G ++ A A L + R PY
Sbjct: 40 VDDHLAIAGAGLVGDILSLVRLLRAEAKLYRARVGREMSVKAMATLVSNVLHGS-RYLPY 98
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
L+ GYD P LY ID + + A G G F+L++++ +F GM +EE VD
Sbjct: 99 FAWFLIGGYDVR--PRLYSIDAAGGVTEERFIAAGSGMEFALALLEENFSDGMDLEEGVD 156
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L + + R V + + K+G RE
Sbjct: 157 LAVRAVKAAMRRDVYTGEGVTVVTITKEGYRE 188
>gi|395645475|ref|ZP_10433335.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
gi|395442215|gb|EJG06972.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
Length = 212
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD +Q SLY+ R+G P++ AAA L R PY V +L+
Sbjct: 54 MTTAGGVGDAQSLARLMQVECSLYKVRHGKPISVGAAATLLSNYLQQN-RYYPYYVQLLV 112
Query: 69 AGYDKETGPSLYYIDYIATLHK-VDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G D+ GPS+Y +D + K D + G GS + +++ +H+ M+ EAVDL +
Sbjct: 113 GGVDR-NGPSVYSVDAMGGASKETDIVSTGSGSPMAYGVLEDRYHADMNEPEAVDLATRS 171
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREYAWR 158
+ R + N I ++ +D E A +
Sbjct: 172 LKAAMRRDSASGENISIVVITRDKYEEKAVQ 202
>gi|374628281|ref|ZP_09700666.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
gi|373906394|gb|EHQ34498.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
Length = 206
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G GD Q +Q SL+ R G P+ AAA L R PY V +L+ G
Sbjct: 57 AGGVGDAQQLARLMQVECSLFNIRRGRPIAVGAAATLLSNVLNQN-RMFPYYVQLLVGGI 115
Query: 72 DKETGPSLYYIDYIATLHKVDK-AAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ GPS+Y +D + D+ A G GS F+ +++ F GMS +E +DL + +
Sbjct: 116 DR-YGPSIYSVDALGGASPEDRIVATGSGSPFAYGVLEDRFEEGMSEKECLDLAIRALRS 174
Query: 131 IRSRLVVAPPNFVIKIVDKD 150
R + + I ++ KD
Sbjct: 175 AMKRDSASGEDISIVVITKD 194
>gi|429961416|gb|ELA40961.1| hypothetical protein VICG_01991 [Vittaforma corneae ATCC 50505]
Length = 196
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 5 SHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMV 64
S L+ +GE GD + +++ L + + A E+ +LR P V
Sbjct: 40 SGSLVCITGEQGDSFRTVSLLEQYSKLLSMKYKEKIGPELLARLLSSEIYESLRSRPLEV 99
Query: 65 NILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
++ G ++ L+ ID +H+ + GYG YF + D + MS EEA+ L+
Sbjct: 100 QGIVGGRSEDNTLKLFGIDKYGAVHEDNFVVTGYGLYFLFGIYDMMYKKDMSEEEALSLI 159
Query: 125 DKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
C+ ++ RLV+ + + ++ +GAR
Sbjct: 160 RNCLKTLKERLVLETDKWKLDVIGPEGAR 188
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H +G GD + E+++ V LY+ R G P T AAA+ L A R P+
Sbjct: 46 IDEHLATTVAGSVGDAQKLVEYLKAEVRLYKLRTGKPATVRAAASIASNILH-ASRMFPF 104
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+V +L+ G D ETGP +Y +D + + G GS + +++ + MSVE+A++
Sbjct: 105 IVQMLIGGID-ETGPKIYSVDPAGGKIEDKYVSTGSGSPIAYGVLEDRYKKDMSVEDAIN 163
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIV-DKDGAREY 155
+ + I R + + +V +K+G + +
Sbjct: 164 IALRAIKSSTKRDTFSGDGISLAVVTEKEGFKRF 197
>gi|222445334|ref|ZP_03607849.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
DSM 2375]
gi|261350105|ref|ZP_05975522.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
gi|222434899|gb|EEE42064.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobrevibacter smithii DSM 2375]
gi|288860891|gb|EFC93189.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
Length = 204
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ H + +G GD + I+ VSLYQ RN ++ AAA+ T A LR P
Sbjct: 45 INDHIVTTIAGSVGDAQNLMKIIEAEVSLYQMRNNDKMSVKAAASVT----ANILRSGPM 100
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V LL G D + PSLY +D + + + G GS + +++ +H ++ +E ++
Sbjct: 101 YVQTLLGGMDGDK-PSLYSLDPAGGMIEDTYISTGSGSIVAYGVLEDRYHEEITTDEGLE 159
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
+ + I R + +++ V KDG E +E V D
Sbjct: 160 IAVRAIKAASERDTFSGNGYLVAKVTKDGF-EMLDKEKVND 199
>gi|397780986|ref|YP_006545459.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
gi|396939488|emb|CCJ36743.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
Length = 214
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD Q IQ SLY+ R G ++ AA+ L R PY V +L+
Sbjct: 54 MTTAGGVGDAQQLVRIIQVECSLYEMRRGRTMSVGAASTLLSNYLNQN-RYYPYYVQLLM 112
Query: 69 AGYDKETGPSLYYIDYIATLHKVDK-AAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G+D E GPS+Y +D + + ++ A G GS F+ +++ + M+ EEA DL +
Sbjct: 113 GGFD-EGGPSVYSVDAMGGATREEEIVATGSGSPFAYGVLEDQYRPDMTEEEAKDLAIRA 171
Query: 128 ILEIRSRLVVAPPNFVIKIVDKD 150
+ R + N ++ ++ KD
Sbjct: 172 VRSAMRRDAGSGENIMVVVIMKD 194
>gi|375082946|ref|ZP_09729987.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
gi|374742376|gb|EHR78773.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
Length = 204
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H +A +G GD + ++ LY+ R G ++T A A T + + R PY
Sbjct: 43 IDDHLALAGAGSVGDILSLVRLLRAEAKLYRARVGREMSTKALATLTS-NILSGRRYFPY 101
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
L+AGYD++ P LY ID + + + G G F+ S++D + M+V++ V
Sbjct: 102 FGWFLVAGYDEK--PGLYSIDMAGGITEDKYVSAGSGMEFAYSVLDNEYDEKMNVKKGVK 159
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
L K I R V ++ ++ K+G E + E
Sbjct: 160 LAIKAINTAIKRDVFTGDGIMVVVITKEGYSELSKEE 196
>gi|47185648|emb|CAF87242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 99
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 36/51 (70%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR 58
L+ GE GD VQF E+IQKNV LY+ RNG L+ +AAANFTR LA LR
Sbjct: 43 LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPSAAANFTRKNLAEYLR 93
>gi|148643097|ref|YP_001273610.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
gi|302595842|sp|A5UM14.1|PSB_METS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|148552114|gb|ABQ87242.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
Length = 204
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ H + +G GD + I+ VSLYQ RN ++ AAA+ T A LR P
Sbjct: 45 INDHIVTTIAGSVGDAQNLMKIIEAEVSLYQMRNNDKISVKAAASVT----ANILRSGPM 100
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V LL G D + PSLY +D + + + G GS + +++ +H ++ +E ++
Sbjct: 101 YVQTLLGGMDGDK-PSLYSLDPAGGMIEDTYISTGSGSIVAYGVLEDRYHEEITTDEGLE 159
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
+ + I R + +++ V KDG E +E V D
Sbjct: 160 IAVRAIKAASERDTFSGNGYLVAKVTKDGF-EMLDKEKVND 199
>gi|337284212|ref|YP_004623686.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334900146|gb|AEH24414.1| proteasome beta subunit precursor [Pyrococcus yayanosii CH1]
Length = 204
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 3/157 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D IA +G GD + ++ V LY+ R G ++ A A + R PY
Sbjct: 44 IDERLAIAGAGNVGDILSLVRLLRAEVRLYRSRVGRSMSAKALATLL-ANILNGTRYFPY 102
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+V L+ GYD P LY +D + + A G G F+ S++D + MSVEE V
Sbjct: 103 LVWFLVGGYDD--APRLYSVDMAGGITEDKYVAAGSGMEFAFSILDSQYKPEMSVEEGVK 160
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
L + I R V + + + G RE + E
Sbjct: 161 LAVRAINSAIKRDVFTGEGITVVTITEKGYRELSEEE 197
>gi|332158405|ref|YP_004423684.1| proteasome subunit beta [Pyrococcus sp. NA2]
gi|331033868|gb|AEC51680.1| proteasome, subunit beta [Pyrococcus sp. NA2]
Length = 216
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
I +G GD ++ YQF G P++T A AN L R PY+V I++
Sbjct: 68 ITTAGSVGDVQMIARILEAEARYYQFTWGRPMSTKAMANLLSNILNEN-RWFPYLVQIII 126
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
GY +E P++ +D + L D A G G+ F+L++++ + + +E+A DL K I
Sbjct: 127 GGYVEE--PTIANLDPLGGLIFEDYTATGSGTPFALAILEEGYRKNLGIEKAKDLAIKAI 184
Query: 129 LEIRSRLVVAPPNFV-IKIVDKDGARE 154
SR V V + + KDG RE
Sbjct: 185 KAAGSRDVYTGSKKVQVMTITKDGMRE 211
>gi|219118149|ref|XP_002179855.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408908|gb|EEC48841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 283
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 24 FIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSL 79
F ++N+ LY+ RNG +T AAA+ + +A R + ++ G+D ETGP L
Sbjct: 128 FWERNLGMECRLYELRNGRRITVAAASKLL-ANVMSAYRGYGLSMGTMITGWD-ETGPQL 185
Query: 80 YYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSR 134
YY+D T K + G GS ++ ++D H+ +SVEEA+DL + I R
Sbjct: 186 YYVDNDGTRLKGKYFSVGSGSMYAYGVLDNHWREDLSVEEAIDLGKRAIYHATHR 240
>gi|240103778|ref|YP_002960087.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595756|sp|C5A7L1.1|PSB1_THEGJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|239911332|gb|ACS34223.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 201
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H IA +G GD + ++ LY+ + G ++ A A L + R PY
Sbjct: 47 IDDHLAIAGAGLVGDILSLVRLLRAEAKLYRAKVGREMSVKALATLVSNVLHGS-RHLPY 105
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
L+ GYD + P LY ID + + A G G F+L++++ +F GM ++E +D
Sbjct: 106 FAWFLIGGYDVK--PRLYSIDAAGGVTEERFIAAGSGMEFALALLEENFSDGMGLDEGID 163
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L + + R V + + K+G RE
Sbjct: 164 LAVRAVKAAIRRDVYTGEGVTVVAITKEGYRE 195
>gi|389852762|ref|YP_006354996.1| proteasome, subunit beta [Pyrococcus sp. ST04]
gi|388250068|gb|AFK22921.1| putative proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 173
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H IA +G+ GD + ++ LY+ G P++ A A + + PY
Sbjct: 13 VDEHLAIAGAGDVGDILSLVRLLRAEARLYKANVGKPMSVKALATLL-ANILNGTKYFPY 71
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V L+ GYD+E P ++ +D + + A G G F+ S++D + +SV+E +
Sbjct: 72 FVWFLVGGYDEE--PRMFSVDMAGGVTEDKYVAAGSGMEFAYSVLDSEYKEDLSVKEGIK 129
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYA 156
L K I R V + ++ + ++G +EY+
Sbjct: 130 LAVKAINVAIKRDVFSGDGILVVTITREGYQEYS 163
>gi|355571914|ref|ZP_09043122.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
gi|354825010|gb|EHF09245.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
Length = 213
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD Q + SLYQ R G P+T A A + A R P+ V +L+
Sbjct: 54 MTTAGGVGDAQQIARLMTVECSLYQIRRGRPITIGAVATLLS-NILNANRYYPFYVQLLV 112
Query: 69 AGYDKETGPSLYYIDYIATLHKVDK-AAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G D E GP LY +D + + ++ A G GS + +++ + +S +EAV L +
Sbjct: 113 GGVD-EGGPKLYAVDALGGASREEEMVATGSGSPMAFGVLEDRYSKDLSEDEAVALAVRA 171
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 169
I R + + ++ K+ RE E +PVS A
Sbjct: 172 IRSAMKRDAGSGEGIHVVVITKEAYRELTESEIAGLSPVSPA 213
>gi|288561233|ref|YP_003424719.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
gi|302595755|sp|D3E0A3.1|PSB_METRM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288543943|gb|ADC47827.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
Length = 207
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D+H +G D + I SLY+ RNG ++ AAA + + L SP
Sbjct: 46 IDNHIAATIAGSVADAQTLMKVISAETSLYRLRNGKDISLEAAAAVS----SNILHSSPA 101
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V L+ G D +TG S+Y +D + K + G GS F+ +++ F+ ++VEEA +
Sbjct: 102 YVQTLIGGVD-DTGASIYSLDAAGGMIKDTFISTGSGSTFAYGVLEDRFYEDITVEEATE 160
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ + I R + F++ V KDG
Sbjct: 161 VAIRAIKAATERDTFSGNGFLVANVTKDG 189
>gi|223477879|ref|YP_002582184.1| proteasome subunit beta [Thermococcus sp. AM4]
gi|214033105|gb|EEB73933.1| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 200
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
I +G GD ++ YQF G P+TT A AN L+ L ++ PYMV
Sbjct: 50 ITTAGSVGDVQALARMLEAQARYYQFTWGRPMTTRAMANL----LSNILNENKWFPYMVQ 105
Query: 66 ILLAGY-DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
IL+ GY DK P L +D + L A G GS F++++++ + MS+EEA +L
Sbjct: 106 ILIGGYVDK---PELASVDALGGLVFEKYTATGSGSPFAIAIIEDGYREDMSIEEAKELA 162
Query: 125 DKCILEIRSRLVVAPPNFV-IKIVDKDGARE 154
+ + R V V + ++ KDG +E
Sbjct: 163 VRAVRTAGKRDVYTGERKVQVVVITKDGMKE 193
>gi|126179146|ref|YP_001047111.1| proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
gi|302595840|sp|A3CUS9.1|PSB_METMJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|125861940|gb|ABN57129.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanoculleus marisnigri
JR1]
Length = 214
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD Q +Q +L++ R G ++ AA+ L R PY V +L+
Sbjct: 54 LTTAGGVGDAQQLVRILQVECNLFEMRRGKTMSVGAASTLLSNYLNQN-RYYPYYVQLLM 112
Query: 69 AGYDKETGPSLYYIDYIATLHK-VDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G+D E GPS+Y +D + K D A G GS F+ +++ + +GM ++A DL +
Sbjct: 113 GGFDDE-GPSVYSVDAMGGATKEEDIVATGSGSPFAYGVLEDQYRAGMKEDDAKDLAVRA 171
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREY 155
+ R + + ++ ++ KD E+
Sbjct: 172 VRSAMRRDSASGEDIMVVVITKDKYEEH 199
>gi|239792329|dbj|BAH72518.1| ACYPI004276 [Acyrthosiphon pisum]
Length = 119
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
+ ++ ++ +GE GD +F E+I +NV LY+ RNG L+ A A FTR +A LR +SP
Sbjct: 38 ITNNVVMGVTGEAGDVPRFAEYITQNVKLYRMRNGYDLSIPAIATFTRKTVAEHLRSQSP 97
Query: 62 YMVNILLAGYD 72
Y VN +L GY+
Sbjct: 98 YQVNFMLGGYN 108
>gi|14591201|ref|NP_143277.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110.1|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H IA +G+ GD + ++ LY ++G ++ A A + + PY
Sbjct: 47 IDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLL-ANIMNGAKYFPY 105
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ L+ GYD++ P LY +D + + + A G G F+ S++D + +++EE +
Sbjct: 106 LAWFLVGGYDEK--PKLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIK 163
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
L K I R V + ++ + K+G +E + E
Sbjct: 164 LAVKAINTAIKRDVFSGDGILVVTITKEGYKELSDSE 200
>gi|443898466|dbj|GAC75801.1| peptidyl-prolyl cis-trans isomerase [Pseudozyma antarctica T-34]
Length = 144
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 44/64 (68%)
Query: 94 AAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
AA GYG++F++S +DR+ MS+EE + L+ +CI E++ R +V F ++++D+DGAR
Sbjct: 7 AAHGYGAFFAMSTLDRYHRPDMSLEEGLVLLRRCINELKQRFIVDLGQFTVRVIDRDGAR 66
Query: 154 EYAW 157
+
Sbjct: 67 THGC 70
>gi|341582772|ref|YP_004763264.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
gi|340810430|gb|AEK73587.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
Length = 200
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
I +G GD ++ YQF P+TT A AN L+ L ++ PY+V
Sbjct: 50 ITTAGSVGDVQALARMLEAEARYYQFTWNRPMTTRAMANL----LSNILNENKWFPYLVQ 105
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I++ GY E P+L +D + L D A G GS F++++++ F MSVEEA +L
Sbjct: 106 IIIGGYVDE--PTLANLDAMGGLVFDDYTATGSGSPFAIAVLEDGFKKDMSVEEAKELAV 163
Query: 126 KCILEIRSRLVVAPPNFV-IKIVDKDGARE 154
+ + R V V + ++ KDG +E
Sbjct: 164 RAVRTAGKRDVYTGDRKVQVVVITKDGMKE 193
>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
AL-21]
gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. AL-21]
Length = 210
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H +G D + +I V+LY+ RNG P++ AAAN T L A R PY
Sbjct: 46 IDDHIGATIAGSVSDAQKLMGYISAEVALYRLRNGAPMSVEAAANMTSNIL-HASRFYPY 104
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V LL G D E GP+L+ +D + K + G GS + +++ ++ M +EE
Sbjct: 105 YVQTLLGGVD-EKGPALFSLDPSGGVIKDLMISTGSGSPVAYGVLEDRYNQEMDIEEGTS 163
Query: 123 LVDKCI 128
+V + I
Sbjct: 164 VVIRAI 169
>gi|57642142|ref|YP_184620.1| proteasome subunit beta 2 [Thermococcus kodakarensis KOD1]
gi|74505318|sp|Q5JHL8.1|PSB2_PYRKO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|57160466|dbj|BAD86396.1| proteasome, beta subunit 2 [Thermococcus kodakarensis KOD1]
Length = 199
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
I +G GD ++ YQF G P+T A A+ L+ L ++ PYMV
Sbjct: 49 ITTAGSVGDVQALARMLEAEARYYQFTWGRPMTAKAMAHL----LSNILNENKWFPYMVQ 104
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I++ GY +E P+L +D + L D A G GS F++++++ F MS+EEA +L
Sbjct: 105 IIIGGYVEE--PTLANLDPLGGLIFDDYTATGSGSPFAIAVLEDGFRKDMSLEEAKELAV 162
Query: 126 KCILEIRSRLVVAPPNFV-IKIVDKDGARE 154
+ + R V V + ++ KDG +E
Sbjct: 163 RAVRTAGKRDVYTGDRKVQVVVISKDGMKE 192
>gi|240104109|ref|YP_002960418.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595730|sp|C5A2D5.1|PSB2_THEGJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|239911663|gb|ACS34554.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 200
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
I +G GD ++ YQF G P+TT A AN L+ L ++ PYMV
Sbjct: 50 ITTAGSVGDVQALARMLEAQARYYQFTWGRPMTTRAMANL----LSNILNENKWFPYMVQ 105
Query: 66 ILLAGY-DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
I++ GY DK P L +D + L A G GS F++++++ + MS+EEA +L
Sbjct: 106 IIIGGYVDK---PELASVDALGGLVFEKYTATGSGSPFAIAIIEDGYREDMSIEEAKELA 162
Query: 125 DKCILEIRSRLVVAPPNFV-IKIVDKDGARE 154
+ + R V V + ++ KDG +E
Sbjct: 163 VRAVKTAGKRDVYTGERKVQVVVITKDGMKE 193
>gi|198450366|ref|XP_002137083.1| GA26779 [Drosophila pseudoobscura pseudoobscura]
gi|198131005|gb|EDY67641.1| GA26779 [Drosophila pseudoobscura pseudoobscura]
Length = 208
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRKS- 60
L +IAA+G GD +F FI ++++L++ + NG + + A+F ++ +++ +
Sbjct: 38 LGDFAVIAAAGNGGDPQRFMSFIARHMALHRVQHNGQSPSVRSMAHFAGKQIYSSVNANL 97
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ V+ L+AG+D GP L+ ID L V + G G S+ + + + A
Sbjct: 98 NFKVSALIAGWDPRGGPQLHQIDEFGGLVSVPYSGQGLGLPVFNSIFQKDYSPDIDEPTA 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAW--RESVKDTPVSS 168
++ KC+ + R+V+ NF + +V ++G E +S+K P SS
Sbjct: 158 YHVLKKCVAAVHERVVLNMRNFEVFVVKENGITELEAINADSLKTAPPSS 207
>gi|307353377|ref|YP_003894428.1| proteasome endopeptidase complex subunit beta [Methanoplanus
petrolearius DSM 11571]
gi|307156610|gb|ADN35990.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
petrolearius DSM 11571]
Length = 209
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD Q ++Q SLY R G ++ A+A+ L R PY V +L+
Sbjct: 57 MTTAGGVGDAQQLARWVQVECSLYNIRRGREMSVGASASLLSNILNNN-RMMPYYVQLLV 115
Query: 69 AGYDKETGPSLYYIDYIATLHKVDK-AAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G D GPS+Y +D + D A G GS F+ +++ F GM ++ VDL +
Sbjct: 116 GGVDS-GGPSIYSVDALGGASPEDDIVATGSGSPFAYGVLEDRFEKGMPEKDCVDLAIRA 174
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREY 155
+ R + + + ++ KD E+
Sbjct: 175 LRSAMRRDSASGEDISVVVITKDKYEEF 202
>gi|409095355|ref|ZP_11215379.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 206
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNG----IPLTTAAAANFTRGELATALR 58
+D H IA +G GD + ++ LY+ R G + + T AN G R
Sbjct: 47 IDDHLAIAGAGLVGDILSMVRLLRAEARLYRARVGREMSVKVLTTLIANILHGG-----R 101
Query: 59 KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
Y L+ GYD E P LY ID + + A G G F+L++++ F G+S+E
Sbjct: 102 GYGYFAWFLVGGYDTE--PRLYSIDAAGGVTEEKYVAAGSGMEFALAILENEFSEGLSLE 159
Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ + L K + R V + +V K+G RE
Sbjct: 160 DGMRLAAKAVNAAIKRDVYTGEGITLVVVTKEGYRE 195
>gi|429965597|gb|ELA47594.1| hypothetical protein VCUG_00917 [Vavraia culicis 'floridensis']
Length = 193
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 16 GDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKET 75
G R FTE +V L +PL + A F + + + LR+ P ++ ++
Sbjct: 55 GLRNLFTE----SVKLQALDGQVPLCSQTTAFFVQNYIHSRLRQQPMESTFMIMDKNR-- 108
Query: 76 GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRL 135
SLY +D + + GY +F ++DR + M+ +EA+ L+ KC+ +++R
Sbjct: 109 --SLYSVDQYGAMSSSNYICMGYSRFFLYGLLDREYREDMTADEAIGLLQKCVDLMKNRF 166
Query: 136 VVAPPNFVIKIVDKDGAREYAWRESVK 162
++ +++KI + D R + SV
Sbjct: 167 LLNYQRYMVKIFENDQLRSVELKPSVN 193
>gi|315231929|ref|YP_004072365.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315184957|gb|ADT85142.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 181
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H +A +G GD + ++ LY+ R G ++ A A T + + PY
Sbjct: 20 IDEHLALAGAGNVGDILSLVRMLRAETKLYRARVGREMSVKALATLT-ANILNGTKYFPY 78
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
L+ GYD++ P+LY +D + + + G G F+ ++++ + MSV+E V
Sbjct: 79 FGWFLIGGYDEK--PNLYSVDMAGGMTEDKYVSAGSGMEFAYAVLENEYKEDMSVDEGVK 136
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
L K I R V ++ + K+G RE +E
Sbjct: 137 LAVKAINTAIKRDVFTGDGILVVKITKEGYRELDKKE 173
>gi|315230761|ref|YP_004071197.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315183789|gb|ADT83974.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 199
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
I +G GD ++ YQF G P+T A AN L+ L ++ PY+V
Sbjct: 49 ITTAGSVGDVQMLARMLEAEARYYQFTWGKPMTAKAMANL----LSNILNENKWFPYLVQ 104
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I++ GY +E P+L +D + L D A G GS F++++++ + MS+EEA +L
Sbjct: 105 IIIGGYVEE--PTLANLDPLGGLIFDDYTATGSGSPFAIAILEEGYRKDMSIEEARELAI 162
Query: 126 KCILEIRSRLV-VAPPNFVIKIVDKDGARE 154
+ + R V + ++ K+G +E
Sbjct: 163 RAVRTAGKRDVYTGDRKIQVVVITKEGMKE 192
>gi|15897221|ref|NP_341826.1| proteasome subunit [Sulfolobus solfataricus P2]
gi|284174466|ref|ZP_06388435.1| proteasome subunit [Sulfolobus solfataricus 98/2]
gi|384433733|ref|YP_005643091.1| proteasome endopeptidase complex subunit beta [Sulfolobus
solfataricus 98/2]
gi|74557429|sp|Q980L4.1|PSB1_SULSO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595697|sp|D0KRX1.1|PSB1_SULS9 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|13813418|gb|AAK40616.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261601887|gb|ACX91490.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
solfataricus 98/2]
Length = 196
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L+A +G GD T + + Y+ G P++ AAA + + P++ IL
Sbjct: 46 LMAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAAAKLLS-VILYQYKVMPFISEIL 104
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G D E GP LY +D I +L + + AA G G+ ++ +++ + MS++ A L+ K
Sbjct: 105 FGGVD-EKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITKA 163
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGARE 154
I R + + + I+DK G E
Sbjct: 164 IKASIERDITSGDGIDLAIIDKKGNYE 190
>gi|375082621|ref|ZP_09729674.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
gi|374742699|gb|EHR79084.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
Length = 199
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
I +G GD ++ YQF G P+T A AN L+ L +S PYMV
Sbjct: 49 ITTAGSVGDLQALARMLEAEARYYQFTWGKPMTAKAMANL----LSNILNESKWFPYMVQ 104
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I++ GY +E P+L +D + L + A G GS F++++++ + M++EEA +L
Sbjct: 105 IIIGGYVEE--PTLASLDPLGGLIFDNYTATGSGSPFAIAILEDGYKEDMTIEEARELAI 162
Query: 126 KCILEIRSRLV-VAPPNFVIKIVDKDGARE 154
+ + R V + + KDG +E
Sbjct: 163 RAVRTAGKRDVYTGERKIQVVTITKDGMKE 192
>gi|389860540|ref|YP_006362779.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525443|gb|AFK50641.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 206
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 31 LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHK 90
LY+ G +T + +N+ L+ LR P++V +LL G D+E GPSLYY+D ++ K
Sbjct: 71 LYELDYGRRITLRSLSNYMSLILSAYLRYVPFIVQLLLGGVDEE-GPSLYYLDLYGSISK 129
Query: 91 VDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSR---------LVVAPPN 141
A+ G GS + ++++ + MS+EEA L K + SR +VV PN
Sbjct: 130 EKYASTGSGSPVAYGVLEKEYRKDMSLEEAKHLAFKAVEAALSRDGFSGEGVDVVVIGPN 189
Query: 142 F 142
+
Sbjct: 190 Y 190
>gi|195165880|ref|XP_002023766.1| GL27233 [Drosophila persimilis]
gi|194105926|gb|EDW27969.1| GL27233 [Drosophila persimilis]
Length = 208
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRKS- 60
L +IAA+G GD +F I ++++L++ + NG + + A+F ++ +++ +
Sbjct: 38 LGDFAMIAAAGNGGDPQRFMSLIARHMALHRVQHNGQSPSVRSMAHFAGKQIYSSVNANL 97
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ V+ L+AG+D + GP L+ ID L V + G G S+ + + + A
Sbjct: 98 NFKVSALIAGWDPQAGPQLHQIDEFGGLVSVPYSGQGLGLPVFNSIFQKDYSPDIDEPTA 157
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAW--RESVKDTPVSS 168
++ KC+ + R+V+ NF + +V +G E +S+K P SS
Sbjct: 158 YHVLKKCVAAVHERVVLNMRNFEVFVVKANGITELEAINADSLKTAPPSS 207
>gi|57641364|ref|YP_183842.1| proteasome subunit beta [Thermococcus kodakarensis KOD1]
gi|74502448|sp|Q5JDJ9.1|PSB1_PYRKO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|57159688|dbj|BAD85618.1| proteasome, beta subunit [Thermococcus kodakarensis KOD1]
Length = 203
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 3/157 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H IA +G GD + ++ LY+ + ++ A A T L + R Y
Sbjct: 44 IDDHLAIAGAGTVGDILSLVRLLRAEAKLYRAKVSREMSVKALATLTSNILHSG-RGFAY 102
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
M L+ GYD + P LY ID + + A G G F+ S+++ ++ G+ +EE V
Sbjct: 103 MAWFLVGGYD--SAPRLYSIDAAGGVTEDRFTAAGSGMEFAFSVLEENYRDGIPLEEGVK 160
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
L + I R V + + ++G RE++ E
Sbjct: 161 LALRAIKAATKRDVFTGGGVTLVTITEEGYREWSEEE 197
>gi|195483341|ref|XP_002086944.1| GE14876 [Drosophila yakuba]
gi|194186685|gb|EDX00297.1| GE14876 [Drosophila yakuba]
Length = 1119
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 97 GYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYA 156
GY + F+ S+ DR++H +S EA D+ KCI EI+ RL+V+ NF + +VDKDG R++
Sbjct: 1047 GYCAIFASSIYDRYWHPNISQAEAYDVYKKCIAEIQKRLLVSLKNFTVAVVDKDGVRDFR 1106
Query: 157 WRESVK 162
+ K
Sbjct: 1107 SNQRCK 1112
>gi|337285369|ref|YP_004624843.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334901303|gb|AEH25571.1| proteasome, subunit beta [Pyrococcus yayanosii CH1]
Length = 197
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
I +G GD ++ YQF G P++T A AN L+ L ++ PY+V
Sbjct: 49 ITTAGSVGDVQMLARILEVEARYYQFTWGRPMSTRAMANL----LSNILNENKWFPYLVQ 104
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I++ GY +E P + +D + L D A G GS F++++++ + M +EEA +L
Sbjct: 105 IVIGGYVEE--PVIANLDPLGGLIFDDYTATGSGSPFAIAVLEDGYRKDMGIEEAKELAV 162
Query: 126 KCILEIRSRLVVAPPNFV-IKIVDKDGAREYAWRE 159
K + R V V + + K+G REY + E
Sbjct: 163 KAVKVAGKRDVYTGSRKVQVVTITKEGMREYWFEE 197
>gi|242398879|ref|YP_002994303.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
gi|302595703|sp|C6A2V9.1|PSB1_THESM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|242265272|gb|ACS89954.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
Length = 207
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H +A +G GD + ++ LY+ + G ++T A A T + + + PY
Sbjct: 46 VDDHLALAGAGAVGDILSLVRALRAESKLYRAKVGKEMSTKALATLTS-NILSGRKYLPY 104
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
L+ GYD++ PSLY ID + + + G G F+ S++D + +++ V
Sbjct: 105 FGWFLIGGYDEK--PSLYSIDMAGGITEDKYVSAGSGMEFAYSILDNEYSEKITLNNGVK 162
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
L K I R V ++ +D++G RE + E
Sbjct: 163 LAIKAINAAIKRDVFTGDGIMVVTIDREGYRELSKEE 199
>gi|390960707|ref|YP_006424541.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
gi|390519015|gb|AFL94747.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
Length = 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H +A +G GD + ++ LY+ R G ++ A A T L R PY
Sbjct: 44 IDDHLALAGAGSVGDILSLVRLLRAEAKLYRARVGKEMSVKALATLTSNVLHGN-RFMPY 102
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
L+AG+D++ P LY ID + + A G G F+ S+++ ++ M +E V
Sbjct: 103 FGWFLIAGHDEK--PGLYSIDMAGGVTEDKFTAAGSGMEFAFSILEENYREDMPLEGGVK 160
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYA 156
L + I R V + V ++G RE++
Sbjct: 161 LALRAIKAATRRDVFTGGGVTLVTVTREGYREWS 194
>gi|378725726|gb|EHY52185.1| proteasome component PRE3 [Exophiala dermatitidis NIH/UT8656]
Length = 233
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q ++ +Y N P TT AA + EL K I++AGY
Sbjct: 76 SGSAADTQAVADIVQYHLGIYGIMNNEPPTTQTAAALFQ-ELCYD-NKDQLSAGIIIAGY 133
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
DK G +Y I +LHK A G GS + D H+ GM+ EE VD V + E
Sbjct: 134 DKRNGGQVYSIPLGGSLHKGPYAIAGSGSTYIYGFCDAHWKEGMTEEEGVDFVKNALRE 192
>gi|157876794|ref|XP_001686739.1| putative proteasome beta 5 subunit [Leishmania major strain
Friedlin]
gi|68129814|emb|CAJ09120.1| putative proteasome beta 5 subunit [Leishmania major strain
Friedlin]
Length = 302
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
+ ++ + L +G D + + L++ RNG +T AAA+ + A R
Sbjct: 134 LEINDYLLGTLAGGAADCQYWERVLGMECRLWELRNGSRITVAAASKIL-ANITYAYRNH 192
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ +LAG+D E GPSLYY+D + K D + G GS ++ ++D + +SVE+A
Sbjct: 193 GLSMGTMLAGWD-EFGPSLYYVDDKGSRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDA 251
Query: 121 VDLVDKCILEIRSR 134
DL + I R
Sbjct: 252 CDLARRSIFHATYR 265
>gi|390961463|ref|YP_006425297.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
gi|390519771|gb|AFL95503.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
Length = 200
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
I +G GD ++ YQF P++T A AN L+ L ++ PY+V
Sbjct: 50 ITTAGSVGDVQALARMLEAEARYYQFTWNRPMSTKAMANL----LSNILNENKWFPYLVQ 105
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I++ GY +E P+L +D + L D A G GS F++++++ F MSV+EA +L
Sbjct: 106 IIIGGYVEE--PTLANLDPMGGLIFDDYTATGSGSPFAIAVLEDGFKKDMSVKEARELAI 163
Query: 126 KCILEIRSRLVVAPPNFV-IKIVDKDGARE 154
+ + R V V + ++ KDG +E
Sbjct: 164 RAVRTAGKRDVYTGSRKVQVVVITKDGMKE 193
>gi|195032037|ref|XP_001988429.1| GH11158 [Drosophila grimshawi]
gi|193904429|gb|EDW03296.1| GH11158 [Drosophila grimshawi]
Length = 397
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGY 71
G D +QF++FI ++ Y +NG PL T A +F+ + LR + + V +LL GY
Sbjct: 5 GNKSDTLQFSKFIASHIKCYDIQNGYPLNTPAIVHFSCNNVVANLRNRVKHQVALLLGGY 64
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D +TG L ID + ++ A +G G ++ + + + +EA +++
Sbjct: 65 DNDTGSLLSSIDAQGSSQTLNYAVYGMGYSVCNRILQKTWKPDLPFDEAHEII 117
>gi|409096228|ref|ZP_11216252.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 201
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
I +G GD ++ YQF G P+ T A AN L+ L ++ PYMV
Sbjct: 51 ITTAGSVGDVQALARMLEAEARYYQFTWGRPMKTRAMANL----LSNILNENKWFPYMVQ 106
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
IL+ GY E P L +D + L + A G GS F++++++ + MSVEEA +L
Sbjct: 107 ILIGGYVDE--PELASLDALGGLVFDEYTATGSGSPFAIAIIEDGYREDMSVEEAKELAV 164
Query: 126 KCILEIRSRLVVAPPNFV-IKIVDKDGARE 154
+ + R V V + + +DG +E
Sbjct: 165 RAVRTAGKRDVYTGDRKVQVVTITRDGMKE 194
>gi|145520279|ref|XP_001445995.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413472|emb|CAK78598.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + ++ + Y+ +NG L+ AAA+ F +G L R S
Sbjct: 55 INEYLLGTMAGGAADCQYWLAYLANHCRTYELKNGSKLSVAAASKFLQGIL-IGYRNSGL 113
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG D TG LYYID K D + G GS ++ ++D H+ +S+ EAV+
Sbjct: 114 SMGCMIAGTDT-TGQHLYYIDNDGMRLKGDIFSVGSGSTYAYGVLDNHYRYDLSLNEAVE 172
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
L + I R + + + KDG
Sbjct: 173 LGVRAIYHATHRDTASGGVVRVYHIHKDG 201
>gi|310800635|gb|EFQ35528.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 228
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIP-LTTAAAANFTRGELATALRKSPYMVNILLAG 70
SG D + +Q + +Y RNG P +T AAA F E+ A K +++AG
Sbjct: 75 SGSAADTQAVADIVQYQLGMYAMRNGKPPMTQTAAAIFQ--EVCYA-NKDRLTAGLIIAG 131
Query: 71 YDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
+D+ G +Y I +LHK A G GS + D H+ GM ++AVD V + E
Sbjct: 132 WDERHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDEHWREGMEEQDAVDFVKGSLKE 191
>gi|341581964|ref|YP_004762456.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
gi|340809622|gb|AEK72779.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
Length = 203
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H +A +G GD + ++ LY+ + G ++ A A T L + R PY
Sbjct: 44 IDDHLALAGAGSVGDILSLVRLLRAEAKLYRAKVGKEMSVKALATLTSNVLHGS-RFMPY 102
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
L+AG+ E P LY +D + + A G G F+ S+++ F M++EE V
Sbjct: 103 FGWFLIAGHTGE--PGLYSVDMAGGVTEDRFTAAGSGMEFAFSILEAEFKENMTLEEGVK 160
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
L + I R V + V +G +E++ E
Sbjct: 161 LALRAIKAATRRDVFTGGGVTLVTVTDEGYKEWSEEE 197
>gi|145484105|ref|XP_001428075.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395158|emb|CAK60677.1| unnamed protein product [Paramecium tetraurelia]
Length = 275
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + ++ + Y+ +NG L+ AAA+ F +G L R S
Sbjct: 94 INEYLLGTMAGGAADCQYWLAYLANHCRTYELKNGSKLSVAAASKFLQGIL-IGYRNSGL 152
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG D TG LYYID K D + G GS ++ ++D H+ +S+ EAV+
Sbjct: 153 SMGCMIAGTDT-TGQHLYYIDNDGMRLKGDIFSVGSGSTYAYGVLDNHYRYDLSLNEAVE 211
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
L + I R + + + KDG
Sbjct: 212 LGIRAIYHATHRDTASGGVVRVYHIHKDG 240
>gi|67476394|ref|XP_653800.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56470790|gb|EAL48414.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407042489|gb|EKE41354.1| proteasome subunit beta type 5 precursor, putative [Entamoeba
nuttalli P19]
gi|449706891|gb|EMD46648.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 252
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+ SH + +G D + + + L++ RN P++ AAA+ + R
Sbjct: 75 ITSHIIGTMAGGAADCAYWERELTRQCRLFELRNKPPISVAAASKML-ANILYQYRNYNL 133
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ GYDK TGP ++Y++ + G GS +++S++D + M E+A++
Sbjct: 134 SVGSMICGYDK-TGPHIFYVEDGGVRIPGHLFSVGSGSPYAVSLIDSEYDYNMPKEKAIE 192
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
L + I R V + N + +DKDG R
Sbjct: 193 LARRAIFHATHRDVASGGNVNVIFIDKDGWR 223
>gi|167540121|ref|XP_001741562.1| proteasome subunit beta type-5 precursor [Entamoeba dispar SAW760]
gi|165893870|gb|EDR21989.1| proteasome subunit beta type-5 precursor, putative [Entamoeba
dispar SAW760]
Length = 252
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+ SH + +G D + + + L++ RN P++ AAA+ + R
Sbjct: 75 ITSHIIGTMAGGAADCAYWERELTRQCRLFELRNKPPISVAAASKML-ANILYQYRNYNL 133
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ GYDK TGP ++Y++ + G GS +++S++D + M E+A++
Sbjct: 134 SVGSMICGYDK-TGPHIFYVEDGGVRIPGHLFSVGSGSPYAVSLIDSEYDYNMPKEKAIE 192
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
L + I R V + N + +DKDG R
Sbjct: 193 LARRAIFHATHRDVASGGNVNVIFIDKDGWR 223
>gi|212224577|ref|YP_002307813.1| proteasome subunit beta 2 [Thermococcus onnurineus NA1]
gi|302595811|sp|B6YXV3.1|PSB2_THEON RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|212009534|gb|ACJ16916.1| proteasome, beta subunit 2 [Thermococcus onnurineus NA1]
Length = 200
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
I +G GD ++ YQF G P++T A AN L + PY+V I+L
Sbjct: 50 ITTAGSVGDVQALARMLEAEARYYQFTWGKPMSTKAMANLLSNIL-NGNKWFPYLVQIIL 108
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
GY +E P+L +D + L D A G GS F++++++ + MS+EEA +L + +
Sbjct: 109 GGYVEE--PTLANLDPLGGLIFDDYTATGSGSPFAIAVLEDGYKKDMSIEEAKELAVRAV 166
>gi|380491934|emb|CCF34978.1| proteasome component PRE3 [Colletotrichum higginsianum]
Length = 228
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIP-LTTAAAANFTRGELATALRKSPYMVNILLAG 70
SG D + +Q + LY RNG P +T AAA F E+ A K +++AG
Sbjct: 75 SGSAADTQAVADIVQYQLGLYAMRNGKPPMTQTAAAIFQ--EVCYA-NKDRLTAGLIIAG 131
Query: 71 YDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
+D+ G +Y I +LHK A G GS + D H+ GM +EAV+ V + E
Sbjct: 132 WDERHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDEHWKEGMEEKEAVEFVKGSLKE 191
>gi|315139004|ref|NP_001186709.1| proteasome subunit beta type-2 isoform 3 [Homo sapiens]
gi|332248608|ref|XP_003273456.1| PREDICTED: proteasome subunit beta type-2 isoform 5 [Nomascus
leucogenys]
gi|426328919|ref|XP_004025494.1| PREDICTED: proteasome subunit beta type-2 isoform 5 [Gorilla
gorilla gorilla]
Length = 84
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 51/73 (69%)
Query: 82 IDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPN 141
+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ KC+ E++ R ++ P
Sbjct: 1 MDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPT 60
Query: 142 FVIKIVDKDGARE 154
F ++I+DK+G +
Sbjct: 61 FSVRIIDKNGIHD 73
>gi|227828116|ref|YP_002829896.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
M.14.25]
gi|227830823|ref|YP_002832603.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
gi|229579719|ref|YP_002838118.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229581613|ref|YP_002840012.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|229585355|ref|YP_002843857.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238620316|ref|YP_002915142.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284998338|ref|YP_003420106.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|385773795|ref|YP_005646362.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
gi|385776430|ref|YP_005648998.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|302595724|sp|D2PDG6.1|PSB2_SULID RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595743|sp|C3MZI0.1|PSB2_SULIA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595744|sp|C4KIR0.1|PSB2_SULIK RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595746|sp|C3NFX2.1|PSB1_SULIN RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595751|sp|C3MRE5.1|PSB2_SULIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595758|sp|C3MY41.1|PSB2_SULIM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595897|sp|C3N7K2.1|PSB2_SULIY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|227457271|gb|ACP35958.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459912|gb|ACP38598.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228010434|gb|ACP46196.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228012329|gb|ACP48090.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|228020405|gb|ACP55812.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238381386|gb|ACR42474.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284446234|gb|ADB87736.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|323475178|gb|ADX85784.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477910|gb|ADX83148.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 196
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L+A +G GD T + + Y+ G P++ AAA + + P++ IL
Sbjct: 46 LMAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLS-VILYQYKVMPFISEIL 104
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G D E GP LY +D I +L + + AA G G+ ++ +++ + M+++ A L+ K
Sbjct: 105 FGGVD-EKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKA 163
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGARE 154
I R + + + I+DK G E
Sbjct: 164 IKASIERDITSGDGIDLAIMDKKGNYE 190
>gi|126465836|ref|YP_001040945.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595723|sp|A3DN27.1|PSB2_STAMF RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126014659|gb|ABN70037.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 208
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 32 YQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKV 91
Y+ G P+ +A A+ L LR SPY+V +LL GYD + GP L+YID +L +
Sbjct: 75 YKLELGRPIKVSALASNLSIILNAYLRMSPYIVQLLLGGYD-DNGPHLFYIDLFGSLSEE 133
Query: 92 DKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSR---------LVVAPPN 141
A G GS + +++ + S +S++EA +L K + R +VV PN
Sbjct: 134 KYMATGSGSPTAFGVLEEEYRSDLSLDEAKELAFKAVSAATKRDGFSGEGVDIVVIGPN 192
>gi|170291074|ref|YP_001737890.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595814|sp|B1L6X8.1|PSB2_KORCO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170175154|gb|ACB08207.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 198
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
++ +G PGD + + ++ N+++Y+ N T A L Y +++
Sbjct: 46 VSTAGLPGDFQELVDVLKYNITMYELENEKAATPTNVAKLLSILLYQGRFSGIYYAELVV 105
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
G D +GP ++ +D L + + +A G G+ + +++R F GMS +EAV+L ++ +
Sbjct: 106 GGIDN-SGPKIFVLDPAGGLMEENFSAVGSGAQIATGILERFFKEGMSEKEAVELAERAM 164
Query: 129 LEIRSRLVVAPPNFVIKIVDKDGAR 153
E SR ++ + I+ G+R
Sbjct: 165 REAISRDALSGDGIDLLIITSKGSR 189
>gi|401420044|ref|XP_003874511.1| putative proteasome beta 5 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490747|emb|CBZ26011.1| putative proteasome beta 5 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 302
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
+ ++ + L +G D + + L++ RNG +T AAA+ + A R
Sbjct: 134 LEINDYLLGTLAGGAADCQYWERVLGMECRLWELRNGSRITVAAASKIL-ANITYAYRNH 192
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ +LAG+D+ GPSLYY+D + K D + G GS ++ ++D + +SVE+A
Sbjct: 193 GLSMGTMLAGWDR-FGPSLYYVDDKGSRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDA 251
Query: 121 VDLVDKCILEIRSR 134
DL + I R
Sbjct: 252 CDLARRSIFHATYR 265
>gi|374633938|ref|ZP_09706303.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373523726|gb|EHP68646.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 212
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGI-PLTTAAAANFTRGELATALRK 59
+ +D I +G D +QF KN+ Y + +G P+T A A + L+ + +
Sbjct: 53 LYIDERIGITTAGSVAD-LQFIYNYLKNIYHYNYISGNRPVTVKALATYLTNILSQS-KY 110
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PY+V IL+ GYD + P L+ +DY+ + + A G GS ++ +++ + M+ +E
Sbjct: 111 FPYLVQILIGGYDVQ--PRLFNLDYLGDMTEETYVATGSGSPVAMGVLEDGYRPSMTPDE 168
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
AV+L + +L R ++ + KDG +E
Sbjct: 169 AVELATRAVLSAIKRDSFTGTGVIVTKITKDGHQE 203
>gi|15920692|ref|NP_376361.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574726|sp|Q975D1.1|PSB2_SULTO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|15621475|dbj|BAB65470.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
Length = 207
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGI-PLTTAAAANFTRGELATALRKSPYMVNIL 67
I +G D +QF + KN+ Y G+ P+T A A + L+ + + PY+V IL
Sbjct: 56 ITTAGSVAD-LQFIYDLLKNIYHYNLITGMRPITIKALATYLANMLSFS-KYLPYIVQIL 113
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G D++ P LY +DY+ + + D A G GS ++ +++ + M+++EA DL +
Sbjct: 114 IGGVDEQ--PRLYNLDYVGDITEEDYTATGSGSVEAIGVIEDEYRPDMTLDEAADLARRA 171
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREYAW 157
I R ++ + K+G E +
Sbjct: 172 IFSSIKRDPYTGTGVIVSKITKNGHEEKEY 201
>gi|146104190|ref|XP_001469755.1| putative proteasome beta 5 subunit [Leishmania infantum JPCM5]
gi|398024254|ref|XP_003865288.1| proteasome beta 5 subunit, putative [Leishmania donovani]
gi|134074125|emb|CAM72867.1| putative proteasome beta 5 subunit [Leishmania infantum JPCM5]
gi|322503525|emb|CBZ38611.1| proteasome beta 5 subunit, putative [Leishmania donovani]
Length = 302
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
+ ++ + L +G D + + L++ RNG +T AAA+ + A R
Sbjct: 134 LEINDYLLGTLAGGAADCQYWERVLGMECRLWELRNGSRITVAAASKIL-ANITYAYRNH 192
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ +LAG+D + GPSLYY+D + K D + G GS ++ ++D + +SVE+A
Sbjct: 193 GLSMGTMLAGWD-QFGPSLYYVDDKGSRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDA 251
Query: 121 VDLVDKCILEIRSR 134
DL + I R
Sbjct: 252 CDLARRSIFHATYR 265
>gi|403293117|ref|XP_003937569.1| PREDICTED: proteasome subunit beta type-2 isoform 4 [Saimiri
boliviensis boliviensis]
Length = 84
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%)
Query: 82 IDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPN 141
+DY+A L K AA GYG++ +LS++DR++ +S E AV+L+ KC+ E++ R ++ P
Sbjct: 1 MDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPT 60
Query: 142 FVIKIVDKDGARE 154
F ++I+DK G +
Sbjct: 61 FSVRIIDKSGIHD 73
>gi|242399181|ref|YP_002994605.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
gi|302595734|sp|C6A3R1.1|PSB2_THESM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|242265574|gb|ACS90256.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
Length = 199
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
I +G GD ++ YQF G P+T A AN L+ L +S PYMV
Sbjct: 49 ITTAGSVGDLQALARMLEAEAKYYQFTWGKPMTAKAMANL----LSNILNESKWFPYMVQ 104
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I++ GY +E P+L +D + L + G GS F++++++ + MS+E+A +L
Sbjct: 105 IIIGGYVEE--PTLASLDPLGGLIFDNYTTTGSGSPFAIAILEDGYKEDMSIEDARELAI 162
Query: 126 KCILEIRSRLV-VAPPNFVIKIVDKDGARE 154
K + R V + + K+G +E
Sbjct: 163 KAVRTAGKRDVYTGERKIQVITITKEGMKE 192
>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|17380268|sp|Q9V0N9.1|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380741512|tpe|CCE70146.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 207
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H IA +G+ GD + ++ LY ++G ++ A A L A R PY
Sbjct: 47 IDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGA-RMLPY 105
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ L+ G+D++ P LY +D + + + A G G F+ S++D + + V E +
Sbjct: 106 LAWFLVGGFDEK--PRLYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIK 163
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ + I R V + ++ + ++G RE
Sbjct: 164 IAVEAINSAIKRDVFSGDGIMVVTITEEGYRE 195
>gi|14520445|ref|NP_125920.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|74558522|sp|Q9V247.1|PSB1_PYRAB RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|5457660|emb|CAB49151.1| psmB proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380740969|tpe|CCE69603.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 197
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
I +G GD ++ YQF G P+TT A AN L+ L ++ PY+V
Sbjct: 49 ITTAGSVGDVQMIARILEAEARYYQFTWGRPMTTRAMANL----LSNILNENKWFPYLVQ 104
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I++ GY E P++ +D + L D A G G+ F++++++ + + +E+A +L
Sbjct: 105 IIIGGYVDE--PTIANLDPLGGLIFDDYTATGSGTPFAIAILEEGYRKNLGIEKAKELAI 162
Query: 126 KCILEIRSRLV-VAPPNFVIKIVDKDGARE 154
K + +R V + + KDG +E
Sbjct: 163 KAVKAAGARDVYTGSKKIQVVTITKDGMKE 192
>gi|297527490|ref|YP_003669514.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256406|gb|ADI32615.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 210
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 32 YQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKV 91
Y+ G P+ + A+ L T LR SPY+V +LL GYD GP L+Y+D +L +
Sbjct: 77 YKLELGRPIKVSGLASNLSIILNTYLRASPYIVQLLLGGYD-NNGPHLFYMDLYGSLSEE 135
Query: 92 DKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
A G GS + +++ + S +S+EEA +L K +
Sbjct: 136 KYMATGSGSPTAFGVLEEGYRSDLSLEEAKELAFKAV 172
>gi|124028413|ref|YP_001013733.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
gi|302595715|sp|A2BN27.1|PSB2_HYPBU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|123979107|gb|ABM81388.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
Length = 212
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G D E++ + Y+ N ++ AAA + L +A + PY+V +LL
Sbjct: 58 MTTAGLVADAQMLAEWLANHTHYYEIVNKRRMSIHAAAQYLSIILHSA-KFYPYIVQLLL 116
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
GYD T P LY ID+ ++ + A G GS ++ +++ + +S+EEAV+L + +
Sbjct: 117 GGYD--TQPRLYNIDWFGSVTEEKYVATGSGSPTAIGVIEDQYSPNLSMEEAVELAKRAV 174
Query: 129 LEIRSRLVVAPPNFVIKIVDKDGAREYAW 157
R + ++ KD REY++
Sbjct: 175 ASSIRRDTFTGNGVDVVVIGKDFYREYSF 203
>gi|326492526|dbj|BAK02046.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 237
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G PLT + A F GE
Sbjct: 68 MEIDEHVGCAMSGLIADARTLVEHARVETQNHRFSYGEPLTVESTTQAICDLALRFGEGE 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
++++EA + + IL+ V P N I V
Sbjct: 185 KELALQEA-ETIALSILKQVMEEKVTPTNVDIAKV 218
>gi|15220961|ref|NP_175788.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
gi|145325425|ref|NP_001077717.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
gi|297853172|ref|XP_002894467.1| hypothetical protein ARALYDRAFT_474517 [Arabidopsis lyrata subsp.
