BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 030889
         (169 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O23714|PSB2A_ARATH Proteasome subunit beta type-2-A OS=Arabidopsis thaliana GN=PBD1
           PE=1 SV=1
          Length = 204

 Score =  309 bits (792), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 144/167 (86%), Positives = 157/167 (94%)

Query: 1   MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
           MVLDSHKL+AASGEPGDRVQFTE++QKNVSLY+FRNGIPLTTAAAANFTRGELATALRK+
Sbjct: 36  MVLDSHKLVAASGEPGDRVQFTEYVQKNVSLYKFRNGIPLTTAAAANFTRGELATALRKN 95

Query: 61  PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
           PY VNIL+AGYD E+G SLYYIDYIATLHKVDK AFGYGSYFSLS MDRH+ S MSVEEA
Sbjct: 96  PYSVNILMAGYDDESGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEA 155

Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVS 167
           ++LVDKCILEIRSRLVVAPPNFVIKIVDKDGAR+YAWR+SVKD   +
Sbjct: 156 IELVDKCILEIRSRLVVAPPNFVIKIVDKDGARDYAWRQSVKDVTTA 202


>sp|O24633|PSB2B_ARATH Proteasome subunit beta type-2-B OS=Arabidopsis thaliana GN=PBD2
           PE=1 SV=1
          Length = 199

 Score =  303 bits (775), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 141/163 (86%), Positives = 151/163 (92%)

Query: 1   MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
           M LDSHKL+AASGEPGDRVQFTE++QKNVSLYQFRNGIPL+TAAAANFTRGELATALRK+
Sbjct: 36  MTLDSHKLVAASGEPGDRVQFTEYVQKNVSLYQFRNGIPLSTAAAANFTRGELATALRKN 95

Query: 61  PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
           PY VNIL+AGYDKE G SLYYIDYIATLHKVDK AFGYGSYFSLS MDRH+ S MSVEEA
Sbjct: 96  PYSVNILMAGYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEA 155

Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
           ++LVDKCILEIRSRLV+APPNFVIKIVDKDGAREY WR S  D
Sbjct: 156 IELVDKCILEIRSRLVIAPPNFVIKIVDKDGAREYGWRISTAD 198


>sp|Q9LST6|PSB2_ORYSJ Proteasome subunit beta type-2 OS=Oryza sativa subsp. japonica
           GN=PBD1 PE=2 SV=2
          Length = 212

 Score =  270 bits (690), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 129/169 (76%), Positives = 145/169 (85%), Gaps = 1/169 (0%)

Query: 1   MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS 60
           MVLDSHKL+ ASGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAA ANFTRGELATALRK+
Sbjct: 36  MVLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNIPLSTAATANFTRGELATALRKN 95

Query: 61  PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
           PY VN+LLAGYD + G SLYYIDYIAT HK++K AFGYGSYF LS+MD+ +   MSVEEA
Sbjct: 96  PYYVNVLLAGYDSDVGASLYYIDYIATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEA 155

Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDTPVSSA 169
           VDLVDKCI EIR RLVVAP NF+IKIVDK+GAREYA R +  D+P  +A
Sbjct: 156 VDLVDKCIKEIRLRLVVAPQNFIIKIVDKEGAREYA-RRAYTDSPPEAA 203


>sp|Q55DY7|PSB2_DICDI Proteasome subunit beta type-2 OS=Dictyostelium discoideum GN=psmB2
           PE=3 SV=1
          Length = 198

 Score =  162 bits (409), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 72/154 (46%), Positives = 107/154 (69%), Gaps = 4/154 (2%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
           +D HKL+ ++GE GDRVQFTE+I KN+ LY  RN  P++T AAANF R ELAT++R  PY
Sbjct: 38  IDGHKLLLSAGEAGDRVQFTEYISKNIKLYSLRNSYPMSTPAAANFIRNELATSIRSHPY 97

Query: 63  MVNILLAGYDKET---GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
            +N++LAGYDKE    G SLYY+DY+ +L K++    GY SYF L ++DRH    +S+E+
Sbjct: 98  SINLILAGYDKEVEDGGTSLYYMDYLGSLQKLNFGCHGYASYFLLGLLDRHHKCDLSLED 157

Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
            ++L+  C  E+++R +V+   + +K V  +G +
Sbjct: 158 GINLMHLCTTELKTRFLVS-GKYTLKFVSSEGIK 190