lyrata]
gi|12229903|sp|O81149.1|PSA5A_ARATH RecName: Full=Proteasome subunit alpha type-5-A; AltName: Full=20S
proteasome alpha subunit E-1
gi|6056394|gb|AAF02858.1|AC009324_7 20S proteasome subunit PAE1 [Arabidopsis thaliana]
gi|3421087|gb|AAC32060.1| 20S proteasome subunit PAE1 [Arabidopsis thaliana]
gi|18252873|gb|AAL62363.1| 20S proteasome subunit PAE1 [Arabidopsis thaliana]
gi|21387063|gb|AAM47935.1| 20S proteasome subunit PAE1 [Arabidopsis thaliana]
gi|21554176|gb|AAM63255.1| Proteasome subunit alpha type 5-1 (20S proteasome alpha subunit E1)
[Arabidopsis thaliana]
gi|297340309|gb|EFH70726.1| hypothetical protein ARALYDRAFT_474517 [Arabidopsis lyrata subsp.
lyrata]
gi|332194888|gb|AEE33009.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
gi|332194889|gb|AEE33010.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
Length = 237
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F GE
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
+S++EA + + IL+ V P N I V
Sbjct: 185 KDLSLQEA-ETIAVSILKQVMEEKVTPNNVDIAKV 218
>gi|212223310|ref|YP_002306546.1| proteasome subunit beta [Thermococcus onnurineus NA1]
gi|302595732|sp|B6YSW2.1|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
Length = 203
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H +A +G GD + ++ V LY+ + G ++ A A T L + R PY
Sbjct: 44 IDDHLALAGAGSVGDILSLVRLLRAEVKLYRAKVGREISVKALATLTSNILHGS-RFMPY 102
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
L+AGYD++ P+LY +D + + A G G + ++++ + ++VEE V
Sbjct: 103 FGWFLIAGYDEK--PALYSLDMAGGVTEDKFTAAGSGMELAFAVLEDGYKDDINVEEGVK 160
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
L K I R V + V ++G RE E
Sbjct: 161 LALKAIKIATRRDVFTGDGITLVTVTEEGYRELNREE 197
>gi|169806435|ref|XP_001827962.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
gi|161779102|gb|EDQ31127.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
Length = 193
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 7 KLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVN 65
LI SG GD + +I+++ ++ I +T N + ++ LR ++PY
Sbjct: 40 NLIHLSGHQGDTYRLKLWIEESALWFENTYKIEITPKILLNDFQTKIYNQLRTRNPYQAQ 99
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
+ G E+ L Y+D + L + A YG YF + D +++ MS EE+++ ++
Sbjct: 100 GIFIGVQNESF-YLGYVDNYSALSEPQFVATQYGIYFLYGLYDNYYNFNMSHEESINFIN 158
Query: 126 KCILEIRSRLVVAPPNFVIKIVD 148
CI ++ RL++ N+ + ++D
Sbjct: 159 LCIKALKDRLILNTSNWRLDVLD 181
>gi|430812678|emb|CCJ29922.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 269
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
Query: 10 AASGEPGDRVQFTEF----IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVN 65
AA + G ++ EF ++ LY+ R+ ++ AAA+ + + + +
Sbjct: 98 AADCQVGLQLSAVEFWETVLRMECRLYELRHKTRISVAAASKIL-ANIVYSYKGMGLSMG 156
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
++ G+D+ GPSL+Y+D T K + G G F+ S++D + MSVE+A++L
Sbjct: 157 TMICGWDERRGPSLFYVDSEGTRLKGNMFCVGSGQTFAYSIVDDKYSWDMSVEDAIELGK 216
Query: 126 KCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ IL R + N I + +G R
Sbjct: 217 RAILAATHRDAFSGGNVNIYHIRSEGWR 244
>gi|448540830|ref|ZP_21623751.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|448549222|ref|ZP_21627911.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|448555580|ref|ZP_21631620.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
gi|445708983|gb|ELZ60818.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|445713285|gb|ELZ65063.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|445718325|gb|ELZ70028.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
Length = 243
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 25 IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYDKETGPSLYYID 83
++ V LY+ R G ++ A + + LR Y+V +L G D ETGP +Y ID
Sbjct: 108 LRAEVRLYEARRGEDMSMQALSTL----VGNFLRSGGFYVVQPILGGVD-ETGPHIYSID 162
Query: 84 YIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
++ + + G GS ++L ++++ F G+S+EEA + K I R + +
Sbjct: 163 PAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVERDLASGNGIN 222
Query: 144 IKIVDKDG 151
I +V +DG
Sbjct: 223 IAVVTEDG 230
>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|433422417|ref|ZP_20405977.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|448289696|ref|ZP_21480860.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|448570967|ref|ZP_21639478.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|448595863|ref|ZP_21653310.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
gi|306755975|sp|D4GYZ1.1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
gi|432198645|gb|ELK54905.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|445581429|gb|ELY35787.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|445722885|gb|ELZ74536.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|445742317|gb|ELZ93812.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
Length = 243
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 25 IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYDKETGPSLYYID 83
++ V LY+ R G ++ A + + LR Y+V +L G D ETGP +Y ID
Sbjct: 108 LRAEVRLYEARRGEDMSMQALSTL----VGNFLRSGGFYVVQPILGGVD-ETGPHIYSID 162
Query: 84 YIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
++ + + G GS ++L ++++ F G+S+EEA + K I R + +
Sbjct: 163 PAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVERDLASGNGIN 222
Query: 144 IKIVDKDG 151
I +V +DG
Sbjct: 223 IAVVTEDG 230
>gi|448562307|ref|ZP_21635346.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
gi|445719511|gb|ELZ71191.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
Length = 243
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 25 IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYDKETGPSLYYID 83
++ V LY+ R G ++ A + + LR Y+V +L G D ETGP +Y ID
Sbjct: 108 LRAEVRLYEARRGEDMSMQALSTL----VGNFLRSGGFYVVQPILGGVD-ETGPHIYSID 162
Query: 84 YIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
++ + + G GS ++L ++++ F G+S+EEA + K I R + +
Sbjct: 163 PAGSILEEEYTVTGSGSQYALGVLEQEFKDGLSIEEAKQVATKAIRSAVERDLASGNGIN 222
Query: 144 IKIVDKDG 151
I +V +DG
Sbjct: 223 IAVVTEDG 230
>gi|47210559|emb|CAF96424.1| unnamed protein product [Tetraodon nigroviridis]
Length = 224
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+ SH + SG D V + + + + LYQ R+G L+T AA + + +
Sbjct: 69 IHSHLVGTTSGTSADCVLWKRILARELRLYQLRHGRRLSTRGAAKLL-SHMLHPFKGTDL 127
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V L G+D +GPSL+Y+ T + G GS ++ S++D+ +SVEEA
Sbjct: 128 CVAATLCGWDGFSGPSLHYVCSDGTRLPGTLFSVGSGSPYAYSILDQGVEWNLSVEEATS 187
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+ + + R + N I ++ G
Sbjct: 188 VAREAVFRATHRDAYSGNNVDIYLISSKG 216
>gi|325967588|ref|YP_004243780.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323706791|gb|ADY00278.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 205
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 58 RKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSV 117
R PY V +L+ G D E GP L+ +D + +L + D AA G G+ ++++++ ++ GMS+
Sbjct: 100 RILPYFVEVLVGGIDDE-GPHLFIMDALGSLIEDDYAAVGTGTKLAIAILESNYKPGMSI 158
Query: 118 EEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+EA DL K I + SR V+ I + +G+ E
Sbjct: 159 KEARDLAIKAINQSISRDPVSGDGIDILTITGNGSTE 195
>gi|332796202|ref|YP_004457702.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
gi|332693937|gb|AEE93404.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
Length = 209
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGI-PLTTAAAANFTRGELATALRKS---PYMV 64
I +G D +QF ++ KN+ Y + +G P T A A + LA L ++ PY+V
Sbjct: 54 ITTAGSVAD-LQFLYYVLKNLYHYNYISGNRPTTVKALATY----LANTLSQNKYFPYLV 108
Query: 65 NILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
IL+ GYD T P LY +DY + + A G GS ++ +++ + ++ ++A+D+
Sbjct: 109 QILIGGYD--TQPRLYNLDYFGDMTEEKYVATGSGSPVAMGVLEDEYREDLTADQAMDIA 166
Query: 125 DKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ +L R ++ + K G E
Sbjct: 167 ARAVLSAIKRDSYTGTGVIVSKITKTGHVE 196
>gi|357152570|ref|XP_003576163.1| PREDICTED: proteasome subunit alpha type-5-like [Brachypodium
distachyon]
Length = 237
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F GE
Sbjct: 68 MEIDEHVGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGE 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184
Query: 113 SGMSVEEA 120
++++EA
Sbjct: 185 KELTLQEA 192
>gi|408382617|ref|ZP_11180160.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
gi|407814693|gb|EKF85317.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
Length = 208
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H +G D ++I+ V+L++ RNG + AAA T L ++ R P+
Sbjct: 46 IDDHIGTTIAGAVSDAQSLMKYIRAEVALFRLRNGKRINVEAAATLTSNILHSS-RGYPF 104
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V LL G D + GP+LY +D + K + G GS + +++ + + VEE +D
Sbjct: 105 YVQTLLGGVD-DKGPALYSLDPTGGVIKDLVISTGSGSPVAYGVLEDRYSQDLYVEEGID 163
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+ + I R + + ++ + ++G + + E
Sbjct: 164 VAIRAIKSAMERDTYSGNSILVATITEEGFKRLSEEE 200
>gi|336477060|ref|YP_004616201.1| proteasome endopeptidase complex subunit beta [Methanosalsum
zhilinae DSM 4017]
gi|335930441|gb|AEH60982.1| proteasome endopeptidase complex, beta subunit [Methanosalsum
zhilinae DSM 4017]
Length = 210
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD Q I LY+ R +T L + R P MV +L+
Sbjct: 52 LTTAGSVGDAQQIVRLISVESRLYKMRRQETMTIKGITTLLS-NLLSGQRYYPLMVQLLI 110
Query: 69 AGYDKETGPSLYYIDYIA-TLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDL 123
G DK+ GP+LY +D + + + + A G GS + +++ +H+ MS+EE DL
Sbjct: 111 GGVDKK-GPNLYSLDALGGMIEETNAVATGSGSPIAYGVLEDRYHTDMSIEEGADL 165
>gi|408404082|ref|YP_006862065.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364678|gb|AFU58408.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 219
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H + +G D + ++ N +LY+F+N + +AA L R PY
Sbjct: 56 VDQHLAMTIAGGVADAQNLVDTMRYNANLYRFQNKELMPVKSAARLCSNILFNQ-RYFPY 114
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V I++AGY K G ++ ID ++ + G GS + ++ + GMSV +A
Sbjct: 115 YVQIIMAGYTKNEGSQIHNIDLFGSMTTEKFISTGSGSPVAYGYLESEYRDGMSVNDAYK 174
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+ + I R + + I+DK+G RE + E
Sbjct: 175 VAMQAIAAAIRRNAGTGDSINVVIIDKNGYRELSKEE 211
>gi|168024139|ref|XP_001764594.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684172|gb|EDQ70576.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAA----AANFTRGE 52
M +D H A SG D E + ++F P+ TT A A F G+
Sbjct: 68 MEIDEHIGCAMSGLTADARTLVEHGRVETQNHRFSYNEPMSVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E+GP LY+ D T + D A G GS + + + HF+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ESGPCLYHTDPSGTFWQCDAKAIGSGSEGADTSLQEHFN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDK 149
M++EEA L + ++ V + + K+ K
Sbjct: 185 KNMTLEEAETLALSTLKQVMEEKVTSCNVDIAKVAPK 221
>gi|16943777|emb|CAD10778.1| 20S proteasome subunit alpha V [Physcomitrella patens]
Length = 237
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 7/129 (5%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAAAANFTR--GELA 54
M +D H A SG D E + ++F P+ TT A + GE
Sbjct: 68 MEIDEHIGCAMSGLTADARTLVEHGRVETQNHRFSYNEPMSVESTTQALCDLALRFGEFD 127
Query: 55 TALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSG 114
P+ V++L+AG+D E+GP LY+ D T + D A G GS + + + HF+
Sbjct: 128 EESMSRPFGVSLLIAGHD-ESGPCLYHTDPSGTFWQCDAKAIGSGSEGADTSLQEHFNKN 186
Query: 115 MSVEEAVDL 123
M++EEA L
Sbjct: 187 MTLEEAETL 195
>gi|255088810|ref|XP_002506327.1| predicted protein [Micromonas sp. RCC299]
gi|226521599|gb|ACO67585.1| predicted protein [Micromonas sp. RCC299]
Length = 82
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAAN 47
LDSHKL+A SG GD V F E+IQ N+ LY+ RNG+ L+T AA++
Sbjct: 38 LDSHKLMAMSGPKGDCVYFGEYIQANMKLYELRNGMKLSTHAASS 82
>gi|15231824|ref|NP_188046.1| proteasome subunit alpha type-5-B [Arabidopsis thaliana]
gi|18206373|sp|Q42134.2|PSA5B_ARATH RecName: Full=Proteasome subunit alpha type-5-B; AltName: Full=20S
proteasome alpha subunit E-2; AltName: Full=Proteasome
component Z
gi|13877965|gb|AAK44060.1|AF370245_1 putative 20S proteasome subunit PAE2 [Arabidopsis thaliana]
gi|3421090|gb|AAC32061.1| 20S proteasome subunit PAE2 [Arabidopsis thaliana]
gi|9279577|dbj|BAB01035.1| 20S proteasome subunit PAE-like protein [Arabidopsis thaliana]
gi|17065644|gb|AAL33816.1| putative 20S proteasome subunit PAE2 [Arabidopsis thaliana]
gi|332641977|gb|AEE75498.1| proteasome subunit alpha type-5-B [Arabidopsis thaliana]
Length = 237
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F GE
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
++++EA + + ++ V PN V
Sbjct: 185 KDITLQEAETIAVSILKQVMEEKVT--PNNV 213
>gi|18976531|ref|NP_577888.1| multicatalytic endopeptidase complex beta subunit [Pyrococcus
furiosus DSM 3638]
gi|397652128|ref|YP_006492709.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|74552258|sp|Q8U4C9.1|PSB1_PYRFU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18892084|gb|AAL80283.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|393189719|gb|AFN04417.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 196
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
I +G GD +++ Y F G P+TT A AN L R PY+V I++
Sbjct: 49 ITTAGSVGDVQMLARYLEAEARYYYFTWGRPMTTKAMANLLSNILNEN-RWFPYLVQIII 107
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
GY E P++ +D L D A G G+ F++++++ + +++EEA +L + +
Sbjct: 108 GGYVDE--PTIANLDPFGGLIFDDYTATGSGTPFAIAVLEEGYREDLTIEEAKELAIRAV 165
Query: 129 LEIRSRLVVAPPNFV-IKIVDKDGARE 154
R V V + + KDG +E
Sbjct: 166 RAAGRRDVYTGSKKVQVVTITKDGMKE 192
>gi|402467312|gb|EJW02630.1| hypothetical protein EDEG_02972 [Edhazardia aedis USNM 41457]
Length = 207
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
+I+ G+ + + EFI + R+ I +N + + LRK V +
Sbjct: 55 VISYFGDQSEGYRLCEFISELAIYESTRHNIKTDPKLVSNLMQKRIHDFLRKRNLGVGCI 114
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G + G LYY+D + + GY +YF ++D++++ M+ E+A+ +V
Sbjct: 115 VCG-KADNGFDLYYVDPYGAMATGNYFCAGYSTYFGYGVLDKNYNFDMTKEDAIKIVKNI 173
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ + RLV+ F IKI+ +G +
Sbjct: 174 VECMNKRLVLGYKKFNIKIISDEGTED 200
>gi|429861989|gb|ELA36651.1| proteasome component [Colletotrichum gloeosporioides Nara gc5]
Length = 228
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIP-LTTAAAANFTRGELATALRKSPYMVNILLAG 70
SG D + +Q + LY RNG P +T A A F E+ A K +++AG
Sbjct: 75 SGSAADTQAVADIVQYQLGLYAMRNGKPPMTQTAGAIFQ--EICYA-NKDRLTAGLIIAG 131
Query: 71 YDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
+D+ G +Y I +LHK A G GS + D ++ GM ++AVD V + E
Sbjct: 132 WDERHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMEEKDAVDFVKGALQE 191
>gi|86279680|gb|ABC94495.1| hypothetical protein [Ictalurus punctatus]
Length = 48
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 33 QFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSL 79
+ RNG L+ AAAANFTR LA LR ++PY VN+LLAGYD+ GP+L
Sbjct: 1 KMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDETDGPAL 48
>gi|154345734|ref|XP_001568804.1| putative proteasome beta 5 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066146|emb|CAM43936.1| putative proteasome beta 5 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 302
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
+ ++ + L +G D + + L++ RNG ++ AAA+ + A R
Sbjct: 134 LEINDYLLGTLAGGAADCQYWERVLGMECRLWELRNGSRISVAAASKIL-ANITYAYRNH 192
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++AG+D + GPSLYY+D + K D + G GS ++ ++D + +SVE+A
Sbjct: 193 GLSMGTMVAGWD-QFGPSLYYVDDKGSRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDA 251
Query: 121 VDLVDKCILEIRSR 134
DL + I R
Sbjct: 252 CDLARRSIFHATYR 265
>gi|448603032|ref|ZP_21656853.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|448624647|ref|ZP_21670595.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
gi|445746228|gb|ELZ97690.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|445749852|gb|EMA01294.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
Length = 243
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 25 IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYDKETGPSLYYID 83
++ V LY+ R G ++ A + + LR Y+V +L G D ETGP +Y ID
Sbjct: 108 LRAEVRLYEARRGEDMSMQALSTL----VGNFLRSGGFYVVQPILGGVD-ETGPHIYSID 162
Query: 84 YIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
++ + + G GS ++L ++++ F G+S++EA + K I R + +
Sbjct: 163 PAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIDEAKQVATKAIRSAVERDLASGNGIN 222
Query: 144 IKIVDKDG 151
I +V +DG
Sbjct: 223 IAVVTEDG 230
>gi|332159619|ref|YP_004424898.1| proteasome beta subunit [Pyrococcus sp. NA2]
gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
Length = 204
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H IA +G+ GD + ++ LY + G ++ A A + + PY
Sbjct: 44 IDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQFGREMSARALATLL-ANILNGYKYFPY 102
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
M L+ GYD++ LY +D + + + A G G F+ S++D + ++V+E V
Sbjct: 103 MAWFLVGGYDEK--ARLYSVDAVGGITEDKYMAAGSGMEFAYSILDAEYSDDITVKEGVK 160
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L K I R V + ++ + K+G E
Sbjct: 161 LAVKAINTAIKRDVFSGDGILVVTITKEGYSE 192
>gi|320101460|ref|YP_004177052.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753812|gb|ADV65570.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 208
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 19 VQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPS 78
V++ F+ ++ Y+ G P++ A A+ L+ LR P++V +LL G D TG S
Sbjct: 63 VEYARFLARD---YEAETGKPISVGALASRISLVLSVYLRYVPFIVQLLLGGRD-HTGAS 118
Query: 79 LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
LYY+D ++ + A G GS + ++++ + S +S+EEA L K +
Sbjct: 119 LYYMDLYGSVTREKYMATGSGSPVAFGVLEQGYRSDLSLEEAKALAFKAV 168
>gi|448585472|ref|ZP_21647865.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
gi|445726172|gb|ELZ77789.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
Length = 243
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 25 IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYDKETGPSLYYID 83
++ V LY+ R G ++ A + + LR Y+V +L G D ETGP +Y ID
Sbjct: 108 LRAEVRLYEARRGEDMSMQALSTL----VGNFLRSGGFYVVQPILGGVD-ETGPHIYSID 162
Query: 84 YIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
++ + + G GS ++L ++++ F G+S++EA + K I R + +
Sbjct: 163 PAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIDEAKQVATKAIRSAVERDLASGNGIN 222
Query: 144 IKIVDKDG 151
I +V +DG
Sbjct: 223 IAVVTEDG 230
>gi|328849031|gb|EGF98220.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 296
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D + ++ L++ RN ++ AAA+ L + + + ++ G+
Sbjct: 123 AGGAADCQYWETYLGMQCRLHELRNKSRISVAAASKHLS-NLVYSYKGMGLSMGTMICGW 181
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
DK +GP+LYY+D T K D + G GS F+ ++D+ +H + VEEA++L + I
Sbjct: 182 DK-SGPALYYVDSDGTRLKGDCFSVGSGSTFAYGVLDQGYHWDLEVEEALELGRRSIYAA 240
Query: 132 RSRLVVAPPNFVIKIVDKDG 151
R + + V +DG
Sbjct: 241 GHRDAFSGNTLNLYHVKEDG 260
>gi|403413320|emb|CCM00020.1| predicted protein [Fibroporia radiculosa]
Length = 302
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + F+ L++ RN ++ AAA+ F L + +
Sbjct: 117 INPYLLGTMAGGAADCQYWETFLGIECRLHELRNRERISVAAASKFLS-NLVYSYKGMGL 175
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK TGP+++Y+D T K D + G GS F+ ++D+ +H ++ EEA++
Sbjct: 176 SMGTMICGWDK-TGPTIFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYHWDLTDEEALE 234
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
L + I R + + V +DG +
Sbjct: 235 LGRRSIYAAGHRDAFSGNTINLYHVQEDGWK 265
>gi|297742930|emb|CBI35797.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 124 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 183
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + F+
Sbjct: 184 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 240
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
++++EA + + IL+ V P N I V
Sbjct: 241 QDLTLQEA-ETIALSILKQVMEEKVTPNNVDIAKV 274
>gi|428169158|gb|EKX38095.1| 20S proteasome subunit beta type 5 [Guillardia theta CCMP2712]
Length = 290
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D + + + + LY+ RN +TTAAA+ + + + + ++AG+
Sbjct: 122 AGGAADCMFWERHLGRLCRLYELRNKERITTAAASKLLH-NIMYSYKGYGLSMGTMIAGW 180
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
DK+ GP+LYY D T K K + G GS ++ ++D + MS+++A +L + I
Sbjct: 181 DKDIGPNLYYCDSEGTRVKGQKFSVGSGSPYAYGVLDEGYKFDMSIDDACELGRRAIYHA 240
Query: 132 RSRLVVAPPNFVIKIVDKDG 151
R ++ + V ++G
Sbjct: 241 TFRDAMSGGRVSVYHVHENG 260
>gi|18314179|ref|NP_560846.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74561745|sp|Q8ZST5.1|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 203
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 14/163 (8%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAAN------FTRGELAT 55
V+D IA++G D + ++ N Y+ +T + A F+R
Sbjct: 44 VIDDKLAIASAGIIADMQTLAKILKLNAKAYELEMKRKPSTHSMARLLSVIMFSR----- 98
Query: 56 ALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGM 115
R P+ +L+ G D+E GP L +D + +L + + AA G G+ +++++D + +
Sbjct: 99 --RFMPFFAEVLVGGIDEE-GPHLIVMDPLGSLIEDNYAALGTGAKLAVAVLDTGYRPDI 155
Query: 116 SVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWR 158
+VEEA L + + R V+ + IVDK+GARE R
Sbjct: 156 TVEEAKKLAVQALKAAIERDPVSGGGIDLAIVDKNGAREEEVR 198
>gi|323336919|gb|EGA78176.1| Pre3p [Saccharomyces cerevisiae Vin13]
Length = 187
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q ++ LY + G P T AA+ F EL K I++AGY
Sbjct: 43 SGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFK--ELCYE-NKDNLTAGIIVAGY 99
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D + +Y I ++HK+ A G GS F D++F MS EE VD +
Sbjct: 100 DDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFI 152
>gi|323347907|gb|EGA82167.1| Pre3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 187
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q ++ LY + G P T AA+ F EL K I++AGY
Sbjct: 43 SGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFK--ELCYE-NKDNLTAGIIVAGY 99
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D + +Y I ++HK+ A G GS F D++F MS EE VD +
Sbjct: 100 DDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFI 152
>gi|225441985|ref|XP_002265563.1| PREDICTED: proteasome subunit alpha type-5 isoform 1 [Vitis
vinifera]
gi|359482854|ref|XP_003632854.1| PREDICTED: proteasome subunit alpha type-5 [Vitis vinifera]
gi|147791356|emb|CAN66160.1| hypothetical protein VITISV_007438 [Vitis vinifera]
Length = 237
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
++++EA + + IL+ V P N I V
Sbjct: 185 QDLTLQEA-ETIALSILKQVMEEKVTPNNVDIAKV 218
>gi|3114276|pdb|1RYP|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114290|pdb|1RYP|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
Length = 205
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q ++ LY + G P T AA+ F EL K I++AGY
Sbjct: 55 SGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFK--ELCYE-NKDNLTAGIIVAGY 111
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D + +Y I ++HK+ A G GS F D++F MS EE VD +
Sbjct: 112 DDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFI 164
>gi|298508229|pdb|1VSY|H Chain H, Proteasome Activator Complex
gi|298508243|pdb|1VSY|V Chain V, Proteasome Activator Complex
gi|298508445|pdb|3L5Q|B Chain B, Proteasome Activator Complex
gi|298508459|pdb|3L5Q|D Chain D, Proteasome Activator Complex
Length = 196
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q ++ LY + G P T AA+ F EL K I++AGY
Sbjct: 46 SGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFK--ELCYE-NKDNLTAGIIVAGY 102
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D + +Y I ++HK+ A G GS F D++F MS EE VD +
Sbjct: 103 DDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFI 155
>gi|6322459|ref|NP_012533.1| Pre3p [Saccharomyces cerevisiae S288c]
gi|1172606|sp|P38624.2|PSB1_YEAST RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit PRE3; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE3;
AltName: Full=Proteasome component PRE3; AltName:
Full=Proteinase YSCE subunit PRE3; Flags: Precursor
gi|323462949|pdb|3NZJ|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462963|pdb|3NZJ|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462977|pdb|3NZW|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462991|pdb|3NZW|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463005|pdb|3NZX|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463019|pdb|3NZX|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|403071954|pdb|4B4T|1 Chain 1, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|2131077|emb|CAA89290.1| PRE3 [Saccharomyces cerevisiae]
gi|151945075|gb|EDN63326.1| 20S proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|190409486|gb|EDV12751.1| 20S proteasome subunit [Saccharomyces cerevisiae RM11-1a]
gi|285812892|tpg|DAA08790.1| TPA: Pre3p [Saccharomyces cerevisiae S288c]
gi|290771204|emb|CBK33732.1| Pre3p [Saccharomyces cerevisiae EC1118]
gi|349579189|dbj|GAA24352.1| K7_Pre3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298426|gb|EIW09523.1| Pre3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q ++ LY + G P T AA+ F EL K I++AGY
Sbjct: 65 SGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFK--ELCYE-NKDNLTAGIIVAGY 121
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D + +Y I ++HK+ A G GS F D++F MS EE VD +
Sbjct: 122 DDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFI 174
>gi|311697305|gb|ADQ00176.1| 20S proteasome beta subunit E type beta 5 [Chlamydomonas sp. ICE-L]
Length = 170
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
Query: 22 TEFIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
+F Q+N+ LY+ NG +T AA+ + + R + ++AG+D TGP
Sbjct: 8 CQFWQRNLGKQCRLYELNNGKRITVCAASKLLANTMFS-YRGMGLSMGTMVAGFD-ATGP 65
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
LYY+D K + + G GS ++ ++D + M V+EA++L + I R
Sbjct: 66 GLYYVDSDGQRTKGQRFSVGSGSLYAYGILDSGYKWDMPVDEAIELGRRAIYHATFRDCA 125
Query: 138 APPNFVIKIVDKDGARE 154
+ + V KDG ++
Sbjct: 126 SGGTVSVYHVTKDGWKK 142
>gi|351726355|ref|NP_001235588.1| uncharacterized protein LOC100499756 [Glycine max]
gi|255626321|gb|ACU13505.1| unknown [Glycine max]
Length = 237
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184
Query: 113 SGMSVEEA 120
++++EA
Sbjct: 185 KDLTLQEA 192
>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
evestigatum Z-7303]
gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
evestigatum Z-7303]
Length = 211
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 3/158 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D + +G GD Q I L++ R P+T L + R P
Sbjct: 47 IDDRIGMTTAGSVGDAQQIVRIISVESKLFKMRRNEPITIKGITTLLS-NLLSGQRYFPL 105
Query: 63 MVNILLAGYDKETGPSLYYIDYIA-TLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
MV +++ G DK TGP++Y +D + + + + A G GS + +++ +H M+ +E
Sbjct: 106 MVQLIVGGVDK-TGPNMYSLDPLGGRIEETNIVATGSGSPITYGLLEDRYHKDMTSDEGA 164
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+L + + R + + ++ KDG ++ E
Sbjct: 165 ELAIRALHNAMKRDSASGDGIDVVVITKDGYKQLDEEE 202
>gi|11513426|pdb|1G65|N Chain N, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513440|pdb|1G65|2 Chain 2, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11514005|pdb|1G0U|N Chain N, A Gated Channel Into The Proteasome Core Particle
gi|11514019|pdb|1G0U|2 Chain 2, A Gated Channel Into The Proteasome Core Particle
gi|14488812|pdb|1FNT|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488826|pdb|1FNT|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|20150390|pdb|1JD2|N Chain N, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150397|pdb|1JD2|U Chain U, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|75765706|pdb|1Z7Q|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765720|pdb|1Z7Q|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|93279381|pdb|2F16|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279395|pdb|2F16|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032215|pdb|2FAK|N Chain N, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032229|pdb|2FAK|2 Chain 2, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490856|pdb|2GPL|N Chain N, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490870|pdb|2GPL|2 Chain 2, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|178847473|pdb|2ZCY|N Chain N, Yeast 20s Proteasome:syringolin A-Complex
gi|178847487|pdb|2ZCY|1 Chain 1, Yeast 20s Proteasome:syringolin A-Complex
gi|178847515|pdb|3BDM|N Chain N, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847529|pdb|3BDM|1 Chain 1, Yeast 20s Proteasome:glidobactin A-Complex
gi|190016380|pdb|3D29|N Chain N, Proteasome Inhibition By Fellutamide B
gi|190016394|pdb|3D29|2 Chain 2, Proteasome Inhibition By Fellutamide B
gi|197725334|pdb|3E47|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725348|pdb|3E47|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939225|pdb|3DY3|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939239|pdb|3DY3|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939253|pdb|3DY4|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939267|pdb|3DY4|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828250|pdb|3GPJ|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828264|pdb|3GPJ|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588334|pdb|3GPT|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588348|pdb|3GPT|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588362|pdb|3GPW|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588376|pdb|3GPW|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588556|pdb|3HYE|N Chain N, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588570|pdb|3HYE|2 Chain 2, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|330689394|pdb|3MG4|N Chain N, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689408|pdb|3MG4|2 Chain 2, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361157|pdb|3MG0|N Chain N, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361171|pdb|3MG0|2 Chain 2, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361185|pdb|3MG6|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361199|pdb|3MG6|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361213|pdb|3MG7|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361227|pdb|3MG7|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361241|pdb|3MG8|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361255|pdb|3MG8|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|335892354|pdb|3OKJ|N Chain N, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892368|pdb|3OKJ|2 Chain 2, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780432|pdb|3OEU|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780446|pdb|3OEU|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780460|pdb|3OEV|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780474|pdb|3OEV|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610685|pdb|3TDD|N Chain N, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610699|pdb|3TDD|2 Chain 2, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545859|pdb|3SHJ|N Chain N, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545873|pdb|3SHJ|2 Chain 2, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|378792254|pdb|3UN4|N Chain N, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792268|pdb|3UN4|BB Chain b, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792288|pdb|3UN8|N Chain N, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792302|pdb|3UN8|BB Chain b, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980829|pdb|3SDI|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980843|pdb|3SDI|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980857|pdb|3SDK|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980871|pdb|3SDK|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550745|pdb|4GK7|N Chain N, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550759|pdb|4GK7|BB Chain b, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403072198|pdb|4G4S|H Chain H, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973873|pdb|4FZC|N Chain N, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973887|pdb|4FZC|BB Chain b, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973901|pdb|4FZG|N Chain N, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973915|pdb|4FZG|BB Chain b, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302352|pdb|4INR|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302366|pdb|4INR|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302380|pdb|4INT|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302394|pdb|4INT|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302408|pdb|4INU|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302422|pdb|4INU|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 196
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q ++ LY + G P T AA+ F EL K I++AGY
Sbjct: 46 SGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFK--ELCYE-NKDNLTAGIIVAGY 102
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D + +Y I ++HK+ A G GS F D++F MS EE VD +
Sbjct: 103 DDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFI 155
>gi|476044|emb|CAA55591.1| proteasomal subunit Pre3 [Saccharomyces cerevisiae]
gi|854572|emb|CAA60921.1| proteasome component pre3 [Saccharomyces cerevisiae]
gi|207343916|gb|EDZ71228.1| YJL001Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323304338|gb|EGA58111.1| Pre3p [Saccharomyces cerevisiae FostersB]
gi|323354485|gb|EGA86324.1| Pre3p [Saccharomyces cerevisiae VL3]
gi|365764803|gb|EHN06323.1| Pre3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|741845|prf||2008180A peptidyl-Glu protease
Length = 193
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q ++ LY + G P T AA+ F EL K I++AGY
Sbjct: 43 SGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFK--ELCYE-NKDNLTAGIIVAGY 99
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D + +Y I ++HK+ A G GS F D++F MS EE VD +
Sbjct: 100 DDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFI 152
>gi|256270206|gb|EEU05428.1| Pre3p [Saccharomyces cerevisiae JAY291]
Length = 216
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q ++ LY + G P T AA+ F EL K I++AGY
Sbjct: 66 SGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFK--ELCYE-NKDNLTAGIIVAGY 122
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D + +Y I ++HK+ A G GS F D++F MS EE VD +
Sbjct: 123 DDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFI 175
>gi|351721357|ref|NP_001235159.1| proteasome subunit alpha type-5 [Glycine max]
gi|12229923|sp|Q9M4T8.1|PSA5_SOYBN RecName: Full=Proteasome subunit alpha type-5; AltName: Full=20S
proteasome alpha subunit E; AltName: Full=20S proteasome
subunit alpha-5
gi|7839485|gb|AAF70292.1|AF255338_1 20S proteasome subunit [Glycine max]
Length = 237
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
++++EA + + IL+ V P N I V
Sbjct: 185 KDLTLQEA-ETIALSILKQVMEEKVTPNNVDIAKV 218
>gi|388510594|gb|AFK43363.1| unknown [Medicago truncatula]
gi|388521531|gb|AFK48827.1| unknown [Medicago truncatula]
Length = 237
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184
Query: 113 SGMSVEEA 120
++++EA
Sbjct: 185 KDLTLQEA 192
>gi|224034067|gb|ACN36109.1| unknown [Zea mays]
Length = 170
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESSTQAICDLALRFGEGD 60
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 61 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 117
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
+++EEA + + IL+ V P N I V
Sbjct: 118 KELALEEA-ETIALSILKQVMEEKVTPNNVDIAKV 151
>gi|297829986|ref|XP_002882875.1| hypothetical protein ARALYDRAFT_478846 [Arabidopsis lyrata subsp.
lyrata]
gi|297328715|gb|EFH59134.1| hypothetical protein ARALYDRAFT_478846 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184
Query: 113 SGMSVEEA 120
++++EA
Sbjct: 185 KDITLQEA 192
>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
DSM 10642]
gi|302595823|sp|D3RX66.1|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
placidus DSM 10642]
Length = 210
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD I+ +LY R T A A L ++R PY+V +L+
Sbjct: 52 MTTAGSVGDAQFLARLIKVETNLYTIRKEEEPTVKAVATLV-SNLLNSVRYFPYLVQLLI 110
Query: 69 AGYDKETGPSLYYIDYI-ATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G DK TG +Y ID I + ++D A G GS + +++ ++ ++V+EAV+L +
Sbjct: 111 GGVDK-TGAKIYSIDPIGGAIEEIDIVATGSGSPMAYGVLEDNYRKDINVDEAVELAIRA 169
Query: 128 ILEIRSRLVVAPPNF-VIKIVDKD 150
I R + V+KI +K+
Sbjct: 170 IYSAMKRDSASGDGIDVVKITEKE 193
>gi|333988299|ref|YP_004520906.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
SWAN-1]
gi|333826443|gb|AEG19105.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. SWAN-1]
Length = 207
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H +G ++I V+LY+ RNG ++ AAA T A L SP
Sbjct: 46 IDDHIGATIAGSVSHAQVLMKYISAEVALYRLRNGAIISVEAAATLT----ANILHSSPL 101
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V LL G D + GPSLY +D + K + G GS + +++ ++ M V+E +D
Sbjct: 102 YVQTLLGGVDNK-GPSLYSLDPSGGVMKDMMISTGSGSPMAYGVLEDRYNEDMYVDEGID 160
Query: 123 LVDKCI 128
+ I
Sbjct: 161 TAIRAI 166
>gi|242036903|ref|XP_002465846.1| hypothetical protein SORBIDRAFT_01g046910 [Sorghum bicolor]
gi|241919700|gb|EER92844.1| hypothetical protein SORBIDRAFT_01g046910 [Sorghum bicolor]
Length = 237
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESSTQAICDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
Query: 113 SGMSVEEA 120
+++EEA
Sbjct: 185 KELTLEEA 192
>gi|325968211|ref|YP_004244403.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323707414|gb|ADY00901.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 219
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D+H SG D + + + Y+ G P++ A AN+ + ++ R Y
Sbjct: 56 IDNHIAATMSGGVADLQKVLDSLTATAIQYKVDTGKPISIRALANYASLVVFSS-RPFVY 114
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHK-VDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
+V+++L G+D + GP +Y +D+ TL K + A G GS + +++ + MS+EEAV
Sbjct: 115 LVHMILGGWDPDEGPVIYMLDFFGTLTKETEFMATGSGSPTAFGVLEDGYKRDMSIEEAV 174
Query: 122 DLVDKCI 128
L + +
Sbjct: 175 RLAVRAV 181
>gi|300711728|ref|YP_003737542.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|448296163|ref|ZP_21486224.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|299125411|gb|ADJ15750.1| proteasome beta subunit [Halalkalicoccus jeotgali B3]
gi|445582886|gb|ELY37226.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
Length = 247
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 25 IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNI-LLAGYDKETGPSLYYID 83
++ V+LY R G ++ A + T + LR + + + +L G D E GP +Y +D
Sbjct: 106 LRAEVNLYDARQGEDMSMTALSTLT----SNLLRSGGFFIVVPVLGGVDDE-GPHIYSMD 160
Query: 84 YIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
+ + A G GS F+L ++++H+ G+SVEEA D+ + + R +
Sbjct: 161 ALGGTTEETYAVSGSGSQFALGVLEQHYEEGLSVEEARDVAIRSVGSAVERDTASGNGIN 220
Query: 144 IKIVDKDG 151
I V ++G
Sbjct: 221 IATVTEEG 228
>gi|149732106|ref|XP_001496055.1| PREDICTED: proteasome subunit beta type-8-like isoform 1 [Equus
caballus]
Length = 276
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + + +S+EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNSYAYGVMDSGYRNNLSIEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 227 LGRRAIVHATHR 238
>gi|226530826|ref|NP_001148604.1| proteasome subunit alpha type 5 [Zea mays]
gi|195620714|gb|ACG32187.1| proteasome subunit alpha type 5 [Zea mays]
gi|413957015|gb|AFW89664.1| hypothetical protein ZEAMMB73_505721 [Zea mays]
Length = 237
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESSTQAICDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
Query: 113 SGMSVEEA 120
+++EEA
Sbjct: 185 KELALEEA 192
>gi|422293816|gb|EKU21116.1| proteasome component c11, partial [Nannochloropsis gaditana
CCMP526]
Length = 185
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 77 PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH----------SGM---SVEEAVDL 123
PSLY++D + L K+ AA G S F ++D+ +H G S+EEA+ +
Sbjct: 51 PSLYWLDSLGALQKLPYAAHGEASVFLTGLLDQQYHQLEDEEGKRGGGKRLPSMEEALGI 110
Query: 124 VDKCILEIRSR-LVVAPPNFVIKIVDKDGAR 153
+D C E+ R LV A F +K+VD G R
Sbjct: 111 LDSCYQEMEKRFLVNAGGGFEVKVVDSKGVR 141
>gi|338718017|ref|XP_003363742.1| PREDICTED: proteasome subunit beta type-8-like isoform 2 [Equus
caballus]
Length = 208
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + + K LY RNG ++ +AA+ + R + ++ G+
Sbjct: 50 SGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGLSMGSMICGW 108
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
DK+ GP LYY+D T + + G G+ ++ +MD + + +S+EEA DL + I+
Sbjct: 109 DKK-GPGLYYVDENGTRLSGNMFSTGSGNSYAYGVMDSGYRNNLSIEEAYDLGRRAIVHA 167
Query: 132 RSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVS 167
R ++ +V+ +E W + V+ T VS
Sbjct: 168 THR-----DSYSGGVVNMYHMKEDGWVK-VESTDVS 197
>gi|183212415|gb|ACC54870.1| proteasome subunit beta type 2 [Xenopus borealis]
Length = 43
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 29/41 (70%)
Query: 13 GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGEL 53
GE GD VQ E+IQKNV LY+ RNG L+ AAANFTR L
Sbjct: 3 GEAGDTVQXAEYIQKNVQLYKMRNGYELSPTAAANFTRRNL 43
>gi|320587372|gb|EFW99852.1| proteasome component [Grosmannia clavigera kw1407]
Length = 229
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + L+ NG P TT AA + EL + K +++AG+
Sbjct: 75 SGSAADTQAVADIVQYQLGLFAMLNGKPPTTQTAAAIFQ-ELCYS-NKDQLSAGLIIAGW 132
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM +EAVD V + E
Sbjct: 133 DERYGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDSNWREGMEKDEAVDFVKGALKE 191
>gi|410721909|ref|ZP_11361231.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
gi|410598027|gb|EKQ52619.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
Length = 209
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H +G D ++I+ V+L++ RNG + AAA T L ++ R P+
Sbjct: 46 IDDHIGTTIAGAVSDAQSLMKYIRAEVALFRLRNGKRINVEAAATLTSNILHSS-RGYPF 104
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V LL G D + GP+LY +D + K + G GS + +++ + + VEE +D
Sbjct: 105 YVQTLLGGVD-DKGPALYSLDPTGGVIKDLMISTGSGSPVAYGVLEDRYSEDLYVEEGID 163
Query: 123 LVDKCI 128
+ + I
Sbjct: 164 VAIRAI 169
>gi|330834117|ref|YP_004408845.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329566256|gb|AEB94361.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 217
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 5/153 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGI-PLTTAAAANFTRGELATALRKSP 61
+D + +G D +QF KN+ Y +G P+T + A + L+ + + P
Sbjct: 60 IDDRIGMTTAGSVAD-LQFIYNYMKNIYHYNVISGNRPVTVKSLATYLTNVLSQS-KYFP 117
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
Y+V IL+ GYD T P L+ +DY+ + + A G GS ++ +++ + +S EEA+
Sbjct: 118 YLVQILIGGYD--TQPRLFNLDYLGDMTEETYVATGSGSPVAMGVLEDGYRPDLSGEEAM 175
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
DL + +L R ++ + KDG E
Sbjct: 176 DLGARAVLSAIKRDSFTGTGVIVTKLSKDGHVE 208
>gi|398390924|ref|XP_003848922.1| proteasome core particle subunit alpha 5 [Zymoseptoria tritici
IPO323]
gi|339468798|gb|EGP83898.1| hypothetical protein MYCGRDRAFT_76460 [Zymoseptoria tritici IPO323]
Length = 245
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQF----RNGIPLTTAA----AANFTRG-EL 53
+D H A SG D E + ++F R G+ T A A F G +
Sbjct: 70 IDRHVGCAMSGLQADARSMIEHARVTSQSHEFHYNERLGVESCTQAICDLALRFGEGADG 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + + FH
Sbjct: 130 EESIMSRPFGVALLIAGYD-ENGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHK 188
Query: 114 GMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKD-GAREYAWRE 159
+++EEA LV K + ++ + N + V KD G R Y E
Sbjct: 189 SLTLEEAEVLVLKTLKQVMEE-KLDSKNVQLASVTKDKGFRIYGDEE 234
>gi|256056346|ref|XP_002570228.1| proteasome subunit beta 2 (T01 family) [Schistosoma mansoni]
Length = 80
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 94 AAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
A GYG+ +LS++DR M+V EAV L+ CI E++ RLV+ ++++IV KDG
Sbjct: 9 AVHGYGALVALSILDRMHRPDMTVNEAVALLRLCIQEVQKRLVINLDRYMVRIVTKDGIE 68
Query: 154 E 154
E
Sbjct: 69 E 69
>gi|448468124|ref|ZP_21599755.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
gi|445810867|gb|EMA60881.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
Length = 243
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 25 IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYDKETGPSLYYID 83
++ SLY+ R G +T A + T G L LR Y+V +L G D E G +Y ID
Sbjct: 108 LKAETSLYETRRGKDMTMEALSTLT-GNL---LRSGAFYIVQPILGGVDDE-GAHIYSID 162
Query: 84 YIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
+ + + G GS ++L ++++ +H ++V+EA ++ K I R + +
Sbjct: 163 ALGGTTEEEYTVTGSGSQYALGVLEQEYHDDVTVDEATEIAAKAIQSAVERDLASGNGIN 222
Query: 144 IKIVDKDG 151
+ +V +DG
Sbjct: 223 VAVVTEDG 230
>gi|7141312|gb|AAF37285.1|AF226674_1 20S proteasome beta 5 subunit [Trypanosoma brucei]
Length = 250
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + L++ RN ++ AAA+ + R
Sbjct: 83 INEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAASKIL-ANITYQYRNHGL 141
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG+D + GPSLYY+D T K + + G GS ++ ++D+ + ++VEEA D
Sbjct: 142 SMGTMVAGWD-QFGPSLYYVDDKGTRVKHEIFSVGSGSIYAYGVLDQGYRKNLTVEEACD 200
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 201 LARRSIFHATYR 212
>gi|84489103|ref|YP_447335.1| PsmB [Methanosphaera stadtmanae DSM 3091]
gi|121697945|sp|Q2NI68.1|PSB_METST RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|84372422|gb|ABC56692.1| PsmB [Methanosphaera stadtmanae DSM 3091]
Length = 205
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 23 EFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYI 82
+ ++ +SLY+ RN ++ A A T + L+ PY V +LAG DK+ G LY +
Sbjct: 66 DILKAEISLYKLRNEKDMSIDALAVLT----SNILKSRPYYVQTILAGVDKD-GAKLYTL 120
Query: 83 DYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNF 142
D + + G GS ++ +++ ++ ++ EE + K I R V + N+
Sbjct: 121 DPSGSYIPDTFTSTGSGSPYAFGVLEDRYNEDITTEEGKKIAIKAITSAMERDVYSGNNY 180
Query: 143 VIKIVDKDGAREYAWRE 159
+ ++ KDG + Y E
Sbjct: 181 RLGVITKDGMKIYTKEE 197
>gi|365759936|gb|EHN01692.1| Pre3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401840755|gb|EJT43449.1| PRE3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 193
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q ++ LY + G P T AA+ F EL K I++AGY
Sbjct: 43 SGSAADTQAIADIVQYHLELYTSQYGPPSTETAASVFK--ELCYE-NKDNLTAGIIVAGY 99
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D + +Y I ++HK+ A G GS F D++F MS EE VD +
Sbjct: 100 DDKNKGEVYTIPIGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFI 152
>gi|217071540|gb|ACJ84130.1| unknown [Medicago truncatula]
Length = 237
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDDHIGCAMSGLITDARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184
Query: 113 SGMSVEEA 120
++++EA
Sbjct: 185 KDLTLQEA 192
>gi|399574445|ref|ZP_10768204.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
gi|399240277|gb|EJN61202.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
Length = 241
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 25 IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY-MVNILLAGYDKETGPSLYYID 83
++ SLY+ R G ++ A A LA LR + +V +L G D+E GP +Y +D
Sbjct: 106 LKAETSLYETRRGQDMSMQALATL----LANFLRSGAFFVVQPILGGVDEE-GPHVYSMD 160
Query: 84 YIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
+ + + + G GS ++L ++++H+ +S+EEA + K I R + +
Sbjct: 161 ALGGMSEENYTVTGSGSQYALGVLEQHYEEDLSIEEAKTVAAKAIQSAVERDLASGNGIN 220
Query: 144 IKIVDKDG 151
+ +V +G
Sbjct: 221 VAVVTDEG 228
>gi|444519089|gb|ELV12572.1| Proteasome subunit beta type-8 [Tupaia chinensis]
Length = 274
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 107 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 165
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +SVEEA D
Sbjct: 166 SMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNCYAYGVMDSGYRPDLSVEEAYD 224
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 225 LGRRAIVHATHR 236
>gi|255647791|gb|ACU24356.1| unknown [Glycine max]
Length = 227
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + G GS + S + F
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPFGTFWQCNGKGIGSGSEGADSFLQEQFS 184
Query: 113 SGMSVEEA 120
++++EA
Sbjct: 185 KDLTLQEA 192
>gi|71747590|ref|XP_822850.1| proteasome subunit beta 5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|10185394|emb|CAC08538.1| proteasome PRCE (beta-5) subunit precursor [Trypanosoma brucei]
gi|70832518|gb|EAN78022.1| proteasome beta 5 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332661|emb|CBH15656.1| proteasome beta 5 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 310
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + L++ RN ++ AAA+ + R
Sbjct: 143 INEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAASKIL-ANITYQYRNHGL 201
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG+D + GPSLYY+D T K + + G GS ++ ++D+ + ++VEEA D
Sbjct: 202 SMGTMVAGWD-QFGPSLYYVDDKGTRVKHEIFSVGSGSIYAYGVLDQGYRKNLTVEEACD 260
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 261 LARRSIFHATYR 272
>gi|347522758|ref|YP_004780328.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459640|gb|AEM38076.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 211
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
IA +G D + + Y+ G P AAA L A + P++ +L+
Sbjct: 52 IAFAGLYADMQALARILSAEIQYYEVSTGKPARVYAAAKLLSNIL-YASKLIPFITEVLV 110
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
G D ETG LY +D + ++ + D AA G G+ ++ +++ ++ MS++EA +L +K +
Sbjct: 111 GGVD-ETGSHLYVMDPVGSVIEDDYAALGSGAAIAIGILEANYRKDMSIDEAKELAEKAV 169
Query: 129 LEIRSRLVVAPPNFVIKIVDKDGAREYAWRES 160
R ++ I ++ + R A ES
Sbjct: 170 RIAIERDAISGDGIDILVIKRVDGRIVAIEES 201
>gi|145548529|ref|XP_001459945.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427772|emb|CAK92548.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + ++ + Y+ +NG L+ AAA+ F +G L + S
Sbjct: 49 INEYLLGTMAGGAADCQYWLAYLANHCRTYELKNGSKLSVAAASKFLQGIL-IGYKNSGL 107
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG D +G LYYID K D + G GS ++ ++D H+ +S+ EAV+
Sbjct: 108 SMGCMIAGTDL-SGQHLYYIDNDGMRLKGDIFSVGSGSTYAYGVLDNHYRYDLSLNEAVE 166
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 167 LGVRAIYHATHR 178
>gi|432331212|ref|YP_007249355.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
gi|432137921|gb|AGB02848.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
Length = 213
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD Q + +LYQ R P+T A A L R PY V +L+
Sbjct: 54 MTTAGGVGDAQQLARILNVECNLYQIRRSRPITVGATATLLSNYL-NQNRYFPYYVQLLV 112
Query: 69 AGYDKETGPSLYYIDYIATLHKVDK-AAFGYGSYFSLSMMDRHFHSGMSVEEAVDL 123
G D E GPS+Y +D + K ++ A G GS + +++ + GM+ E A+++
Sbjct: 113 GGVD-EKGPSVYSVDAMGGATKEEEIVATGSGSPMAYGVLEDRYKPGMTEEMAIEI 167
>gi|255647525|gb|ACU24226.1| unknown [Glycine max]
Length = 237
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVGSTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQYN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
++++EA + + IL+ V P N I V
Sbjct: 185 KDLTLQEA-ETIALSILKQVMEEKVTPNNVDIAKV 218
>gi|414864837|tpg|DAA43394.1| TPA: hypothetical protein ZEAMMB73_776732 [Zea mays]
Length = 170
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 1 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESSTQAICDLALRFGEGD 60
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 61 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 117
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
++++EA + + IL+ V P N I V
Sbjct: 118 KELTLQEA-ETIALSILKQVMEEKVTPNNVDIAKV 151
>gi|410931040|ref|XP_003978904.1| PREDICTED: proteasome subunit beta type-8-like [Takifugu rubripes]
Length = 275
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++S+ L SG D + + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INSYLLGTMSGSAADCMYWERLLAKECRLYRLRNNHRISVAAASKLL-ANMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DK+ GP LYY+D + G G+ ++ +++D M+VEEA D
Sbjct: 167 SVGSMICGWDKQ-GPGLYYVDENGNRFSGQMFSTGSGNSYAYAVVDSGLREDMTVEEAYD 225
Query: 123 LVDKCIL 129
L + I+
Sbjct: 226 LGRRGIV 232
>gi|440301472|gb|ELP93858.1| proteasome subunit beta type-5 precursor, putative [Entamoeba
invadens IP1]
Length = 254
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+ SH + +G D + + + L++ RN P++ AAA+ + +
Sbjct: 77 ITSHIVGTMAGGAADCSYWERELTRRCRLFELRNRPPISVAAASKIF-ANILYHYKNYDL 135
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V +++G+DK TGP +YY++ + + G GS F++S++D + M E+A++
Sbjct: 136 SVGSMISGFDK-TGPHIYYVEDGGVRIPGNIFSVGSGSPFAVSVIDTEYDYNMGKEKAIE 194
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
L + I R V + N + +D++G +
Sbjct: 195 LARRAIFHATHRDVASGGNVNVLFIDQNGWK 225
>gi|296242983|ref|YP_003650470.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095567|gb|ADG91518.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 206
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 19 VQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPS 78
V+ ++I K+ Y+ + G ++ A A+ L+ LR SP++V +LL G D E GP
Sbjct: 63 VENAKYIAKD---YELKMGKRISIDALASRISLILSAYLRFSPFIVQLLLGGVDHE-GPK 118
Query: 79 LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
LYY+D ++ + + G GS + ++++ + G+++EEA +L K +
Sbjct: 119 LYYMDLYGSVSRERFMSTGSGSPVAFGVLEQGYREGLTLEEAKELAFKAV 168
>gi|156937771|ref|YP_001435567.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595716|sp|A8AB58.1|PSB2_IGNH4 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|156566755|gb|ABU82160.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G D + ++ V Y+ + ++ AAA F L +A R PY+V +L+
Sbjct: 56 MTTAGLVADAQVLADVLRMEVKNYELFHKKRMSVKAAATFLSNVLHSA-RFYPYIVQLLV 114
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
G+D T P LY +D+ T+ + + G GS ++ +++ ++ M +EE V+L + +
Sbjct: 115 GGFD--TAPRLYSLDWFGTVAEEEFLVTGSGSPMAVGVIEAEYNPNMDLEELVNLAVRAV 172
Query: 129 LEIRSRLVVAPPNFVIKIVDKDG 151
R + + ++D++G
Sbjct: 173 FAATRRDTASGEGIDVAVIDRNG 195
>gi|161529236|ref|YP_001583062.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595719|sp|A9A2U7.1|PSB2_NITMS RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|160340537|gb|ABX13624.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 210
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H + +G D + ++ + +L++ P++ + A + R P+
Sbjct: 49 IDDHAGLTLAGGVADAQNIVDILRYHSNLHRVEKHGPISIHSLARLCS-LIFHQNRGYPF 107
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
M +IL+ GYD E GP+L+ ID ++ K G GS + +++ + ++VEEA
Sbjct: 108 MADILVGGYDAE-GPALFNIDMFGSVEKKAYVTTGSGSPVAYGLLEEEYREDLTVEEAKK 166
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ + + R + I I+DKDG R
Sbjct: 167 IALRAVKAAIVRNIGTGDGINIAIMDKDGFR 197
>gi|320582637|gb|EFW96854.1| proteasome component Pre3, putative [Ogataea parapolymorpha DL-1]
Length = 216
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + ++ ++ +Y+ NG P TT AA+ + EL A K I+ AGY
Sbjct: 65 SGSAADTQAVADIVKYHLEMYKANNGRPPTTKIAASLFQ-ELCYA-NKEMLTAGIICAGY 122
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D++ G +Y I +LHK + A G GS F ++F M+ +E V V
Sbjct: 123 DEKNGGQVYSIPLGGSLHKHEYAIAGSGSAFIYGYCKKNFKQDMTKDETVSFV 175
>gi|388520027|gb|AFK48075.1| unknown [Medicago truncatula]
Length = 237
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDDHIGCAMSGLITDARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSFLQEQFN 184
Query: 113 SGMSVEEA 120
++ +EA
Sbjct: 185 KDLTFQEA 192
>gi|407463311|ref|YP_006774628.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046933|gb|AFS81686.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 210
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H + +G D + ++ + +L++ P++ + A + R P+
Sbjct: 49 IDDHAGLTLAGGVADAQNIVDILRYHSNLHRVEKHGPISIHSLARLCS-LIFHQNRGYPF 107
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
M +IL+ GYD E GP+L+ ID ++ K G GS + +++ + ++VEEA
Sbjct: 108 MADILVGGYDTE-GPALFNIDMFGSVEKKSYVTTGSGSPVAYGLLEEEYKEDLTVEEAKK 166
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ + + R + I ++DKDG R
Sbjct: 167 IALRAVKAAIVRNIGTGDGINIAVMDKDGFR 197
>gi|388491684|gb|AFK33908.1| unknown [Lotus japonicus]
Length = 237
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D+H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDAHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
++++EA + + IL+ V P N I V
Sbjct: 185 KELTLQEA-ETIALSILKQVMEEKVTPNNVDIAKV 218
>gi|341057648|gb|EGS24079.1| hypothetical protein CTHT_0000100 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 229
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + ++ + L+ NG P TT AA + E+ A K +++AG+
Sbjct: 75 SGSAADTQAVADVVKYQLELFSMMNGRPPTTQTAAAIFQ-EICYA-NKDMLSAGLIIAGW 132
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D G +Y I +LH+ A G GS + D H+ GMS EEAV V + E
Sbjct: 133 DPRHGGQVYSIPLGGSLHRQAYAIGGSGSTYIYGYCDAHWREGMSEEEAVQFVKGALRE 191
>gi|356534412|ref|XP_003535749.1| PREDICTED: proteasome subunit alpha type-5-like [Glycine max]
Length = 236
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQYN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVI 144
++++EA + + IL+ V P N I
Sbjct: 185 KDLTLQEA-ETIALSILKQVMEEKVTPNNVDI 215
>gi|429217521|ref|YP_007175511.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429134050|gb|AFZ71062.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 210
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D + I++ LY+ N LT A L + + PY+V +++ GY
Sbjct: 61 AGLVADAQMLADAIREEARLYETMNKRKLTVKGMATLLANVLFST-KYYPYLVQLIVGGY 119
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
D E P LY +DY ++ + + G GS +L ++++ + +S+EEA++L K I
Sbjct: 120 DTE--PRLYNLDYFGSITEEKMTSTGSGSPVALGVLEKDYRPDLSLEEAMNLAAKAI 174
>gi|345566204|gb|EGX49149.1| hypothetical protein AOL_s00079g21 [Arthrobotrys oligospora ATCC
24927]
Length = 243
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAAN--------FTRG-EL 53
+D H A SG D E + + F G PL +A F G +
Sbjct: 70 IDRHLGCAMSGLQADARSMIEHARVEAQNHTFHYGEPLRVESATQAICDLALRFGEGADG 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD++ GP LY+ + T ++ D A G GS + + + +HS
Sbjct: 130 EESIMSRPFGVALLIAGYDQD-GPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHS 188
Query: 114 GMSVEEAVDLVDKCILEI 131
+++ EA +LV K + ++
Sbjct: 189 SLTLAEAENLVLKTLKQV 206
>gi|47195083|emb|CAG14114.1| unnamed protein product [Tetraodon nigroviridis]
Length = 76
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 39/55 (70%)
Query: 100 SYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
++ +LS++D H+ ++ EEAVDL+ C+ E+ R ++ P+F ++++DK+G RE
Sbjct: 16 TFLTLSILDGHYRPDLTREEAVDLLKMCVEELGKRFILNLPSFTVRLIDKEGIRE 70
>gi|359806124|ref|NP_001241191.1| uncharacterized protein LOC100799919 [Glycine max]
gi|255641541|gb|ACU21044.1| unknown [Glycine max]
Length = 237
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQYN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
++++EA + + IL+ V P N I V
Sbjct: 185 KDLTLQEA-ETIALSILKQVMEEKVTPNNVDIAKV 218
>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
gi|121697221|sp|Q46G14.1|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosarcina barkeri
str. Fusaro]
Length = 211
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D + +G GD Q + LY+ R +T A L + R P
Sbjct: 46 IDDLVAMTTAGSVGDAQQLVRLVNVESQLYKMRRNESMTIKGIATLMSNFLNSN-RYYPM 104
Query: 63 MVNILLAGYDKETGPSLYYIDYI-ATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
MV +L+ G DK GP +Y +D + ++ + +A G GS + +++ + M+V+E +
Sbjct: 105 MVQLLIGGVDK-NGPGIYSLDALGGSIEETRISATGSGSPMAYGVLEDQYREDMTVKEGL 163
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
DL + I R + N + ++ K+ R
Sbjct: 164 DLAIRAIHNATKRDSASGENIDVVVITKEAFR 195
>gi|124485835|ref|YP_001030451.1| hypothetical protein Mlab_1015 [Methanocorpusculum labreanum Z]
gi|302595748|sp|A2SS78.1|PSB_METLZ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|124363376|gb|ABN07184.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G GD Q I +LY+ R G ++ AAA L R SPY V +L+ G
Sbjct: 57 AGGVGDAQQLVRIINVECNLYEIRRGQKISVGAAATILSNYL-NQNRFSPYYVQLLVGGV 115
Query: 72 DKETGPSLYYIDYI--ATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
D +GPS+Y +D ATL + + + G GS + +++ F M+ EEA++L + +
Sbjct: 116 DT-SGPSVYSVDAAGGATLEE-NFVSTGSGSLTAYGVLEDRFKPNMTEEEAIELAVRAL 172
>gi|374633123|ref|ZP_09705490.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373524607|gb|EHP69484.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 196
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RKSPYMVN 65
I +G GD T + N+ Y+ NG P++ AAA L+ L + P++
Sbjct: 47 IGGAGLFGDLQALTRIMNANIRYYELYNGRPISARAAAKL----LSIILYQYKYMPFISE 102
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
+L AG D T P L+ +D + +L AA G G+ ++ +++ + M++ +A +L
Sbjct: 103 VLFAGIDDGT-PQLFVLDPLGSLLDDIYAAVGSGARVAIGVLEAEYKDSMNLTQARELAL 161
Query: 126 KCILEIRSRLVVAPPNFVIKIVDKDG 151
K + R V + + I+DK+G
Sbjct: 162 KSLRASVERDVTSGDGIDLLIIDKNG 187
>gi|115486269|ref|NP_001068278.1| Os11g0615700 [Oryza sativa Japonica Group]
gi|12229920|sp|Q9LSU1.1|PSA5_ORYSJ RecName: Full=Proteasome subunit alpha type-5; AltName: Full=20S
proteasome alpha subunit E; AltName: Full=20S proteasome
subunit alpha-5
gi|8671498|dbj|BAA96832.1| alpha 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|77551899|gb|ABA94696.1| Proteasome subunit alpha type 5, putative, expressed [Oryza sativa
Japonica Group]
gi|113645500|dbj|BAF28641.1| Os11g0615700 [Oryza sativa Japonica Group]
gi|215737179|dbj|BAG96108.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765321|dbj|BAG87018.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186097|gb|EEC68524.1| hypothetical protein OsI_36813 [Oryza sativa Indica Group]
gi|222616332|gb|EEE52464.1| hypothetical protein OsJ_34630 [Oryza sativa Japonica Group]
Length = 237
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKD 150
++++EA + + IL+ V P N I V +
Sbjct: 185 KELTLQEA-ETIALSILKQVMEEKVTPNNVDIAKVSPN 221
>gi|226499840|ref|NP_001149918.1| proteasome subunit alpha type 5 [Zea mays]
gi|242071701|ref|XP_002451127.1| hypothetical protein SORBIDRAFT_05g024560 [Sorghum bicolor]
gi|195635461|gb|ACG37199.1| proteasome subunit alpha type 5 [Zea mays]
gi|223946287|gb|ACN27227.1| unknown [Zea mays]
gi|241936970|gb|EES10115.1| hypothetical protein SORBIDRAFT_05g024560 [Sorghum bicolor]
gi|414864838|tpg|DAA43395.1| TPA: proteasome subunit alpha type [Zea mays]
Length = 237
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESSTQAICDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
Query: 113 SGMSVEEA 120
++++EA
Sbjct: 185 KELTLQEA 192
>gi|218884599|ref|YP_002428981.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|302595713|sp|B8D683.1|PSB2_DESK1 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|218766215|gb|ACL11614.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
Length = 206
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 32 YQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKV 91
Y+ G P+ A A+ L+ LR SP++V +LL G D TG SLYY+D ++ +
Sbjct: 73 YEIEMGGPIPIKALASRISLILSVYLRYSPFIVQLLLGGRD-STGASLYYMDLYGSVTRE 131
Query: 92 DKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDL 123
A G GS + ++++++ S +S+EEA L
Sbjct: 132 KYMATGSGSPVAFGILEKNYRSDLSLEEAKKL 163
>gi|435851174|ref|YP_007312760.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433661804|gb|AGB49230.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 210
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLT----TAAAANFTRGELATALRKSPYMV 64
+ +G GD Q + LY+ R P+T T +N G+ R P MV
Sbjct: 52 MTTAGSVGDAQQIVRVMSVESHLYKMRRKEPMTIKGITTLLSNILSGQ-----RYYPLMV 106
Query: 65 NILLAGYDKETGPSLYYIDYIA-TLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDL 123
+L+ G DK GP+++ +D + T+ + A G GS + +++ F G+S+EE V+L
Sbjct: 107 QLLVGGVDKN-GPAIFSLDALGGTIEETKAVATGSGSPMAYGVLEDRFVDGLSIEEGVEL 165
>gi|50288021|ref|XP_446439.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525747|emb|CAG59366.1| unnamed protein product [Candida glabrata]
Length = 286
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ + ++ AAA+ G L + + + ++ GY K+ GP
Sbjct: 126 CQFWETWLGSQCRLHELKEKERISVAAASKIL-GNLVYQYKGAGLSMGTMICGYTKKEGP 184
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVEEA+ L + IL R
Sbjct: 185 TIYYVDSDGTRLKGDLFCVGSGQTFAYGVLDSNYKWDLSVEEALYLGKRSILAAAHRDAY 244
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 245 SGGSINLYHVTEDG 258
>gi|361125318|gb|EHK97365.1| putative proteasome subunit alpha type-5 [Glarea lozoyensis 74030]
Length = 254
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRG-EL 53
+D H A SG D E + + F PL + A F G E
Sbjct: 79 IDRHIGCAMSGLQADARSMVEHARVESQNHAFHFNEPLRVESCTQAICDLALRFGEGAEG 138
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GP LY+ + T ++ D A G GS + + + FH
Sbjct: 139 EESIMSRPFGVALLIAGYD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHK 197
Query: 114 GMSVEEAVDLVDKCILEI 131
+++EEA LV K + ++
Sbjct: 198 SLTIEEAETLVLKTLKQV 215
>gi|452845399|gb|EME47332.1| hypothetical protein DOTSEDRAFT_166290 [Dothistroma septosporum
NZE10]
Length = 245
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQF----RNGIPLTTAA----AANFTRG-EL 53
+D H A SG D E + ++F R G+ T A A F G E
Sbjct: 70 IDRHIGCAMSGLQADARSMIEHARVTSQSHEFHYNERLGVESCTQAICDLALRFGEGAEG 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + + FH
Sbjct: 130 EESIMSRPFGVALLIAGYD-EDGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHK 188
Query: 114 GMSVEEAVDLVDKCILEI 131
++++EA LV K + ++
Sbjct: 189 SLTLDEAEVLVLKTLKQV 206
>gi|195483333|ref|XP_002086940.1| GE14911 [Drosophila yakuba]
gi|194186681|gb|EDX00293.1| GE14911 [Drosophila yakuba]
Length = 314
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 97 GYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
GY + F+ S+ DR++H +S EA D+ KCI EI+ RL+V+ F + +VDKD E
Sbjct: 23 GYCAIFASSIYDRYWHPNISQAEAYDVYKKCIAEIQKRLLVSLKKFTVAVVDKDATTE 80
>gi|14590176|ref|NP_142241.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|74570532|sp|O57983.1|PSB1_PYRHO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|3256634|dbj|BAA29317.1| 197aa long hypothetical proteasome beta subunit [Pyrococcus
horikoshii OT3]
Length = 197
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
I +G GD ++ Y F G P+TT A AN L+ L ++ PY+V
Sbjct: 49 ITTAGSVGDVQMIARILEAEARYYYFAWGRPMTTKAMANL----LSNILNENKWFPYLVQ 104
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I++ GY E P++ +D L + A G G+ F++++++ + + +EEA +L
Sbjct: 105 IIIGGYVDE--PTIANLDPYGGLIFDNYTATGSGTPFAIAILEEGYKENLGIEEAKELAI 162
Query: 126 KCILEIRSRLVVAPPNFV-IKIVDKDGARE 154
K I SR V V + + K+G +E
Sbjct: 163 KAIKAAGSRDVYTGSKKVQVVTITKEGMQE 192
>gi|401412600|ref|XP_003885747.1| Family T1, proteasome beta subunit, threonine peptidase, related
[Neospora caninum Liverpool]
gi|325120167|emb|CBZ55721.1| Family T1, proteasome beta subunit, threonine peptidase, related
[Neospora caninum Liverpool]
Length = 310
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 29 VSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY-DKETGPSLYYIDYIAT 87
L++ RNG P+ AAA+N + R ++AG+ +KE P LY++D AT
Sbjct: 160 CKLFKLRNGEPIPVAAASNML-ANIFFHWRGYGLCCGTMIAGWNEKEEKPELYFVDDKAT 218
Query: 88 LHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSR 134
K D + G GS ++ ++D + M+ EEAV+L + I + R
Sbjct: 219 RLKGDLFSCGSGSTYAYGVLDNEYKWDMTDEEAVELGKRAIYQAAHR 265
>gi|401827855|ref|XP_003888220.1| proteasome beta type-6 subunit [Encephalitozoon hellem ATCC 50504]
gi|392999420|gb|AFM99239.1| proteasome beta type-6 subunit [Encephalitozoon hellem ATCC 50504]
Length = 202
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLY-QFRNGIPLTTAAAANFTRGELATAL--RKSPYMV 64
+ SG D +E+++ + +Y Q N PL AA LA+ + +
Sbjct: 51 FVCRSGSAADTQTISEYLKMYLKMYSQLENAAPLVHRAAT------LASKIIYENPSLLA 104
Query: 65 NILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
+++AGYD++ P ++ I TL + D G GS F S D ++ SGMS+EE + +
Sbjct: 105 GLIVAGYDEK--PRIFNISLGGTLMECDWTIGGSGSAFIYSYCDMNWRSGMSLEEGIRFI 162
Query: 125 DKCILEIRSRLVVAPPNFVIKIVDKDGAREY 155
+ SR + + + +DG + Y
Sbjct: 163 KDAVTCAISRDNASGGCIRMSAITRDGVQRY 193
>gi|326915585|ref|XP_003204095.1| PREDICTED: proteasome subunit beta type-1-like [Meleagris
gallopavo]
Length = 237
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RK 59
L H +I SG GD + T+ I+ + +Y+ N +TT A A L+T L R
Sbjct: 70 LTEHTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAM----LSTILYSRRF 125
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF-------- 111
PY V ++ G D+E ++Y D + + + A G S ++D
Sbjct: 126 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQIGFKNMQNV 185
Query: 112 -HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
H +++E+A+ LV + R V I +V KDG +E
Sbjct: 186 EHVPLTLEKALQLVKDVFISAAERDVYTGDALKICVVTKDGIKE 229
>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
aggregans DSM 17230]
Length = 236
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
L + I +G D ++I+ Y + N P++ + A+ G + + P+
Sbjct: 68 LTENSAITIAGLVADAQTLADYIRAEAYYYYYINNRPMSIRSMASLL-GLILNEYKYFPF 126
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+V ++L GYD G L+ IDY + + A G GS ++ +++ + MS+++AV
Sbjct: 127 IVQLILGGYDYYEGAKLFSIDYFGDVTEERYTATGSGSPIAIGVIESGYRPEMSIDDAVS 186
Query: 123 LVDKCILEIRSRLVVAPPNFV-IKIVDKDGAREYAWR 158
LV K + R V + V + ++ KD RE ++
Sbjct: 187 LVVKAVATASMRDVFSGGIGVDVVVIGKDFYREMTFQ 223
>gi|390939089|ref|YP_006402827.1| Proteasome endopeptidase complex [Desulfurococcus fermentans DSM
16532]
gi|390192196|gb|AFL67252.1| Proteasome endopeptidase complex [Desulfurococcus fermentans DSM
16532]
Length = 207
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 32 YQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKV 91
Y+ G P+ A A+ L+ LR SP++V +LL G D TG SLYY+D ++ +
Sbjct: 74 YEIEIGGPIPIKALASRISLILSVYLRYSPFIVQLLLGGRD-STGASLYYMDLYGSVTRE 132
Query: 92 DKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDL 123
A G GS + ++++++ S +S+EEA L
Sbjct: 133 KYMATGSGSPVAFGILEKNYRSDLSLEEAKKL 164
>gi|119719224|ref|YP_919719.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595702|sp|A1RWY6.1|PSB1_THEPD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119524344|gb|ABL77716.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 200
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+DSH +G GD Q + ++ Y+ G + + A L + P
Sbjct: 49 IDSHIAATIAGTVGDAQQLVDRLRVEARYYKTITGDSMPVKSVATLASLIL---FQYRPI 105
Query: 63 M-VNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
+ V +L+ G D + GPSL+ +D++ T+ + A G GS +++S+++ + +S+EEAV
Sbjct: 106 LSVQMLIGGVDSD-GPSLFSVDWLGTVTREKYTATGSGSPYAVSLLEHEYREDLSLEEAV 164
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+L K + +R + I + K+G R
Sbjct: 165 NLAVKAVNIALARDPGSGEGVDIATITKEGIR 196
>gi|255089791|ref|XP_002506817.1| predicted protein [Micromonas sp. RCC299]
gi|226522090|gb|ACO68075.1| predicted protein [Micromonas sp. RCC299]
Length = 291
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 22 TEFIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
+F Q+N+ L++ NG ++ A A+ L R + ++AG+D + GP
Sbjct: 114 CQFWQRNLGIQCRLHELENGKRISVAGASKLLANTL-YGYRGQGLSMGTMVAGWDLK-GP 171
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
LYY+D T K + + G GS F+ ++D+ + +SVEEA +L + I R
Sbjct: 172 GLYYVDSDGTRLKGQRFSVGSGSLFAYGVLDQGYRWDLSVEEACELGRRAIYHATFRDAF 231
Query: 138 APPNFVIKIVDKDG 151
+ + V+++G
Sbjct: 232 SGGTISVYHVNENG 245
>gi|108860908|sp|Q3T112.2|PSB8_BOVIN RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Proteasome subunit beta-5i; Flags: Precursor
gi|63169161|gb|AAY34697.1| proteasome subunit beta type 8 [Bos taurus]
gi|296474549|tpg|DAA16664.1| TPA: proteasome subunit beta type-8 precursor [Bos taurus]
Length = 276
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ + +MD + +S+EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 227 LGRRAIVHATHR 238
>gi|336369943|gb|EGN98284.1| hypothetical protein SERLA73DRAFT_183200 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382704|gb|EGO23854.1| hypothetical protein SERLADRAFT_470232 [Serpula lacrymans var.