>sp|P40307|PSB2_RAT Proteasome subunit beta type-2 OS=Rattus norvegicus GN=Psmb2 PE=1
           SV=1
          Length = 201

 Score =  154 bits (389), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 75/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)

Query: 8   LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
           L+   GE GD VQF E+IQKNV LY+ RNG  L+  AAANFTR  LA  LR ++PY VN+
Sbjct: 43  LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102

Query: 67  LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
           LLAGYD+  GP+LYY+DY+A L K   AA GYG++ +LS++DR++   +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162

Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
           C+ E++ R ++  P F ++++DKDG
Sbjct: 163 CLEELQKRFILNLPTFSVRVIDKDG 187


>sp|Q9R1P3|PSB2_MOUSE Proteasome subunit beta type-2 OS=Mus musculus GN=Psmb2 PE=1 SV=1
          Length = 201

 Score =  154 bits (388), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 75/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)

Query: 8   LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
           L+   GE GD VQF E+IQKNV LY+ RNG  L+  AAANFTR  LA  LR ++PY VN+
Sbjct: 43  LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102

Query: 67  LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
           LLAGYD+  GP+LYY+DY+A L K   AA GYG++ +LS++DR++   +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162

Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
           C+ E++ R ++  P F ++++DKDG
Sbjct: 163 CLEELQKRFILNLPTFSVRVIDKDG 187


>sp|P49721|PSB2_HUMAN Proteasome subunit beta type-2 OS=Homo sapiens GN=PSMB2 PE=1 SV=1
          Length = 201

 Score =  152 bits (385), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 75/145 (51%), Positives = 105/145 (72%), Gaps = 1/145 (0%)

Query: 8   LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
           L+   GE GD VQF E+IQKNV LY+ RNG  L+  AAANFTR  LA  LR ++PY VN+
Sbjct: 43  LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNL 102

Query: 67  LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
           LLAGYD+  GP+LYY+DY+A L K   AA GYG++ +LS++DR++   +S E AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRK 162

Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
           C+ E++ R ++  P F ++I+DK+G
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDKNG 187


>sp|Q5E9K0|PSB2_BOVIN Proteasome subunit beta type-2 OS=Bos taurus GN=PSMB2 PE=1 SV=1
          Length = 201

 Score =  150 bits (380), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 74/145 (51%), Positives = 106/145 (73%), Gaps = 1/145 (0%)

Query: 8   LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNI 66
           L+   GE GD VQF E+IQKNV LY+ RNG  L+  AAANFTR  LA  LR ++PY VN+
Sbjct: 43  LLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNL 102

Query: 67  LLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDK 126
           LLAGYD+  GP+LYY+DY+A L K   AA GYG++ +LS++DR++   +S E+AV+L+ K
Sbjct: 103 LLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISREKAVELLRK 162

Query: 127 CILEIRSRLVVAPPNFVIKIVDKDG 151
           C+ E++ R ++  P F ++I+D++G
Sbjct: 163 CLEELQKRFILNLPTFSVRIIDRNG 187


>sp|A5DB52|PSB4_PICGU Probable proteasome subunit beta type-4 OS=Meyerozyma
           guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
           JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PRO2 PE=3 SV=1
          Length = 194

 Score =  147 bits (370), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 72/154 (46%), Positives = 103/154 (66%), Gaps = 3/154 (1%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KS 60
           L+SH L+A SGE GD VQF E+IQ N  LY  R N   L+  A A+F R +LAT++R + 
Sbjct: 38  LNSHNLMAYSGEAGDTVQFAEYIQANTQLYTMRENDTELSPKATASFVRNQLATSIRSRK 97

Query: 61  PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
           PY VN+LLAGYD  TG PSL +IDY+ T  ++  AA GY  ++  S++D+H+  GM+ E+
Sbjct: 98  PYQVNVLLAGYDTNTGKPSLNWIDYLGTQVELPYAAHGYAGFYCTSLLDKHYKKGMNFED 157

Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 153
            +DL+ KCI E+ +R+ +      IK+VDK+G +
Sbjct: 158 GLDLLKKCIKELETRMPIDFKGCYIKVVDKEGIK 191


>sp|Q9P6U7|PSB4_NEUCR Probable proteasome subunit beta type-4 OS=Neurospora crassa
           (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
           / FGSC 987) GN=15E6.60 PE=3 SV=1
          Length = 203