lacrymans S7.9]
Length = 319
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + ++ + L++ RN ++ AAA+ + L + + +
Sbjct: 119 INPYLLGTMAGGAADCQYWEMYLGMHCRLHELRNRERISVAAASKYLS-NLVYSYKGTGL 177
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK TGP+LYY+D T K D + G GS F+ ++D+ + G++ EEA +
Sbjct: 178 SMGTMICGWDK-TGPALYYVDADGTRLKGDLFSVGSGSTFAYGVLDQGYKWGLTDEEAQE 236
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 237 LGRRSIYAAGHR 248
>gi|374326224|ref|YP_005084424.1| proteasome subunit beta [Pyrobaculum sp. 1860]
gi|356641493|gb|AET32172.1| proteasome, beta subunit [Pyrobaculum sp. 1860]
Length = 203
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAAN------FTRGELAT 55
V+D IA++G D + ++ N Y+ + A A F+R
Sbjct: 44 VVDDKLAIASAGIIADMQALAKILKLNAKSYELEMKKKPSVHAMAKLLSVVMFSR----- 98
Query: 56 ALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGM 115
R P+ +L+ G D+E GP L +D + +L + + AA G G+ + +++D ++ + M
Sbjct: 99 --RFMPFFAEVLVGGVDEE-GPHLIVMDPLGSLIEDNYAALGTGAKLAAAVLDGNYRNDM 155
Query: 116 SVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWR 158
S+EEA L + + R V+ + +VD+ GARE R
Sbjct: 156 SIEEAKKLAVQALKAAIERDPVSGGGIDLVVVDEKGAREEEVR 198
>gi|367047641|ref|XP_003654200.1| hypothetical protein THITE_2117002 [Thielavia terrestris NRRL 8126]
gi|347001463|gb|AEO67864.1| hypothetical protein THITE_2117002 [Thielavia terrestris NRRL 8126]
Length = 229
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + ++ + L+ NG P TT AA + E+ A K +++AG+
Sbjct: 75 SGSAADTQAVADIVKYQLELFSMMNGKPPTTQTAAAIFQ-EICYA-NKDRLTAGLIIAGW 132
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D H+ GM AVD V + E
Sbjct: 133 DERHGGQVYSIPIGGSLHKQPYAIGGSGSTYIYGFCDAHWREGMDEAAAVDFVKAALQE 191
>gi|294953043|ref|XP_002787566.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
marinus ATCC 50983]
gi|239902590|gb|EER19362.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
marinus ATCC 50983]
Length = 276
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Query: 7 KLIAASGEPGDRVQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVN 65
+LI QF E + K LY+ RN +TTAAA+ + + +
Sbjct: 102 RLIGTMAGGAADCQFWERHLGKLCKLYELRNNQRITTAAASKML-ANIMYSYKGYGLSCG 160
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
++AGYD TGP+LY +D T K + + G GS ++ ++D + ++++EAV L
Sbjct: 161 TMIAGYDAVTGPALYMVDDQGTRLKNNMFSVGSGSTYAYGIVDAGYKHDLTLDEAVALGK 220
Query: 126 KCILEIRSRLVVAPPNFVIKIVDKDG 151
+ I ++ + + V KDG
Sbjct: 221 RAIYHATNKDGASGGYVRVYHVHKDG 246
>gi|431916890|gb|ELK16650.1| Proteasome subunit beta type-8 [Pteropus alecto]
Length = 274
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 107 INPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 165
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY++ T + + G G+ ++ +MD + +S+EEA D
Sbjct: 166 SIGSMICGWDKK-GPGLYYVNENGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSLEEAYD 224
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 225 LGRRAIVHATHR 236
>gi|254578806|ref|XP_002495389.1| ZYRO0B10142p [Zygosaccharomyces rouxii]
gi|238938279|emb|CAR26456.1| ZYRO0B10142p [Zygosaccharomyces rouxii]
Length = 215
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + LY + G P T AAA F + K I++AGY
Sbjct: 65 SGSAADTQAVADIVQYYLDLYTAQYGEPSTRTAAAIFQQ---LCYENKDALTAGIIVAGY 121
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D++ +Y I +LHK A G GS F D+++ GM+ +E VD +
Sbjct: 122 DEKNQGEVYSIPIGGSLHKQKYAIAGSGSTFIYGYCDKNYKDGMTKDETVDFI 174
>gi|388509786|gb|AFK42959.1| unknown [Lotus japonicus]
Length = 237
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D+H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDAHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + +
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYD 184
Query: 113 SGMSVEEA 120
++++EA
Sbjct: 185 KELTLQEA 192
>gi|307595676|ref|YP_003901993.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307550877|gb|ADN50942.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 205
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
IA+ G D T+ + +SLY + +AA L A R PY V +L+
Sbjct: 52 IASIGILADMQVLTKIAKAYMSLYALDTKTRPSIRSAAKLLSYVL-FANRVLPYFVEVLV 110
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
G D E GP L+ +D + +L + D AA G G+ ++++++ ++ M+V+EA +L K I
Sbjct: 111 GGVDDE-GPHLFIMDSLGSLIEDDYAAVGTGTKLAIAILESNYKPSMTVKEARELAIKAI 169
Query: 129 LEIRSRLVVAPPNFVIKIVDKDGARE 154
+ SR V+ I + +G+ E
Sbjct: 170 NQSISRDPVSGDGIDILTITGNGSAE 195
>gi|340345703|ref|ZP_08668835.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520844|gb|EGP94567.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 210
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D+H + +G D + ++ + +L++ P++ + A + R P+
Sbjct: 49 IDAHAGLTLAGGVADAQNIVDILRYHSNLHRVEKQGPISIHSLARLCS-LIFHQNRGYPF 107
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
M +IL+ GYD GP+L+ ID ++ + G GS + +++ + S ++VEEA
Sbjct: 108 MADILVGGYDA-NGPALFNIDMFGSVEQKSYVTTGSGSPVAYGLLEEEYRSDLTVEEAKK 166
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ + + R + I ++DKDG R
Sbjct: 167 IALRAVKAAIVRNIGTGDGINIAVMDKDGFR 197
>gi|6653277|gb|AAF22654.1| interferon-gamma inducible proteasome subunit LMP7 [Bos taurus]
Length = 193
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + + K LY RNG ++ +AA+ + R
Sbjct: 34 INPYLLGTMSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 92
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ + +MD + +S+EEA D
Sbjct: 93 SMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYD 151
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 152 LGRRAIVHATHR 163
>gi|407409749|gb|EKF32460.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi marinkellei]
Length = 311
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + L++ RN ++ AAA+ + + R
Sbjct: 147 INEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAASKIL-ANITYSYRNYGL 205
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG+D + GPSLYY+D T K + + G GS ++ ++D+ + ++VEEA +
Sbjct: 206 SMGTMVAGWD-QFGPSLYYVDDKGTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACE 264
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 265 LARRSIFHATYR 276
>gi|440789731|gb|ELR11030.1| proteasome endopeptidase subunit, putative [Acanthamoeba
castellanii str. Neff]
Length = 275
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D + + + LYQ RN +T AAA+ + R V ++ G+
Sbjct: 107 AGGAADCSYWERELGRRTRLYQLRNKERMTVAAASKVL-SNILYYYRNQGLSVGSMICGW 165
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
DK GP+++Y+D T K DK + G G ++ +MD + ++VEEA +L + I
Sbjct: 166 DKR-GPNIFYVDSDGTRLKGDKFSVGSGGTYAYGVMDAGYRFDLTVEEACELGRRAIFHA 224
Query: 132 RSR 134
R
Sbjct: 225 AHR 227
>gi|195027377|ref|XP_001986559.1| GH20460 [Drosophila grimshawi]
gi|193902559|gb|EDW01426.1| GH20460 [Drosophila grimshawi]
Length = 280
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D V + + K L++ RN ++ AAA+ +A + + ++LAGY
Sbjct: 119 AGGAADCVYWDRVLAKECRLHELRNKERISVAAASKIM-ANIAHEYKGMGLSMGMMLAGY 177
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
DK GP LYY+D + + + G GS F+ ++D +H + EA +L + I
Sbjct: 178 DKR-GPGLYYVDSEGSRTPGNVFSVGSGSIFAFGVLDSGYHWDLKDTEAQELGRRAIYHA 236
Query: 132 R---------SRLVVAPPNFVIKIVDKD 150
R+ PN IKI D D
Sbjct: 237 TFRDAYSGGIVRVYHMTPNGWIKISDTD 264
>gi|154150927|ref|YP_001404545.1| proteasome endopeptidase complex protein [Methanoregula boonei 6A8]
gi|302595832|sp|A7I841.1|PSB_METB6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|153999479|gb|ABS55902.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
Length = 213
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G GD Q I +LYQ R +T AA+ L R PY V +L+ G
Sbjct: 57 AGGVGDAQQLARIITVECNLYQIRRSREITVGAASTLLSNYL-NQNRYFPYYVQLLVGGI 115
Query: 72 DKETGPSLYYIDYIATLHKV-DKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D + GPS+Y +D + K D + G GS + +++ + GM+ +EAV+L + +
Sbjct: 116 D-DHGPSVYSVDAMGGATKEEDIVSTGSGSPMAYGVLEDRYRPGMNEDEAVELAVRALRS 174
Query: 131 IRSRLVVAPPNFVIKIVDKD 150
R + + ++ KD
Sbjct: 175 AMKRDAGSGEGIHVVVITKD 194
>gi|51340809|gb|AAC97957.2| proteasome beta 5 subunit [Trypanosoma cruzi]
Length = 261
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + L++ RN ++ AAA+ + + R
Sbjct: 97 INEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAASKIL-ANITYSYRNYGL 155
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG+D + GPSLYY+D T K + + G GS ++ ++D+ + ++VEEA +
Sbjct: 156 SMGTMVAGWD-QFGPSLYYVDDKGTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACE 214
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 215 LARRSIFHATYR 226
>gi|417398038|gb|JAA46052.1| Putative 20s proteasome regulatory subunit beta type [Desmodus
rotundus]
Length = 263
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ AAF G GS ++ +MDR ++ + VEEA
Sbjct: 155 SMGTMICGWDKR-GPGLYYVD--SEGNRISGAAFSVGSGSVYAYGVMDRGYYYDLEVEEA 211
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DL + I + R + + V +DG
Sbjct: 212 YDLARRAIYQATYRDAYSGGAVNLYHVREDG 242
>gi|348577545|ref|XP_003474544.1| PREDICTED: proteasome subunit beta type-5-like [Cavia porcellus]
Length = 263
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ AAF G GS ++ +MDR + + VEEA
Sbjct: 155 SMGTMICGWDKR-GPGLYYVD--SEGNRISGAAFSVGSGSVYAYGVMDRGYSYDLQVEEA 211
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DL + I + R + + + V +DG
Sbjct: 212 YDLARRAIYQATYRDAYSGGSVNLYHVREDG 242
>gi|302836892|ref|XP_002950006.1| hypothetical protein VOLCADRAFT_74437 [Volvox carteri f.
nagariensis]
gi|300264915|gb|EFJ49109.1| hypothetical protein VOLCADRAFT_74437 [Volvox carteri f.
nagariensis]
Length = 272
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Query: 22 TEFIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
+F Q+N+ LY+ NG +T AA+ + + R + ++AG+D TGP
Sbjct: 110 CQFWQRNLGMRCRLYELNNGKRITVCAASKLLANTMFS-YRGMGLSMGTMVAGWD-STGP 167
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
LYY+D K + G GS ++ ++D + +SVEEA++L + I R
Sbjct: 168 GLYYVDSDGQRTKGQIFSVGSGSLYAYGVLDSGYRWDLSVEEAIELGRRSIYHAGFRDCA 227
Query: 138 APPNFVIKIVDKDG 151
+ + V +DG
Sbjct: 228 SGGTVSVYHVTQDG 241
>gi|156045147|ref|XP_001589129.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154694157|gb|EDN93895.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 242
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 10/166 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRG-EL 53
+D H A SG D E + + F PL + A F G +
Sbjct: 67 IDRHIGCAMSGLQADARSMVEHARVESQNHSFHYNEPLRVESCTQAICDLALRFGEGADG 126
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GP LY+ + T ++ D A G GS + + + FH
Sbjct: 127 EESIMSRPFGVALLIAGYD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHK 185
Query: 114 GMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+++EEA LV K + ++ + + + + + G R Y E
Sbjct: 186 SLTIEEAETLVLKTLKQVMEEKLDSKNVQLASVTKEKGFRIYTDEE 231
>gi|326501362|dbj|BAJ98912.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508742|dbj|BAJ95893.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 237
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHVGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
Query: 113 SGMSVEEA 120
+++ EA
Sbjct: 185 KELTIAEA 192
>gi|154294634|ref|XP_001547757.1| 20S proteasome alpha subunit E [Botryotinia fuckeliana B05.10]
gi|347840744|emb|CCD55316.1| similar to proteasome subunit alpha type-5 [Botryotinia fuckeliana]
Length = 245
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 10/166 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRG-EL 53
+D H A SG D E + + F PL + A F G +
Sbjct: 70 IDRHIGCAMSGLQADARSMVEHARVESQNHSFHYNEPLRVESCTQAICDLALRFGEGADG 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GP LY+ + T ++ D A G GS + + + FH
Sbjct: 130 EESIMSRPFGVALLIAGYD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHK 188
Query: 114 GMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+++EEA LV K + ++ + + + + + G R Y E
Sbjct: 189 SLTIEEAETLVLKTLKQVMEEKLDSKNVQLASVTKEKGFRIYTDEE 234
>gi|45184652|ref|NP_982370.1| AAL172Cp [Ashbya gossypii ATCC 10895]
gi|44979998|gb|AAS50194.1| AAL172Cp [Ashbya gossypii ATCC 10895]
gi|374105568|gb|AEY94479.1| FAAL172Cp [Ashbya gossypii FDAG1]
Length = 215
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + LY + G P + AA+ F+ K I++AGY
Sbjct: 65 SGSAADTQAVADMVQHYLELYTMQYGEPSASTAASLFS---TICYENKDHLTAGIIVAGY 121
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D + +Y I ++HK A G GS F D+HF MS EE +D +
Sbjct: 122 DDKNKGEVYSIPLGGSVHKAPYAIAGSGSTFIYGYCDKHFREDMSKEETIDFM 174
>gi|390190130|dbj|BAM20999.1| proteasome subunit beta type-8, partial [Polypterus senegalus]
Length = 226
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L SG D V + + ++ +Y+ RN +T +AA+ LA R + +
Sbjct: 64 LGTMSGSAADCVYWERVLAQHCRIYKLRNKEEITVSAASKLLSNMLA-GYRGMGLSIGSM 122
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G+DK+ GP LYY+D T + + G G ++ +MD ++V EA DL +
Sbjct: 123 ICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGHSYAYGVMDSGHRYDLTVPEAYDLAQRA 181
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDG 151
I R + + V +DG
Sbjct: 182 IYHATHRDAYSGGTVNMYHVKQDG 205
>gi|407849166|gb|EKG04000.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
Length = 311
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + L++ RN ++ AAA+ + + R
Sbjct: 147 INEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAASKIL-ANITYSYRNYGL 205
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG+D + GPSLYY+D T K + + G GS ++ ++D+ + ++VEEA +
Sbjct: 206 SMGTMVAGWD-QFGPSLYYVDDKGTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACE 264
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 265 LARRSIFHATYR 276
>gi|71418280|ref|XP_810804.1| proteasome beta 5 subunit [Trypanosoma cruzi strain CL Brener]
gi|70875393|gb|EAN88953.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
Length = 311
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + L++ RN ++ AAA+ + + R
Sbjct: 147 INEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAASKIL-ANITYSYRNYGL 205
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG+D + GPSLYY+D T K + + G GS ++ ++D+ + ++VEEA +
Sbjct: 206 SMGTMVAGWD-QFGPSLYYVDDKGTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACE 264
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 265 LARRSIFHATYR 276
>gi|428673094|gb|EKX74007.1| proteasome beta 5 subunit, putative [Babesia equi]
Length = 264
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++S+ L +G D + + K L++ RN ++ AA+ + R
Sbjct: 92 INSYLLGTMAGGAADCSYWERHLAKLCRLHELRNQSRISVGAASQLL-ANIFFYFRGYGL 150
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
++AG+D + GP LYY+ K + G GS F+ ++D+H+ S MS+EEAV+
Sbjct: 151 SAGTMIAGHDAK-GPHLYYVSSEGERLKGRLFSVGSGSLFAYGVIDQHYRSDMSLEEAVE 209
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
L + I + R + + V KDG
Sbjct: 210 LATRAIYQAAHRDGFSGGAVNLYHVHKDG 238
>gi|312372646|gb|EFR20567.1| hypothetical protein AND_19880 [Anopheles darlingi]
Length = 257
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D V + + K +Y+ RN ++ AAA+ + +
Sbjct: 81 INDYLLGTLAGGAADCVYWDRVLAKECRIYELRNKERISVAAASKIMS-NIVYYYKGMGL 139
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++LAGYDK GP LYYID T + G GS ++ ++D +H ++ EEA D
Sbjct: 140 SMGMMLAGYDKR-GPQLYYIDSEGTRTPGKVFSVGSGSIYAYGVLDSGYHWDLTDEEAQD 198
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 199 LGRRAIYHATHR 210
>gi|71416085|ref|XP_810086.1| proteasome beta 5 subunit [Trypanosoma cruzi strain CL Brener]
gi|70874567|gb|EAN88235.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
Length = 311
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + L++ RN ++ AAA+ + + R
Sbjct: 147 INEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAASKIL-ANITYSYRNYGL 205
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG+D + GPSLYY+D T K + + G GS ++ ++D+ + ++VEEA +
Sbjct: 206 SMGTMVAGWD-QFGPSLYYVDDKGTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACE 264
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 265 LARRSIFHATYR 276
>gi|453087403|gb|EMF15444.1| 20S proteasome alpha subunit E [Mycosphaerella populorum SO2202]
Length = 245
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQF----RNGIPLTTAA----AANFTRG-EL 53
+D H A SG D E + ++F R + T A A F G E
Sbjct: 70 IDRHIGCAMSGLQADARSMVEHARVTSQSHEFHYNERLSVESCTQAICDLALRFGEGAEG 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + + FH
Sbjct: 130 EESIMSRPFGVALLIAGYD-ENGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHK 188
Query: 114 GMSVEEAVDLVDKCILEI 131
+++ EA +LV K + ++
Sbjct: 189 SLTLPEAEELVLKTLKQV 206
>gi|224119566|ref|XP_002331192.1| predicted protein [Populus trichocarpa]
gi|222873313|gb|EEF10444.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-EHGPSLYYTDPSGTFWQCNAKAIGSGSEGADSTLQEQYN 184
Query: 113 SGMSVEEA 120
++++EA
Sbjct: 185 KDLTLKEA 192
>gi|257075968|ref|ZP_05570329.1| proteasome beta subunit [Ferroplasma acidarmanus fer1]
Length = 210
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS-- 60
+D++ + +G GD +++ + LY+ + I + AAA L+ L +S
Sbjct: 44 IDTYAGMTIAGLVGDAQVLVRYMRAEMELYRVQRKINMPIEAAATL----LSNMLNQSKY 99
Query: 61 -PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PYMV +L+ G+DK+ P ++ ID + + A+ G GS F +++ + M +++
Sbjct: 100 YPYMVQLLVGGFDKK--PHIFSIDAAGGSVEDEYASTGSGSPFVYGVLEAEYQPNMKLDD 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESV 161
A++L K I + R + I ++D + Y + +
Sbjct: 158 AINLAIKAISVAKQRDSASGNMLQIGVIDPEKGFNYLSEDDI 199
>gi|148229628|ref|NP_001080028.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
gi|37589390|gb|AAH59335.1| MGC69086 protein [Xenopus laevis]
Length = 271
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LYQ RN ++ ++A+ + R S
Sbjct: 103 INPYLLGTMSGSAADCQHWERLLAKECRLYQLRNNSRISVSSASKLL-CNMMLQYRGSGL 161
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DK+ GP LYY+D T D + G G+ ++ +MD + ++ EEA D
Sbjct: 162 SVGSMICGWDKK-GPGLYYVDDNGTRLCGDIFSTGSGNSYAYGVMDSGYRFDLTPEEAYD 220
Query: 123 LVDKCI 128
L + I
Sbjct: 221 LGRRAI 226
>gi|305664308|ref|YP_003860596.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304378877|gb|ADM28716.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
aggregans DSM 17230]
Length = 200
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Query: 6 HKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVN 65
H +IAA+G D + I + + + + AAA L + + P++
Sbjct: 49 HMVIAAAGLFADMQSLSRIISAEIMYRELLSSSKMRVRAAAKLLSAILYS-YKLMPFLSE 107
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I+ AG+D+E G LY +D + ++ + D AA G G+ ++ +++ + + +++++A +L
Sbjct: 108 IIFAGFDEE-GYHLYVLDPVGSIIEDDYAAIGTGASIAIGVIESEYKNTLTIDQATELAI 166
Query: 126 KCILEIRSRLVVAPPNFVIKIVDKDGARE 154
K + SR V+ I +V +G E
Sbjct: 167 KSVKAAISRDAVSGDGIDIAVVTNNGINE 195
>gi|70606695|ref|YP_255565.1| proteasome beta subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066918|ref|YP_007434000.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449069190|ref|YP_007436271.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
gi|121725055|sp|Q4JAA8.1|PSB2_SULAC RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|68567343|gb|AAY80272.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius DSM
639]
gi|449035426|gb|AGE70852.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449037698|gb|AGE73123.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
Length = 203
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 23 EFIQKNVSLYQFRNGI----PLTTAAAANFTRGELATALRKS---PYMVNILLAGYDKET 75
+FI + + RN I P+T A + LA L S PY+V IL+ G D +
Sbjct: 63 QFIYEALKYIYHRNSITGEGPITVKGIATW----LANVLSSSKYFPYLVQILIGGVDDQ- 117
Query: 76 GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRL 135
P LY +DY+ + + + A G GS +L +++ ++ MS++EA +L + I R
Sbjct: 118 -PRLYNLDYLGDITEEEYTATGSGSPEALGVLEDNYKPEMSLDEAAELAKRAIFSSIKRD 176
Query: 136 VVAPPNFVIKIVDKDGARE 154
++ + K+G E
Sbjct: 177 SFTGTGVIVTKITKNGHEE 195
>gi|156086830|ref|XP_001610822.1| proteasome epsilon subunit [Babesia bovis T2Bo]
gi|154798075|gb|EDO07254.1| proteasome epsilon subunit , putative [Babesia bovis]
Length = 268
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++S+ L +G D + + K L++ RN +T A A+ + R
Sbjct: 93 INSYLLGTMAGGAADCTYWERHVAKLCRLHELRNQERITVAHASQIL-ANIFFYFRGYGL 151
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
++AG+DK GP L+Y+ + G GS F+ ++D+H+ S M+++EAV+
Sbjct: 152 SAGTMIAGWDKNKGPELFYVSDKGERVSGKLFSVGSGSLFAYGVIDQHYRSDMTLDEAVE 211
Query: 123 LVDKCILEIRSR 134
L + I + R
Sbjct: 212 LGKRAIYQAAHR 223
>gi|164658982|ref|XP_001730616.1| hypothetical protein MGL_2412 [Malassezia globosa CBS 7966]
gi|159104512|gb|EDP43402.1| hypothetical protein MGL_2412 [Malassezia globosa CBS 7966]
Length = 295
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + ++ L++ RN ++ AAA+ L + +
Sbjct: 98 INPYLLGTMAGGAADCQYWETYLGIQCRLHELRNKERISVAAASKILS-NLVYSYKGMGL 156
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK +GP++YY+D + K D + G GS F+ ++D+ +H +S EEA+D
Sbjct: 157 SMGTMICGWDK-SGPAIYYVDSEGSRMKGDLFSVGSGSTFAYGVLDQGYHWDLSEEEALD 215
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 216 LGRRSIYAATHR 227
>gi|90076164|dbj|BAE87762.1| unnamed protein product [Macaca fascicularis]
Length = 263
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 12/137 (8%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G DR + + + +Y+ RN ++ AAA+ LA + +
Sbjct: 96 INPYLLGTMAGGAADRSFWERLLARQCRIYELRNKERISVAAASKL----LANMVYQYKG 151
Query: 63 M---VNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSV 117
M + ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + V
Sbjct: 152 MGLSMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEV 208
Query: 118 EEAVDLVDKCILEIRSR 134
E+A DL + I + R
Sbjct: 209 EQAYDLARRAIYQATYR 225
>gi|357156162|ref|XP_003577362.1| PREDICTED: proteasome subunit alpha type-5-like [Brachypodium
distachyon]
Length = 237
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHVGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
+++ EA + + IL+ V P N I V
Sbjct: 185 KELTLAEA-ETIALSILKQVMEEKVTPNNVDIAKV 218
>gi|347522768|ref|YP_004780338.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459650|gb|AEM38086.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 209
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 58 RKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSV 117
R PY+V +LL GYD T P L+ ID++ T+ + A G GS ++ +++ + M V
Sbjct: 109 RMYPYIVQLLLGGYD--TAPRLFNIDWLGTVTEEKYTATGSGSPIAIGVIESGYREDMKV 166
Query: 118 EEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG--AREYAWR 158
+EAV+L K + R V + I+ K REY R
Sbjct: 167 DEAVELAVKAVRAAMERDVATGNGIDVVIIGKGTFITREYPPR 209
>gi|159041872|ref|YP_001541124.1| proteasome endopeptidase complex protein [Caldivirga maquilingensis
IC-167]
gi|302595705|sp|A8M8R5.1|PSB2_CALMQ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|157920707|gb|ABW02134.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
Length = 200
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
+A+SG D T+ I+ N++ + P++ AAA L+ L ++ PY+
Sbjct: 52 LASSGILADIQTITKVIRANIANMEIEMKRPVSVRAAAKL----LSIMLFQNKYMPYIAE 107
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
++ G D+E GP L+ +D +L + D AA G G+ ++ +++ + S ++V+EA +L
Sbjct: 108 TMVGGIDEE-GPKLFILDSWGSLIEDDFAALGNGARTAIGLIETGYSSSITVKEAKELAI 166
Query: 126 KCILEIRSR 134
K I E +R
Sbjct: 167 KAIKEAIAR 175
>gi|390461498|ref|XP_002746454.2| PREDICTED: proteasome subunit beta type-8 [Callithrix jacchus]
Length = 401
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLL-SNMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCI 128
L + I
Sbjct: 227 LARRAI 232
>gi|403268779|ref|XP_003926444.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 276
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 227 LGRRAIVHATHR 238
>gi|296415892|ref|XP_002837618.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633494|emb|CAZ81809.1| unnamed protein product [Tuber melanosporum]
Length = 245
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRG-EL 53
+D H A SG D E + + F PL + A F G +
Sbjct: 70 IDRHLGCAMSGLQADARSMIEHARVEAQNHSFHYNEPLRVESCTQAICDLALRFGEGADG 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GP LY+ + T ++ D A G GS + + + +HS
Sbjct: 130 EESIMSRPFGVALLIAGYD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHS 188
Query: 114 GMSVEEAVDLVDKCILEI 131
+++EEA LV K + ++
Sbjct: 189 SLTLEEAETLVLKTLKQV 206
>gi|448456459|ref|ZP_21595228.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
gi|445811935|gb|EMA61932.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
Length = 243
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 25 IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYDKETGPSLYYID 83
++ SLY+ R G ++ A + T G L LR Y+V +L G D E G +Y ID
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLT-GNL---LRSGAFYIVQPILGGVDDE-GAHIYSID 162
Query: 84 YIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
+ + + G GS ++L ++++ +H ++V+EA ++ K I R + +
Sbjct: 163 ALGGTTEEEYTVTGSGSQYALGVLEQEYHDEVTVDEATEIAAKAIQSAVERDLASGNGIN 222
Query: 144 IKIVDKDGAREYAWRE 159
+ +V DG ++E
Sbjct: 223 VAVVTDDGVDITRYKE 238
>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
okinawensis IH1]
Length = 220
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D + + +G GD I +Y+ R G + + A L R P+
Sbjct: 50 IDDYIAMTIAGSVGDAQSLVRMISAETKIYKMRTGNNMPPHSCATLLSNILH-GNRHFPF 108
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDK-AAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
+ +++ GYD GP L+ +D + L++ + G GS +L +++ + M++ +
Sbjct: 109 LTQLIIGGYDNLHGPKLFSLDPVGGLNEETSFTSTGSGSPTALGVLEAEYKKDMTINKGK 168
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+L K ++ R + + ++D++G + Y+ E
Sbjct: 169 ELAVKALISAMERDAYSGNGISLAVIDENGVKIYSDEE 206
>gi|406866686|gb|EKD19725.1| 20S proteasome alpha subunit E [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 245
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRG-EL 53
+D H A SG D E + + F PL + A F G +
Sbjct: 70 IDRHIGCAMSGLQADARSMVEHARVESQNHAFHYNEPLRVESCTQAICDLALRFGEGADG 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GP LY+ + T ++ D A G GS + + + FH
Sbjct: 130 EESIMSRPFGVALLIAGYD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHK 188
Query: 114 GMSVEEAVDLVDKCILEI 131
+++EEA LV K + ++
Sbjct: 189 SLTIEEAETLVLKTLKQV 206
>gi|403213903|emb|CCK68405.1| hypothetical protein KNAG_0A07520 [Kazachstania naganishii CBS
8797]
Length = 287
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ LY+ + +T AAA+ L + + + ++ GY K+ GP
Sbjct: 127 CQFWETWLGSQCRLYELKEKQRITVAAASKIL-ANLVYQYKGAGLSMGTMICGYTKKEGP 185
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSR 134
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 186 TVYYVDSDGTRLKGDVFCVGSGQTFAYGVLDTNYKWDLSVEDALYLGKRAILAATHR 242
>gi|118781366|ref|XP_559226.2| AGAP010718-PA [Anopheles gambiae str. PEST]
gi|116130136|gb|EAL41084.2| AGAP010718-PA [Anopheles gambiae str. PEST]
Length = 284
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D V + + K +Y+ RN ++ AAA+ + +
Sbjct: 110 INDYLLGTLAGGAADCVYWDRVLAKECRIYELRNKERISVAAASKIMS-NIVYYYKGMGL 168
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++LAGYDK GP LYYID T + G GS ++ ++D +H ++ EEA D
Sbjct: 169 SMGMMLAGYDKR-GPQLYYIDSEGTRTPGKVFSVGSGSIYAYGVLDSGYHWDLTDEEAQD 227
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 228 LGRRAIYHATHR 239
>gi|397474367|ref|XP_003808653.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Pan paniscus]
Length = 276
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDQHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCI 128
L + I
Sbjct: 227 LGRRAI 232
>gi|168022987|ref|XP_001764020.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684759|gb|EDQ71159.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTE-----------FIQKNVSLYQFRNGIPLTTAA----A 45
M +D H A SG D E +Q + Y + TT A A
Sbjct: 64 MEIDEHIGCAMSGLTADARTLVEHGRVYHDPACLVLQNHRFSYNEPMSVESTTQALCDLA 123
Query: 46 ANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLS 105
F G+ + R P+ V++L+AG+D E+GP LY+ D T + D A G GS + +
Sbjct: 124 LRFGEGDEESMSR--PFGVSLLIAGHD-ESGPCLYHTDPSGTFWQCDAKAIGSGSEGADT 180
Query: 106 MMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDK 149
+ HF+ M++EEA L + ++ V + + K+ K
Sbjct: 181 SLQEHFNKNMTLEEAETLALSTLKQVMEEKVTSSNVDIAKVAPK 224
>gi|397474369|ref|XP_003808654.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Pan paniscus]
Length = 272
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 105 INPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 164 SMGSMICGWDKK-GPGLYYVDQHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 222
Query: 123 LVDKCI 128
L + I
Sbjct: 223 LGRRAI 228
>gi|440290998|gb|ELP84297.1| proteasome subunit beta type-3, putative [Entamoeba invadens IP1]
Length = 265
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
L+ H L+ G D E I+ + +LY+ R G P+ + N T L + R +PY
Sbjct: 47 LNEHCLVGGCGVYADVQTVFEQIKYDANLYKLREGRPIGPSQLVNAT-AHLLFSKRFNPY 105
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
++ ++ G+D DYI AA G G ++ + D + M EE V+
Sbjct: 106 YMSPIIIGFDDNGKTYCSSYDYIGAPGDYRFAAVGTGCNEAMGVCDSFYKEDMEPEELVE 165
Query: 123 LVDKCILEIRSR 134
+ +C+L +R
Sbjct: 166 TIGQCLLAGENR 177
>gi|219851431|ref|YP_002465863.1| proteasome beta-type subunit [Methanosphaerula palustris E1-9c]
gi|302595895|sp|B8GG66.1|PSB_METPE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|219545690|gb|ACL16140.1| Proteasome, beta-type subunit, conserved site [Methanosphaerula
palustris E1-9c]
Length = 211
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD Q + +LYQ R G ++ A++ L R PY V +L+
Sbjct: 52 MTTAGGVGDAQQLARIMSVECNLYQIRRGRSISVGASSTLLSNYL-NQNRGYPYYVQLLV 110
Query: 69 AGYDKETGPSLYYIDYIA-TLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G D TGPS+Y +D + + D A G GS + +++ + ++ +EA++L +
Sbjct: 111 GGVDA-TGPSVYSVDAMGGATRESDIVATGSGSPMAYGVLEDRYKKDLTEDEAIELAIRA 169
Query: 128 ILEIRSRLVVAPPNFVIKIVDKD 150
+ R + + I+ KD
Sbjct: 170 LRAAMRRDSASGEGIHVVIITKD 192
>gi|403173929|ref|XP_003332961.2| 20S proteasome subunit beta 5 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170757|gb|EFP88542.2| 20S proteasome subunit beta 5 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 289
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L +G D + ++ L++ RN ++ AAA+ + L + + + +
Sbjct: 116 LGTMAGGAADCQYWETYLGIQCRLHELRNKSRISVAAASKYLS-NLVYSYKGMGLSMGTM 174
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G+D GP LYY+D T K D + G GS F+ ++D+ +H +SV++A++L +
Sbjct: 175 ICGWDG-AGPGLYYVDSDGTRLKGDVFSVGSGSTFAYGVLDQGYHWDLSVDDALELGRRS 233
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDG 151
I R + + V +DG
Sbjct: 234 IYAAGHRDAFSGNTLNLYHVKEDG 257
>gi|302807096|ref|XP_002985279.1| hypothetical protein SELMODRAFT_181529 [Selaginella moellendorffii]
gi|300147107|gb|EFJ13773.1| hypothetical protein SELMODRAFT_181529 [Selaginella moellendorffii]
Length = 237
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAA----AANFTRGE 52
M +D+H A SG D E + ++F P+ TT A A F G+
Sbjct: 68 MEIDTHIGCAMSGLIADARTLVEHARNETQHHRFSYNEPMSVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GP LY+ D T + D A G GS + + + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-EKGPCLYHTDPSGTFWQCDAKAIGSGSEGADTSLQESYN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVA 138
M++EEA L + ++ V A
Sbjct: 185 KEMTLEEAETLALSTLKQVMEEKVTA 210
>gi|307596440|ref|YP_003902757.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307551641|gb|ADN51706.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 216
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D+H SG D + + + Y+ G P++ A AN+ + + R Y
Sbjct: 53 IDNHVAATMSGGVADLQKVLDALTATAIQYKIETGKPISIRALANYAS-LIVFSSRPFIY 111
Query: 63 MVNILLAGYDKETGPSLYYIDYIATL-HKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
+V+++ G+D + GP +Y +D+ TL + + A G GS + +++ + MS+E+A+
Sbjct: 112 LVHMIFGGWDPDEGPVIYMLDFFGTLTRETEFMATGSGSPTAFGVLEDGYRRDMSIEDAI 171
Query: 122 DLVDKCI 128
L + +
Sbjct: 172 RLAVRAV 178
>gi|302773341|ref|XP_002970088.1| hypothetical protein SELMODRAFT_267349 [Selaginella moellendorffii]
gi|300162599|gb|EFJ29212.1| hypothetical protein SELMODRAFT_267349 [Selaginella moellendorffii]
Length = 237
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAA----AANFTRGE 52
M +D+H A SG D E + ++F P+ TT A A F G+
Sbjct: 68 MEIDTHIGCAMSGLIADARTLVEHARNETQHHRFSYNEPMSVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GP LY+ D T + D A G GS + + + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-EKGPCLYHTDPSGTFWQCDAKAIGSGSEGADTSLQESYN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVA 138
M++EEA L + ++ V A
Sbjct: 185 KEMTLEEAETLALSTLKQVMEEKVTA 210
>gi|224001200|ref|XP_002290272.1| proteasome subunit beta type 5 precursor [Thalassiosira pseudonana
CCMP1335]
gi|220973694|gb|EED92024.1| proteasome subunit beta type 5 precursor [Thalassiosira pseudonana
CCMP1335]
Length = 276
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Query: 24 FIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSL 79
F ++N+ LY+ RN +T A+A+ +++ R + ++ G+D ETGP L
Sbjct: 120 FWERNLGMQCRLYELRNKKRITVASASKLLANTMSS-YRGYGLSMGTMITGWD-ETGPQL 177
Query: 80 YYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAP 139
YY+D T + G GS ++ ++D ++ ++VEEA+DL + I R ++
Sbjct: 178 YYVDDDGTRLHGRYFSVGSGSTYAYGVLDTYYRPDLTVEEAIDLGKRAIYHACHRDAMSG 237
Query: 140 PNFVIKIVDKDG 151
+ V KDG
Sbjct: 238 SINNLYHVTKDG 249
>gi|196259781|ref|NP_001124502.1| proteasome subunit beta type-8 [Ovis aries]
gi|193245504|gb|ACF16970.1| HA2B [Ovis aries]
Length = 276
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ + +MD + +S+EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 227 LGRRAIVHATHR 238
>gi|432094632|gb|ELK26138.1| Proteasome subunit beta type-8 [Myotis davidii]
Length = 289
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 122 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 180
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + G G+ ++ +MD + +S+EEA D
Sbjct: 181 SMGSMICGWDKK-GPGLYYVDENGTRLSGSMFSTGSGNSYAYGVMDSGYRPDLSLEEAYD 239
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 240 LGRRAIVHATHR 251
>gi|237842737|ref|XP_002370666.1| proteasome subunit beta type 5, putative [Toxoplasma gondii ME49]
gi|211968330|gb|EEB03526.1| proteasome subunit beta type 5, putative [Toxoplasma gondii ME49]
gi|221485637|gb|EEE23918.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
gi|221502989|gb|EEE28699.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 309
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 29 VSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYD-KETGPSLYYIDYIAT 87
L++ RNG P+ AAA+N + R ++AG++ K+ P LY++D AT
Sbjct: 159 CKLFKLRNGEPIPVAAASNML-ANIFFHWRGYGLCCGTMIAGWNEKDEKPELYFVDDKAT 217
Query: 88 LHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSR 134
K D + G GS ++ ++D + M+ EEAV+L + I + R
Sbjct: 218 RLKGDLFSCGSGSTYAYGVLDNEYKWDMTDEEAVELGKRAIYQAAHR 264
>gi|114606757|ref|XP_001167272.1| PREDICTED: proteasome subunit beta type-8 isoform 3 [Pan
troglodytes]
gi|410220158|gb|JAA07298.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410257298|gb|JAA16616.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410287540|gb|JAA22370.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410332767|gb|JAA35330.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
Length = 276
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCI 128
L + I
Sbjct: 227 LGRRAI 232
>gi|385301310|gb|EIF45509.1| proteasome component pup2 [Dekkera bruxellensis AWRI1499]
Length = 265
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 51 GELATALRK---SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMM 107
GE A+ ++ P+ V +L+AGYD+E GP LY+++ T ++ D A G GS + + +
Sbjct: 124 GEGASGXKRLMSRPFGVALLVAGYDEEKGPQLYHVEPSGTFYRYDAKAIGSGSEGAQAEL 183
Query: 108 DRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGA-REYAWRESVK 162
+H +++ +A L K + ++ + + N I V KDG R Y+ E K
Sbjct: 184 QNEYHKSLTLNDAELLSLKVLKQVMEEKLDS-KNAQIASVTKDGGFRIYSESELAK 238
>gi|410672077|ref|YP_006924448.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
gi|409171205|gb|AFV25080.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
Length = 210
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLT----TAAAANFTRGELATALR 58
+D + +G GD Q I LY+ R +T T +N G+ R
Sbjct: 46 IDDFAAMTTAGSVGDAQQIVRIISVESKLYKMRRKESMTIKGLTTMLSNLLSGQ-----R 100
Query: 59 KSPYMVNILLAGYDKETGPSLYYIDYI-ATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSV 117
P MV +L+ GYDK GP LY ID + + + A G GS + +++ + M+
Sbjct: 101 YYPLMVQLLVGGYDKH-GPELYSIDALGGNIDEKRVVATGSGSPIAYGVLEDRYKENMTT 159
Query: 118 EEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKD 150
+E V+L + + R + + I+ KD
Sbjct: 160 QEGVELAVRALHNAMKRDSASGDGIDVVIITKD 192
>gi|302413898|ref|XP_003004781.1| proteasome component PUP2 [Verticillium albo-atrum VaMs.102]
gi|261355850|gb|EEY18278.1| proteasome component PUP2 [Verticillium albo-atrum VaMs.102]
Length = 243
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 10/166 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAAN--------FTRG-EL 53
+D H A SG D E + + F PL +A F G +
Sbjct: 68 IDRHIGCAMSGLQADARSMVEHARVESQSHTFNYAEPLRVESATQAICDLALRFGEGADG 127
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
+ P+ V +L+AGYD E GP LY+ + AT ++ D A G GS + + + +H
Sbjct: 128 EETIMSRPFGVALLIAGYD-EDGPQLYHAEPSATFYRYDAKAIGSGSEGAQAELQNEYHK 186
Query: 114 GMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+++E+A LV K + ++ + + + + + G R Y E
Sbjct: 187 SLTIEDAETLVLKTLKQVMEEKLDSKNVQLASVTKEKGFRIYTDEE 232
>gi|18250329|gb|AAL60589.1| proteosome subunit LMP7/PSMB8 [Oncorhynchus mykiss]
Length = 168
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L SG D + + K LY+ RN ++ +AA+ + R + +
Sbjct: 6 LGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLL-CNMMLGYRGMGLSMGSM 64
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G+D + GP LYY+D AT + G GS ++ +MD +H M+VEEA +L +
Sbjct: 65 IVGWDNK-GPGLYYVDDNATRLSGRMFSTGCGSSYAYGVMDSGYHEDMTVEEAYELGRRG 123
Query: 128 ILEIRSR 134
I R
Sbjct: 124 ITHATHR 130
>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
gi|74559570|sp|Q8TW10.1|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 210
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRK-SPYMVNIL 67
+ +G D + + ++ LY+ R+ ++ A AN L ++L+ PY+V ++
Sbjct: 53 VTTAGSVADAQKIVDLMRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLI 112
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G++ + P+LY +D ++ + D A G GS + +++ + GMS+++A+++ +
Sbjct: 113 VGGFNDDD-PALYNLDPSGSIIEEDYTATGSGSPTAYGVLEAEYEEGMSLDDAIEVAVRA 171
Query: 128 ILEIRSRLVVAPPNF-VIKIVDKDGAREYAWRESVK 162
+ R V+ I ++G RE E K
Sbjct: 172 VKSALERDTGTGEGVTVVTITREEGYRELPEEEVEK 207
>gi|379005397|ref|YP_005261069.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
gi|375160850|gb|AFA40462.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
Length = 202
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLY--QFRNGIPLTTAAAANFTRGELATALRKS 60
+D H SG D F+ Y QFR IP+ A N+ L + R
Sbjct: 38 IDDHVAATMSGGVADLQNILSFLTVRAREYKTQFRRPIPIR--ALVNYMSLILFYS-RPY 94
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y+V+ ++ G D+E G +Y +D++ T+ K A G GS ++ +++ + ++VEEA
Sbjct: 95 VYVVHSIIGGVDEEEGAVMYMVDWLGTVTKEKYVATGSGSPYAKGVLEVGYRGDLTVEEA 154
Query: 121 VDLVDKCI 128
VDL I
Sbjct: 155 VDLAINAI 162
>gi|971309|dbj|BAA07954.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
Length = 271
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LYQ RN ++ ++A+ + R S
Sbjct: 103 INPYLLGTMSGSAADCQHWERLLAKECRLYQLRNNSRISVSSASKLLC-NMMLQYRGSGL 161
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DK+ GP LYY+D T D + G G+ ++ +MD + ++ EEA D
Sbjct: 162 SVGSMICGWDKK-GPGLYYVDDNGTRLCGDIFSTGSGNSYAYGVMDSGYRFDLTPEEAYD 220
Query: 123 L 123
L
Sbjct: 221 L 221
>gi|255725804|ref|XP_002547828.1| proteasome component PRE3 precursor [Candida tropicalis MYA-3404]
gi|240133752|gb|EER33307.1| proteasome component PRE3 precursor [Candida tropicalis MYA-3404]
Length = 212
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 12 SGEPGDRVQFTEFIQKNVSLY--QFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLA 69
SG D + ++ + LY Q NG T AAN + EL K I++A
Sbjct: 65 SGSAADTQAIADIVKYYLQLYSSQLPNGEQPETKIAANVFQ-ELCYN-NKDNLTAGIIVA 122
Query: 70 GYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
GYDK+T S++ + ++H+ + A G GS + + D++F SGMS E+AV+ V + +
Sbjct: 123 GYDKKTDSGSVFSVPIGGSIHESEYAIVGSGSTYIYGLCDKNFKSGMSKEDAVEFVIQAL 182
Query: 129 LEIR---------SRLVVAPPNFV 143
E + +R+++A V
Sbjct: 183 TEAKKFDGSSGGVTRMIIATSEGV 206
>gi|393794893|ref|ZP_10378257.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 210
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H + +G D + ++ + +L++ P++ + A + R P+
Sbjct: 49 IDEHAGLTLAGGVADAQNIVDILRYHSNLHRVEKQGPISIHSLARLCS-LIFHQNRGYPF 107
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
M +IL+ GYD GP+L+ ID ++ K G GS + +++ + ++VEEA
Sbjct: 108 MADILVGGYDA-NGPALFNIDMFGSVEKKSYVTTGSGSPVAYGLLEEEYRPDLTVEEAKK 166
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ + + R + I ++DKDG R
Sbjct: 167 IALRAVKAAIVRNIGTGDGINIAVMDKDGFR 197
>gi|340057211|emb|CCC51553.1| putative proteasome beta 5 subunit, fragment [Trypanosoma vivax
Y486]
Length = 292
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + L++ RN ++ AAA+ + + R
Sbjct: 128 INEYLLGTMAGGAADCQYWQRVLGMECRLWELRNNSRISVAAASRIL-ANITYSYRNYGL 186
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG+D GPSLYY+D T K + + G GS ++ ++D+ + ++VEEA D
Sbjct: 187 SMGTMVAGWD-HFGPSLYYVDDKGTRVKHELFSVGSGSIYAYGVLDQGYRKDLTVEEACD 245
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 246 LARRSIFHATYR 257
>gi|378732712|gb|EHY59171.1| proteasome component PUP2 [Exophiala dermatitidis NIH/UT8656]
Length = 246
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEF--IQKNVSLYQFRN--GIPLTTAA----AANFTRG-EL 53
+D H A SG D E I+ + F G+ T A A F G +
Sbjct: 70 IDRHIGCAMSGLQADARSMIEHARIESQNHAFNFNEKLGVESCTQAICDLALRFGEGAQG 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AG+D++ GP LY+ + T ++ D A G GS + + + +H
Sbjct: 130 EESIMSRPFGVALLIAGWDEDNGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQSEYHR 189
Query: 114 GMSVEEAVDLVDKCILEI 131
+++EEA LV K + ++
Sbjct: 190 SLTLEEAETLVLKTLKQV 207
>gi|145590322|ref|YP_001152324.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595706|sp|A4WH05.1|PSB1_PYRAR RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145282090|gb|ABP49672.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum arsenaticum
DSM 13514]
Length = 202
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLY--QFRNGIPLTTAAAANFTRGELATALRKS 60
+D H SG D F+ Y QFR IP+ A N+ L + R
Sbjct: 38 IDDHVAATMSGGVADLQNILSFLTVRAREYKTQFRRPIPIR--ALVNYMSLILFYS-RPY 94
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
Y+V+ ++ G D+E G +Y +D++ T+ K A G GS ++ +++ + ++VEEA
Sbjct: 95 VYVVHSIIGGVDEEEGAVMYMVDWLGTVTKEKYVATGSGSPYAKGVLEVGYRGDLTVEEA 154
Query: 121 VDLVDKCI 128
VDL I
Sbjct: 155 VDLAINAI 162
>gi|344298836|ref|XP_003421097.1| PREDICTED: proteasome subunit beta type-8-like [Loxodonta africana]
Length = 276
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDDSGTRLSGSMFSTGSGNPYAYGVMDSGYQPNLSPEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 227 LARRAIAHATHR 238
>gi|441594219|ref|XP_003272205.2| PREDICTED: proteasome subunit beta type-8 isoform 1 [Nomascus
leucogenys]
Length = 276
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SIGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCI 128
L + I
Sbjct: 227 LGRRAI 232
>gi|147899854|ref|NP_001084323.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Xenopus laevis]
gi|971307|dbj|BAA07945.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
gi|38014491|gb|AAH60388.1| PSMB8 protein [Xenopus laevis]
Length = 271
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LYQ RN ++ +AA+ + R +
Sbjct: 103 INPYLLGTMSGSAADCQYWERLLAKECRLYQLRNNSRISVSAASKLM-CNMMLQYRGTGL 161
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DK+ GP LYY+D T D + G G+ ++ +MD + ++ EEA D
Sbjct: 162 SVGSMICGWDKK-GPGLYYVDDNGTRLCGDIFSTGSGNSYAYGVMDSGYRFDLTPEEAYD 220
Query: 123 LVDKCI 128
L + I
Sbjct: 221 LGRRAI 226
>gi|255584432|ref|XP_002532947.1| proteasome subunit alpha type, putative [Ricinus communis]
gi|223527276|gb|EEF29431.1| proteasome subunit alpha type, putative [Ricinus communis]
Length = 237
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 128 EDSMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDK 149
+++ EA + + IL+ V P N I V K
Sbjct: 185 KDITLLEA-ETIALSILKQVMEEKVTPNNVDIARVAK 220
>gi|329766105|ref|ZP_08257664.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329137376|gb|EGG41653.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 167
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H + +G D + ++ + +L++ P++ + A + R P+
Sbjct: 6 IDEHAGLTLAGGVADAQNIVDILRYHSNLHRVEKQGPISIHSLARLCS-LIFHQNRGYPF 64
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
M +IL+ GYD GP+L+ ID ++ K G GS + +++ + ++VEEA
Sbjct: 65 MADILVGGYDA-NGPALFNIDMFGSVEKKSYVTTGSGSPVAYGLLEEEYRPDLTVEEAKK 123
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+ + + R + I ++DKDG R
Sbjct: 124 VALRAVKAAIVRNIGTGDGINIAVMDKDGFR 154
>gi|114606761|ref|XP_001167241.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Pan
troglodytes]
gi|410220160|gb|JAA07299.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410257296|gb|JAA16615.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410287542|gb|JAA22371.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410332769|gb|JAA35331.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
Length = 272
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 105 INPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 164 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 222
Query: 123 LVDKCI 128
L + I
Sbjct: 223 LGRRAI 228
>gi|393220434|gb|EJD05920.1| N-terminal nucleophile aminohydrolase [Fomitiporia mediterranea