 Score =  145 bits (366), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 72/151 (47%), Positives = 99/151 (65%), Gaps = 2/151 (1%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
           L+ H L+A SGE GD VQF E+ Q N  LY  RNG  L+ +A ANF RGELAT+LR + P
Sbjct: 38  LNKHTLMAFSGEAGDTVQFAEYTQANAQLYSMRNGTDLSPSALANFVRGELATSLRSRKP 97

Query: 62  YMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
           Y VN+LL G D  T  PSLY++DY+A+L KV  AA GY  Y+ LS++D+H H  +++ + 
Sbjct: 98  YNVNLLLGGVDPITHKPSLYWLDYLASLAKVPYAAHGYAQYYCLSILDKHHHPDITLHQG 157

Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
           + L++ C  E++ RL +      +K V KDG
Sbjct: 158 IKLLNLCTDELKRRLPIDFKGMTVKAVTKDG 188


>sp|Q09720|PSB4_SCHPO Probable proteasome subunit beta type-4 OS=Schizosaccharomyces
           pombe (strain 972 / ATCC 24843) GN=SPAC31A2.04c PE=3
           SV=1
          Length = 194

 Score =  144 bits (363), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)

Query: 2   VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
           +L+SH L+   GE GD   F E+I  N+SLY  R+ + L+  A A+FTR +LAT+LR + 
Sbjct: 37  ILNSHNLMLYCGEAGDTTNFAEYIAANISLYTLRHNLNLSPEATASFTRKQLATSLRSRK 96

Query: 61  PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
           PY VNILLAGY+   G P L+++DY+AT  +V  A  GY S++ LS+ DR++   ++++E
Sbjct: 97  PYQVNILLAGYETNLGKPELFWLDYLATCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDE 156

Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
           AV ++  C  E++ R+ +    F+ K+VDKDG RE
Sbjct: 157 AVRIMKLCFDELKKRMPIDFKGFICKVVDKDGIRE 191


>sp|P22141|PSB4_YEAST Proteasome subunit beta type-4 OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=PRE1 PE=1 SV=2
          Length = 198

 Score =  134 bits (338), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 96/154 (62%), Gaps = 2/154 (1%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
           L  H L++ +GE GD VQF E+IQ N+ LY  R    L+  A ++F R ELA ++R + P
Sbjct: 38  LSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRP 97

Query: 62  YMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEA 120
           Y VN+L+ GYDK+   P LY IDY+ T  ++   A GY  +++ S++D H+   M+ EE 
Sbjct: 98  YQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEG 157

Query: 121 VDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
           +DL+  C+ E+  R+ +     ++KIVDKDG R+
Sbjct: 158 LDLLKLCVQELEKRMPMDFKGVIVKIVDKDGIRQ 191


>sp|Q9VQE5|PSB2_DROME Probable proteasome subunit beta type-2 OS=Drosophila melanogaster
           GN=Prosbeta4R2 PE=2 SV=3
          Length = 210

 Score =  129 bits (325), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 96/153 (62%), Gaps = 1/153 (0%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSP 61
           L    ++A  G+ GD +QFT+FI KN+ LY+  +G  L+  +AA+FTR  LA  +R  + 
Sbjct: 40  LSDFNMMATVGDGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTR 99

Query: 62  YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAV 121
           Y V +LLAGYD   GP L+YID       ++ A  G+GS F  S++ R+++S +S E+A 
Sbjct: 100 YQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAY 159

Query: 122 DLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
            L+ KC+LEI+ RL++   NF + +VD  G R+
Sbjct: 160 SLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRK 192


>sp|P0CQ12|PSB4_CRYNJ Probable proteasome subunit beta type-4 OS=Cryptococcus neoformans
           var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
           GN=CPR1 PE=3 SV=1
          Length = 224

 Score =  124 bits (310), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/152 (44%), Positives = 91/152 (59%), Gaps = 3/152 (1%)

Query: 2   VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
            L  H  +A SGEPGD   F E+I++N+ LY  RN  PL   AA+ + R  LA A+R + 
Sbjct: 37  TLGPHLAMAFSGEPGDTNNFAEYIERNMRLYNIRNHFPLLPPAASAWVRRTLAEAIRSRH 96

Query: 61  PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
           PY VN+LL G+D  T  P LY+IDY+ T   V  AA G G Y SLS MD+ ++  M  +E
Sbjct: 97  PYAVNLLLGGFDTTTSKPHLYWIDYLGTKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKE 156

Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
            VDL+ KCI E   RL +   +F   ++DK+G
Sbjct: 157 GVDLLRKCIDETEKRLTIK-FDFNCILIDKNG 187


>sp|P0CQ13|PSB4_CRYNB Probable proteasome subunit beta type-4 OS=Cryptococcus neoformans
           var. neoformans serotype D (strain B-3501A) GN=CPR1 PE=3
           SV=1
          Length = 224

 Score =  124 bits (310), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/152 (44%), Positives = 91/152 (59%), Gaps = 3/152 (1%)

Query: 2   VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KS 60
            L  H  +A SGEPGD   F E+I++N+ LY  RN  PL   AA+ + R  LA A+R + 
Sbjct: 37  TLGPHLAMAFSGEPGDTNNFAEYIERNMRLYNIRNHFPLLPPAASAWVRRTLAEAIRSRH 96

Query: 61  PYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
           PY VN+LL G+D  T  P LY+IDY+ T   V  AA G G Y SLS MD+ ++  M  +E
Sbjct: 97  PYAVNLLLGGFDTTTSKPHLYWIDYLGTKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKE 156

Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
            VDL+ KCI E   RL +   +F   ++DK+G
Sbjct: 157 GVDLLRKCIDETEKRLTIK-FDFNCILIDKNG 187


>sp|Q9NHC6|PSB2_TRYBB Proteasome subunit beta type-2 OS=Trypanosoma brucei brucei GN=PSB4
           PE=2 SV=1
          Length = 206

 Score =  124 bits (310), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 96/160 (60%), Gaps = 11/160 (6%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRKSP 61
           LDSHK++A +GE G R  F E+++ N++L + R +G  ++T A A+F R  LA ALR   
Sbjct: 39  LDSHKVVACAGENGPRTHFVEYVKCNMALKKMREHGRMISTHATASFMRNTLAGALRSRD 98

Query: 62  --YMVNILLAGYDK--------ETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHF 111
             Y VN LLAG+D          TG  LYY+DY+ TL +V     GYG+ F  +M+DR +
Sbjct: 99  GLYPVNCLLAGFDVPASAEDDVATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMW 158

Query: 112 HSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
              ++ +E V+L+ KC  E+  R+VV+   F+ K V KDG
Sbjct: 159 RPNLTAQEGVELMQKCCDEVNKRVVVSNNTFICKAVPKDG 198


>sp|P91477|PSB2_CAEEL Proteasome subunit beta type-2 OS=Caenorhabditis elegans GN=pbs-4
           PE=3 SV=2
          Length = 199

 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 3/145 (2%)

Query: 13  GEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGY 71
           GE GD  QF ++ ++N+ LY  RNG  ++ + A +F R  +A  LR +  Y V++L+ GY
Sbjct: 49  GEEGDVAQFGDWTKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVLIGGY 108

Query: 72  D-KETGPSLYYIDYIATLHKVDKAAF-GYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCIL 129
           D KE    L  +DY+A         F G+   F  ++MDR +   M+  E + L++KCI 
Sbjct: 109 DDKEDKAFLGSVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIG 168

Query: 130 EIRSRLVVAPPNFVIKIVDKDGARE 154
           E + R V   P + + I+DK G R+
Sbjct: 169 EAKRRFVANIPGYKVVIIDKKGYRK 193


>sp|Q8SRF1|PSB4_ENCCU Probable proteasome subunit beta type-4 OS=Encephalitozoon cuniculi
           (strain GB-M1) GN=PRE1 PE=1 SV=1
          Length = 197

 Score = 69.7 bits (169), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 81/153 (52%), Gaps = 7/153 (4%)

Query: 2   VLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP 61
           V+    ++A +G  GD  +   ++ ++    + +NGI L+ +  A+  + ++  +LR+  
Sbjct: 37  VIKDRIVMAMTGNQGDAFRTMLYVSESALYEEIQNGIELSPSVLAHMIQNKVHESLRRRQ 96

Query: 62  YMVNILLAGYDKETGPS---LYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 118
             ++ ++AG     GP    L+ +D    +  V   A GY +YF   ++DR +   ++++
Sbjct: 97  LDISSIVAG----RGPEKYDLWSVDKYGAISSVPFCASGYAAYFVYGILDREYSEDITID 152

Query: 119 EAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
            A+ ++ KC+  ++ RL++    F++KIV  DG
Sbjct: 153 AALSIMQKCVNLLKERLMINLEGFMVKIVTDDG 185