MF3/22]
Length = 307
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ RN ++ AAA+ + L + + + + ++ G+DK TGP
Sbjct: 133 CQFWETYLGMQCRLHELRNHERISVAAASKYLC-NLVYSYKGTGLSMGTMICGWDK-TGP 190
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
+++Y+D K D + G GS F+ ++D+ +H ++ +EA++L + I R
Sbjct: 191 AVFYVDSDGQRLKGDLFSVGSGSTFAYGVLDQGYHWDLTDDEAIELGRRSIYAAGHRDAF 250
Query: 138 APPNFVIKIVDKDG 151
+ + V +DG
Sbjct: 251 SGNTINVYHVKEDG 264
>gi|83035093|ref|NP_001032701.1| proteasome subunit beta type-5 precursor [Bos taurus]
gi|122138604|sp|Q32KL2.1|PSB5_BOVIN RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
gi|81673887|gb|AAI10040.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Bos taurus]
gi|296483649|tpg|DAA25764.1| TPA: proteasome subunit beta type-5 precursor [Bos taurus]
Length = 263
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + VEEA
Sbjct: 155 SMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEEA 211
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DL + I + R + + + V +DG
Sbjct: 212 YDLARRAIYQATYRDAYSGGSVSLYHVREDG 242
>gi|348540002|ref|XP_003457477.1| PREDICTED: proteasome subunit beta type-11-like [Oreochromis
niloticus]
Length = 224
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+ SH ++ +SG D + + + + + LYQ R+G L+ A A L + +
Sbjct: 49 IHSHLVVTSSGSGADCMLWERILIREIRLYQLRHGHRLSIRATAKLLSSML-HPFKGTEM 107
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V + L G+DK GP L Y+ + D + G GS ++ ++DR +S EA+
Sbjct: 108 CVALTLCGWDKR-GPKLIYVCSDGARLQGDVFSVGSGSPYAYGVLDRELRWSLSKGEAIS 166
Query: 123 LVDKCILEIRSR 134
L + + R
Sbjct: 167 LAREAVFRATHR 178
>gi|336267810|ref|XP_003348670.1| hypothetical protein SMAC_01694 [Sordaria macrospora k-hell]
gi|380093927|emb|CCC08144.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 245
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + + +H +++E+A
Sbjct: 137 PFGVALLIAGYD-EDGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLTIEDA 195
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
LV K + ++ + A + + + G R Y E
Sbjct: 196 ETLVLKTLKQVMEEKLDAKNVQLASVTKEKGFRIYTDEE 234
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D + + +G GD + LY+ R G ++ A A L ++ R P+
Sbjct: 43 IDDYIAMTIAGSVGDAQAIVRALIAEARLYKMRTGKNISPRACATLLSNILHSS-RMFPF 101
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDK-AAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
+ I++ GYD GP L+ +D + +++ + G GS + +++ + MS+EE +
Sbjct: 102 LTQIIIGGYDLTDGPKLFSLDPLGGMNEEKTFTSTGSGSPIAYGVLEAEYDRDMSIEEGL 161
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK 162
L K + R + + ++ K+G + + E K
Sbjct: 162 KLALKALKSAMERDTYSGNGVSVAVITKEGVKLLSDEEITK 202
>gi|218884589|ref|YP_002428971.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390939081|ref|YP_006402819.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
fermentans DSM 16532]
gi|302595704|sp|B8D673.1|PSB1_DESK1 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|218766205|gb|ACL11604.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390192188|gb|AFL67244.1| proteasome endopeptidase complex, beta subunit [Desulfurococcus
fermentans DSM 16532]
Length = 202
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP 61
++ +H + +G GD + ++ Y+ ++G + T + A + + + +P
Sbjct: 43 MITNHIGVGFAGLMGDVNFLVKVLRLEAKNYELQHGREIKTRSLAKLLS-VILYSYKLAP 101
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
+ +++ GYD+E GPSLY +D + ++ + A G G+ +L ++ ++ G+ ++EA
Sbjct: 102 MLTEVVVGGYDEE-GPSLYILDPVGSVIEEKYVAVGSGAQLALGYIEPRYNPGLGLKEAE 160
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+L + + R V++ + ++DK+G
Sbjct: 161 ELAVNAVKTVIERDVLSGDGIDLVVIDKNG 190
>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595707|sp|A1RSJ8.1|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 203
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAAN------FTRGELAT 55
+++ IA++G D ++ NV Y+ T A A F+R
Sbjct: 44 IINDKLAIASAGIIADMQTLARILKLNVMSYELEVRKKPTVRAMAKLLSIIMFSR----- 98
Query: 56 ALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGM 115
R P+ +L+ G D+E GP L +D + +L + + AA G G+ ++S++D + +
Sbjct: 99 --RLLPFYAEVLVGGVDEE-GPHLIVMDPLGSLIEDNYAALGTGAKLAVSLLDATYRPDI 155
Query: 116 SVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
S++EA L + I R V+ + +VD +GARE
Sbjct: 156 SLQEAKKLAVQAIKAAIERDPVSGGGIDLAVVDNNGARE 194
>gi|334323745|ref|XP_001377227.2| PREDICTED: proteasome subunit beta type-8-like [Monodelphis
domestica]
Length = 268
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RNG ++ +AA+ + R
Sbjct: 101 INPYLLGTMSGCAADCQYWERLLAKECRLYRLRNGERISVSAASKLLS-NMMCQYRGMGL 159
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + G G+ ++ +MD + +S EEA D
Sbjct: 160 SMGSMICGWDKK-GPGLYYVDENGTRLSGTMFSTGSGNSYAYGVMDSGYRPDLSPEEAYD 218
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 219 LGRRAIVHATHR 230
>gi|386002905|ref|YP_005921204.1| proteasome subunit beta [Methanosaeta harundinacea 6Ac]
gi|357210961|gb|AET65581.1| Proteasome subunit beta [Methanosaeta harundinacea 6Ac]
Length = 179
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD IQ LY + G P+T + LA+ R P+MV +LL
Sbjct: 22 LTTAGVVGDAQSLVRMIQVESKLYNMQRGEPMTVRGTTSLLSNVLASR-RYFPFMVQLLL 80
Query: 69 AGYDKETGPSLYYIDYI-ATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G DK+ GP L+ +D + ++ + A G GS + +++ + M+VEE + L +
Sbjct: 81 GGVDKK-GPQLFSLDALGGSIQEQKVVATGSGSPTAYGVLEALYDPEMTVEEGMKLGVRA 139
Query: 128 I 128
I
Sbjct: 140 I 140
>gi|225718548|gb|ACO15120.1| Proteasome subunit alpha type-5 [Caligus clemensi]
Length = 243
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 45 AANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSL 104
A F E+ A P+ V +L AG D E GP L+++D T + D A G GS +
Sbjct: 120 AIQFGDSEVRGAALSRPFGVALLFAGVDAEKGPQLFHMDPSGTYIRFDAKAIGSGSEGAQ 179
Query: 105 SMMDRHFHSGMSVEEAV 121
+ +H+ MS++EA+
Sbjct: 180 QSLQEKYHASMSIQEAI 196
>gi|440634035|gb|ELR03954.1| 20S proteasome subunit beta 1 [Geomyces destructans 20631-21]
Length = 229
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + + + +Y +NG P TT AA + EL K +++AG+
Sbjct: 75 SGSAADTQAVADIVHYQLGMYGIQNGAPPTTQVAAAMFQ-ELCYN-NKDRLSAGLIIAGW 132
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ G EAVD V + E
Sbjct: 133 DERHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWQEGFEEAEAVDFVKGALTE 191
>gi|342184267|emb|CCC93748.1| proteasome beta 5 subunit [Trypanosoma congolense IL3000]
Length = 307
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + L++ RN ++ AAA+ + R
Sbjct: 143 INEYLLGTMAGGAADCQYWERVLGMECRLWELRNNSRISVAAASKIL-ANITYQYRNYGL 201
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG+D + GPSLYY+D T K + + G GS ++ ++D + ++VEEA D
Sbjct: 202 SMGTMVAGWD-QFGPSLYYVDGEGTRVKHEIFSVGSGSIYAYGVLDHGYRKDLTVEEACD 260
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 261 LARRSIFHATYR 272
>gi|315518891|dbj|BAJ51778.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 238
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 71 INPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLL-CNMMLGYRGMGL 129
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D+ T + G G+ ++ ++D + M+VEEA +
Sbjct: 130 SMGSMICGWDKE-GPGLYYVDHNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 188
Query: 123 L 123
L
Sbjct: 189 L 189
>gi|336259304|ref|XP_003344454.1| hypothetical protein SMAC_08650 [Sordaria macrospora k-hell]
gi|380087549|emb|CCC05335.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 197
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + LY+ N P TT AA + E+A + K +++AG+
Sbjct: 43 SGSAADTQAVADIVQYQLGLYEMVNARPPTTQTAAAIFQ-EIAYS-NKDRLTAGLIIAGW 100
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D G +Y I +LHK A G GS + D ++ GM EAV V + + E
Sbjct: 101 DARHGGQVYNIPLGGSLHKQSYAIGGSGSTYIYGFCDANWKEGMEEAEAVAFVKEALKE 159
>gi|67588907|ref|XP_665380.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656042|gb|EAL35150.1| hypothetical protein Chro.50424 [Cryptosporidium hominis]
Length = 290
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L +G D + + K LY+ RNG ++ A A+ + R I+
Sbjct: 121 LGTMAGGAADCSYWERVLSKLCRLYELRNGERISVAGASKMIT-NIFFHYRAYDLSAGIM 179
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+AG+DK+ GP LYY+D + K K + G GS ++ ++D + ++ EEA+DL +
Sbjct: 180 IAGFDKD-GPHLYYVDNEGSRVKDCKFSVGSGSLYAYGVLDSGYRYDLTDEEAIDLGKRA 238
Query: 128 IL 129
I+
Sbjct: 239 IV 240
>gi|66356810|ref|XP_625583.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
gi|46226580|gb|EAK87568.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
Length = 290
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L +G D + + K LY+ RNG ++ A A+ + R I+
Sbjct: 121 LGTMAGGAADCSYWERVLSKLCRLYELRNGERISVAGASKMIT-NIFFHYRAYDLSAGIM 179
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+AG+DK+ GP LYY+D + K K + G GS ++ ++D + ++ EEA+DL +
Sbjct: 180 IAGFDKD-GPHLYYVDNEGSRVKDCKFSVGSGSLYAYGVLDSGYRYDLTDEEAIDLGKRA 238
Query: 128 IL 129
I+
Sbjct: 239 IV 240
>gi|786582|gb|AAB33092.1| proteasome subunit MB1 [Homo sapiens]
Length = 215
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G GD + + + +Y+ RN ++ AAA+ LA + +
Sbjct: 48 INPYLLGTMAGGAGDCSFWERLLARQCRIYELRNKERISVAAASKL----LANMVYQYKG 103
Query: 63 M---VNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSV 117
M + ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + V
Sbjct: 104 MGLSMGSMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEV 160
Query: 118 EEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
E+A DL + I + R + + V +DG
Sbjct: 161 EQAYDLARRAIYQATYRDAYSGGAVNLYHVREDG 194
>gi|327289325|ref|XP_003229375.1| PREDICTED: proteasome subunit beta type-5-like [Anolis
carolinensis]
Length = 316
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ LA + +
Sbjct: 145 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKL----LANMVYQYKG 200
Query: 63 M---VNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSV 117
M + ++ G+DK GP LYY+D + +++ F G GS ++ +MDR + +SV
Sbjct: 201 MGLSMGTMICGWDKR-GPGLYYVD--SEGNRISGTVFSVGSGSVYAYGVMDRGYSHNLSV 257
Query: 118 EEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
EEA DL + I + R + + V +DG
Sbjct: 258 EEAYDLARRAIYQATYRDAYSGGTVNLYHVRQDG 291
>gi|169597561|ref|XP_001792204.1| hypothetical protein SNOG_01567 [Phaeosphaeria nodorum SN15]
gi|160707546|gb|EAT91216.2| hypothetical protein SNOG_01567 [Phaeosphaeria nodorum SN15]
Length = 256
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRG-EL 53
+D H A SG D E + + F PL + A F G E
Sbjct: 81 IDRHIGCAMSGLQADARSMVEHARVESQNHAFNYNEPLRVESCTQAICDLALRFGEGAEG 140
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + + FH
Sbjct: 141 EESIMSRPFGVALLIAGYD-EDGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHK 199
Query: 114 GMSVEEAVDLVDKCILEI 131
+++ EA LV K + ++
Sbjct: 200 SLTLPEAEVLVLKTLKQV 217
>gi|308811755|ref|XP_003083185.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3 (ISS)
[Ostreococcus tauri]
gi|116055064|emb|CAL57460.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3 (ISS)
[Ostreococcus tauri]
Length = 294
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 23 EFIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPS 78
+F Q+N+ L++ NG +T AA+ L + + M ++AG+D GP
Sbjct: 116 QFWQRNLGIQCRLHELENGKRITVRAASKLLANTLYSYKGRGLSM-GTMIAGWDL-NGPG 173
Query: 79 LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVA 138
LYY+D T K + + G GS F+ ++D+ + +SV+EA +L + I R +
Sbjct: 174 LYYVDSEGTRLKGQRFSVGSGSLFAYGVLDQGYRWDLSVKEACELGRRAIYHATFRDAFS 233
Query: 139 PPNFVIKIVDKDG 151
+ V K+G
Sbjct: 234 GGTVSVYHVGKNG 246
>gi|390190128|dbj|BAM20998.1| proteasome subunit beta type-8, partial [Polypterus senegalus]
Length = 226
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L SG D V + + ++ +Y+ RN +T +AA+ LA R + +
Sbjct: 64 LGTMSGSAADCVYWERVLAQHCRIYKLRNKEQITVSAASKLLSNMLA-GYRGMGLSIGSM 122
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G+DK+ GP LYY+D T + + G G ++ +MD +++ EA DL +
Sbjct: 123 ICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGHSYAYGVMDSGHRYDLTLPEAYDLAQRA 181
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDG 151
I R + + V +DG
Sbjct: 182 IYHATHRDAYSGGTVNMYHVKQDG 205
>gi|311260174|ref|XP_001924154.2| PREDICTED: proteasome subunit beta type-8 [Sus scrofa]
gi|147225184|emb|CAN13316.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Sus scrofa]
Length = 276
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLS-NMMYQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD +S+EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 227 LGRRAIVHATHR 238
>gi|126311312|ref|XP_001381658.1| PREDICTED: proteasome subunit beta type-1-like [Monodelphis
domestica]
Length = 244
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RK 59
L +I SG GD + T+ I+ + +Y+ N +TT A A L+T L R
Sbjct: 77 LTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAM----LSTILYSRRF 132
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF-------- 111
PY V ++ G D+E ++Y D + + + A G S ++D
Sbjct: 133 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNV 192
Query: 112 -HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
H +S+E A+ LV + R V + I IV KDG +E
Sbjct: 193 EHVPLSLERAMQLVKDVFISAAERDVYTGDSLKICIVTKDGIKE 236
>gi|440906310|gb|ELR56586.1| Proteasome subunit beta type-5, partial [Bos grunniens mutus]
Length = 266
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 99 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 157
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + VEEA
Sbjct: 158 SMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEEA 214
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DL + I + R + + + V +DG
Sbjct: 215 YDLARRAIYQATYRDAYSGGSVSLYHVREDG 245
>gi|20092669|ref|NP_618744.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
gi|74551014|sp|Q8TJB5.1|PSB_METAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19917953|gb|AAM07224.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
Length = 210
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD Q + LY+ R +T A L A R P MV +L+
Sbjct: 52 MTTAGSVGDAQQLVRLVSVESQLYKMRRNESMTIKGIATLMSNFL-NANRYYPMMVQLLI 110
Query: 69 AGYDKETGPSLYYIDYI-ATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G DK GP++Y +D + ++ + +A G GS + +++ + ++V+E +DL +
Sbjct: 111 GGVDK-NGPAIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYKEDIAVKEGLDLAIRA 169
Query: 128 ILEIRSRLVVAPPNFVIKIVDKD 150
I R + N + ++ K+
Sbjct: 170 IHNAMKRDSASGENIDVVVITKE 192
>gi|29726328|pdb|1J2Q|H Chain H, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726329|pdb|1J2Q|I Chain I, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726330|pdb|1J2Q|J Chain J, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726331|pdb|1J2Q|K Chain K, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726332|pdb|1J2Q|L Chain L, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726333|pdb|1J2Q|M Chain M, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726334|pdb|1J2Q|N Chain N, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
Length = 202
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD I+ +LY+ R T A A T L + R PY+V +L+
Sbjct: 43 MTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLT-SNLLNSYRYFPYLVQLLI 101
Query: 69 AGYDKETGPSLYYIDYI-ATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G D E G S+Y ID I + + D A G GS + +++ F + V+EAV+L +
Sbjct: 102 GGIDSE-GKSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRA 160
Query: 128 I 128
I
Sbjct: 161 I 161
>gi|426232754|ref|XP_004010385.1| PREDICTED: proteasome subunit beta type-5 [Ovis aries]
Length = 263
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + VEEA
Sbjct: 155 SMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEEA 211
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DL + I + R + + + V +DG
Sbjct: 212 YDLARRAIYQATYRDAYSGGSVSLYHVREDG 242
>gi|164429302|ref|XP_958142.2| proteasome component PRE3 precursor [Neurospora crassa OR74A]
gi|157073426|gb|EAA28906.2| proteasome component PRE3 precursor [Neurospora crassa OR74A]
gi|336466804|gb|EGO54968.1| proteasome component PRE3 precursor [Neurospora tetrasperma FGSC
2508]
gi|350288605|gb|EGZ69841.1| proteasome component PRE3 precursor [Neurospora tetrasperma FGSC
2509]
Length = 229
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + LY NG P TT AA + E+A A K +++AG+
Sbjct: 75 SGSAADTQAVADIVQYQLGLYHMVNGRPPTTQIAAAVFQ-EIAYA-NKDRLTAGLIIAGW 132
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D G +Y I +LHK + G GS + D ++ GM EAV V + + E
Sbjct: 133 DARHGGQVYNIPLGGSLHKQPYSIGGSGSTYIYGYCDANWKEGMEEAEAVAFVKEALKE 191
>gi|452986785|gb|EME86541.1| hypothetical protein MYCFIDRAFT_65271 [Pseudocercospora fijiensis
CIRAD86]
Length = 245
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQF----RNGIPLTTAA----AANFTRG-EL 53
+D H A SG D E + ++F R G+ T A A F G +
Sbjct: 70 IDRHIGCAMSGLQADARSMIEHARVTSQSHEFHYNERLGVESCTQAICDLALRFGEGADG 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + + FH
Sbjct: 130 EESIMSRPFGVALLIAGYD-ENGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHK 188
Query: 114 GMSVEEAVDLVDKCILEI 131
+++ EA LV K + ++
Sbjct: 189 SLTLPEAEVLVLKTLKQV 206
>gi|158518464|ref|NP_001103512.1| proteasome beta 8 subunit [Xenopus (Silurana) tropicalis]
gi|157423123|gb|AAI53714.1| psmb8 protein [Xenopus (Silurana) tropicalis]
Length = 271
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LYQ RN ++ +AA+ + R +
Sbjct: 103 INPYLLGTMSGSAADCQYWERVLAKECRLYQLRNNSRISVSAASKLM-CNMMLQYRGTGL 161
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DK+ GP LYY+D T D + G G+ ++ +MD + ++ EEA D
Sbjct: 162 SVGSMICGWDKK-GPGLYYVDDNGTRLCGDIFSTGSGNSYAYGVMDSGYRYDLTPEEAYD 220
Query: 123 LVDKCI 128
L + I
Sbjct: 221 LGRRAI 226
>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 203
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAAN------FTRGELATALRKSPY 62
IA++G D + ++ N Y+ T A A F+R R P+
Sbjct: 51 IASAGIIADMQALAKILKLNARSYELEVKKKPTVKAMAKLLSVVMFSR-------RFMPF 103
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+L+ G D+E GP L +D + +L + + AA G G+ ++S++D + M+VEEA
Sbjct: 104 YAEVLVGGVDEE-GPHLIVMDPLGSLIEDNYAALGTGAKLAVSLLDASYRPDMTVEEAKK 162
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
L + + R V+ + +VD GARE
Sbjct: 163 LAVQAVKAAIERDPVSGGGIDLVVVDGGGARE 194
>gi|254571735|ref|XP_002492977.1| Beta 1 subunit of the 20S proteasome, responsible for cleavage
after acidic residues in peptides [Komagataella pastoris
GS115]
gi|238032775|emb|CAY70798.1| Beta 1 subunit of the 20S proteasome, responsible for cleavage
after acidic residues in peptides [Komagataella pastoris
GS115]
gi|328353009|emb|CCA39407.1| 20S proteasome subunit beta 1 [Komagataella pastoris CBS 7435]
Length = 216
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + ++ ++ LY+ ++G P TT AA+ + EL K I+ AGY
Sbjct: 65 SGSAADTQAVADIVKYHLELYEAQHGAPPTTKIAASLFQ-ELCYN-NKDALTAGIICAGY 122
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D + ++Y I ++HK + A G GS F +++F S M+ +E V+ +
Sbjct: 123 DDKEKGAIYSIPIGGSIHKQEYAIAGSGSTFIYGYCNKNFKSNMTRDETVEFI 175
>gi|171680727|ref|XP_001905308.1| hypothetical protein [Podospora anserina S mat+]
gi|170939991|emb|CAP65217.1| unnamed protein product [Podospora anserina S mat+]
Length = 230
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + L+ NG P TT AA + E+ A K +++AG+
Sbjct: 75 SGSAADTQAVADIVQYQLGLFHMMNGKPPTTQTAAAIFQ-EMCYA-NKDRLSAGLIIAGW 132
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM +AV+ V + + E
Sbjct: 133 DERHGGQVYSIPLGGSLHKQPYAIGGSGSTYIYGYCDANWKEGMEEADAVNFVKESLKE 191
>gi|159481070|ref|XP_001698605.1| 20S proteasome beta subunit E, type beta 5 [Chlamydomonas
reinhardtii]
gi|158282345|gb|EDP08098.1| 20S proteasome beta subunit E, type beta 5 [Chlamydomonas
reinhardtii]
Length = 273
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 22 TEFIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
+F Q+N+ LY+ NG +T AA+ + + R + ++AG+D TGP
Sbjct: 111 CQFWQRNLGMQCRLYELNNGKRITVRAASKLLS-NVMFSYRGMGLSMGTMVAGWDP-TGP 168
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
LYY+D K + G GS ++ ++D + M VEEAV+L + I R
Sbjct: 169 GLYYVDSDGQRTKGQIFSVGSGSLYAYGVLDAGYRWDMPVEEAVELGRRSIYHAGFRDCA 228
Query: 138 APPNFVIKIVDKDG 151
+ + V +DG
Sbjct: 229 SGGTVSVYHVTQDG 242
>gi|11498092|ref|NP_069317.1| proteasome subunit beta [Archaeoglobus fulgidus DSM 4304]
gi|17380266|sp|Q9P996.1|PSB_ARCFU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2650155|gb|AAB90757.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
Length = 213
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD I+ +LY+ R T A A T L + R PY+V +L+
Sbjct: 54 MTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLT-SNLLNSYRYFPYLVQLLI 112
Query: 69 AGYDKETGPSLYYIDYI-ATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G D E G S+Y ID I + + D A G GS + +++ F + V+EAV+L +
Sbjct: 113 GGIDSE-GKSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRA 171
Query: 128 I 128
I
Sbjct: 172 I 172
>gi|154273695|ref|XP_001537699.1| proteasome component PUP2 [Ajellomyces capsulatus NAm1]
gi|150415307|gb|EDN10660.1| proteasome component PUP2 [Ajellomyces capsulatus NAm1]
gi|225559131|gb|EEH07414.1| proteasome component PUP2 [Ajellomyces capsulatus G186AR]
gi|240282056|gb|EER45559.1| proteasome component PUP2 [Ajellomyces capsulatus H143]
gi|325088194|gb|EGC41504.1| proteasome component [Ajellomyces capsulatus H88]
Length = 245
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
P+ V +L+AGYD E+GP LY+ + T ++ D A G GS + + + +HS +++ EA
Sbjct: 137 PFGVALLIAGYD-ESGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQTEYHSSLTLAEA 195
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKD-GAREYAWRE 159
LV K + ++ + A N + V KD G R Y E
Sbjct: 196 ETLVLKTLKQVMEEKLDA-KNVQLASVTKDMGFRIYGEEE 234
>gi|452980341|gb|EME80102.1| hypothetical protein MYCFIDRAFT_189770 [Pseudocercospora fijiensis
CIRAD86]
Length = 231
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNG-IPLTTAAAANFTRGELATALRKSPYMVNILLAG 70
SG D + +Q ++ +Y N P T AAA F EL K I++AG
Sbjct: 74 SGSAADTQAVADIVQYHLGMYGITNDEAPTTQTAAAIFQ--ELCYE-NKDALSAGIIIAG 130
Query: 71 YDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
+D G +Y I +LHK A G GS + D H+ GM+ EE + V + E
Sbjct: 131 WDHRHGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDAHWREGMTEEEGIKFVKGALQE 190
>gi|113196863|gb|ABI31729.1| low molecular mass protein 7 [Sus scrofa]
Length = 249
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 82 INPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLS-NMMYQYRGMGL 140
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD +S+EEA D
Sbjct: 141 SMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYD 199
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 200 LGRRAIVHATHR 211
>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
gi|121685330|sp|Q0W2D6.1|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
Length = 208
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G GD + +Q L++ R ++ A + LA +R +PY V +L+ G
Sbjct: 55 AGSVGDGQRLARILQVEAKLFELRRHGSMSINALSMLLSNILAE-MRYAPYYVQVLIGGL 113
Query: 72 DKETGPSLYYIDYIATLHKVDK-AAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
DK GP +Y +D + + +K + G GS + +++ + GMSVEE V+L + +
Sbjct: 114 DK-AGPKIYSLDPLGGRIEEEKFVSTGSGSPIAYGVLEDRYKPGMSVEEGVELAARAL 170
>gi|238496413|ref|XP_002379442.1| proteasome component Pup2, putative [Aspergillus flavus NRRL3357]
gi|317147200|ref|XP_001821944.2| proteasome subunit alpha type-5 [Aspergillus oryzae RIB40]
gi|220694322|gb|EED50666.1| proteasome component Pup2, putative [Aspergillus flavus NRRL3357]
gi|391868879|gb|EIT78088.1| 20S proteasome, regulatory subunit alpha type PSMA5/PUP2
[Aspergillus oryzae 3.042]
Length = 246
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 10/166 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAAAANFT-----RGEL 53
+D H A SG D E + + F PL T A + G+
Sbjct: 70 IDQHIGCAMSGLQADARNLVEHARVECQNHAFHYAEPLRVESCTQAICDLALRFGETGDD 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AG+D E GP LY+ + T ++ D A G GS + + + +H
Sbjct: 130 EESVMSRPFGVALLIAGFD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHR 188
Query: 114 GMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+++EEA LV K + ++ + A + + + G R Y E
Sbjct: 189 SLTLEEAETLVLKTLKQVMEEKLDAKNVQLASVTKEKGFRIYNDEE 234
>gi|449300123|gb|EMC96135.1| hypothetical protein BAUCODRAFT_70766 [Baudoinia compniacensis UAMH
10762]
Length = 248
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 51 GELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRH 110
G+ ++ P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + +
Sbjct: 129 GDEEESIMSRPFGVALLIAGYD-EDGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQSS 187
Query: 111 FHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+H +++ EA +LV K + ++ + A + + + G R Y+ E
Sbjct: 188 YHKSLTLPEAEELVLKTLKQVMEEKLDAKNVQLASVTKEKGFRIYSDEE 236
>gi|639871|dbj|BAA08204.1| proteasome subunit RCX [Rattus rattus]
Length = 208
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 41 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 99
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ AF G GS ++ +MDR + + VEEA
Sbjct: 100 SMGTMICGWDKR-GPGLYYVD--SEGNRISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEA 156
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DL + I + R + + V +DG
Sbjct: 157 YDLARRAIYQATYRDAYSGGAVNLYHVREDG 187
>gi|395535314|ref|XP_003769673.1| PREDICTED: proteasome subunit beta type-1 [Sarcophilus harrisii]
Length = 244
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RK 59
L +I SG GD + T+ I+ + +Y+ N +TT A A L+T L R
Sbjct: 77 LTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAM----LSTILYSRRF 132
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF-------- 111
PY V ++ G D+E ++Y D + + + A G S ++D
Sbjct: 133 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNV 192
Query: 112 -HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
H +S+E A+ LV + R V + I IV KDG +E
Sbjct: 193 EHIPLSLERAMQLVKDVFISAAERDVYTGDSLKICIVTKDGIKE 236
>gi|449455403|ref|XP_004145442.1| PREDICTED: proteasome subunit alpha type-5-like [Cucumis sativus]
Length = 237
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDEHIGCAMSGLIADAHTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V +L+AG+D E GPSL+Y D T + + A G GS + S + ++
Sbjct: 128 EESMSR--PFGVALLIAGHD-EKGPSLFYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
++++EA + + IL+ V P N I V
Sbjct: 185 KDLTLQEA-ETIALSILKQVMEEKVTPSNVDIAKV 218
>gi|83769807|dbj|BAE59942.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 266
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 10/166 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAAAANFT-----RGEL 53
+D H A SG D E + + F PL T A + G+
Sbjct: 90 IDQHIGCAMSGLQADARNLVEHARVECQNHAFHYAEPLRVESCTQAICDLALRFGETGDD 149
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AG+D E GP LY+ + T ++ D A G GS + + + +H
Sbjct: 150 EESVMSRPFGVALLIAGFD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHR 208
Query: 114 GMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+++EEA LV K + ++ + A + + + G R Y E
Sbjct: 209 SLTLEEAETLVLKTLKQVMEEKLDAKNVQLASVTKEKGFRIYNDEE 254
>gi|297290551|ref|XP_001115562.2| PREDICTED: proteasome subunit beta type-8-like [Macaca mulatta]
Length = 276
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 227 LGRRAIAHATHR 238
>gi|402866606|ref|XP_003897470.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Papio anubis]
Length = 276
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVS 167
L + I R ++ IV+ +E W + V+ T VS
Sbjct: 227 LGRRAIAHATHR-----DSYSGGIVNMYHMKEDGWVK-VESTDVS 265
>gi|146332395|gb|ABQ22703.1| proteasome subunit beta type 5 precursor-like protein [Callithrix
jacchus]
Length = 164
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYM---VNILL 68
+G D + + + +Y+ RN ++ AAA+ LA + + M + ++
Sbjct: 6 AGGAADCSFWERLLARQCRIYELRNKERISVAAASKL----LANMVYQYKGMGLSMGTMI 61
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
G+DK GP LYY+D + +++ A F G GS ++ +MDR + + VEEA DL +
Sbjct: 62 CGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEEAYDLARR 118
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
I + R + + V +DG
Sbjct: 119 AIYQATYRDAYSGGAVNLYHVREDG 143
>gi|146332701|gb|ABQ22856.1| proteasome subunit beta type 5 precursor-like protein [Callithrix
jacchus]
Length = 168
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ LA + +
Sbjct: 1 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKL----LANMVYQYKG 56
Query: 63 M---VNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSV 117
M + ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + V
Sbjct: 57 MGLSMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEV 113
Query: 118 EEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
EEA DL + I + R + + V +DG
Sbjct: 114 EEAYDLARRAIYQATYRDAYSGGAVNLYHVREDG 147
>gi|121715648|ref|XP_001275433.1| proteasome component Pup2, putative [Aspergillus clavatus NRRL 1]
gi|119403590|gb|EAW14007.1| proteasome component Pup2, putative [Aspergillus clavatus NRRL 1]
Length = 250
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 10/162 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAAAANFT-----RGEL 53
+D H A SG D E + + F PL TT A + G+
Sbjct: 74 IDQHIGCAMSGLQADARSLVEHARVECQNHAFHYAEPLRVESTTQAICDLALRFGETGDD 133
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GP LY+ + T ++ D A G GS + + + +H
Sbjct: 134 DESVMSRPFGVALLIAGYD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHR 192
Query: 114 GMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREY 155
+++ EA LV K + ++ + A + + + G R Y
Sbjct: 193 SLTLAEAETLVLKTLKQVMEEKLDAKNVQLASVTKEKGFRIY 234
>gi|159474370|ref|XP_001695298.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
gi|158275781|gb|EDP01556.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
Length = 212
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D ++Q ++ +Q G + AAN + + K +++AGY
Sbjct: 48 SGSAADTQAIAGYVQHFIAQHQAEEGEHINVKTAANLVK--MMAYNNKDNLQAGLIVAGY 105
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
DK G ++ I T+ + A G GS + +D+++ GMS +EA+D V K +
Sbjct: 106 DKHGGGQVFSISLGGTITETSFAMSGSGSTYINGFVDKYWREGMSEQEAMDFVTKAL 162
>gi|355766753|gb|EHH62548.1| hypothetical protein EGM_20930 [Macaca fascicularis]
Length = 276
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 227 LGRRAIAHATHR 238
>gi|48477758|ref|YP_023464.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
gi|74567841|sp|Q6L181.1|PSB_PICTO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|48430406|gb|AAT43271.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
Length = 210
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS-- 60
+D++ + +G GD +++ + LY+ + + + AAA L+ L ++
Sbjct: 44 IDNYAAMTIAGLVGDAQVLVRYMKAEMELYRVQRKVSMPIDAAATL----LSNMLNQTKF 99
Query: 61 -PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
PYMV +L+ GYD T P ++ ID + A+ G GS F +++ + MS+++
Sbjct: 100 YPYMVQLLVGGYD--TKPHIFSIDAAGGSVEDIYASTGSGSPFVYGVLEAEYQKNMSLDD 157
Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVD 148
++LV K I + R + + +VD
Sbjct: 158 GINLVIKAISAAKQRDSASGNMLQLGVVD 186
>gi|332823719|ref|XP_003311252.1| PREDICTED: proteasome subunit beta type-8 [Pan troglodytes]
Length = 160
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + + K LY RNG ++ +AA+ + R + ++ G+
Sbjct: 2 SGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGLSMGSMICGW 60
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA DL + I
Sbjct: 61 DKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAI 116
>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
gi|452209277|ref|YP_007489391.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
gi|74550648|sp|Q8PZ04.1|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
gi|452099179|gb|AGF96119.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
Length = 210
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD Q + LY+ R +T A L A R P MV +L+
Sbjct: 52 MTTAGSVGDAQQLVRLVSVESQLYKMRRNESMTIKGIATLMSNFL-NANRYYPMMVQLLI 110
Query: 69 AGYDKETGPSLYYIDYI-ATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G DK GP++Y +D + ++ + +A G GS + +++ + ++V+E +DL +
Sbjct: 111 GGVDK-NGPAIYSLDPMGGSIEETRISATGSGSPMAYGVLEDQYREDIAVKEGLDLAIRA 169
Query: 128 ILEIRSRLVVAPPNFVIKIVDKD 150
I R + N + ++ K+
Sbjct: 170 IHNATKRDSASGENIDVVVITKE 192
>gi|383420117|gb|AFH33272.1| proteasome subunit beta type-8 isoform E2 proprotein [Macaca
mulatta]
Length = 276
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 227 LGRRAIAHATHR 238
>gi|348504568|ref|XP_003439833.1| PREDICTED: proteasome subunit beta type-11-like [Oreochromis
niloticus]
Length = 268
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
+ + SH + SG D + + + + LYQ R+G L+T+ AA + + +
Sbjct: 80 LPIHSHLVGLTSGTSADCALWKRILARELRLYQLRHGRRLSTSGAAKLL-SHMLHPFKGT 138
Query: 61 PYMVNILLAGYD-----KETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGM 115
V L G+D +GPSL+Y+ T + + G GS ++ S++D+ H G+
Sbjct: 139 ELCVAATLCGWDGGEKMNLSGPSLFYVCSDGTRLRGMLFSVGSGSPYAYSILDQGVHWGL 198
Query: 116 SVEEAVDLVDKCI 128
+V+EA + + +
Sbjct: 199 TVDEAKSIAREAV 211
>gi|322709180|gb|EFZ00756.1| proteasome component PRE3 precursor [Metarhizium anisopliae ARSEF
23]
Length = 197
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + L+ +G P T AA+ + E+ A K +++AG+
Sbjct: 43 SGSAADTQAVADIVQYQLGLFAMHSGKPPMTQTAASIFQ-EICYA-NKDRLSAGLIIAGW 100
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM EEAV+ V + E
Sbjct: 101 DERFGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWKEGMEKEEAVNFVKGALRE 159
>gi|596142|gb|AAA56778.1| proteasome subunit LMP7 [Homo sapiens]
Length = 276
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLL-SNMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCI 128
L + I
Sbjct: 227 LGRRAI 232
>gi|147225186|emb|CAN13318.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Sus scrofa]
Length = 208
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + + K LY RNG ++ +AA+ + R + ++ G+
Sbjct: 50 SGSAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLS-NMMYQYRGMGLSMGSMICGW 108
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
DK+ GP LYY+D T + + G G+ ++ +MD +S+EEA DL + I+
Sbjct: 109 DKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHA 167
Query: 132 RSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVS 167
R ++ +V+ +E W + V+ T VS
Sbjct: 168 THR-----DSYSGGVVNMYHMKEDGWVK-VESTDVS 197
>gi|344300935|gb|EGW31247.1| hypothetical protein SPAPADRAFT_61824 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFR---NGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
SG D + ++ + +Y + N P T AA F + K I+
Sbjct: 65 SGSAADTQAVADMVKYYLQIYAAQLPPNETPTTEIAANVF---QEICYNNKDNLTAGIIC 121
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
AGYDK+ G S+Y I ++HK D A G GS F + +F GM +E VD + +
Sbjct: 122 AGYDKKNGGSVYSIPIGGSIHKQDYAIAGSGSTFIYGWCNENFKQGMQKDECVDFIKTAL 181
Query: 129 LE 130
E
Sbjct: 182 SE 183
>gi|291395993|ref|XP_002714656.1| PREDICTED: proteasome beta 8 subunit [Oryctolagus cuniculus]
Length = 276
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMFQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDENGTRLSGTMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 227 LGRRAIVHATHR 238
>gi|116778764|gb|ABK20984.1| unknown [Picea sitchensis]
Length = 237
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P++T + A F G+
Sbjct: 68 MEIDEHVGCAMSGLIADARTLVEHARVETQNHRFSYGEPMSTESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GP LYY D T + D + G G + + +
Sbjct: 128 EDSMSR--PFGVSLLIAGHD-ENGPCLYYTDPSGTFWQCDAKSIGSGVEAADIALKEQYR 184
Query: 113 SGMSVEEAVDL 123
M++EEA L
Sbjct: 185 KDMTLEEAETL 195
>gi|355561577|gb|EHH18209.1| hypothetical protein EGK_14764 [Macaca mulatta]
Length = 276
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 227 LGRRAIAHATHR 238
>gi|441594222|ref|XP_004087149.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Nomascus
leucogenys]
Length = 160
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + + K LY RNG ++ +AA+ + R + ++ G+
Sbjct: 2 SGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGLSIGSMICGW 60
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA DL + I
Sbjct: 61 DKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAI 116
>gi|440635608|gb|ELR05527.1| 20S proteasome subunit alpha 5 [Geomyces destructans 20631-21]
Length = 238
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRG-EL 53
+D H A SG D E + + F PL + A F G +
Sbjct: 63 IDRHIGCAMSGLQADARSMVEHARVESQNHAFNYNEPLRVESCTQAICDLALRFGEGADG 122
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AG+D E GP LY+ + T ++ D A G GS + + + FH
Sbjct: 123 EESIMSRPFGVALLIAGFD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHK 181
Query: 114 GMSVEEAVDLVDKCILEI 131
+++EEA LV K + ++
Sbjct: 182 SLTIEEAETLVLKTLKQV 199
>gi|426352663|ref|XP_004043829.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Gorilla
gorilla gorilla]
Length = 276
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCI 128
L + I
Sbjct: 227 LGRRAI 232
>gi|346977948|gb|EGY21400.1| proteasome component PRE3 [Verticillium dahliae VdLs.17]
Length = 229
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + +Y RNG P T AA+ + E+ + K +++AG+
Sbjct: 75 SGSAADTQAVADIVQYQLGMYAMRNGKPPMTQTAASIFQ-EICYS-NKDRLSAGLIIAGW 132
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ M +EAV V + E
Sbjct: 133 DERHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWQESMEEQEAVAFVKGALRE 191
>gi|52547780|gb|AAU81925.1| low molecular mass protein 7, partial [Marmota monax]
Length = 156
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 26 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 84
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D+ T + G G+ ++ +MD + +S EEA D
Sbjct: 85 SMGSMICGWDKK-GPGLYYVDHNGTRLSGCMFSTGSGNSYAYGVMDSGYLPNLSPEEAYD 143
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 144 LGRRAIVHATHR 155
>gi|300122116|emb|CBK22690.2| unnamed protein product [Blastocystis hominis]
Length = 273
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 31 LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHK 90
LY+ RNG ++ AAA+ + + V ++ G+DK TGP ++Y+D T K
Sbjct: 131 LYELRNGERISVAAASKILS-DFLYHYKDYGLSVGTMICGWDK-TGPQIFYVDNDGTRLK 188
Query: 91 VDKA----AFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKI 146
D+ + G GS ++ +++D+ +H M+ +EA+DL + I R ++ + +
Sbjct: 189 ADEKRSYFSVGSGSSYAYAVLDQLYHYDMTDDEAIDLGRRAIYHATHRDAMSGGINNVYL 248
Query: 147 VDKDGAR 153
+ +G R
Sbjct: 249 IKPEGWR 255
>gi|342873605|gb|EGU75769.1| hypothetical protein FOXB_13788 [Fusarium oxysporum Fo5176]
Length = 234
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + L+ NG P T AA+ + E+ A K +++AG+
Sbjct: 80 SGSAADTQAVADIVQYQLGLFAMTNGKPPMTQTAASIFQ-EICYA-NKDRLSAGLIIAGW 137
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM ++AV+ V + E
Sbjct: 138 DERFGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMEKDDAVNFVKGALRE 196
>gi|219567026|dbj|BAH05031.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 238
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 71 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNQRISVAAASKLL-CNMMLGYRGMGL 129
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 130 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYE 188
Query: 123 L 123
L
Sbjct: 189 L 189
>gi|225192937|dbj|BAH29707.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 106 INPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 164
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
V ++ G+DKE GP +YY+D A +++ F G GS ++ ++D + M+VEEA
Sbjct: 165 SVGSMICGWDKE-GPGIYYVD--ANGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEA 221
Query: 121 VDLVDKCILEIRSR 134
+L + I+ R
Sbjct: 222 YELGRRGIVHATHR 235
>gi|351697092|gb|EHB00011.1| Proteasome subunit beta type-5 [Heterocephalus glaber]
Length = 263
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ AF G GS ++ +MDR + + VEEA
Sbjct: 155 SMGTMICGWDKR-GPGLYYVD--SEGNRISGVAFSVGSGSVYAYGVMDRGYSYDLEVEEA 211
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DL + I + R + + + V +DG
Sbjct: 212 YDLARRAIYQATYRDAYSGGSVNLYHVREDG 242
>gi|596140|gb|AAA56777.1| proteasome subunit LMP7 [Homo sapiens]
Length = 276
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCI 128
L + I
Sbjct: 227 LGRRAI 232
>gi|2055313|dbj|BAA19767.1| LMP7 [Oryzias latipes]
Length = 225
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L SG D + + K LY+ RN ++ AAA+ + R V +
Sbjct: 63 LGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLC-NMMLGYRGMGLSVGSM 121
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G+DKE GP +YY+D + G GS ++ ++D + M+VEEA +L +
Sbjct: 122 ICGWDKE-GPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRG 180
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
I+ R ++ +V+ +E W + KD
Sbjct: 181 IVHATHR-----DSYSGGVVNMYHIQEDGWIKVCKD 211
>gi|4758970|ref|NP_004150.1| proteasome subunit beta type-8 isoform E1 proprotein [Homo sapiens]
gi|34637|emb|CAA47026.1| LMP7 [Homo sapiens]
gi|36057|emb|CAA44482.1| RING10 [Homo sapiens]
gi|38481|emb|CAA78705.1| proteasome subunit LMP7 [Homo sapiens]
gi|1054746|emb|CAA60786.1| LMP7 [Homo sapiens]
gi|12654559|gb|AAH01114.1| Proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Homo sapiens]
gi|119624049|gb|EAX03644.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7), isoform CRA_a [Homo
sapiens]
gi|228159|prf||1717394A RING10 gene
Length = 272
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 105 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 164 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 222
Query: 123 LVDKCI 128
L + I
Sbjct: 223 LGRRAI 228
>gi|219567062|dbj|BAH05049.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 238
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 71 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 129
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 130 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 188
Query: 123 L 123
L
Sbjct: 189 L 189
>gi|219567028|dbj|BAH05032.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 238
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 71 INPYLLGTMSGSAADCQHWERLLAKECRLYKLRNNQRISVAAASKLL-CNMMLGYRGMGL 129
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 130 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 188
Query: 123 L 123
L
Sbjct: 189 L 189
>gi|219567022|dbj|BAH05029.1| proteasome subunit, beta type 8, partial [Oryzias sarasinorum]
Length = 275
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLS-NMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SIGSMICGWDKE-GPGLYYVDENGTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTVEEAYE 225
Query: 123 L 123
L
Sbjct: 226 L 226
>gi|160333293|ref|NP_001099197.2| proteasome subunit beta type-5 [Rattus norvegicus]
gi|149063910|gb|EDM14180.1| proteasome (prosome, macropain) subunit, beta type 5, isoform CRA_a
[Rattus norvegicus]
Length = 263
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ AF G GS ++ +MDR + + VEEA
Sbjct: 155 SMGTMICGWDKR-GPGLYYVD--SEGNRISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEA 211
Query: 121 VDLVDKCILEIRSR 134
DL + I + R
Sbjct: 212 YDLARRAIYQATYR 225
>gi|403268781|ref|XP_003926445.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 252
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 10 AASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLA 69
A++G D + + K LY RNG ++ +AA+ + R + ++
Sbjct: 92 ASAGSYIDCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGLSMGSMIC 150
Query: 70 GYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCIL 129
G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA DL + I+
Sbjct: 151 GWDKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIV 209
Query: 130 EIRSR 134
R
Sbjct: 210 HATHR 214
>gi|255938979|ref|XP_002560259.1| Pc15g00320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584881|emb|CAP82918.1| Pc15g00320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 246
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAAAANFT-----RGEL 53
+D H A SG D E + + F PL TT A + G+
Sbjct: 70 IDQHIGCAMSGLQADARNLVEHARVECQNHAFHYAEPLRVESTTQAICDLALRFGESGDD 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GP LY+ + T ++ D A G GS + + + +H
Sbjct: 130 EESVMSRPFGVALLIAGYD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHR 188
Query: 114 GMSVEEAVDLVDKCILEI 131
+++ EA LV K + ++
Sbjct: 189 SLTLAEAETLVLKTLKQV 206
>gi|225192978|dbj|BAH29683.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193050|dbj|BAH29663.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 105 INPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLL-CNMMLGYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D+ T + G G+ ++ ++D + M+VEEA +
Sbjct: 164 SMGSMICGWDKE-GPGLYYVDHNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 222
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 223 LGCRGIAHATHR 234
>gi|73747875|ref|NP_683720.2| proteasome subunit beta type-8 isoform E2 proprotein [Homo sapiens]
gi|334302881|sp|P28062.3|PSB8_HUMAN RecName: Full=Proteasome subunit beta type-8; AltName: Full=Low
molecular mass protein 7; AltName: Full=Macropain
subunit C13; AltName: Full=Multicatalytic endopeptidase
complex subunit C13; AltName: Full=Proteasome component
C13; AltName: Full=Proteasome subunit beta-5i; AltName:
Full=Really interesting new gene 10 protein; Flags:
Precursor
gi|38482|emb|CAA78706.1| proteasome subunit LMP7 [Homo sapiens]
gi|1054747|emb|CAA60787.1| LMP7 [Homo sapiens]
gi|119624050|gb|EAX03645.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7), isoform CRA_b [Homo
sapiens]
gi|208967166|dbj|BAG73597.1| proteasome (prosome, macropain) subunit beta type 8 [synthetic
construct]
Length = 276
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCI 128
L + I
Sbjct: 227 LGRRAI 232
>gi|146414760|ref|XP_001483350.1| proteasome component PUP2 [Meyerozyma guilliermondii ATCC 6260]