>sp|Q8U125|PSB2_PYRFU Proteasome subunit beta 2 OS=Pyrococcus furiosus (strain ATCC 43587
           / DSM 3638 / JCM 8422 / Vc1) GN=psmB2 PE=3 SV=1
          Length = 206

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 9/160 (5%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS-- 60
           +D H  IA +G+ GD +     ++   +LY+   G  ++  A A      LA  L  S  
Sbjct: 47  IDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATL----LANILNGSKY 102

Query: 61  -PYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEE 119
            PY+   L+ GYD++  P L+ +D +  + + + AA G G  F+ S++D  +   MSV +
Sbjct: 103 FPYLGWFLVGGYDEK--PRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVND 160

Query: 120 AVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
            + L  K I     R V      ++  + KDG +EY   E
Sbjct: 161 GIKLAVKAINVAIKRDVFTGDGLLVVTITKDGYKEYRGAE 200


>sp|A5UM14|PSB_METS3 Proteasome subunit beta OS=Methanobrevibacter smithii (strain PS /
           ATCC 35061 / DSM 861) GN=psmB PE=3 SV=1
          Length = 204

 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 6/161 (3%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
           ++ H +   +G  GD     + I+  VSLYQ RN   ++  AAA+ T    A  LR  P 
Sbjct: 45  INDHIVTTIAGSVGDAQNLMKIIEAEVSLYQMRNNDKISVKAAASVT----ANILRSGPM 100

Query: 63  MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
            V  LL G D +  PSLY +D    + +    + G GS  +  +++  +H  ++ +E ++
Sbjct: 101 YVQTLLGGMDGDK-PSLYSLDPAGGMIEDTYISTGSGSIVAYGVLEDRYHEEITTDEGLE 159

Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKD 163
           +  + I     R   +   +++  V KDG  E   +E V D
Sbjct: 160 IAVRAIKAASERDTFSGNGYLVAKVTKDGF-EMLDKEKVND 199


>sp|C5A7L1|PSB1_THEGJ Proteasome subunit beta 1 OS=Thermococcus gammatolerans (strain DSM
           15229 / JCM 11827 / EJ3) GN=psmB1 PE=3 SV=1
          Length = 201

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
           +D H  IA +G  GD +     ++    LY+ + G  ++  A A      L  + R  PY
Sbjct: 47  IDDHLAIAGAGLVGDILSLVRLLRAEAKLYRAKVGREMSVKALATLVSNVLHGS-RHLPY 105

Query: 63  MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
               L+ GYD +  P LY ID    + +    A G G  F+L++++ +F  GM ++E +D
Sbjct: 106 FAWFLIGGYDVK--PRLYSIDAAGGVTEERFIAAGSGMEFALALLEENFSDGMGLDEGID 163

Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
           L  + +     R V       +  + K+G RE
Sbjct: 164 LAVRAVKAAIRRDVYTGEGVTVVAITKEGYRE 195


>sp|D3E0A3|PSB_METRM Proteasome subunit beta OS=Methanobrevibacter ruminantium (strain
           ATCC 35063 / DSM 1093 / JCM 13430 / M1) GN=psmB PE=3
           SV=1
          Length = 207

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 5/149 (3%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
           +D+H     +G   D     + I    SLY+ RNG  ++  AAA  +    +  L  SP 
Sbjct: 46  IDNHIAATIAGSVADAQTLMKVISAETSLYRLRNGKDISLEAAAAVS----SNILHSSPA 101

Query: 63  MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
            V  L+ G D +TG S+Y +D    + K    + G GS F+  +++  F+  ++VEEA +
Sbjct: 102 YVQTLIGGVD-DTGASIYSLDAAGGMIKDTFISTGSGSTFAYGVLEDRFYEDITVEEATE 160

Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDG 151
           +  + I     R   +   F++  V KDG
Sbjct: 161 VAIRAIKAATERDTFSGNGFLVANVTKDG 189


>sp|A3CUS9|PSB_METMJ Proteasome subunit beta OS=Methanoculleus marisnigri (strain ATCC
           35101 / DSM 1498 / JR1) GN=psmB PE=3 SV=1
          Length = 214

 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 3/148 (2%)