gi|146391823|gb|EDK39981.1| proteasome component PUP2 [Meyerozyma guilliermondii ATCC 6260]
Length = 251
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 57 LRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMS 116
L P+ V +L+AG+DK+ GP LY+ + T ++ D A G GS + + + +H M+
Sbjct: 133 LMSRPFGVALLIAGFDKDKGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSMT 192
Query: 117 VEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRES 160
++EA L K + ++ + + + + G R Y E+
Sbjct: 193 LKEAEVLALKILKQVMEEKLDCKNAQLASVTAEGGFRVYTDEET 236
>gi|225193065|dbj|BAH29673.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 105 INPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLL-CNMMLGYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D+ T + G G+ ++ ++D + M+VEEA +
Sbjct: 164 SMGSMICGWDKE-GPGLYYVDHNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 222
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 223 LGCRGIAHATHR 234
>gi|320582525|gb|EFW96742.1| Beta 6 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 226
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 18/163 (11%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L+ A+G D Q + + + Y F + P++T +AA F + L R PY V+ +
Sbjct: 56 LLTANGFAADSAQLIKVFKNQLEWYHFDHNKPMSTQSAARFIQ-HLLYGKRFFPYYVHTI 114
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDR--HFHSGM---------- 115
L G D+E ++Y D + + + A G + + +D +F + M
Sbjct: 115 LGGLDEEGKGAIYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQMDPASDGKKRK 174
Query: 116 -----SVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
S+EE + LV R + I IV KDG R
Sbjct: 175 PIRFLSLEEVIQLVRDAFSSATERHIQVGDGLEILIVTKDGVR 217
>gi|219567040|dbj|BAH05038.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 238
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L SG D + + K LY+ RN ++ AAA+ + R V +
Sbjct: 76 LGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLC-NMMLGYRGMGLSVGSM 134
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G+DKE GP +YY+D + G GS ++ ++D + M+VEEA +L +
Sbjct: 135 ICGWDKE-GPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRG 193
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
I+ R ++ +V+ +E W + KD
Sbjct: 194 IVHATHR-----DSYSGGVVNMYHIQEDGWIKVCKD 224
>gi|307110687|gb|EFN58923.1| hypothetical protein CHLNCDRAFT_56983 [Chlorella variabilis]
Length = 275
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ H L +G D + + + LY+ NG +T A+ + + R
Sbjct: 96 INPHLLGTMAGGAADCQFWERNLGRQCRLYELANGKRITVRGASKLLANTMFS-YRGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG+D E GP LYY+D K + G GS ++ ++D + +SVEEAV+
Sbjct: 155 SMGTMVAGWD-EAGPGLYYVDSDGQRTKGKLFSVGSGSLYAYGVLDEGYRWDLSVEEAVE 213
Query: 123 LVDKCI 128
L + I
Sbjct: 214 LGQRSI 219
>gi|187608893|sp|P28075.3|PSB5_RAT RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain epsilon chain; AltName:
Full=Multicatalytic endopeptidase complex epsilon chain;
AltName: Full=Proteasome chain 6; AltName:
Full=Proteasome epsilon chain; AltName: Full=Proteasome
subunit X; Flags: Precursor
Length = 263
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ AF G GS ++ +MDR + + VEEA
Sbjct: 155 SMGTMICGWDKR-GPGLYYVD--SEGNRISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEA 211
Query: 121 VDLVDKCILEIRSR 134
DL + I + R
Sbjct: 212 YDLARRAIYQATYR 225
>gi|145353826|ref|XP_001421201.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581438|gb|ABO99494.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 297
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 22 TEFIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
+F Q+N+ L++ NG +T AA+ L + K M ++AG+D GP
Sbjct: 116 CQFWQRNLGIQCRLHELENGKRITVRAASKLLANTLYSYKGKGLSM-GTMVAGWDL-NGP 173
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
LYY+D T K + + G GS F+ ++D+ + ++VEEA +L + I
Sbjct: 174 GLYYVDSEGTRLKGQRFSVGSGSLFAYGVLDQGYKWDLTVEEACELGRRAI 224
>gi|448100175|ref|XP_004199291.1| Piso0_002723 [Millerozyma farinosa CBS 7064]
gi|359380713|emb|CCE82954.1| Piso0_002723 [Millerozyma farinosa CBS 7064]
Length = 256
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 57 LRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMS 116
L P+ V +L+AG+DK+ GP LYY + T ++ D A G GS + + + +H ++
Sbjct: 133 LMSRPFGVALLIAGFDKDKGPQLYYAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLT 192
Query: 117 VEEAVDLVDKCILEI 131
++EA L K + ++
Sbjct: 193 LKEAEVLCVKILRQV 207
>gi|194884165|ref|XP_001976166.1| GG20151 [Drosophila erecta]
gi|190659353|gb|EDV56566.1| GG20151 [Drosophila erecta]
Length = 282
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D V + + K L++ RN ++ AAA+ +A + + ++LAGY
Sbjct: 119 AGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIM-ANIAHEYKGMGLSMGMMLAGY 177
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
DK GP LYY+D + + + G GS ++ ++D +H + EEA +L + I
Sbjct: 178 DKR-GPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDEEAQELGRRAI 233
>gi|46122507|ref|XP_385807.1| hypothetical protein FG05631.1 [Gibberella zeae PH-1]
Length = 212
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + L+ NG P T AA+ + E+ A K +++AG+
Sbjct: 58 SGSAADTQAVADIVQYQLGLFAMTNGKPPMTQTAASIFQ-EICYA-NKDRLSAGLIIAGW 115
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM ++AV+ V + E
Sbjct: 116 DERFGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMEKDDAVNFVKGALRE 174
>gi|61357317|gb|AAX41370.1| proteasome subunit beta type 8 [synthetic construct]
Length = 272
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 105 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 164 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 222
Query: 123 LVDKCI 128
L + I
Sbjct: 223 LGRRAI 228
>gi|219567066|dbj|BAH05051.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 238
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 71 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNSQRISVAAASKLL-CNMMLGYRGMGL 129
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 130 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYE 188
Query: 123 L 123
L
Sbjct: 189 L 189
>gi|195582278|ref|XP_002080955.1| GD10758 [Drosophila simulans]
gi|194192964|gb|EDX06540.1| GD10758 [Drosophila simulans]
Length = 282
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D V + + K L++ RN ++ AAA+ +A + + ++LAGY
Sbjct: 119 AGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIM-ANIAHEYKGMGLSMGMMLAGY 177
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
DK GP LYY+D + + + G GS ++ ++D +H + EEA +L + I
Sbjct: 178 DKR-GPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDEEAQELGRRAI 233
>gi|195333237|ref|XP_002033298.1| GM21240 [Drosophila sechellia]
gi|194125268|gb|EDW47311.1| GM21240 [Drosophila sechellia]
Length = 282
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D V + + K L++ RN ++ AAA+ +A + + ++LAGY
Sbjct: 119 AGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIM-ANIAHEYKGMGLSMGMMLAGY 177
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
DK GP LYY+D + + + G GS ++ ++D +H + EEA +L + I
Sbjct: 178 DKR-GPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDEEAQELGRRAI 233
>gi|378792313|pdb|3UNB|K Chain K, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792327|pdb|3UNB|Y Chain Y, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792341|pdb|3UNB|MM Chain m, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792355|pdb|3UNB|1 Chain 1, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792369|pdb|3UNE|K Chain K, Mouse Constitutive 20s Proteasome
gi|378792383|pdb|3UNE|Y Chain Y, Mouse Constitutive 20s Proteasome
gi|378792397|pdb|3UNE|MM Chain m, Mouse Constitutive 20s Proteasome
gi|378792411|pdb|3UNE|1 Chain 1, Mouse Constitutive 20s Proteasome
Length = 205
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 37 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 95
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ AF G GS ++ +MDR + + VEEA
Sbjct: 96 SMGTMICGWDKR-GPGLYYVD--SEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEA 152
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DL + I + R + + V +DG
Sbjct: 153 YDLARRAIYQATYRDAYSGGAVNLYHVREDG 183
>gi|322694306|gb|EFY86139.1| proteasome component PRE3 precursor [Metarhizium acridum CQMa 102]
Length = 224
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + L+ +G P T AA+ + E+ A K +++AG+
Sbjct: 70 SGSAADTQAVADIVQYQLGLFAMHSGKPPMTQTAASIFQ-EICYA-NKDRLSAGLIIAGW 127
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM EEAV+ V + E
Sbjct: 128 DERFGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWKEGMEKEEAVNFVKGALRE 186
>gi|449278062|gb|EMC86029.1| Proteasome subunit beta type-1 [Columba livia]
Length = 237
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RK 59
L +I SG GD + T+ I+ + +Y+ N +TT A A L+T L R
Sbjct: 70 LTERTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAM----LSTILYSRRF 125
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF-------- 111
PY V ++ G D+E ++Y D + + + A G S ++D
Sbjct: 126 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAAGSASAMLQPLLDNQIGFKNMQNV 185
Query: 112 -HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
H +++E+A+ LV + R V I IV KDG +E
Sbjct: 186 EHLPLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIKE 229
>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
gi|302595818|sp|D2RGT4.1|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
Length = 215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD I + LY+ R T A A + ++R PY V +L+
Sbjct: 55 MTTAGAVGDAQFLARLISVEIKLYEIRKEEKPTVKAIATLL-SNILNSVRWFPYFVQLLV 113
Query: 69 AGYDKETGPSLYYIDYI-ATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G DK GPS+Y ID + + ++D A G GS + +++ + ++V++ V+L +
Sbjct: 114 GGVDKR-GPSIYSIDLLGGAIEEIDIVATGSGSPTAYGVLEDRYTPEITVDDGVELAVRA 172
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
I R + + + KDG E + E
Sbjct: 173 IYSAMRRDSASGDGIDVVKITKDGYFELSKEE 204
>gi|116780859|gb|ABK21850.1| unknown [Picea sitchensis]
Length = 233
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ SG D +++++ + + + G P T AN R L + K+ +++
Sbjct: 56 LCRSGSAADSQVVSDYVRYFLHQHIIQLGQPATVKVTANLIR--LLSYNNKNTLETGLIV 113
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
G+DK G S+Y + T+ ++ A G GS + +D+ + GMS EEA LV KC+
Sbjct: 114 GGWDKYEGGSIYSVPLGGTMLQLPFAIGGSGSSYLYGFLDQAWKDGMSKEEAEALVVKCV 173
>gi|126458649|ref|YP_001054927.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595741|sp|A3MS44.1|PSB1_PYRCJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126248370|gb|ABO07461.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum calidifontis
JCM 11548]
Length = 201
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H SG D F+ Y+ + P+ A N+ L + R Y
Sbjct: 38 IDDHVAATMSGGVADLQSVLSFLSLRAREYRVEHKRPIPIRALVNYVSLLLFYS-RPYIY 96
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+V+ ++ G D E GP LY +D++ T+ K A G GS ++ ++ + ++++EAV+
Sbjct: 97 LVHSIVGGVDAEEGPVLYMVDWLGTVTKEKYIATGSGSPYAKGALEVAYREDLTIDEAVE 156
Query: 123 LVDKCI 128
L + +
Sbjct: 157 LAIRAV 162
>gi|62122596|dbj|BAD93264.1| PSMB8-A [Oryzias latipes]
Length = 273
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 7/161 (4%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 106 INPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 164
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP +YY+D + G GS ++ ++D + M+VEEA +
Sbjct: 165 SVGSMICGWDKE-GPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYE 223
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
L + I+ R ++ +V+ +E W + KD
Sbjct: 224 LGRRGIVHATHR-----DSYSGGVVNMYHIQEDGWIKVCKD 259
>gi|60826857|gb|AAX36774.1| proteasome subunit beta type 8 [synthetic construct]
Length = 273
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 105 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 164 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 222
Query: 123 LVDKCI 128
L + I
Sbjct: 223 LGRRAI 228
>gi|49456283|emb|CAG46462.1| PSMB8 [Homo sapiens]
Length = 272
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 105 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA D
Sbjct: 164 SMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 222
Query: 123 LVDKCI 128
L + I
Sbjct: 223 LGRRAI 228
>gi|408394398|gb|EKJ73606.1| hypothetical protein FPSE_06224 [Fusarium pseudograminearum CS3096]
Length = 229
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + L+ NG P T AA+ + E+ A K +++AG+
Sbjct: 75 SGSAADTQAVADIVQYQLGLFAMTNGKPPMTQTAASIFQ-EICYA-NKDRLSAGLIIAGW 132
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM ++AV+ V + E
Sbjct: 133 DERFGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMEKDDAVNFVKGALRE 191
>gi|225712004|gb|ACO11848.1| Proteasome subunit alpha type-5 [Lepeophtheirus salmonis]
gi|290462585|gb|ADD24340.1| Proteasome subunit alpha type-5 [Lepeophtheirus salmonis]
gi|290561585|gb|ADD38192.1| Proteasome subunit alpha type-5 [Lepeophtheirus salmonis]
Length = 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 45 AANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSL 104
A F E+ A P+ V +LLAG D E GP LY++D T + D A G GS +
Sbjct: 120 AIQFGDSEVKGAALSRPFGVALLLAGMD-ERGPQLYHMDPSGTYIRFDAKAIGSGSEGAQ 178
Query: 105 SMMDRHFHSGMSVEEAV 121
+ +HS MS++EA+
Sbjct: 179 QSLQEKYHSSMSMDEAI 195
>gi|150400488|ref|YP_001324254.1| proteasome endopeptidase complex protein [Methanococcus aeolicus
Nankai-3]
gi|302595768|sp|A6UT20.1|PSB_META3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013191|gb|ABR55642.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
Length = 217
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNG--IPLTTAAA--ANFTRGELATALR 58
+D + + +G GD I +LY+ R G IP + A +N G R
Sbjct: 51 IDDYMAMTIAGSVGDAQSLVRIISAEANLYKLRTGNNIPPHSCAMLLSNVLHGS-----R 105
Query: 59 KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDK-AAFGYGSYFSLSMMDRHFHSGMSV 117
P+++ +++ GYD G L+ +D + L++ A G GS + +++ + M++
Sbjct: 106 HFPFLIQLIIGGYDTIHGAKLFSLDAVGGLNEETSFTATGSGSPTAFGVLEEEYKKDMTI 165
Query: 118 EEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+ L K + R + + ++DK+G + Y+ E
Sbjct: 166 NKGKLLAIKSLTAAMKRDAFSGNGISLAVIDKNGVKIYSDEE 207
>gi|56118302|ref|NP_001007906.1| proteasome subunit beta type-1 [Gallus gallus]
gi|38680347|gb|AAR26544.1| proteasome subunit beta-type [Gallus gallus]
Length = 237
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RK 59
L +I SG GD + T+ I+ + +Y+ N +TT A A L+T L R
Sbjct: 70 LTEQTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAM----LSTILYSRRF 125
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF-------- 111
PY V ++ G D+E ++Y D + + + A G S ++D
Sbjct: 126 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQIGFKNMQNV 185
Query: 112 -HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
H +++E+A+ LV + R V I +V KDG +E
Sbjct: 186 EHVPLTLEKALQLVKDVFISAAERDVYTGDALKICVVTKDGIKE 229
>gi|219567024|dbj|BAH05030.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 275
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNSQRISVAAASKLL-CNMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 L 123
L
Sbjct: 226 L 226
>gi|410928748|ref|XP_003977762.1| PREDICTED: proteasome subunit beta type-11-like [Takifugu rubripes]
Length = 299
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+ SH ++ SG D + + + + LYQ R+G L+ A L + +
Sbjct: 122 IHSHLVVTCSGSGADCMMWRRILTRETRLYQLRHGRCLSIRGTAKLLSFMLH-PFKGTEV 180
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++L G+DK+ GP L Y+ + D + G GS ++ ++DR +S EEA
Sbjct: 181 CVALILCGWDKD-GPKLIYVCSDGARLQGDLFSVGSGSPYAYGVLDREQRWNLSKEEAFS 239
Query: 123 LVDKCILEIRSR 134
L + + R
Sbjct: 240 LAREAVFRATHR 251
>gi|407926751|gb|EKG19711.1| Proteasome alpha-subunit conserved site [Macrophomina phaseolina
MS6]
Length = 245
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRG-EL 53
+D H A SG D E + + F PL + A F G E
Sbjct: 70 IDRHIGCAMSGLQADARSMIEHARVESQNHAFHYNEPLRVESCTQAICDLALRFGEGAEG 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + + FH
Sbjct: 130 EESIMSRPFGVALLIAGYD-EDGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHK 188
Query: 114 GMSVEEAVDLVDKCILEI 131
+++ EA LV K + ++
Sbjct: 189 SLTLPEAEVLVLKTLKQV 206
>gi|195927408|pdb|3C91|H Chain H, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927409|pdb|3C91|I Chain I, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927410|pdb|3C91|J Chain J, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927411|pdb|3C91|K Chain K, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927412|pdb|3C91|L Chain L, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927413|pdb|3C91|M Chain M, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927414|pdb|3C91|N Chain N, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927422|pdb|3C91|V Chain V, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927423|pdb|3C91|W Chain W, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927424|pdb|3C91|X Chain X, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927425|pdb|3C91|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927426|pdb|3C91|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927427|pdb|3C91|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927428|pdb|3C91|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927436|pdb|3C92|H Chain H, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927437|pdb|3C92|I Chain I, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927438|pdb|3C92|J Chain J, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927439|pdb|3C92|K Chain K, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927440|pdb|3C92|L Chain L, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927441|pdb|3C92|M Chain M, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927442|pdb|3C92|N Chain N, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927450|pdb|3C92|V Chain V, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927451|pdb|3C92|W Chain W, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927452|pdb|3C92|X Chain X, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927453|pdb|3C92|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927454|pdb|3C92|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927455|pdb|3C92|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927456|pdb|3C92|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|262368054|pdb|3JRM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368055|pdb|3JRM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368056|pdb|3JRM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368057|pdb|3JRM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368058|pdb|3JRM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368059|pdb|3JRM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368060|pdb|3JRM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368080|pdb|3JSE|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368081|pdb|3JSE|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368082|pdb|3JSE|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368083|pdb|3JSE|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368084|pdb|3JSE|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368085|pdb|3JSE|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368086|pdb|3JSE|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368101|pdb|3JTL|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368102|pdb|3JTL|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368103|pdb|3JTL|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368104|pdb|3JTL|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368105|pdb|3JTL|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368106|pdb|3JTL|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368107|pdb|3JTL|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
Length = 203
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D++ + +G GD +++ + LY+ + + + A A L ++ PY
Sbjct: 37 IDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNML-NQVKYMPY 95
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
MV +L+ G D T P ++ ID + A+ G GS F +++ + M+V+E VD
Sbjct: 96 MVQLLVGGID--TAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVD 153
Query: 123 LVDKCILEIRSR 134
LV + I + R
Sbjct: 154 LVIRAISAAKQR 165
>gi|448445494|ref|ZP_21590392.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
gi|445685018|gb|ELZ37380.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
Length = 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 25 IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYDKETGPSLYYID 83
++ SLY+ R G ++ A + T G L LR Y+V +L G D E G +Y ID
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLT-GNL---LRSGAFYIVQPILGGVDDE-GAHIYSID 162
Query: 84 YIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
+ + + G GS ++L ++++ +H ++V+EA ++ K I R + +
Sbjct: 163 ALGGTTEEEYTVTGSGSQYALGVLEQEYHDDVTVDEATEIAAKAIQSAVERDLASGNGIN 222
Query: 144 IKIVDKDG 151
+ +V +G
Sbjct: 223 VAVVTDEG 230
>gi|354487488|ref|XP_003505905.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-8-like
[Cricetulus griseus]
Length = 271
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 105 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMLQYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + G G+ ++ +MD + +S EEA D
Sbjct: 164 SMGSMVCGWDKK-GPGLYYVDENGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYD 222
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 223 LGRRAIVHATHR 234
>gi|167998460|ref|XP_001751936.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697034|gb|EDQ83371.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 236
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 23 EFIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPS 78
+F Q+N+ L++ N ++ A+ L + R + ++AG+D ETGP
Sbjct: 70 QFWQRNLGTRCRLHELANKRHISVTGASKLLANTLYS-YRGMGLFMGTMIAGWD-ETGPG 127
Query: 79 LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE-------- 130
LYY+D K + + G GS ++ ++D F MS++EAV+L + I
Sbjct: 128 LYYVDSEGGRVKGTRFSVGSGSTYAYGVLDTVFKQDMSIDEAVELARRSIYHATLRDGAS 187
Query: 131 -----IRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTP 165
++ L+ P + K+ DG + V++TP
Sbjct: 188 GGVTLLKCSLLCGPSGWK-KMSGDDGGELHHSYYPVQETP 226
>gi|198424168|ref|XP_002121356.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 229
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNG-IPLTTAAAANFTRGELATALRKSP 61
L ++ ++A SG GD + + +Q + +Y+ +G P T+A AA ++ + R P
Sbjct: 63 LTANTVLAQSGFEGDSLTLKKHVQMRIGMYEHNHGKTPSTSAIAAMISK--MLYYKRFFP 120
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF------HSG- 114
Y V ++AG D E +Y D + + + A G + ++D +G
Sbjct: 121 YYVYNIVAGLDNEGKGCVYSYDPVGSYEREQYRAAGAANELLQPLLDNQIGFKNMSEAGP 180
Query: 115 -MSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
+S E AV L C + R + +I+++DKDG
Sbjct: 181 PLSKERAVQLCIDCFISAAERDITTGDCVLIQVIDKDG 218
>gi|340502310|gb|EGR29012.1| proteasome subunit beta type, putative [Ichthyophthirius
multifiliis]
Length = 286
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L +G D + +++ YQ ++G ++ AAA+ + + V +
Sbjct: 110 LGTMAGGAADCQFWEQYLAIQCRKYQLQHGERVSVAAASRILI-NILYGYKNQGLSVGCM 168
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
LAG+D + GP LYY+D + K D + G GS ++ ++D H+ +S++EAV+L +
Sbjct: 169 LAGWDNQ-GPQLYYLDNDGSRIKGDLFSVGSGSTYAYGVLDSHYKWDLSLKEAVELGKRA 227
Query: 128 I 128
I
Sbjct: 228 I 228
>gi|365757898|gb|EHM99769.1| Pre2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 287
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY K+ GP
Sbjct: 127 CQFWETWLGSQCRLHELREKERISVAAASKILS-NLVYQYKGAGLSMGTMVCGYTKKEGP 185
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 186 TIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAF 245
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 246 SGGSVNLYHVTEDG 259
>gi|47522620|ref|NP_999100.1| proteasome subunit beta type-8 [Sus scrofa]
gi|4545092|gb|AAD22390.1|AF059493_1 proteasome subunit LMP7 [Sus scrofa]
Length = 260
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 93 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMYQYRGMGL 151
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ +MD +S+EEA D
Sbjct: 152 SMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYD 210
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 211 LGRRAIVHATHR 222
>gi|380814846|gb|AFE79297.1| proteasome subunit beta type-8 isoform E2 proprotein [Macaca
mulatta]
Length = 276
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY++ T + + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVNEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYD 226
Query: 123 LVDKCILEIRSR 134
L K I R
Sbjct: 227 LGRKAIAHATHR 238
>gi|401840711|gb|EJT43416.1| PRE2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 287
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY K+ GP
Sbjct: 127 CQFWETWLGSQCRLHELREKERISVAAASKILS-NLVYQYKGAGLSMGTMVCGYTKKEGP 185
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 186 TIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAF 245
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 246 SGGSVNLYHVTEDG 259
>gi|354546103|emb|CCE42832.1| hypothetical protein CPAR2_204750 [Candida parapsilosis]
Length = 255
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%)
Query: 57 LRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMS 116
L P+ V +L+AG+DKE GP LY+ + T ++ D A G GS + + ++ +H +S
Sbjct: 133 LMSRPFGVALLIAGFDKEKGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELNNEYHKSLS 192
Query: 117 VEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYA 156
+++A L K + ++ + + + + +G + Y+
Sbjct: 193 LKDAELLALKILKQVMEEKLDCKNAQLASVTESEGFKIYS 232
>gi|350539311|ref|NP_001232140.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129774|gb|ACH46272.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129776|gb|ACH46274.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129778|gb|ACH46276.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129780|gb|ACH46278.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129781|gb|ACH46279.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129782|gb|ACH46280.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129783|gb|ACH46281.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RK 59
L +I +G GD + T+ I+ + +Y+ N +TT A A L+T L R
Sbjct: 71 LTERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAM----LSTILYSRRF 126
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF-------- 111
PY V ++ G D+E ++Y D + + + + A G S ++D
Sbjct: 127 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKNMQNV 186
Query: 112 -HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
H +++E+A+ LV + R V I IV KDG +E
Sbjct: 187 EHVPLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIKE 230
>gi|197129773|gb|ACH46271.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RK 59
L +I +G GD + T+ I+ + +Y+ N +TT A A L+T L R
Sbjct: 71 LTERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAM----LSTILYSRRF 126
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF-------- 111
PY V ++ G D+E ++Y D + + + + A G S ++D
Sbjct: 127 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKNMQNV 186
Query: 112 -HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
H +++E+A+ LV + R V I IV KDG +E
Sbjct: 187 EHVPLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIKE 230
>gi|18312192|ref|NP_558859.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74565305|sp|Q8ZYF2.1|PSB1_PYRAE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18159629|gb|AAL63041.1| proteasome beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 202
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H SG D F+ Y+ P+ +A N+ L + R Y
Sbjct: 38 IDDHVAATMSGGVADLQSVLSFLTLRAHEYKIEYKRPIPISALVNYMSLILFYS-RPYIY 96
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+V+ ++ G D+E G LY +D++ T+ K A G GS ++ ++ + M++E+AVD
Sbjct: 97 IVHSIIGGVDEEEGAVLYMVDWLGTVTKEKYIATGSGSPYAKGALEVGYREDMTLEDAVD 156
Query: 123 LVDKCI 128
L K +
Sbjct: 157 LAIKAV 162
>gi|195431433|ref|XP_002063746.1| GK15836 [Drosophila willistoni]
gi|194159831|gb|EDW74732.1| GK15836 [Drosophila willistoni]
Length = 283
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D V + + K +++ RN ++ AAA+ +A + + ++LAGY
Sbjct: 119 AGGAADCVYWDRVLAKECRMHELRNKERISVAAASKIM-ANIAHEYKNMGLSMGMMLAGY 177
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
DK GP LYY+D + + + G GS ++ ++D +H + EEA +L + I
Sbjct: 178 DKR-GPGLYYVDSEGSRTAGNLFSVGSGSLYAYGVLDSGYHWNLKDEEAQELGRRSI 233
>gi|258614012|ref|NP_542945.2| proteasome subunit beta type-8 [Rattus norvegicus]
gi|84028246|sp|P28064.3|PSB8_RAT RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Macropain subunit C13; AltName: Full=Multicatalytic
endopeptidase complex subunit C13; AltName:
Full=Proteasome component C13; AltName: Full=Proteasome
subunit beta-5i; Flags: Precursor
gi|46237562|emb|CAE83942.1| proteasome (prosome, macropain) subunit, beta type, 8 [Rattus
norvegicus]
gi|149043357|gb|EDL96808.1| proteosome (prosome, macropain) subunit, beta type 8, isoform CRA_a
[Rattus norvegicus]
Length = 276
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMLQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYD 226
Query: 123 LVDKCIL 129
L + I+
Sbjct: 227 LARRAIV 233
>gi|401623154|gb|EJS41261.1| pre2p [Saccharomyces arboricola H-6]
Length = 287
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY K+ GP
Sbjct: 127 CQFWETWLGSQCRLHELREKERISVAAASKILS-NLVYQYKGAGLSMGTMVCGYTKKEGP 185
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 186 TIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAF 245
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 246 SGGSVNLYHVTEDG 259
>gi|441594225|ref|XP_004087150.1| PREDICTED: proteasome subunit beta type-8 isoform 3 [Nomascus
leucogenys]
Length = 252
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 10 AASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLA 69
A++G D + + K LY RNG ++ +AA+ + R + ++
Sbjct: 92 ASAGSYIDCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGLSIGSMIC 150
Query: 70 GYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA DL + I
Sbjct: 151 GWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAI 208
>gi|197129784|gb|ACH46282.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RK 59
L +I +G GD + T+ I+ + +Y+ N +TT A A L+T L R
Sbjct: 71 LTERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAM----LSTILYSRRF 126
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF-------- 111
PY V ++ G D+E ++Y D + + + + A G S ++D
Sbjct: 127 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKNMQNV 186
Query: 112 -HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
H +++E+A+ LV + R V I IV KDG +E
Sbjct: 187 EHVPLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIKE 230
>gi|388496446|gb|AFK36289.1| unknown [Medicago truncatula]
Length = 186
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D H A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184
>gi|444321162|ref|XP_004181237.1| hypothetical protein TBLA_0F01760 [Tetrapisispora blattae CBS 6284]
gi|387514281|emb|CCH61718.1| hypothetical protein TBLA_0F01760 [Tetrapisispora blattae CBS 6284]
Length = 287
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY K+ GP
Sbjct: 127 CQFWETWLGSQCRLHELREKERISVAAASKILS-NLVYQYKGAGLSMGTMICGYTKKEGP 185
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSR 134
++YY+D T K D G G F+ ++D ++ ++VEEA+ L + IL R
Sbjct: 186 TIYYVDSDGTRLKGDLFCVGSGQTFAYGVLDSNYKWDLTVEEALYLGKRSILAATHR 242
>gi|219567056|dbj|BAH05046.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
gi|219567060|dbj|BAH05048.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 275
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 L 123
L
Sbjct: 226 L 226
>gi|323306838|gb|EGA60123.1| Pre2p [Saccharomyces cerevisiae FostersO]
Length = 168
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY ++ GP
Sbjct: 8 CQFWETWLGSQCRLHELREKERISVAAASKILS-NLVYQYKGAGLSMGTMICGYTRKEGP 66
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 67 TIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAY 126
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 127 SGGSVNLYHVTEDG 140
>gi|201066706|gb|ACH92666.1| 20S proteasome subunit alpha 5 [Leishmania donovani]
Length = 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 18/169 (10%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAA--------NFTRGE 52
M +DSH SG D E + ++F P++ + F G
Sbjct: 68 MEIDSHIATVMSGMVADARILVEHARVESQNHRFTYNEPMSVESCTLATCDLSIQFGEGG 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
L P+ V++L+AG D E GP L+ D T + D A G G+ + S+ +H
Sbjct: 128 GKRKLMSRPFGVSLLIAGVD-EKGPQLWQTDPSGTHTRYDAQAIGGGAEAAQSVFTERYH 186
Query: 113 SGMSVEE----AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAW 157
M++EE AVD++ K ++E + ++P N + +V D + + +
Sbjct: 187 RNMTLEEGETLAVDIL-KQVMEDQ----LSPENIEVAVVRADDGKLHMY 230
>gi|402076365|gb|EJT71788.1| proteasome component PRE3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 229
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + L+ NG P TT AA + E+ + K +++AG+
Sbjct: 75 SGSAADTQAVADIVQYQLGLFHMMNGKPPTTQTAAAIFQ-EMCYS-NKDRLSAGLIIAGW 132
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM +EAV V + E
Sbjct: 133 DERHGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWREGMEEKEAVAFVKGALGE 191
>gi|238880089|gb|EEQ43727.1| proteasome component PUP2 [Candida albicans WO-1]
Length = 253
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 45 AANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSL 104
A F G L P+ V +L+AG DKE GP LY+ + T ++ + A G GS +
Sbjct: 119 ALRFGEGAGGKRLMSRPFGVALLIAGVDKEKGPQLYHAEPSGTFYRYEAKAIGSGSEGAQ 178
Query: 105 SMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGA 152
+ ++ +H ++++EA L K + ++ + N + V KDG
Sbjct: 179 AELNNEYHKSLTLKEAELLALKILKQVMEEKLDC-KNAQLASVTKDGG 225
>gi|367014735|ref|XP_003681867.1| hypothetical protein TDEL_0E04130 [Torulaspora delbrueckii]
gi|359749528|emb|CCE92656.1| hypothetical protein TDEL_0E04130 [Torulaspora delbrueckii]
Length = 219
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q ++ LY + G P T AAA F EL K I++AGY
Sbjct: 69 SGSAADTQAIADIVQYHLDLYTAQYGEPSTKTAAAVFK--ELCYE-NKDNLTAGIIVAGY 125
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
D++ +Y I ++HK A G GS F D++F M+ +E V+ +
Sbjct: 126 DEKNKGEVYSIPLGGSMHKQKYAIAGSGSTFIYGYCDKNFKDDMTKDETVNFM 178
>gi|342181371|emb|CCC90850.1| putative proteasome beta-1 subunit [Trypanosoma congolense IL3000]
Length = 282
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 14/129 (10%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYM------VN 65
SG D E + Y+ P+ A+AAN +K YM
Sbjct: 100 SGSAADTQALAELTANYLEGYEADTSRPVNVASAANI--------FKKLCYMNRWAISAG 151
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I++AGYD G S+Y I + K+D A G GS F S D ++ GM+ +E + L
Sbjct: 152 IIVAGYDSVNGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKPGMTKDECIRLCQ 211
Query: 126 KCILEIRSR 134
+ + SR
Sbjct: 212 RAVAHAYSR 220
>gi|219567016|dbj|BAH05026.1| proteasome subunit, beta type 8 [Oryzias luzonensis]
gi|224473834|gb|ACN49173.1| proteasome associated anitgen processing [Oryzias luzonensis]
Length = 275
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 L 123
L
Sbjct: 226 L 226
>gi|225684870|gb|EEH23154.1| V Chain V [Paracoccidioides brasiliensis Pb03]
Length = 198
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + + ++ +Y N P TT AA + EL K I++AGY
Sbjct: 43 SGSAADTQAVADIVHYHLGMYGIVNKEPPTTQTAAALFQ-ELCYD-NKDMLRAGIIIAGY 100
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM+ EE ++ V + E
Sbjct: 101 DQRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQE 159
>gi|225192946|dbj|BAH29701.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 105 INPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLL-CNMMLGYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 164 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 222
Query: 123 L 123
L
Sbjct: 223 L 223
>gi|73535606|pdb|1YA7|H Chain H, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535607|pdb|1YA7|I Chain I, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535608|pdb|1YA7|J Chain J, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535609|pdb|1YA7|K Chain K, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535610|pdb|1YA7|L Chain L, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535611|pdb|1YA7|M Chain M, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535612|pdb|1YA7|N Chain N, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535645|pdb|1YAR|H Chain H, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535646|pdb|1YAR|I Chain I, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535647|pdb|1YAR|J Chain J, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535648|pdb|1YAR|K Chain K, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535649|pdb|1YAR|L Chain L, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535650|pdb|1YAR|M Chain M, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535651|pdb|1YAR|N Chain N, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535666|pdb|1YAU|H Chain H, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535667|pdb|1YAU|I Chain I, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535668|pdb|1YAU|J Chain J, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535669|pdb|1YAU|K Chain K, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535670|pdb|1YAU|L Chain L, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535671|pdb|1YAU|M Chain M, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535672|pdb|1YAU|N Chain N, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|282403716|pdb|3IPM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403717|pdb|3IPM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403718|pdb|3IPM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403719|pdb|3IPM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403720|pdb|3IPM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403721|pdb|3IPM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403722|pdb|3IPM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
Length = 217
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D++ + +G GD +++ + LY+ + + + A A L ++ PY
Sbjct: 45 IDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNML-NQVKYMPY 103
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
MV +L+ G D T P ++ ID + A+ G GS F +++ + M+V+E VD
Sbjct: 104 MVQLLVGGID--TAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVD 161
Query: 123 LVDKCILEIRSR 134
LV + I + R
Sbjct: 162 LVIRAISAAKQR 173
>gi|403264182|ref|XP_003924370.1| PREDICTED: proteasome subunit beta type-5 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403264184|ref|XP_003924371.1| PREDICTED: proteasome subunit beta type-5 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403264186|ref|XP_003924372.1| PREDICTED: proteasome subunit beta type-5 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 263
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ LA + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKL----LANMVYQYKG 151
Query: 63 M---VNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSV 117
M + ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + V
Sbjct: 152 MGLSMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEV 208
Query: 118 EEAVDLVDKCILEIRSR 134
EEA DL + I + R
Sbjct: 209 EEAYDLARRAIYQATYR 225
>gi|16081708|ref|NP_394085.1| proteasome, beta chain [Thermoplasma acidophilum DSM 1728]
gi|130867|sp|P28061.1|PSB_THEAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1633360|pdb|1PMA|B Chain B, Proteasome From Thermoplasma Acidophilum
gi|1633374|pdb|1PMA|P Chain P, Proteasome From Thermoplasma Acidophilum
gi|1633375|pdb|1PMA|Q Chain Q, Proteasome From Thermoplasma Acidophilum
gi|1633376|pdb|1PMA|R Chain R, Proteasome From Thermoplasma Acidophilum
gi|1633377|pdb|1PMA|S Chain S, Proteasome From Thermoplasma Acidophilum
gi|1633378|pdb|1PMA|T Chain T, Proteasome From Thermoplasma Acidophilum
gi|1633379|pdb|1PMA|U Chain U, Proteasome From Thermoplasma Acidophilum
gi|1633380|pdb|1PMA|V Chain V, Proteasome From Thermoplasma Acidophilum
gi|1633381|pdb|1PMA|W Chain W, Proteasome From Thermoplasma Acidophilum
gi|1633382|pdb|1PMA|X Chain X, Proteasome From Thermoplasma Acidophilum
gi|1633383|pdb|1PMA|Y Chain Y, Proteasome From Thermoplasma Acidophilum
gi|1633384|pdb|1PMA|Z Chain Z, Proteasome From Thermoplasma Acidophilum
gi|1633385|pdb|1PMA|1 Chain 1, Proteasome From Thermoplasma Acidophilum
gi|1633386|pdb|1PMA|2 Chain 2, Proteasome From Thermoplasma Acidophilum
gi|154680|gb|AAA72102.1| proteasome beta-subunit [Thermoplasma acidophilum]
gi|10639779|emb|CAC11751.1| proteasome, beta chain [Thermoplasma acidophilum]
Length = 211
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D++ + +G GD +++ + LY+ + + + A A L ++ PY
Sbjct: 45 IDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNML-NQVKYMPY 103
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
MV +L+ G D T P ++ ID + A+ G GS F +++ + M+V+E VD
Sbjct: 104 MVQLLVGGID--TAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVD 161
Query: 123 LVDKCILEIRSR 134
LV + I + R
Sbjct: 162 LVIRAISAAKQR 173
>gi|195382663|ref|XP_002050049.1| GJ21921 [Drosophila virilis]
gi|194144846|gb|EDW61242.1| GJ21921 [Drosophila virilis]
Length = 279
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D V + + K L++ RN ++ AAA+ +A + + ++LAGY
Sbjct: 119 AGGAADCVYWDRVLAKECRLHELRNKERISVAAASKIM-ANIAHEYKGMGLSMGMMLAGY 177
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
DK GP LYY+D + + + G GS ++ ++D +H + EA +L + I
Sbjct: 178 DKR-GPGLYYVDSEGSRTPGNVFSVGSGSIYAFGVLDSGYHWDLKDTEAQELGRRAIYHA 236
Query: 132 R---------SRLVVAPPNFVIKIVDKDGAR-EYAWRESVK 162
R+ PN IKI + D Y ++E K
Sbjct: 237 TFRDAYSGGIVRVYHMTPNGWIKISETDCMELHYKYKEQNK 277
>gi|85105938|ref|XP_962066.1| proteasome component PUP2 [Neurospora crassa OR74A]
gi|28923660|gb|EAA32830.1| proteasome component PUP2 [Neurospora crassa OR74A]
gi|336471729|gb|EGO59890.1| proteasome component PUP2 [Neurospora tetrasperma FGSC 2508]
gi|350292846|gb|EGZ74041.1| proteasome component PUP2 [Neurospora tetrasperma FGSC 2509]
Length = 245
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + + +H +++E+A
Sbjct: 137 PFGVALLIAGYD-EDGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLTLEDA 195
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKD-GAREYAWRE 159
LV K + ++ + A N + V KD G R Y E
Sbjct: 196 ETLVLKTLKQVMEEKLDA-KNVQLASVTKDKGFRIYTDEE 234
>gi|432883660|ref|XP_004074316.1| PREDICTED: proteasome subunit beta type-8-like [Oryzias latipes]
Length = 195
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L + SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 35 INPYLLGSMSGSAADCQYWERLLAKEYRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 93
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 94 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 152
Query: 123 L 123
L
Sbjct: 153 L 153
>gi|390468855|ref|XP_002753673.2| PREDICTED: proteasome subunit beta type-5 [Callithrix jacchus]
Length = 263
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ LA + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKL----LANMVYQYKG 151
Query: 63 M---VNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSV 117
M + ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + V
Sbjct: 152 MGLSMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEV 208
Query: 118 EEAVDLVDKCILEIRSR 134
EEA DL + I + R
Sbjct: 209 EEAYDLARRAIYQATYR 225
>gi|426352665|ref|XP_004043830.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Gorilla
gorilla gorilla]
Length = 160
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + + K LY RNG ++ +AA+ + R + ++ G+
Sbjct: 2 SGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGLSMGSMICGW 60
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA DL + I
Sbjct: 61 DKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAI 116
>gi|348561415|ref|XP_003466508.1| PREDICTED: proteasome subunit beta type-1-like [Cavia porcellus]
Length = 241
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RK 59
L +I SG GD + T+ I+ + +Y+ N +TT A A L+T L R
Sbjct: 74 LTDRTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAM----LSTILYSRRF 129
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF-------- 111
PY V ++ G D+E ++Y D + + + A G S ++D
Sbjct: 130 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNV 189
Query: 112 -HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
H +S++ A+ LV + R V I IV KDG RE
Sbjct: 190 EHVPLSLDRAMRLVKDVFISAAERDVYTGDALKICIVTKDGIRE 233
>gi|226287754|gb|EEH43267.1| proteasome component PRE3 [Paracoccidioides brasiliensis Pb18]
Length = 232
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + + ++ +Y N P TT AA + EL K I++AGY
Sbjct: 77 SGSAADTQAVADIVHYHLGMYGIVNKEPPTTQTAAALFQ-ELCYD-NKDMLRAGIIIAGY 134
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM+ EE ++ V + E
Sbjct: 135 DQRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQE 193
>gi|417398242|gb|JAA46154.1| Putative 20s proteasome regulatory subunit beta type [Desmodus
rotundus]
Length = 276
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY++ T + G G+ ++ +MD + +S+EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVNENGTRLSGSMFSTGSGNSYAYGVMDSGYRPDLSLEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 227 LGRRAIVHATHR 238
>gi|417397679|gb|JAA45873.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Desmodus rotundus]
Length = 240
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RK 59
L +I SG GD + T+ I+ + +Y+ N +TT A A L+T L R
Sbjct: 73 LTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAM----LSTILYSRRF 128
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF-------- 111
PY V ++ G D+E ++Y D + + + A G S ++D
Sbjct: 129 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNV 188
Query: 112 -HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
H ++++ A+ LV + R V I IV KDG RE
Sbjct: 189 EHVPLTLDRAMRLVKDVFISAAERDVYTGDTLKICIVTKDGIRE 232
>gi|196004606|ref|XP_002112170.1| hypothetical protein TRIADDRAFT_23895 [Trichoplax adhaerens]
gi|190586069|gb|EDV26137.1| hypothetical protein TRIADDRAFT_23895 [Trichoplax adhaerens]
Length = 259
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS---GMS 116
+P NI++ GYD+ G L Y+D + ++ A GYGSY + ++ + + S +
Sbjct: 143 NPLWNNIIVGGYDENEGSYLGYVDKLGVAYQAPTIATGYGSYIAQPLLRQSYESNNNNFT 202
Query: 117 VEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
E+A+ +++C+ + R + + + I+ KDG +
Sbjct: 203 EEQALSAIERCMRVLLYRDGRSGNQYEVAIITKDGCQ 239
>gi|449547489|gb|EMD38457.1| 20S proteasome subunit [Ceriporiopsis subvermispora B]
Length = 313
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + ++ L++ RN ++ AAA+ F ++
Sbjct: 119 INPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKFLSNLVSNYKGMGLS 178
Query: 63 MV-NILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
MV ++ G+DK TGP+++Y+D T K D + G GS F+ ++D+ + ++ EEA
Sbjct: 179 MVKGTMICGWDK-TGPAIFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDEEAQ 237
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
+L + I R + + V +DG R
Sbjct: 238 ELGRRSIYAAGHRDAFSGNTINLYHVKEDGWR 269
>gi|367012307|ref|XP_003680654.1| hypothetical protein TDEL_0C05540 [Torulaspora delbrueckii]
gi|359748313|emb|CCE91443.1| hypothetical protein TDEL_0C05540 [Torulaspora delbrueckii]
Length = 287
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D + ++ L++ + ++ AAA+ L + + + ++ GY
Sbjct: 121 AGGAADCQYWETWLGAQCRLHELKEKERISVAAASKILS-NLVYQYKGAGLSMGTMICGY 179
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
K+ GP++YY+D T K D G G F+ ++D ++ + VEEA++L + IL
Sbjct: 180 TKKEGPTVYYVDSDGTRLKGDLFCVGSGQTFAYGVLDANYKWELGVEEALELGKRSILAA 239
Query: 132 RSRLVVAPPNFVIKIVDKDG 151
R + + + V +DG
Sbjct: 240 THRDAYSGGSVNLYHVTEDG 259
>gi|19113087|ref|NP_596295.1| 20S proteasome component beta 1 Pre3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|17380244|sp|O43063.1|PSB1_SCHPO RecName: Full=Probable proteasome subunit beta type-1; Flags:
Precursor
gi|2832891|emb|CAA16832.1| 20S proteasome component beta 1 Pre3 (predicted)
[Schizosaccharomyces pombe]
Length = 226
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RKSPYMVNILL 68
SG D + ++ +S+Y+ + G + AA LA+ + K+ +++
Sbjct: 70 SGSAADTQTVADLLKYYLSMYRIQFGHDPSVHTAAT-----LASEMCYQNKNMLSAGLIV 124
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
AGYD++TG +Y I +LHK A G GS F D +F M+ EEAV+ + +
Sbjct: 125 AGYDEKTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAV 184
Query: 129 LEIRSRLVVAPPNFVIKIVDKDG-AREYAWRESVKDTPV 166
R + + I++KDG R++ ++ PV
Sbjct: 185 ALAMERDGSSGGTIRMVILNKDGMERKFFAIDTANPIPV 223
>gi|407465690|ref|YP_006776572.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407048878|gb|AFS83630.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 210
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 58 RKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSV 117
R P+M +ILL GYD GPSL+ +D ++ + G GS + +++ + +++
Sbjct: 103 RGYPFMADILLGGYDA-NGPSLFNVDMFGSVEEKSYVTTGSGSPVAYGLLEEEYKEDLTI 161
Query: 118 EEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
EEA + + + R + I I+DKDG R
Sbjct: 162 EEAKQVALRAVKAAIVRNIGTGDGINIAIMDKDGFR 197
>gi|296785033|ref|NP_001171881.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|18157533|dbj|BAB83848.1| PSMB8-A [Oryzias latipes]
gi|295901497|dbj|BAJ07261.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|295901536|dbj|BAJ07285.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|295901538|dbj|BAJ07286.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 275
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 L 123
L
Sbjct: 226 L 226
>gi|412986310|emb|CCO14736.1| predicted protein [Bathycoccus prasinos]
Length = 311
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 23 EFIQKNVS----LYQFRNGIPLTTAAAANFTRGELATAL---RKSPYMVNILLAGYDKET 75
+F Q+N+ L++ G +T A+ LA L R + ++AG+D T
Sbjct: 118 QFWQRNLGIQCRLHELETGKRITVTGASKL----LANTLYGYRGRGLSMGTMVAGWDT-T 172
Query: 76 GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRL 135
GP L+Y+D T K + + G GS F+ ++D+ F +S++EA +L + I R
Sbjct: 173 GPGLFYVDSDGTRLKGKRFSVGSGSLFAYGVLDQGFRHDLSIKEAAELGRRAIYHATFRD 232
Query: 136 VVAPPNFVIKIVDKDG 151
+ + V DG
Sbjct: 233 AFSGGTVSVYHVGPDG 248
>gi|397572438|gb|EJK48257.1| hypothetical protein THAOC_32963 [Thalassiosira oceanica]
Length = 248
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 24 FIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSL 79
F ++N+ +Y+ RN ++ AAA+ + + R + ++ G+D ETGP L
Sbjct: 92 FWERNLGIQCRMYELRNKKRISVAAASKLLANTMRS-YRGYGLSMGTMITGWD-ETGPQL 149
Query: 80 YYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAP 139
YY+D T + G GS ++ ++D ++ ++VEEA+DL + I R ++
Sbjct: 150 YYVDDDGTRLHGRYFSVGSGSTYAYGVLDTYYRPDLTVEEAIDLGKRAIYHACHRDAMSG 209
Query: 140 PNFVIKIVDKDG 151
+ V KDG
Sbjct: 210 SINNLYHVTKDG 221
>gi|225192981|dbj|BAH29681.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 226 LGRRGIAHATHR 237
>gi|119481163|ref|XP_001260610.1| proteasome component Pup2, putative [Neosartorya fischeri NRRL 181]
gi|119408764|gb|EAW18713.1| proteasome component Pup2, putative [Neosartorya fischeri NRRL 181]
Length = 252
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAAAANFT-----RGEL 53
+D H A SG D E + + F PL TT A + G+
Sbjct: 76 IDQHIGCAMSGLQADARSLVEHARVECQNHAFHYAEPLRVESTTQAICDLALRFGETGDD 135
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GP LY+ + T ++ D A G GS + + + +H
Sbjct: 136 DESVMSRPFGVALLIAGYD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHR 194
Query: 114 GMSVEEAVDLVDKCILEI 131
+++ EA LV K + ++
Sbjct: 195 SLTLPEAETLVLKTLKQV 212
>gi|6755204|ref|NP_035316.1| proteasome subunit beta type-5 [Mus musculus]
gi|187608891|sp|O55234.3|PSB5_MOUSE RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain epsilon chain; AltName:
Full=Multicatalytic endopeptidase complex epsilon chain;
AltName: Full=Proteasome chain 6; AltName:
Full=Proteasome epsilon chain; AltName: Full=Proteasome
subunit X; Flags: Precursor
gi|5757659|gb|AAD50536.1|AF060091_1 proteasome subunit X [Mus musculus]
gi|2897806|dbj|BAA24916.1| PSMB5 [Mus musculus]
gi|2897809|dbj|BAA24917.1| PSMB5 [Mus musculus]
gi|74228773|dbj|BAE21876.1| unnamed protein product [Mus musculus]
gi|77415527|gb|AAI06145.1| Proteasome (prosome, macropain) subunit, beta type 5 [Mus musculus]
gi|148704392|gb|EDL36339.1| mCG8712, isoform CRA_b [Mus musculus]
Length = 264
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ AF G GS ++ +MDR + + VEEA
Sbjct: 155 SMGTMICGWDKR-GPGLYYVD--SEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEA 211
Query: 121 VDLVDKCILEIRSR 134
DL + I + R
Sbjct: 212 YDLARRAIYQATYR 225
>gi|171688558|ref|XP_001909219.1| hypothetical protein [Podospora anserina S mat+]
gi|170944241|emb|CAP70351.1| unnamed protein product [Podospora anserina S mat+]
Length = 245
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + + +H +++E+A
Sbjct: 137 PFGVALLIAGYD-EDGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLTIEDA 195
Query: 121 VDLVDKCILEI 131
LV K + ++
Sbjct: 196 ETLVLKTLKQV 206
>gi|386868059|dbj|BAM15299.1| proteasome subunit beta type 8, partial [Triakis scyllium]
Length = 202
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ +AA+ + R
Sbjct: 59 INPYLLGTMSGSAADCQYWERLLAKQCRLYKLRNKQRISVSAASKLLS-NMMCEYRGMGL 117
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ ++D + + VEEA D
Sbjct: 118 SMGSMICGWDKK-GPGLYYVDDNGTRLSGNMFSTGCGNCYAYGVVDSGYRYDLGVEEACD 176
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 177 LARRAIYHATHR 188
>gi|348541149|ref|XP_003458049.1| PREDICTED: proteasome subunit beta type-8-like [Oreochromis
niloticus]
Length = 275
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLS-NMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYREDMTVEEAYE 225
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 226 LGRRGIAHATHR 237
>gi|115384510|ref|XP_001208802.1| proteasome component PUP2 [Aspergillus terreus NIH2624]
gi|114196494|gb|EAU38194.1| proteasome component PUP2 [Aspergillus terreus NIH2624]
Length = 246
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 10/166 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAAAANFT-----RGEL 53
+D H A SG D E + + F PL T A + G+
Sbjct: 70 IDQHIGCAMSGLQADARNLVEHARVECQNHAFHYAEPLRVESCTQAICDLALRFGETGDD 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GP LY+ + T ++ D A G GS + + + +H
Sbjct: 130 EESVMSRPFGVALLIAGYD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHR 188
Query: 114 GMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+++ EA LV K + ++ + A + + + G R Y E
Sbjct: 189 SLTLAEAETLVLKTLKQVMEEKLDAKNVQLASVTKEKGFRIYNDEE 234
>gi|303283522|ref|XP_003061052.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457403|gb|EEH54702.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 286
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 22 TEFIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
+F Q+N+ L++ NG ++ + A+ L R + ++AG+D GP
Sbjct: 111 CQFWQRNLGIQCRLHELENGKRISVSGASKLLSNTL-YGYRGQGLSMGTMVAGWDL-NGP 168
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
LYY+D T K + + G GS F+ ++D+ + +SVE+A +L + I R
Sbjct: 169 GLYYVDSDGTRLKGKRFSVGSGSLFAYGVLDQGYRWDLSVEDACELGRRAIYHATFRDAF 228
Query: 138 APPNFVIKIVDKDG 151
+ + V DG
Sbjct: 229 SGGTVSVYHVGPDG 242
>gi|15126628|gb|AAH12246.1| Proteasome (prosome, macropain) subunit, beta type 5 [Mus musculus]
Length = 264
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ AF G GS ++ +MDR + + VEEA
Sbjct: 155 SMGTMICGWDKR-GPGLYYVD--SEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEA 211
Query: 121 VDLVDKCILEIRSR 134
DL + I + R
Sbjct: 212 YDLARRAIYQATYR 225
>gi|358055465|dbj|GAA98585.1| hypothetical protein E5Q_05272 [Mixia osmundae IAM 14324]
Length = 299
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D + ++ LY+ N ++ AAA+ + L + + ++ G+
Sbjct: 120 AGGAADCQYWETYLGIQCRLYELANKQRISVAAASKYLS-NLVYGYKGQGLSMGTMICGW 178
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
DK TGP+L+Y+D + K D + G GS F+ ++D+ + ++ EEA DL + I
Sbjct: 179 DK-TGPALFYVDSDGSRMKGDVFSVGSGSTFAYGVLDQGYKWDLTDEEAYDLGARSIYAA 237
Query: 132 RSRLVVAPPNFVIKIVDKDG 151
R + + + V +DG
Sbjct: 238 MHRDAFSGNSLNMYHVKEDG 257
>gi|237844335|ref|XP_002371465.1| proteasome A-type and B-type domain-containing protein [Toxoplasma
gondii ME49]
gi|211969129|gb|EEB04325.1| proteasome A-type and B-type domain-containing protein [Toxoplasma
gondii ME49]
gi|221481258|gb|EEE19655.1| proteasome A-type and B-type domain-containing protein, putative
[Toxoplasma gondii GT1]
Length = 266
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 22/145 (15%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR------NGIPLTTAAAANFTRGELAT 55
L SH +A++G+ D + +++ +S Y + N + AA +R
Sbjct: 71 TLGSHTAVASTGDYSDH----QMMERTLSRYALKDFLHDDNSVRTAHQYAALLSRLMYQK 126
Query: 56 ALRKSPYMVNILLAGYDKETGP------------SLYYIDYIATLHKVDKAAFGYGSYFS 103
R P+ +++++AGY E +L Y+D T ++ + A G G YF+
Sbjct: 127 RSRMDPWWLSVVVAGYQGERSEAREVSEEQKKPFTLGYVDMYGTFYEEEVIATGLGRYFA 186
Query: 104 LSMMDRHFHSGMSVEEAVDLVDKCI 128
+++M MS EEA L+++C+
Sbjct: 187 VTLMRNRHRPDMSEEEARQLLEECM 211
>gi|209875265|ref|XP_002139075.1| proteasome subunit beta type 5 precursor [Cryptosporidium muris
RN66]
gi|209554681|gb|EEA04726.1| proteasome subunit beta type 5 precursor, putative [Cryptosporidium
muris RN66]
Length = 279
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++++ L +G D + + K L++ RN ++ A A+N + R
Sbjct: 105 INNYLLGTMAGGAADCSYWERVLAKLCRLHELRNKQRISVAGASNLI-ANIFFHYRNYGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
I+++GYDK GP LYY+D K ++ + G GS +++ ++D H ++ E+A++
Sbjct: 164 SAGIMISGYDK-NGPQLYYVDNSGARVKGNRFSIGSGSVYAIGVLDSVHHFDLTDEDAIE 222
Query: 123 LVDKCI 128
L + I
Sbjct: 223 LGRRAI 228
>gi|426376395|ref|XP_004054986.1| PREDICTED: proteasome subunit beta type-5 isoform 7 [Gorilla
gorilla gorilla]
Length = 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYM---VNILL 68
+G D + + + +Y+ RN ++ AAA+ LA + + M + ++
Sbjct: 2 AGGAADCSFWERLLARQCRIYELRNKERISVAAASKL----LANMVYQYKGMGLSMGTMI 57
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
G+DK GP LYY+D + +++ A F G GS ++ +MDR + + VE+A DL +
Sbjct: 58 CGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARR 114
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
I + R + + V +DG
Sbjct: 115 AIYQATYRDAYSGGAVNLYHVREDG 139
>gi|3114280|pdb|1RYP|L Chain L, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114294|pdb|1RYP|Z Chain Z, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|14488816|pdb|1FNT|L Chain L, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488830|pdb|1FNT|Z Chain Z, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765710|pdb|1Z7Q|L Chain L, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765724|pdb|1Z7Q|Z Chain Z, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|298508233|pdb|1VSY|L Chain L, Proteasome Activator Complex
gi|298508247|pdb|1VSY|Z Chain Z, Proteasome Activator Complex
gi|298508449|pdb|3L5Q|P Chain P, Proteasome Activator Complex
gi|298508463|pdb|3L5Q|2 Chain 2, Proteasome Activator Complex
Length = 212
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY ++ GP
Sbjct: 52 CQFWETWLGSQCRLHELREKERISVAAASKILS-NLVYQYKGAGLSMGTMICGYTRKEGP 110
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 111 TIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAY 170
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 171 SGGSVNLYHVTEDG 184
>gi|295658156|ref|XP_002789640.1| proteasome component PRE3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283125|gb|EEH38691.1| proteasome component PRE3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 214
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + + ++ +Y N P TT AA + EL K I++AGY
Sbjct: 43 SGSAADTQAVADIVHYHLGMYGIVNKEPPTTQTAAALFQ-ELCYD-NKDMLSAGIIIAGY 100
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM+ EE ++ V + E
Sbjct: 101 DQRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQE 159
>gi|62319253|dbj|BAD94476.1| hypothetical protein [Arabidopsis thaliana]
Length = 117
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 48 FTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMM 107
F GE + R P+ V++L+AG+D E GPSLYY D T + + A G GS + S +
Sbjct: 3 FGEGEEESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSL 59
Query: 108 DRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
F+ +S++EA + + ++ V PN V
Sbjct: 60 QEQFNKDLSLQEAETIAVSILKQVMEEKVT--PNNV 93
>gi|367022734|ref|XP_003660652.1| hypothetical protein MYCTH_2299195 [Myceliophthora thermophila ATCC
42464]
gi|347007919|gb|AEO55407.1| hypothetical protein MYCTH_2299195 [Myceliophthora thermophila ATCC
42464]
Length = 245
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAAAANFTR--GELA-- 54
+D H A SG D E + + F PL T A + GE A
Sbjct: 70 IDRHIGCAMSGLQADARSMVEHARVECQSHAFNYNEPLRVESCTQAICDLALRFGESADG 129
Query: 55 -TALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + + +H
Sbjct: 130 EESVMSRPFGVALLIAGYD-EDGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHK 188
Query: 114 GMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+++ +A LV K + ++ + A + + + G R Y E
Sbjct: 189 SLTIADAETLVLKTLKQVMEEKLDAKNVQLASVTKERGFRIYTDEE 234
>gi|440909598|gb|ELR59487.1| Proteasome subunit beta type-8 [Bos grunniens mutus]
Length = 276
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY++ T + + G G+ + +MD + +S+EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVNDSGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 227 LGRRAIVHATHR 238
>gi|393239729|gb|EJD47259.1| 20S proteasome subunit [Auricularia delicata TFB-10046 SS5]
Length = 309
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYM---VNILL 68
+G D + ++ LY+ R G ++ AAA+ + L +R+ M + ++
Sbjct: 120 AGTAADCQYWETYLGMQCRLYELREGQRISVAAASKY----LVNLVRRYKGMGISMGTMI 175
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
G+DK TGP+LYY+D T K D + G GS F+ ++D + ++ EA +L + I
Sbjct: 176 CGWDK-TGPALYYVDSDGTRLKGDLFSVGSGSTFAYGILDPEYRWDLTDAEAQELGRRAI 234
>gi|195539356|ref|NP_001124197.1| proteasome subunit beta type-5 isoform 2 [Homo sapiens]
gi|332223028|ref|XP_003260673.1| PREDICTED: proteasome subunit beta type-5 isoform 4 [Nomascus
leucogenys]
Length = 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYM---VNILL 68
+G D + + + +Y+ RN ++ AAA+ LA + + M + ++
Sbjct: 2 AGGAADCSFWERLLARQCRIYELRNKERISVAAASKL----LANMVYQYKGMGLSMGTMI 57
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
G+DK GP LYY+D + +++ A F G GS ++ +MDR + + VE+A DL +
Sbjct: 58 CGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARR 114
Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
I + R + + V +DG
Sbjct: 115 AIYQATYRDAYSGGAVNLYHVREDG 139
>gi|353236461|emb|CCA68455.1| probable PRE2-20S core proteasome subunit (beta5) (C-terminal
fragment) [Piriformospora indica DSM 11827]
Length = 298
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D + ++ L++ RN ++ AAA+ + L + + + ++ G+
Sbjct: 124 AGGAADCQYWETYLGIQCRLHELRNRERISVAAASKYLS-NLVYSYKGMGLSMGTMICGW 182
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
DK TGP+L+Y+D T K D + G GS F+ ++D+ +H +S E+A +L + I
Sbjct: 183 DK-TGPALFYVDSDGTRLKGDVFSVGSGSTFAYGVLDQGYHWELSDEDAQELGRRSIYAA 241
Query: 132 RSR 134
R
Sbjct: 242 GHR 244
>gi|315518883|dbj|BAJ51774.1| proteasome subunit, beta type 8 [Oryzias dancena]
Length = 238
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 71 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLS-NMMLGYRGMGL 129
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 130 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTVEEAYE 188
Query: 123 L 123
L
Sbjct: 189 L 189
>gi|281208762|gb|EFA82937.1| proteasome subunit beta type 5 [Polysphondylium pallidum PN500]
Length = 277
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAA----ANFTRGELATALRKSPYM 63
L +G D + + + L++ RN ++ AAA AN G L
Sbjct: 104 LGTMAGGAADCSYWERELGRQCRLFELRNKEMISVAAASKILANIVYGYKGYGLS----- 158
Query: 64 VNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDL 123
+ ++ G+DK TGP LYY+D T K + A G GS ++ ++D F M+ E+A +L
Sbjct: 159 MGTMVTGWDK-TGPCLYYVDSEGTRLKGLRFAVGSGSTYAYGVLDSGFDWNMTDEQACEL 217
Query: 124 VDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
+ + R ++ + V KDG ++
Sbjct: 218 GRRSVYHATHRDAMSGGFINVYHVQKDGWKK 248
>gi|225192987|dbj|BAH29621.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193008|dbj|BAH29635.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 251
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 107 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLC-NMMLGYRGMGL 165
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 166 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 224
Query: 123 L 123
L
Sbjct: 225 L 225
>gi|13541494|ref|NP_111182.1| proteasome protease subunit beta [Thermoplasma volcanium GSS1]
gi|74575802|sp|Q97AZ7.1|PSB_THEVO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|14324878|dbj|BAB59804.1| proteasome beta subunit [Thermoplasma volcanium GSS1]
gi|239061209|emb|CAZ48528.1| 20S proteasome beta subunit [Thermoplasma volcanium GSS1]
Length = 211
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D++ + +G GD +++ + LY+ + + + A A L ++ PY
Sbjct: 45 IDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNML-NQVKYMPY 103
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
MV +L+ G D T P ++ ID + A+ G GS F +++ ++ +S++E VD
Sbjct: 104 MVQLLVGGID--TSPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYNEKLSIDEGVD 161
Query: 123 LVDKCILEIRSR 134
LV + I + R
Sbjct: 162 LVIRAISAAKQR 173
>gi|402225220|gb|EJU05281.1| proteasome-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 315
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + ++ L++ RN ++ AAA+ F L + +
Sbjct: 120 INPYLLGTMAGGAADCQYWETYLGIECRLHELRNRERISVAAASKFLS-NLVYSYKGMGL 178
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK TGP+L+Y+D T K D + G GS ++ ++D+ +H +S E+A +
Sbjct: 179 SMGTMICGWDK-TGPALFYVDSDGTRLKGDIFSVGSGSTYAYGVLDQGYHWDLSDEDAQE 237
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 238 LGRRSIYAAGHR 249
>gi|94966773|ref|NP_001035570.1| proteasome subunit beta type-8 [Bos taurus]
gi|74267608|gb|AAI02171.1| Proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Bos taurus]
Length = 276
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMCQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY++ T + + G G+ + +MD + +S+EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVNDSGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYD 226
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 227 LGRRAIVHATHR 238
>gi|315518887|dbj|BAJ51776.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L SG D + + K LY+ RN ++ AAA+ + R V +
Sbjct: 76 LGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLC-NMMLGYRGMGLSVGSM 134
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G+DKE GP +YY+D T + G G+ ++ ++D + M+VEEA +L +
Sbjct: 135 ICGWDKE-GPGVYYVDDNGTRLSGRMFSTGSGNSYAYGVLDSGYKEDMTVEEAYELGRRG 193
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
I R ++ +V+ +E W + KD
Sbjct: 194 IAHATHR-----DSYSGGVVNLYHIKEDGWIKVCKD 224
>gi|11514002|pdb|1G0U|K Chain K, A Gated Channel Into The Proteasome Core Particle
gi|11514016|pdb|1G0U|Y Chain Y, A Gated Channel Into The Proteasome Core Particle
gi|20150387|pdb|1JD2|K Chain K, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150394|pdb|1JD2|R Chain R, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|93279378|pdb|2F16|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279392|pdb|2F16|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032212|pdb|2FAK|K Chain K, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032226|pdb|2FAK|Y Chain Y, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490853|pdb|2GPL|K Chain K, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490867|pdb|2GPL|Y Chain Y, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|178847470|pdb|2ZCY|K Chain K, Yeast 20s Proteasome:syringolin A-Complex
gi|178847484|pdb|2ZCY|Y Chain Y, Yeast 20s Proteasome:syringolin A-Complex
gi|178847512|pdb|3BDM|K Chain K, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847526|pdb|3BDM|Y Chain Y, Yeast 20s Proteasome:glidobactin A-Complex
gi|190016377|pdb|3D29|K Chain K, Proteasome Inhibition By Fellutamide B
gi|190016391|pdb|3D29|Y Chain Y, Proteasome Inhibition By Fellutamide B
gi|197725331|pdb|3E47|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725345|pdb|3E47|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939222|pdb|3DY3|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939236|pdb|3DY3|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939250|pdb|3DY4|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939264|pdb|3DY4|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828247|pdb|3GPJ|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828261|pdb|3GPJ|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588331|pdb|3GPT|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588345|pdb|3GPT|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588359|pdb|3GPW|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588373|pdb|3GPW|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588553|pdb|3HYE|K Chain K, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588567|pdb|3HYE|Y Chain Y, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|330689391|pdb|3MG4|K Chain K, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689405|pdb|3MG4|Y Chain Y, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361154|pdb|3MG0|K Chain K, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361168|pdb|3MG0|Y Chain Y, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361182|pdb|3MG6|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361196|pdb|3MG6|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361210|pdb|3MG7|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361224|pdb|3MG7|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361238|pdb|3MG8|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361252|pdb|3MG8|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|335892351|pdb|3OKJ|K Chain K, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892365|pdb|3OKJ|Y Chain Y, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780429|pdb|3OEU|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780443|pdb|3OEU|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780457|pdb|3OEV|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780471|pdb|3OEV|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610682|pdb|3TDD|K Chain K, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610696|pdb|3TDD|Y Chain Y, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545856|pdb|3SHJ|K Chain K, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545870|pdb|3SHJ|Y Chain Y, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|374977460|pdb|1G65|K Chain K, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|374977461|pdb|1G65|Y Chain Y, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|378792251|pdb|3UN4|K Chain K, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792265|pdb|3UN4|Y Chain Y, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792285|pdb|3UN8|K Chain K, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792299|pdb|3UN8|Y Chain Y, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980826|pdb|3SDI|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980840|pdb|3SDI|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980854|pdb|3SDK|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980868|pdb|3SDK|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550742|pdb|4GK7|K Chain K, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550756|pdb|4GK7|Y Chain Y, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403072202|pdb|4G4S|L Chain L, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973870|pdb|4FZC|K Chain K, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973884|pdb|4FZC|Y Chain Y, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973898|pdb|4FZG|K Chain K, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973912|pdb|4FZG|Y Chain Y, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302349|pdb|4INR|K Chain K, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302363|pdb|4INR|Y Chain Y, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302377|pdb|4INT|K Chain K, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302391|pdb|4INT|Y Chain Y, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302405|pdb|4INU|K Chain K, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302419|pdb|4INU|Y Chain Y, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 212
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY ++ GP
Sbjct: 52 CQFWETWLGSQCRLHELREKERISVAAASKILS-NLVYQYKGAGLSMGTMICGYTRKEGP 110
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 111 TIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAY 170
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 171 SGGSVNLYHVTEDG 184
>gi|402866608|ref|XP_003897471.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Papio anubis]
Length = 252
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 10 AASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLA 69
A++G D + + K LY RNG ++ +AA+ + R + ++
Sbjct: 92 ASAGSYIDCQYWERLLAKECRLYYLRNGDRISVSAASKLLS-NMMCQYRGMGLSMGSMIC 150
Query: 70 GYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCIL 129
G+DK+ GP LYY+D T + + G G+ ++ +MD + +S EEA DL + I
Sbjct: 151 GWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIA 209
Query: 130 EIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVS 167
R ++ IV+ +E W + V+ T VS
Sbjct: 210 HATHR-----DSYSGGIVNMYHMKEDGWVK-VESTDVS 241
>gi|255713154|ref|XP_002552859.1| KLTH0D03058p [Lachancea thermotolerans]
gi|238934239|emb|CAR22421.1| KLTH0D03058p [Lachancea thermotolerans CBS 6340]
Length = 287
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ + ++ AAA+ L + + + ++ GY K+ GP
Sbjct: 127 CQFWETWLGTQCRLHELKEKERISVAAASKILS-NLVYQYKGAGLSMGTMVCGYTKKEGP 185
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSR 134
++YY+D T K D G G F+ ++D ++ +SVEEA+ L + IL R
Sbjct: 186 TIYYVDSDGTRLKGDMFCVGSGQTFAYGVLDSNYKWDLSVEEALYLGKRSILAATHR 242
>gi|344253005|gb|EGW09109.1| Proteasome subunit beta type-8 [Cricetulus griseus]
Length = 228
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 62 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMLQYRGMGL 120
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + G G+ ++ +MD + +S EEA D
Sbjct: 121 SMGSMVCGWDKK-GPGLYYVDENGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYD 179
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 180 LGRRAIVHATHR 191
>gi|225703280|gb|ACO07486.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 16/159 (10%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RKSPYMV 64
+I SG GD + TE I + +Y+ N +T+ A A L+T L R PY V
Sbjct: 75 VIGCSGFHGDCLTLTEIIDARLKMYKHSNNKCMTSGAIAAM----LSTILYGRRFFPYYV 130
Query: 65 NILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF---------HSGM 115
++ G D+E ++Y D + + + A G S ++D H +
Sbjct: 131 YNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPL 190
Query: 116 SVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
S E+AV LV + R V I IV KDG +E
Sbjct: 191 SQEKAVQLVKDVFISAAERDVYTGDALRICIVTKDGIKE 229
>gi|225193038|dbj|BAH29655.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 226 LGCRGIAHATHR 237
>gi|225193014|dbj|BAH29639.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 226 LGCRGIAHATHR 237
>gi|225192993|dbj|BAH29625.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 226 LGCRGIAHATHR 237
>gi|225192955|dbj|BAH29697.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 226 LGCRGIAHATHR 237
>gi|114326385|ref|NP_001041550.1| proteasome subunit beta type-8 precursor [Canis lupus familiaris]
gi|62900679|sp|Q5W416.1|PSB8_CANFA RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Proteasome subunit beta-5i; Flags: Precursor
gi|55162804|emb|CAH63452.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Canis lupus familiaris]
Length = 276
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L SG D + + K LY RNG ++ +AA+ + R + +
Sbjct: 114 LGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMVYQYRGMDLSMGSM 172
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G+DK+ GP LYY+D T + + G GS ++ +MD + +S EEA +L +
Sbjct: 173 ICGWDKK-GPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRA 231
Query: 128 I 128
I
Sbjct: 232 I 232
>gi|340914624|gb|EGS17965.1| hypothetical protein CTHT_0059780 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 283
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++S L +G D + ++ L++ R+ ++ AAA+ L +
Sbjct: 106 INSELLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKIL-ANLVYQYKGMGL 164
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ + AG KE GP+LYYID T + G G F+ ++D + ++ EEA+D
Sbjct: 165 SMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTTEEALD 224
Query: 123 LVDKCILEIRSR 134
L + IL R
Sbjct: 225 LASRSILAATHR 236
>gi|225193041|dbj|BAH29657.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 226 LGCRGIAHATHR 237
>gi|219567054|dbj|BAH05045.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 243
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 76 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLS-NMMLGYRGMGL 134
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 135 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYE 193
Query: 123 L 123
L
Sbjct: 194 L 194
>gi|119872605|ref|YP_930612.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595721|sp|A1RTI7.1|PSB2_PYRIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119674013|gb|ABL88269.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum islandicum
DSM 4184]
Length = 200
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D H SG D F+ Y+ P+ A N+ L + R Y
Sbjct: 38 IDDHVAATMSGGVADLQSLLSFLTLRAREYKIEYKRPIPIRALVNYVSLILFYS-RPYIY 96
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+V+ ++ G D+E G LY +D++ T+ + A G GS ++ ++ + MS+E+AVD
Sbjct: 97 LVHSIIGGVDREEGAVLYMVDWLGTVTRERYIATGSGSPYAKGALEVGYREDMSLEDAVD 156
Query: 123 LVDKCI 128
L + +
Sbjct: 157 LAIRSV 162
>gi|315518881|dbj|BAJ51773.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
Length = 272
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 105 INPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLS-NMMLGYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 164 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 222
Query: 123 L 123
L
Sbjct: 223 L 223
>gi|225193068|dbj|BAH29675.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 226 LGCRGIAHATHR 237
>gi|225192958|dbj|BAH29695.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 106 INPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 164
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP +YY+D + G GS ++ ++D + M+VEEA +
Sbjct: 165 SVGSMICGWDKE-GPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYE 223
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 224 LGRRGIVHATHR 235
>gi|449681407|ref|XP_002162379.2| PREDICTED: proteasome subunit beta type-5-like [Hydra
magnipapillata]
Length = 277
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + K LYQ RN ++ AAA+ + +
Sbjct: 109 INPYLLGTMAGGAADCAFWQRVLAKECRLYQLRNKERISVAAASKLL-ANMVYQYKGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK GP LYY+D + K D + G GS ++ ++D +++EEA D
Sbjct: 168 SMGTMICGWDKR-GPGLYYVDSDGSRLKGDLFSVGSGSTYAYGVLDADHKWDLTLEEAYD 226
Query: 123 LVDKCILEIRSR 134
L ++ I R
Sbjct: 227 LGNRAIYHATHR 238
>gi|225192949|dbj|BAH29699.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLC-NMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 226 LGCRGIAHATHR 237
>gi|315518872|dbj|BAJ51767.1| proteasome subunit, beta type 8 [Oryzias matanensis]
Length = 272
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 105 INPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLS-NMMLGYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 164 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 222
Query: 123 L 123
L
Sbjct: 223 L 223
>gi|225192969|dbj|BAH29689.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192972|dbj|BAH29687.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192975|dbj|BAH29685.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192996|dbj|BAH29627.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193026|dbj|BAH29647.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193035|dbj|BAH29653.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193044|dbj|BAH29659.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193047|dbj|BAH29661.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193062|dbj|BAH29671.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLC-NMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 226 LGCRGIAHATHR 237
>gi|407844517|gb|EKG01987.1| proteasome beta-1 subunit, putative [Trypanosoma cruzi]
Length = 284
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 14/129 (10%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYM------VN 65
SG D E + Y+ P+ AAN +K YM
Sbjct: 100 SGSAADTQALAEQTANYLESYEIDTSKPVNVTTAANI--------FKKLCYMNKWNISAG 151
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I++AGYD G S+Y I + K+D A G GS F S D ++ +GMS EE V
Sbjct: 152 IIVAGYDPLNGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKTGMSKEECVCFCQ 211
Query: 126 KCILEIRSR 134
+ + SR
Sbjct: 212 RAVAHAYSR 220
>gi|301757125|ref|XP_002914391.1| PREDICTED: proteasome subunit beta type-8-like [Ailuropoda
melanoleuca]
gi|281338481|gb|EFB14065.1| hypothetical protein PANDA_002294 [Ailuropoda melanoleuca]
Length = 276
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMVFQYRGMDL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T D + G G+ ++ +MD + +S EEA +
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDADGTRLSGDMFSTGSGNTYAYGVMDSGYRPDLSPEEAYE 226
Query: 123 LVDKCIL 129
L + I+
Sbjct: 227 LGRRAIV 233
>gi|389851755|ref|YP_006353989.1| proteasome subunit beta [Pyrococcus sp. ST04]
gi|388249061|gb|AFK21914.1| proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 197
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
I +G GD ++ Y F G P++T A AN L+ L + PY+V
Sbjct: 49 ITTAGSVGDVQVLARILEAEARYYYFTWGRPMSTKAMANL----LSNILNEHKWFPYLVQ 104
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I++ GY E P++ +D L D A G G+ F++++++ + + +E+A +L
Sbjct: 105 IIIGGYVDE--PTIANLDPFGGLIFDDYTATGSGTPFAIAVLEEGYRKNLGIEKAKELAI 162
Query: 126 KCILEIRSRLVVAPPNFV-IKIVDKDGARE 154
K + R V V + + K+G +E
Sbjct: 163 KAVRAAGKRDVYTGSKKVQVVTITKEGMKE 192
>gi|225193023|dbj|BAH29645.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193032|dbj|BAH29651.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193074|dbj|BAH29679.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SVGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 225
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 226 LGCRGIAHATHR 237
>gi|340056627|emb|CCC50963.1| proteasome alpha 5 subunit, putatitive [Trypanosoma vivax Y486]
Length = 246
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 27/173 (15%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAA--------NFTRGELA 54
+D H + SG D E + ++F P++ + A F G
Sbjct: 70 VDHHIGVVLSGMVADARILVEHARVEAQNHRFTYDEPMSVESCALAACDLSIQFGEGGGR 129
Query: 55 TALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSG 114
L P+ V++L+AG DK GP L+ D T + D A G G+ + ++ +H
Sbjct: 130 KKLMSRPFGVSLLIAGVDK-NGPQLWQTDPSGTYTRYDAQAIGAGAEAAQTVFGELYHRN 188
Query: 115 MSVEEAVDLVDKCILEI------------------RSRLVVAPPNFVIKIVDK 149
MS+EEA +LV + ++ +L V PP+ + I+D+
Sbjct: 189 MSIEEAENLVVHILKQVMEEELTRNNVEIAVITASTGKLDVYPPSRIQGIIDR 241
>gi|219567048|dbj|BAH05042.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 71 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLS-NMMLGYRGMGL 129
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 130 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYE 188
Query: 123 L 123
L
Sbjct: 189 L 189
>gi|225192961|dbj|BAH29693.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192990|dbj|BAH29623.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193005|dbj|BAH29633.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193020|dbj|BAH29643.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193071|dbj|BAH29677.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 106 INPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 164
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP +YY+D + G GS ++ ++D + M+VEEA +
Sbjct: 165 SVGSMICGWDKE-GPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYE 223
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 224 LGRRGIVHATHR 235
>gi|219567052|dbj|BAH05044.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 71 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLS-NMMLGYRGMGL 129
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 130 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYE 188
Query: 123 L 123
L
Sbjct: 189 L 189
>gi|354488029|ref|XP_003506173.1| PREDICTED: proteasome subunit beta type-5-like [Cricetulus griseus]
gi|344242609|gb|EGV98712.1| Proteasome subunit beta type-5 [Cricetulus griseus]
Length = 263
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ AF G GS ++ +MDR + + V+EA
Sbjct: 155 SMGTMICGWDKR-GPGLYYVD--SEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLEVQEA 211
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DL + I + R + + + V +DG
Sbjct: 212 YDLARRAIYQATYRDAYSGGSVNLYHVREDG 242
>gi|219567046|dbj|BAH05041.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 71 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLS-NMMLGYRGMGL 129
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 130 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYE 188
Query: 123 L 123
L
Sbjct: 189 L 189
>gi|225192934|dbj|BAH29709.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192940|dbj|BAH29705.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 106 INPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLL-CNMMLGYRGMGL 164
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++ G+DKE GP +YY+D + G GS ++ ++D + M+VEEA +
Sbjct: 165 SVGSMICGWDKE-GPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYE 223
Query: 123 LVDKCILEIRSR 134
L + I+ R
Sbjct: 224 LGRRGIVHATHR 235
>gi|229582084|ref|YP_002840483.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|302595759|sp|C3NHF1.1|PSB2_SULIN RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|228012800|gb|ACP48561.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
Length = 211
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGI---PLTTAAAANFTR-GELATALRKSPYMV 64
I +G D +QF + KN+ Y + N P++ A TR + +A + PY+V
Sbjct: 60 ITTAGSVAD-LQFIYDVLKNI--YHYNNITKYGPISIKGIA--TRLANVLSATKYFPYIV 114
Query: 65 NILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
IL+ GYD + P L+ +DY+ + + + A G GS ++ +++ ++ M+++EA DL
Sbjct: 115 QILIGGYDDQ--PRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLA 172
Query: 125 DKCILEIRSR 134
+ + R
Sbjct: 173 KRAVFSAIKR 182
>gi|21465653|pdb|1IRU|L Chain L, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465667|pdb|1IRU|Z Chain Z, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 204
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ LA + +
Sbjct: 37 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKL----LANMVYQYKG 92
Query: 63 M---VNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSV 117
M + ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + V
Sbjct: 93 MGLSMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEV 149
Query: 118 EEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
E+A DL + I + R + + V +DG
Sbjct: 150 EQAYDLARRAIYQATYRDAYSGGAVNLYHVREDG 183
>gi|440473524|gb|ELQ42315.1| proteasome component PRE3 [Magnaporthe oryzae Y34]
gi|440489744|gb|ELQ69371.1| proteasome component PRE3 [Magnaporthe oryzae P131]
Length = 211
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + L+ NG P TT AA + E+ + K +++AG+
Sbjct: 58 SGSAADTQAVADIVQYQLGLFHMTNGKPPTTQTAAAIFQ-EICYS-NKDRLSAGLIIAGW 115
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM +AV V + E
Sbjct: 116 DERHGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWREGMEEADAVQFVKGALAE 174
>gi|172260|gb|AAA34906.1| proteosome-related protein [Saccharomyces cerevisiae]
Length = 288
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY ++ GP
Sbjct: 127 CQFWETWLGSQCRLHELREKERISVAAASKILS-NLVYQYKGAGLSMGTMICGYTRKEGP 185
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 186 TIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAY 245
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 246 SGGSVNLYHVTEDG 259
>gi|219567036|dbj|BAH05036.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 71 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLS-NMMLGYRGMGL 129
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 130 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYE 188
Query: 123 L 123
L
Sbjct: 189 L 189
>gi|367045906|ref|XP_003653333.1| hypothetical protein THITE_2150567 [Thielavia terrestris NRRL 8126]
gi|347000595|gb|AEO66997.1| hypothetical protein THITE_2150567 [Thielavia terrestris NRRL 8126]
Length = 245
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAAAANFTR--GELA-- 54
+D H A SG D E + + F PL T A + GE A
Sbjct: 70 IDRHIGCAMSGLQADARSMVEHARIECQSHAFNYNEPLRVESCTQAICDLALRFGESADG 129
Query: 55 -TALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + + +H
Sbjct: 130 EESVMSRPFGVALLIAGYD-EDGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHK 188
Query: 114 GMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+++ +A LV K + ++ + A + + + G R Y E
Sbjct: 189 SLTIADAETLVLKTLKQVMEEKLDAKNVQLASVTKERGFRIYTDEE 234
>gi|315518863|dbj|BAJ51761.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 272
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 105 INPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLS-NMMLGYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 164 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 222
Query: 123 L 123
L
Sbjct: 223 L 223
>gi|315518860|dbj|BAJ51759.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 275
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLS-NMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTVEEAYE 225
Query: 123 L 123
L
Sbjct: 226 L 226
>gi|260947704|ref|XP_002618149.1| proteasome component PRE2 precursor [Clavispora lusitaniae ATCC
42720]
gi|238848021|gb|EEQ37485.1| proteasome component PRE2 precursor [Clavispora lusitaniae ATCC
42720]
Length = 282
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D + ++ L++ R ++ AAA+ G L + + ++ GY
Sbjct: 116 AGGAADCQYWETWLGTQCRLHELREKERISVAAASKIL-GNLVYNYKGMGLSMGTMVCGY 174
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEI 131
K+ GP++YY+D T K D G G F+ ++D + +SVE+A+ L + IL
Sbjct: 175 TKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAYGVLDSEYKWDLSVEDALYLGKRSILAA 234
Query: 132 RSR 134
R
Sbjct: 235 THR 237
>gi|219567018|dbj|BAH05027.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 275
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLS-NMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTVEEAYE 225
Query: 123 L 123
L
Sbjct: 226 L 226
>gi|220881|dbj|BAA01572.1| proteasome subunit RC1 [Rattus sp.]
Length = 208
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 41 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMLQYRGMGL 99
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + G G+ ++ +MD + +S EEA D
Sbjct: 100 SMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYD 158
Query: 123 LVDKCIL 129
L + I+
Sbjct: 159 LARRAIV 165
>gi|71001590|ref|XP_755476.1| proteasome component Pup2 [Aspergillus fumigatus Af293]
gi|66853114|gb|EAL93438.1| proteasome component Pup2, putative [Aspergillus fumigatus Af293]
gi|159129544|gb|EDP54658.1| proteasome component Pup2, putative [Aspergillus fumigatus A1163]
Length = 250
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAAAANFT-----RGEL 53
+D H A SG D E + + F PL TT A + G+
Sbjct: 74 IDQHIGCAMSGLQADARSLIEHARVECQNHAFHYAEPLRVESTTQAICDLALRFGETGDD 133
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GP LY+ + T ++ D A G GS + + + +H
Sbjct: 134 DESVMSRPFGVALLIAGYD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHR 192
Query: 114 GMSVEEAVDLVDKCILEI 131
+++ EA LV K + ++
Sbjct: 193 SLTLPEAETLVLKTLKQV 210
>gi|558526|dbj|BAA06097.1| proteasome subunit X [Homo sapiens]
gi|30582393|gb|AAP35423.1| proteasome (prosome, macropain) subunit, beta type, 5 [Homo
sapiens]
Length = 208
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ LA + +
Sbjct: 41 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKL----LANMVYQYKG 96
Query: 63 M---VNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSV 117
M + ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + V
Sbjct: 97 MGLSMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEV 153
Query: 118 EEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
E+A DL + I + R + + V +DG
Sbjct: 154 EQAYDLARRAIYQATYRDAYSGGAVNLYHVREDG 187
>gi|255988227|gb|ACU51028.1| 20S proteasome beta5 subunit [Conocephalum conicum]
Length = 280
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 23 EFIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPS 78
+F Q+N+ L++ N ++ A+ L + R + ++AG+D ETGP
Sbjct: 113 QFWQRNLGTRCRLHELGNKRRISVTGASKLLANTLYS-YRGMGLSMGTMIAGWD-ETGPG 170
Query: 79 LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
LYY+D K + + G GS ++ ++D F M+VEEAV+L + I
Sbjct: 171 LYYVDSEGGRVKGRRFSVGSGSTYAYGVLDTGFRWDMTVEEAVELARRSI 220
>gi|219567050|dbj|BAH05043.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 71 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLS-NMMLGYRGMGL 129
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 130 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYE 188
Query: 123 L 123
L
Sbjct: 189 L 189
>gi|219567030|dbj|BAH05033.1| proteasome subunit, beta type 8 [Oryzias dancena]
Length = 275
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLS-NMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTVEEAYE 225
Query: 123 L 123
L
Sbjct: 226 L 226
>gi|224071019|ref|XP_002303332.1| predicted protein [Populus trichocarpa]
gi|118485571|gb|ABK94637.1| unknown [Populus trichocarpa]
gi|222840764|gb|EEE78311.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 1 MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
M +D A SG D E + ++F G P+T + A F G+
Sbjct: 68 MEIDECIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 53 LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
+ R P+ V++L+AG+D E GPSLYY D T + + A G GS + S + ++
Sbjct: 128 EESMSR--PFGVSLLIAGHD-EKGPSLYYTDPSGTFWQCNAKAIGSGSEGADSTLQEQYN 184
Query: 113 SGMSVEEA 120
++++EA
Sbjct: 185 KDLTLKEA 192
>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
gi|121724010|sp|Q2FQL8.1|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanospirillum hungatei
JF-1]
Length = 209
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 3/158 (1%)
Query: 9 IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
+ +G GD Q + +LY+ R G ++ AA+ + R P+ V +L+
Sbjct: 53 LTTAGGVGDAQQLARLMTVEANLYEIRRGKRISVQAASTLLS-NILHGNRMFPFYVQLLI 111
Query: 69 AGYDKETGPSLYYIDYIATLHKVDK-AAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
G D ETGP L+ +D + K D A G GS + +++ + GM A++L +
Sbjct: 112 GGVD-ETGPVLFSVDAVGGTGKEDGIVATGSGSPMAYGVLEDRYTLGMDERSAIELAIRA 170
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTP 165
+ R + + ++ +D E + E TP
Sbjct: 171 LRSAIKRDAGSGEGVAVVVITEDSYHELSDEEISVLTP 208
>gi|71666388|ref|XP_820153.1| proteasome beta-1 subunit [Trypanosoma cruzi strain CL Brener]
gi|70885487|gb|EAN98302.1| proteasome beta-1 subunit, putative [Trypanosoma cruzi]
Length = 284
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 14/129 (10%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYM------VN 65
SG D E + Y+ P+ AAN +K YM
Sbjct: 100 SGSAADTQALAEQTANYLESYEIDTSKPVNVTTAANI--------FKKLCYMNKWNISAG 151
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
I++AGYD G S+Y I + K+D A G GS F S D ++ +GMS EE V
Sbjct: 152 IIVAGYDPLNGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKTGMSKEECVCFCQ 211
Query: 126 KCILEIRSR 134
+ + SR
Sbjct: 212 RAVAHAYSR 220
>gi|403071958|pdb|4B4T|5 Chain 5, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
Length = 287
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY ++ GP
Sbjct: 127 CQFWETWLGSQCRLHELREKERISVAAASKILS-NLVYQYKGAGLSMGTMICGYTRKEGP 185
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 186 TIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAY 245
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 246 SGGSVNLYHVTEDG 259
>gi|242796933|ref|XP_002482907.1| proteasome component Pre3, putative [Talaromyces stipitatus ATCC
10500]
gi|218719495|gb|EED18915.1| proteasome component Pre3, putative [Talaromyces stipitatus ATCC
10500]
Length = 231
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + + ++++Y N P +T AA + EL K I++AGY
Sbjct: 75 SGSAADTQAVADIVSYHLNMYGIVNNEPPSTQTAAALFQ-ELCYD-NKDQLSAGIIIAGY 132
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM+ EE V+ V + E
Sbjct: 133 DRRHGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWKEGMTEEEGVNFVKSALSE 191
>gi|6325360|ref|NP_015428.1| proteasome core particle subunit beta 5 [Saccharomyces cerevisiae
S288c]
gi|730375|sp|P30656.3|PSB5_YEAST RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain subunit PRE2; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE2;
AltName: Full=Proteasome component PRE2; AltName:
Full=Proteinase YSCE subunit PRE2; Flags: Precursor
gi|323462946|pdb|3NZJ|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462960|pdb|3NZJ|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462974|pdb|3NZW|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462988|pdb|3NZW|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463002|pdb|3NZX|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463016|pdb|3NZX|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|4221|emb|CAA48628.1| proteasome Pre2 subunit [Saccharomyces cerevisiae]
gi|914974|gb|AAB68073.1| Pre2p: Proteasome subunit [Saccharomyces cerevisiae]
gi|1041975|gb|AAB34630.1| Doa3, PRG1, PRE2=beta-type proteasome subunit LMP7 homolog/Hs-X
homolog [Saccharomyces cerevisiae, Peptide, 287 aa]
gi|151942879|gb|EDN61225.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|190408030|gb|EDV11295.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
gi|256269062|gb|EEU04399.1| Pre2p [Saccharomyces cerevisiae JAY291]
gi|285815625|tpg|DAA11517.1| TPA: proteasome core particle subunit beta 5 [Saccharomyces
cerevisiae S288c]
gi|323331341|gb|EGA72759.1| Pre2p [Saccharomyces cerevisiae AWRI796]
gi|323335173|gb|EGA76463.1| Pre2p [Saccharomyces cerevisiae Vin13]
gi|323350231|gb|EGA84378.1| Pre2p [Saccharomyces cerevisiae VL3]
gi|349581905|dbj|GAA27062.1| K7_Pre2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296106|gb|EIW07209.1| Pre2p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|742352|prf||2009376C proteasome:SUBUNIT=Pre2
Length = 287
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY ++ GP
Sbjct: 127 CQFWETWLGSQCRLHELREKERISVAAASKILS-NLVYQYKGAGLSMGTMICGYTRKEGP 185
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 186 TIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAY 245
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 246 SGGSVNLYHVTEDG 259
>gi|259150253|emb|CAY87056.1| Pre2p [Saccharomyces cerevisiae EC1118]
gi|365762571|gb|EHN04105.1| Pre2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 287
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY ++ GP
Sbjct: 127 CQFWETWLGSQCRLHELREKERISVAAASKILS-NLVYQYKGAGLSMGTMICGYTRKEGP 185
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 186 TIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAY 245
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 246 SGGSVNLYHVTEDG 259
>gi|224473800|gb|ACN49144.1| proteasome beta 8 subunit proprotein [Oryzias dancena]
Length = 275
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 108 INPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLS-NMMLGYRGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 167 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTVEEAYE 225
Query: 123 L 123
L
Sbjct: 226 L 226
>gi|299116096|emb|CBN74512.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 286
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 24 FIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSL 79
F ++N+ +Y+ RN ++ AAA+ + + R + ++AG+DK TGP L
Sbjct: 122 FWERNLGIQCRMYELRNKERISVAAASKLLSNTM-SQYRGYGLSMGTMVAGWDK-TGPQL 179
Query: 80 YYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSR 134
YY D T + + G GS ++ ++D H+ M+ EEA++L + I R
Sbjct: 180 YYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHR 234
>gi|390601185|gb|EIN10579.1| proteasome-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 240
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 59/152 (38%), Gaps = 3/152 (1%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP 61
+D SG D + + + +Y G P AAA F R K
Sbjct: 54 CVDERIYCCRSGSAADTQAVADIVHYYLQMYTQSMGPPSVHTAAALFQR---LCYENKDA 110
Query: 62 YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
I++AG+D+E GPS+Y I L + A G GS + D F G ++ V
Sbjct: 111 LSAGIIVAGWDEEVGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATFQEGWGKDQTV 170
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
D V + +R + + ++ KDGA
Sbjct: 171 DFVKNTLSLAMARDGSSGGVIRMCVITKDGAE 202
>gi|335292522|ref|XP_001924480.2| PREDICTED: proteasome subunit beta type-5 [Sus scrofa]
Length = 275
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 108 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + VE+A
Sbjct: 167 SMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQA 223
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DL + I + R + + + V +DG
Sbjct: 224 YDLARRAIYQATYRDAYSGGSVNLYHVREDG 254
>gi|426376393|ref|XP_004054985.1| PREDICTED: proteasome subunit beta type-5 isoform 6 [Gorilla
gorilla gorilla]
Length = 275
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 108 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 166
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + VE+A
Sbjct: 167 SMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQA 223
Query: 121 VDLVDKCILEIRSR 134
DL + I + R
Sbjct: 224 YDLARRAIYQATYR 237
>gi|30584671|gb|AAP36588.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 5
[synthetic construct]
Length = 209
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ LA + +
Sbjct: 41 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKL----LANMVYQYKG 96
Query: 63 M---VNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSV 117
M + ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + V
Sbjct: 97 MGLSMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEV 153
Query: 118 EEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
E+A DL + I + R + + V +DG
Sbjct: 154 EQAYDLARRAIYQATYRDAYSGGAVNLYHVREDG 187
>gi|409045696|gb|EKM55176.1| hypothetical protein PHACADRAFT_255622 [Phanerochaete carnosa
HHB-10118-sp]
Length = 300
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + ++ L++ RN ++ AAA+ + L + +
Sbjct: 114 INPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKYLS-NLVYSYKGMGL 172
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK TGP++YY+D T K D + G GS F+ ++D+ + ++ EEA +
Sbjct: 173 SMGTMICGWDK-TGPAVYYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDEEAQE 231
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
L + I R + + V +DG
Sbjct: 232 LGRRSIYAAGHRDAFSGNTINLYHVQEDG 260
>gi|389622405|ref|XP_003708856.1| proteasome component PRE3 [Magnaporthe oryzae 70-15]
gi|351648385|gb|EHA56244.1| proteasome component PRE3 [Magnaporthe oryzae 70-15]
Length = 228
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + L+ NG P TT AA + E+ + K +++AG+
Sbjct: 75 SGSAADTQAVADIVQYQLGLFHMTNGKPPTTQTAAAIFQ-EICYS-NKDRLSAGLIIAGW 132
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM +AV V + E
Sbjct: 133 DERHGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWREGMEEADAVQFVKGALAE 191
>gi|207340308|gb|EDZ68701.1| YPR103Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 287
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY ++ GP
Sbjct: 127 CQFWETWLGSQCRLHELREKERISVAAASKILS-NLVYQYKGAGLSMGTMICGYTRKEGP 185
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 186 TIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAY 245
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 246 SGGSVNLYHVTEDG 259
>gi|395859279|ref|XP_003801967.1| PREDICTED: proteasome subunit beta type-5 [Otolemur garnettii]
Length = 263
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + VE+A
Sbjct: 155 SMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYHLEVEQA 211
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
DL + I + R + + + V +DG
Sbjct: 212 YDLARRAIYQATYRDAYSGGSVNLYHVREDG 242
>gi|328768571|gb|EGF78617.1| hypothetical protein BATDEDRAFT_30413 [Batrachochytrium
dendrobatidis JAM81]
Length = 243
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 56 ALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGM 115
AL P+ + +L+ G D E GP L++ D TL + D A G GS + + + FH +
Sbjct: 132 ALMSRPFGIALLIGGVD-EKGPQLFHADPSGTLTQYDAKAIGSGSEGAQTELQEQFHKSL 190
Query: 116 SVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++ EAV L K + ++ + A V + ++G
Sbjct: 191 TLAEAVSLSLKVLKQVMEEKISASNVQVATVTAQNG 226
>gi|395839143|ref|XP_003792460.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1
[Otolemur garnettii]
Length = 343
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATAL---RK 59
L +I SG GD + T+ I+ + +Y+ N +TT A A L+T L R
Sbjct: 176 LTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAM----LSTILYSRRF 231
Query: 60 SPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF-------- 111
PY V ++ G D+E ++Y D + + + A G S ++D
Sbjct: 232 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNV 291
Query: 112 -HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
H +S++ A+ LV + R V I IV +DG RE
Sbjct: 292 EHVPLSLDRAMRLVKDVFISAAERDVYTGDALKICIVTRDGTRE 335
>gi|323346321|gb|EGA80611.1| Pre2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 287
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY ++ GP
Sbjct: 127 CQFWETWLGSQCRLHELREKERISVAAASKILX-NLVYQYKGAGLSMGTMICGYTRKEGP 185
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 186 TIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAY 245
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 246 SGGSVNLYHVTEDG 259
>gi|323302586|gb|EGA56393.1| Pre2p [Saccharomyces cerevisiae FostersB]
Length = 287
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 19 VQFTE-FIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
QF E ++ L++ R ++ AAA+ L + + + ++ GY ++ GP
Sbjct: 127 CQFWETWLGSQCRLHELREKERISVAAASKILS-NLVYQYKGAGLSMGTMICGYTRKEGP 185
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
++YY+D T K D G G F+ ++D ++ +SVE+A+ L + IL R
Sbjct: 186 TIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAY 245
Query: 138 APPNFVIKIVDKDG 151
+ + + V +DG
Sbjct: 246 SGGSVNLYHVTEDG 259
>gi|18124203|gb|AAL59862.1|AF363583_1 proteasome beta-subunit LMP7 [Heterodontus francisci]
Length = 276
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN +T +AA+ + R
Sbjct: 105 INPYLLGTMSGSAADCQYWERLLAKQCRLYKLRNKQRITVSAASKLL-CNMMCEYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ ++D + ++VEEA D
Sbjct: 164 SMGSMICGWDKK-GPGLYYVDDNGTRLSGNMFSTGCGNAYAYGVVDSGYRYDLTVEEAYD 222
Query: 123 LVDKCILEIRSR 134
L + I R
Sbjct: 223 LGRRAIYHATHR 234
>gi|118575464|ref|YP_875207.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
gi|302595701|sp|A0RU86.1|PSB1_CENSY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|118193985|gb|ABK76903.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
Length = 193
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 61 PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
P + +++ G E P++Y +D + ++ + AA G G+ +L ++D F SGMS ++A
Sbjct: 97 PLLTQVIVGGVVGE--PAIYTLDSLGSVLPDEYAAVGTGAEMALGVLDPQFKSGMSEKDA 154
Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYA 156
VDL + I R + I +D +GARE A
Sbjct: 155 VDLAVRGIRSAALRDSFSGDGLDILALDANGAREIA 190
>gi|389748770|gb|EIM89947.1| N-terminal nucleophile aminohydrolase [Stereum hirsutum FP-91666
SS1]
Length = 312
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + ++ L++ RN ++ AAA+ + L + +
Sbjct: 119 INPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKYLS-NLVYSYKGMGL 177
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++AG+DK TGP+L+Y+D T K D + G GS F+ ++D+ + ++ EEA +
Sbjct: 178 SMGTMIAGWDK-TGPALFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDEEAQE 236
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
L + I R + + V +DG
Sbjct: 237 LGRRSIYAAGHRDAFSGNTNNLYHVKEDG 265
>gi|302902756|ref|XP_003048711.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729645|gb|EEU42998.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + +Q + L+ NG P T AA+ + E+ + K +++AG+
Sbjct: 58 SGSAADTQAVADIVQYQLGLFAMMNGKPPMTQTAASIFQ-EICYS-NKDRLSAGLIIAGW 115
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILE 130
D+ G +Y I +LHK A G GS + D ++ GM ++AV+ V + E
Sbjct: 116 DERFGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMEKDDAVNFVKGALRE 174
>gi|384245501|gb|EIE18995.1| 20S proteasome beta subunit E, type beta 5 [Coccomyxa
subellipsoidea C-169]
Length = 276
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 22 TEFIQKNVS----LYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGP 77
+F Q+N+ LY+ NG ++ AA+ + + + + ++AGYD TGP
Sbjct: 111 CQFWQRNLGQQCRLYELNNGKRISVRAASKLL-ANVMFSYKGYGLSMGTMVAGYDP-TGP 168
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVV 137
LYY+D K + G GS ++ ++D + M VE+A++L + I R V
Sbjct: 169 GLYYVDSDGQRTKGQIFSVGSGSLYAYGVLDNGYKWDMDVEDAIELGRRSIYHATFRDAV 228
Query: 138 APPNFVIKIVDKDGARE 154
+ + V DG ++
Sbjct: 229 SGGTVSVYHVTADGWKK 245
>gi|225192943|dbj|BAH29703.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 105 INPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLL-CNMMLGYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 164 SMGSMICGWDKE-GPGLYYVDNNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 222
Query: 123 L 123
L
Sbjct: 223 L 223
>gi|425781146|gb|EKV19128.1| Proteasome component Pup2, putative [Penicillium digitatum PHI26]
gi|425783177|gb|EKV21037.1| Proteasome component Pup2, putative [Penicillium digitatum Pd1]
Length = 246
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 10/166 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPL----TTAAAANFT-----RGEL 53
+D H A SG D E + + F PL TT A + G+
Sbjct: 70 IDQHIGCAMSGLQADARNLVEHARVECQNHAFHYAEPLRVESTTQAICDLALRFGESGDD 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GP LY+ + T ++ D A G GS + + + +H
Sbjct: 130 EESVMSRPFGVALLIAGYD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHK 188
Query: 114 GMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
+++ EA LV K + ++ + + + + + G R Y E
Sbjct: 189 SLTLVEAEMLVLKTLKQVMEEKLDSKNVQLASVTKEKGFRIYNDEE 234
>gi|327311727|ref|YP_004338624.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326948206|gb|AEA13312.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 204
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 2 VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAAN------FTRGELAT 55
V++ +A++G D + ++ N +Y+ + + AA A F R
Sbjct: 44 VVNDRMALASAGVIADMQTIAKILRVNAKMYELESRRKPSIAAMAKLLSVIMFNR----- 98
Query: 56 ALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGM 115
R P++ +L+ GYD+E GP ++ +D + +L + D AA G G+ ++S++D ++ +
Sbjct: 99 --RIMPFIAEVLVGGYDEE-GPHIFVLDPVGSLIEDDYAALGTGAKMAISILDANYSKDV 155
Query: 116 SVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
V A L I R V+ + V DG E
Sbjct: 156 DVSGARKLAINAIRAALERDPVSGGGIDLVTVTADGVSE 194
>gi|2851557|sp|P34065.2|PSB5_CHICK RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain chain 1; AltName: Full=Multicatalytic
endopeptidase complex chain 1; AltName: Full=Proteasome
chain 1; AltName: Full=Proteasome subunit C1; Flags:
Precursor
gi|1906303|dbj|BAA19471.1| proteasome C1 subunit [Gallus gallus]
Length = 256
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 21 FTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYM---VNILLAGYDKETGP 77
+ + + +Y+ RN P++ AAA+ LA + + M + ++ G+DK GP
Sbjct: 110 WERLLARQCRVYELRNKEPISVAAASKL----LANMVYQYKGMGLSMGTMICGWDKR-GP 164
Query: 78 SLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSR 134
LYY+D T + A G GS ++ ++D M+ +EA++L + I + R
Sbjct: 165 GLYYVDSEGTRIPGEAFAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARR 221
>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 219
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 2/158 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D + + +G GD + LY+ R G + A A L ++ R P+
Sbjct: 38 IDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSS-RMFPF 96
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDK-AAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
+ I++ GYD G L+ +D + +++ A G GS + +++ + MSVEE +
Sbjct: 97 LTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGI 156
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
L + R + + ++ KDG + + E
Sbjct: 157 KLALNALKSAMERDTFSGNGISLAVITKDGVKIFEDEE 194
>gi|219117045|ref|XP_002179317.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409208|gb|EEC49140.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 63
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 77 PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLV 136
P LY++D +L V A G+G+ F LS++D+ + + ++A DL+ +C ++R+R V
Sbjct: 1 PRLYWLDEYGSLQTVPYGAHGHGANFILSILDQGYRPDLDRQQAADLLRRCFAQLRTRYV 60
Query: 137 V 137
+
Sbjct: 61 I 61
>gi|225679898|gb|EEH18182.1| proteasome subunit alpha type-5 [Paracoccidioides brasiliensis
Pb03]
Length = 272
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 12/167 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRG-EL 53
+D H A SG D E + + F PL + A F G +
Sbjct: 97 IDRHIGCAMSGLQADARSMVEHARVESQNHAFNYSEPLRVESCTQAICDLALRFGEGADG 156
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GP LY+ + T ++ D A G GS + + + +H
Sbjct: 157 EESVMSRPFGVALLIAGYD-EDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQTEYHR 215
Query: 114 GMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKD-GAREYAWRE 159
+S+ EA LV K + ++ + A N + V KD G R Y E
Sbjct: 216 SLSLAEAETLVLKTLKQVMEEKLDA-KNVQLASVTKDLGFRIYGEEE 261
>gi|147225185|emb|CAN13317.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Sus scrofa]
Length = 252
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 10 AASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLA 69
A++G D + + K LY RNG ++ +AA+ + R + ++
Sbjct: 92 ASAGSYIDCQYWERLLAKECRLYYLRNGDRISVSAASKLL-SNMMYQYRGMGLSMGSMIC 150
Query: 70 GYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCIL 129
G+DK+ GP LYY+D T + + G G+ ++ +MD +S+EEA DL + I+
Sbjct: 151 GWDKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIV 209
Query: 130 EIRSR 134
R
Sbjct: 210 HATHR 214
>gi|396458498|ref|XP_003833862.1| similar to proteasome subunit alpha type-5 [Leptosphaeria maculans
JN3]
gi|312210410|emb|CBX90497.1| similar to proteasome subunit alpha type-5 [Leptosphaeria maculans
JN3]
Length = 245
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRG-EL 53
+D H A SG D E + + F PL + A F G E
Sbjct: 70 IDRHIGCAMSGLQADARSMVEHARVESQNHAFNYNEPLRVESCTQAICDLALRFGEGAEG 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + + FH
Sbjct: 130 EESIMSRPFGVALLIAGYD-EDGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHK 188
Query: 114 GMSVEEAVDLVDKCILEI 131
+++ EA L K + ++
Sbjct: 189 SLTLPEAEVLALKTLKQV 206
>gi|125811046|ref|XP_001361733.1| GA11556 [Drosophila pseudoobscura pseudoobscura]
gi|54636909|gb|EAL26312.1| GA11556 [Drosophila pseudoobscura pseudoobscura]
Length = 279
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D V + + K L++ RN ++ AAA+ +A + + ++LAGY
Sbjct: 119 AGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIM-ANIAHEYKGMGLSMGMMLAGY 177
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
DK GP LYY+D + + + G GS F+ ++D + + +EA DL + I
Sbjct: 178 DKR-GPGLYYVDSEGSRTPGNLFSVGSGSLFAYGVLDSGYRWDLQDKEAQDLGQRAI 233
>gi|219567042|dbj|BAH05039.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 238
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 7/156 (4%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L SG D + + K LY+ RN ++ AAA+ + R V +
Sbjct: 76 LGTMSGSAADCKYWERLLAKECRLYRLRNSHRISVAAASKLL-CNMMLGYRGMGLSVGSM 134
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G+DKE GP +YY+D + G G ++ ++D + M+VEEA +L +
Sbjct: 135 ICGWDKE-GPGIYYVDDNGNRLSGRMFSTGSGRNYAYGVLDSGYKEDMTVEEAYELGRRA 193
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
I+ R ++ +V+ +E W + KD
Sbjct: 194 IVHATHR-----DSYSGGVVNMYHIQEDGWIKVCKD 224
>gi|1405327|dbj|BAA10934.1| LMP7 [Ginglymostoma cirratum]
Length = 278
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 7/161 (4%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ +AA+ + R
Sbjct: 107 INPYLLGTMSGSAADCQYWERLLAKQCRLYKLRNKQRISVSAASKLLS-NMMCEYRGMGL 165
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + + G G+ ++ ++D + ++VEEA D
Sbjct: 166 SMGSMICGWDKK-GPGLYYVDDNGTRLSGNMFSTGCGNVYAYGVVDSGYRYDLTVEEAYD 224
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
L + I R + V+ RE W + KD
Sbjct: 225 LGRRAIYHATHR-----DAYTGGFVNMYHMREDGWIKVSKD 260
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 2/158 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
+D + + +G GD + LY+ R G + A A L ++ R P+
Sbjct: 43 IDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSS-RMFPF 101
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDK-AAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
+ I++ GYD G L+ +D + +++ A G GS + +++ + MSVEE +
Sbjct: 102 LTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGI 161
Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
L + R + + ++ KDG + + E
Sbjct: 162 KLALNALKSAMERDTFSGNGISLAVITKDGVKIFEDEE 199
>gi|351697093|gb|EHB00012.1| Proteasome subunit beta type-11 [Heterocephalus glaber]
Length = 300
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 6 HKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVN 65
H L SG D + +Q+ + L R G + A+AA + + R V
Sbjct: 89 HLLGTTSGTSADCATWYRVLQRELRLRALREGQLPSVASAAKLLSA-MMSRYRGLDLCVA 147
Query: 66 ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
L G+D+ +GP+L+Y+ T + D + G GS ++ ++DR +H M+++EA L
Sbjct: 148 TALCGWDR-SGPALFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYHYDMTIQEAYTLA- 205
Query: 126 KC 127
+C
Sbjct: 206 RC 207
>gi|391339580|ref|XP_003744126.1| PREDICTED: proteasome subunit beta type-6-like [Metaseiulus
occidentalis]
Length = 212
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
SG D + + +++ Y+ + G P T AAAN R + R + I+ AGY
Sbjct: 58 SGSAADTQCIADAVAYHLAFYEMQTGKPATVEAAANVFR-NICYKYRDD-MVAGIICAGY 115
Query: 72 DKETGPSLYYIDYIATLHKVDKA-AFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
D E G +Y I L + + + G GS F +D F + MS EE VDL K +
Sbjct: 116 DDERGGGIYSIPPGGCLVEEKRVISAGSGSVFISGFLDALFKNNMSKEECVDLCLKAV 173
>gi|333910183|ref|YP_004483916.1| proteasome subunit beta [Methanotorris igneus Kol 5]
gi|333750772|gb|AEF95851.1| proteasome endopeptidase complex, beta subunit [Methanotorris
igneus Kol 5]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNG--IPLTTAAA--ANFTRGELATALR 58
+D + + +G GD ++ LY+ R G IP + A +N G R
Sbjct: 47 IDDYIAMTIAGSVGDAQALVRYVSAEAKLYKMRTGKNIPPLSCATLISNILHGN-----R 101
Query: 59 KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDK-AAFGYGSYFSLSMMDRHFHSGMSV 117
P++ +++ GYD GP L+ +D I L++ A G GS + +++ + M++
Sbjct: 102 MFPFLTQLIIGGYDLLYGPRLFSLDPIGGLNEESSFTATGSGSPTAYGILELEYSKDMTL 161
Query: 118 EEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
++ ++L K ++ R + + V+K+G
Sbjct: 162 KDGLNLAIKALISAMERDAFSGNGISLAYVNKEG 195
>gi|448530967|ref|ZP_21620801.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
gi|445707407|gb|ELZ59261.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
Length = 243
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 25 IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYDKETGPSLYYID 83
++ SLY+ R G ++ A + T G L LR Y+V +L G D E G +Y ID
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLT-GNL---LRSGAFYIVQPILGGVDDE-GAHIYSID 162
Query: 84 YIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
+ + + G GS ++L ++++ + G++++EA + K I R + +
Sbjct: 163 ALGGTTEEEYTVTGSGSQYALGVLEQEYDDGVTIDEAKTIAAKAIQSAVERDLASGNGIN 222
Query: 144 IKIVDKDGAREYAWRE 159
+ +V DG ++E
Sbjct: 223 VAVVTDDGVDITRYKE 238
>gi|448435232|ref|ZP_21586709.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
gi|445684056|gb|ELZ36442.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
Length = 243
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 25 IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYDKETGPSLYYID 83
++ SLY+ R G ++ A + T G L LR Y+V +L G D E G +Y ID
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLT-GNL---LRSGAFYIVQPILGGVDDE-GAHIYSID 162
Query: 84 YIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
+ + + G GS ++L ++++ + G++++EA + K I R + +
Sbjct: 163 ALGGTTEEEYTVTGSGSQYALGVLEQEYDDGVTIDEAKTIAAKAIQSAVERDLASGNGIN 222
Query: 144 IKIVDKDGAREYAWRE 159
+ +V DG ++E
Sbjct: 223 VAVVTDDGVDITRYKE 238
>gi|972990|gb|AAA75037.1| 20S proteasome subunit Lmp7 [Mus musculus]
Length = 276
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 7/155 (4%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY RNG ++ +AA+ + R
Sbjct: 109 INPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS-NMMLQYRGMGL 167
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DK+ GP LYY+D T + G G+ ++ +MD + +S EEA D
Sbjct: 168 SMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYD 226
Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAW 157
L + I R N+ +V+ +E W
Sbjct: 227 LGRRAIAYATHR-----DNYSGGVVNMYHMKEDGW 256
>gi|315518855|dbj|BAJ51756.1| proteasome subunit, beta type 8 [Oryzias celebensis]
gi|315518866|dbj|BAJ51763.1| proteasome subunit, beta type 8 [Oryzias matanensis]
gi|315518875|dbj|BAJ51769.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
Length = 273
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 7/156 (4%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L SG D + + K LY+ RN ++ AAA+ + R V +
Sbjct: 111 LGTMSGSAADCKYWERLLAKECRLYRLRNSHRISVAAASKLL-CNMMLGYRGMGLSVGSM 169
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G+DKE GP +YY+D + G G ++ ++D + M+VEEA +L +
Sbjct: 170 ICGWDKE-GPGIYYVDDNGNRLSGRMFSTGSGRNYAYGVLDSGYKEDMTVEEAYELGRRA 228
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
I+ R ++ +V+ +E W + KD
Sbjct: 229 IVHATHR-----DSYSGGVVNMYHIQEDGWIKVCKD 259
>gi|219567064|dbj|BAH05050.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 272
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 105 INPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLL-CNMMLGYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 164 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 222
Query: 123 L 123
L
Sbjct: 223 L 223
>gi|195483626|ref|XP_002090364.1| Prosbeta5 [Drosophila yakuba]
gi|194176465|gb|EDW90076.1| Prosbeta5 [Drosophila yakuba]
Length = 282
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGY 71
+G D V + + K L++ RN ++ AAA+ +A + + ++LAG+
Sbjct: 119 AGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIM-ANIAHEYKGMGLSMGMMLAGF 177
Query: 72 DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
DK GP LYY+D + + + G GS ++ ++D +H + EEA +L + I
Sbjct: 178 DKR-GPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDEEAQELGRRAI 233
>gi|41352687|gb|AAS01050.1| putative proteasome 20S beta5 subunit [Brassica napus]
Length = 150
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G DR + + L++ N ++ + A+ + + R
Sbjct: 18 INPYMLGTMAGGAADRQFWHRNLGIKCRLHELANKRRISVSGASKLL-ANMLYSYRGMGL 76
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
V ++AG+D ETGP LYY+D K D+ + G GS ++ ++D + MSVEEA +
Sbjct: 77 SVGTMIAGWD-ETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASE 135
Query: 123 LVDKCI 128
L + I
Sbjct: 136 LARRSI 141
>gi|451846576|gb|EMD59885.1| hypothetical protein COCSADRAFT_40361 [Cochliobolus sativus ND90Pr]
gi|451994786|gb|EMD87255.1| hypothetical protein COCHEDRAFT_1023453 [Cochliobolus
heterostrophus C5]
Length = 245
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRG-EL 53
+D H A SG D E + + F PL + A F G E
Sbjct: 70 IDRHIGCAMSGLQADARSMIEHARVESQNHAFNYAEPLRVESCTQAICDLALRFGEGAEG 129
Query: 54 ATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHS 113
++ P+ V +L+AGYD E GPSLY+ + T ++ D A G GS + + + FH
Sbjct: 130 EESIMSRPFGVALLIAGYD-EDGPSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHK 188
Query: 114 GMSVEEAVDLVDKCILEI 131
+++ EA L K + ++
Sbjct: 189 SLTLAEAEVLTLKTLKQV 206
>gi|448527290|ref|XP_003869461.1| Pup2 alpha5 subunit of the 20S proteasome [Candida orthopsilosis Co
90-125]
gi|380353814|emb|CCG23326.1| Pup2 alpha5 subunit of the 20S proteasome [Candida orthopsilosis]
Length = 255
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 53/100 (53%)
Query: 57 LRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMS 116
L P+ V +L+AG+DK+ GP LY+ + T ++ D A G GS + + ++ +H +S
Sbjct: 133 LMSRPFGVALLIAGFDKQKGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELNNEYHKSLS 192
Query: 117 VEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYA 156
+++A L K + ++ + + + + +G + Y+
Sbjct: 193 LKDAELLALKILKQVMEEKLDCKNAQLASVTESEGFKIYS 232
>gi|444728807|gb|ELW69249.1| Proteasome subunit beta type-5 [Tupaia chinensis]
Length = 263
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + VE+A
Sbjct: 155 SMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQA 211
Query: 121 VDLVDKCILEIRSR 134
DL + I + R
Sbjct: 212 YDLARRAIYQATYR 225
>gi|219567032|dbj|BAH05034.1| proteasome subunit, beta type 8 [Oryzias dancena]
gi|224473817|gb|ACN49158.1| proteasome beta 8 subunit proprotein [Oryzias dancena]
Length = 273
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Query: 8 LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
L SG D + + K LY+ RN ++ AAA+ + R V +
Sbjct: 111 LGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLC-NMMLGYRGMGLSVGSM 169
Query: 68 LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
+ G+DKE GP +YY+D T + G G+ ++ ++D + M++EEA +L +
Sbjct: 170 ICGWDKE-GPGVYYVDDNGTRLSGRMFSTGSGNSYAYGVLDSGYKEDMTIEEAYELGRRG 228
Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
I R ++ +V+ +E W + KD
Sbjct: 229 IAHATHR-----DSYSGGVVNLYHIKEDGWIKVCKD 259
>gi|301781284|ref|XP_002926051.1| PREDICTED: proteasome subunit beta type-5-like [Ailuropoda
melanoleuca]
gi|281343378|gb|EFB18962.1| hypothetical protein PANDA_015661 [Ailuropoda melanoleuca]
Length = 263
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L +G D + + + +Y+ RN ++ AAA+ + +
Sbjct: 96 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL-ANMVYQYKGMGL 154
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAF--GYGSYFSLSMMDRHFHSGMSVEEA 120
+ ++ G+DK GP LYY+D + +++ A F G GS ++ +MDR + + VE+A
Sbjct: 155 SMGTMICGWDKR-GPGLYYVD--SEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQA 211
Query: 121 VDLVDKCILEIRSR 134
DL + I + R
Sbjct: 212 YDLARRAIYQATYR 225
>gi|219567014|dbj|BAH05025.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 272
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 3 LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
++ + L SG D + + K LY+ RN ++ AAA+ + R
Sbjct: 105 INPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLL-CNMMLGYRGMGL 163
Query: 63 MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
+ ++ G+DKE GP LYY+D T + G G+ ++ ++D + M+VEEA +
Sbjct: 164 SMGSMICGWDKE-GPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYE 222
Query: 123 L 123
L
Sbjct: 223 L 223
>gi|62972|emb|CAA40494.1| proteasome C1 subunit [Gallus gallus]
Length = 204
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 12 SGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYM---VNILL 68
+G D + + + +Y+ RN P++ AAA+ LA + + M + ++
Sbjct: 49 AGGAADCSFWERLLARQCRVYELRNKEPISVAAASKL----LANMVYQYKGMGLSMGTMI 104
Query: 69 AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
G+DK GP LYY+D T + A G GS ++ ++D M+ +EA++L + I
Sbjct: 105 CGWDKR-GPGLYYVDSEGTRIPGEAFAVGSGSSYAYGVLDGGRRPDMATDEALELARRAI 163
Query: 129 LEIRSRLVVAPPNFVIKIVDKDGARE 154
+ R + + + V G R
Sbjct: 164 FQAARRDAYSGGSVTVYHVGPRGWRR 189
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,589,616,079
Number of Sequences: 23463169
Number of extensions: 95094693
Number of successful extensions: 213065
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1467
Number of HSP's successfully gapped in prelim test: 1346
Number of HSP's that attempted gapping in prelim test: 210348
Number of HSP's gapped (non-prelim): 2829
length of query: 169
length of database: 8,064,228,071
effective HSP length: 129
effective length of query: 40
effective length of database: 9,332,446,566
effective search space: 373297862640
effective search space used: 373297862640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)