Query: 9   IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
           +  +G  GD  Q    +Q   +L++ R G  ++  AA+      L    R  PY V +L+
Sbjct: 54  LTTAGGVGDAQQLVRILQVECNLFEMRRGKTMSVGAASTLLSNYLNQN-RYYPYYVQLLM 112

Query: 69  AGYDKETGPSLYYIDYIATLHK-VDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
            G+D E GPS+Y +D +    K  D  A G GS F+  +++  + +GM  ++A DL  + 
Sbjct: 113 GGFDDE-GPSVYSVDAMGGATKEEDIVATGSGSPFAYGVLEDQYRAGMKEDDAKDLAVRA 171

Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREY 155
           +     R   +  + ++ ++ KD   E+
Sbjct: 172 VRSAMRRDSASGEDIMVVVITKDKYEEH 199


>sp|O50110|PSB2_PYRHO Proteasome subunit beta 2 OS=Pyrococcus horikoshii (strain ATCC
           700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
           GN=psmB2 PE=3 SV=1
          Length = 207

 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 3/157 (1%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
           +D H  IA +G+ GD +     ++    LY  ++G  ++  A A      +    +  PY
Sbjct: 47  IDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLL-ANIMNGAKYFPY 105

Query: 63  MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
           +   L+ GYD++  P LY +D +  + +   A  G G  F+ S++D  +   +++EE + 
Sbjct: 106 LAWFLVGGYDEK--PKLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIK 163

Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
           L  K I     R V +    ++  + K+G +E +  E
Sbjct: 164 LAVKAINTAIKRDVFSGDGILVVTITKEGYKELSDSE 200


>sp|Q5JHL8|PSB2_PYRKO Proteasome subunit beta 2 OS=Pyrococcus kodakaraensis (strain ATCC
           BAA-918 / JCM 12380 / KOD1) GN=psmB2 PE=3 SV=1
          Length = 199

 Score = 63.5 bits (153), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 10/150 (6%)

Query: 9   IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
           I  +G  GD       ++     YQF  G P+T  A A+     L+  L ++   PYMV 
Sbjct: 49  ITTAGSVGDVQALARMLEAEARYYQFTWGRPMTAKAMAHL----LSNILNENKWFPYMVQ 104

Query: 66  ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
           I++ GY +E  P+L  +D +  L   D  A G GS F++++++  F   MS+EEA +L  
Sbjct: 105 IIIGGYVEE--PTLANLDPLGGLIFDDYTATGSGSPFAIAVLEDGFRKDMSLEEAKELAV 162

Query: 126 KCILEIRSRLVVAPPNFV-IKIVDKDGARE 154
           + +     R V      V + ++ KDG +E
Sbjct: 163 RAVRTAGKRDVYTGDRKVQVVVISKDGMKE 192


>sp|C5A2D5|PSB2_THEGJ Proteasome subunit beta 2 OS=Thermococcus gammatolerans (strain DSM
           15229 / JCM 11827 / EJ3) GN=psmB2 PE=3 SV=1
          Length = 200

 Score = 63.5 bits (153), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 12/151 (7%)

Query: 9   IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
           I  +G  GD       ++     YQF  G P+TT A AN     L+  L ++   PYMV 
Sbjct: 50  ITTAGSVGDVQALARMLEAQARYYQFTWGRPMTTRAMANL----LSNILNENKWFPYMVQ 105

Query: 66  ILLAGY-DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLV 124
           I++ GY DK   P L  +D +  L      A G GS F++++++  +   MS+EEA +L 
Sbjct: 106 IIIGGYVDK---PELASVDALGGLVFEKYTATGSGSPFAIAIIEDGYREDMSIEEAKELA 162

Query: 125 DKCILEIRSRLVVAPPNFV-IKIVDKDGARE 154
            + +     R V      V + ++ KDG +E
Sbjct: 163 VRAVKTAGKRDVYTGERKVQVVVITKDGMKE 193


>sp|Q980L4|PSB1_SULSO Proteasome subunit beta 1 OS=Sulfolobus solfataricus (strain ATCC
           35092 / DSM 1617 / JCM 11322 / P2) GN=psmB1 PE=3 SV=1
          Length = 196

 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)

Query: 8   LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
           L+A +G  GD    T  +   +  Y+   G P++  AAA      +    +  P++  IL
Sbjct: 46  LMAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAAAKLLS-VILYQYKVMPFISEIL 104

Query: 68  LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
             G D E GP LY +D I +L + + AA G G+  ++ +++  +   MS++ A  L+ K 
Sbjct: 105 FGGVD-EKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITKA 163

Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGARE 154
           I     R + +     + I+DK G  E
Sbjct: 164 IKASIERDITSGDGIDLAIIDKKGNYE 190


>sp|D0KRX1|PSB1_SULS9 Proteasome subunit beta 1 OS=Sulfolobus solfataricus (strain 98/2)
           GN=psmB1 PE=3 SV=1
          Length = 196

 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)

Query: 8   LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
           L+A +G  GD    T  +   +  Y+   G P++  AAA      +    +  P++  IL
Sbjct: 46  LMAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAAAKLLS-VILYQYKVMPFISEIL 104

Query: 68  LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
             G D E GP LY +D I +L + + AA G G+  ++ +++  +   MS++ A  L+ K 
Sbjct: 105 FGGVD-EKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITKA 163

Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGARE 154
           I     R + +     + I+DK G  E
Sbjct: 164 IKASIERDITSGDGIDLAIIDKKGNYE 190


>sp|Q5JDJ9|PSB1_PYRKO Proteasome subunit beta 1 OS=Pyrococcus kodakaraensis (strain ATCC
           BAA-918 / JCM 12380 / KOD1) GN=psmB1 PE=3 SV=1
          Length = 203

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 3/157 (1%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
           +D H  IA +G  GD +     ++    LY+ +    ++  A A  T   L +  R   Y
Sbjct: 44  IDDHLAIAGAGTVGDILSLVRLLRAEAKLYRAKVSREMSVKALATLTSNILHSG-RGFAY 102

Query: 63  MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
           M   L+ GYD  + P LY ID    + +    A G G  F+ S+++ ++  G+ +EE V 
Sbjct: 103 MAWFLVGGYD--SAPRLYSIDAAGGVTEDRFTAAGSGMEFAFSVLEENYRDGIPLEEGVK 160

Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
           L  + I     R V       +  + ++G RE++  E
Sbjct: 161 LALRAIKAATKRDVFTGGGVTLVTITEEGYREWSEEE 197


>sp|C6A2V9|PSB1_THESM Proteasome subunit beta 1 OS=Thermococcus sibiricus (strain MM 739
           / DSM 12597) GN=psmB1 PE=3 SV=1
          Length = 207

 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 3/157 (1%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
           +D H  +A +G  GD +     ++    LY+ + G  ++T A A  T   + +  +  PY
Sbjct: 46  VDDHLALAGAGAVGDILSLVRALRAESKLYRAKVGKEMSTKALATLTS-NILSGRKYLPY 104

Query: 63  MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
               L+ GYD++  PSLY ID    + +    + G G  F+ S++D  +   +++   V 
Sbjct: 105 FGWFLIGGYDEK--PSLYSIDMAGGITEDKYVSAGSGMEFAYSILDNEYSEKITLNNGVK 162

Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
           L  K I     R V      ++  +D++G RE +  E
Sbjct: 163 LAIKAINAAIKRDVFTGDGIMVVTIDREGYRELSKEE 199


>sp|B6YXV3|PSB2_THEON Proteasome subunit beta 2 OS=Thermococcus onnurineus (strain NA1)
           GN=psmB2 PE=3 SV=1
          Length = 200

 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 3/120 (2%)

Query: 9   IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
           I  +G  GD       ++     YQF  G P++T A AN     L    +  PY+V I+L
Sbjct: 50  ITTAGSVGDVQALARMLEAEARYYQFTWGKPMSTKAMANLLSNIL-NGNKWFPYLVQIIL 108

Query: 69  AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
            GY +E  P+L  +D +  L   D  A G GS F++++++  +   MS+EEA +L  + +
Sbjct: 109 GGYVEE--PTLANLDPLGGLIFDDYTATGSGSPFAIAVLEDGYKKDMSIEEAKELAVRAV 166


>sp|C3N7K2|PSB2_SULIY Proteasome subunit beta 2 OS=Sulfolobus islandicus (strain
           Y.G.57.14 / Yellowstone #1) GN=psmB2 PE=3 SV=1
          Length = 196

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)

Query: 8   LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
           L+A +G  GD    T  +   +  Y+   G P++  AAA      +    +  P++  IL
Sbjct: 46  LMAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLS-VILYQYKVMPFISEIL 104

Query: 68  LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
             G D E GP LY +D I +L + + AA G G+  ++ +++  +   M+++ A  L+ K 
Sbjct: 105 FGGVD-EKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKA 163

Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGARE 154
           I     R + +     + I+DK G  E
Sbjct: 164 IKASIERDITSGDGIDLAIMDKKGNYE 190


>sp|C3MY41|PSB2_SULIM Proteasome subunit beta 2 OS=Sulfolobus islandicus (strain M.14.25
           / Kamchatka #1) GN=psmB2 PE=3 SV=1
          Length = 196

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)

Query: 8   LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
           L+A +G  GD    T  +   +  Y+   G P++  AAA      +    +  P++  IL
Sbjct: 46  LMAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLS-VILYQYKVMPFISEIL 104

Query: 68  LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
             G D E GP LY +D I +L + + AA G G+  ++ +++  +   M+++ A  L+ K 
Sbjct: 105 FGGVD-EKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKA 163

Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGARE 154
           I     R + +     + I+DK G  E
Sbjct: 164 IKASIERDITSGDGIDLAIMDKKGNYE 190


>sp|C3MRE5|PSB2_SULIL Proteasome subunit beta 2 OS=Sulfolobus islandicus (strain L.S.2.15
           / Lassen #1) GN=psmB2 PE=3 SV=1
          Length = 196

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)

Query: 8   LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
           L+A +G  GD    T  +   +  Y+   G P++  AAA      +    +  P++  IL
Sbjct: 46  LMAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLS-VILYQYKVMPFISEIL 104

Query: 68  LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
             G D E GP LY +D I +L + + AA G G+  ++ +++  +   M+++ A  L+ K 
Sbjct: 105 FGGVD-EKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKA 163

Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGARE 154
           I     R + +     + I+DK G  E
Sbjct: 164 IKASIERDITSGDGIDLAIMDKKGNYE 190


>sp|C4KIR0|PSB2_SULIK Proteasome subunit beta 2 OS=Sulfolobus islandicus (strain M.16.4 /
           Kamchatka #3) GN=psmB2 PE=3 SV=1
          Length = 196

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)

Query: 8   LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
           L+A +G  GD    T  +   +  Y+   G P++  AAA      +    +  P++  IL
Sbjct: 46  LMAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLS-VILYQYKVMPFISEIL 104

Query: 68  LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
             G D E GP LY +D I +L + + AA G G+  ++ +++  +   M+++ A  L+ K 
Sbjct: 105 FGGVD-EKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKA 163

Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGARE 154
           I     R + +     + I+DK G  E
Sbjct: 164 IKASIERDITSGDGIDLAIMDKKGNYE 190


>sp|D2PDG6|PSB2_SULID Proteasome subunit beta 2 OS=Sulfolobus islandicus (strain L.D.8.5
           / Lassen #2) GN=psmB2 PE=3 SV=1
          Length = 196

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)

Query: 8   LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
           L+A +G  GD    T  +   +  Y+   G P++  AAA      +    +  P++  IL
Sbjct: 46  LMAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLS-VILYQYKVMPFISEIL 104

Query: 68  LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
             G D E GP LY +D I +L + + AA G G+  ++ +++  +   M+++ A  L+ K 
Sbjct: 105 FGGVD-EKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKA 163

Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGARE 154
           I     R + +     + I+DK G  E
Sbjct: 164 IKASIERDITSGDGIDLAIMDKKGNYE 190


>sp|C3MZI0|PSB2_SULIA Proteasome subunit beta 2 OS=Sulfolobus islandicus (strain M.16.27)
           GN=psmB2 PE=3 SV=1
          Length = 196

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)

Query: 8   LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
           L+A +G  GD    T  +   +  Y+   G P++  AAA      +    +  P++  IL
Sbjct: 46  LMAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLS-VILYQYKVMPFISEIL 104

Query: 68  LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
             G D E GP LY +D I +L + + AA G G+  ++ +++  +   M+++ A  L+ K 
Sbjct: 105 FGGVD-EKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKA 163

Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGARE 154
           I     R + +     + I+DK G  E
Sbjct: 164 IKASIERDITSGDGIDLAIMDKKGNYE 190


>sp|C3NFX2|PSB1_SULIN Proteasome subunit beta 1 OS=Sulfolobus islandicus (strain
           Y.N.15.51 / Yellowstone #2) GN=psmB1 PE=3 SV=1
          Length = 196

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)

Query: 8   LIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNIL 67
           L+A +G  GD    T  +   +  Y+   G P++  AAA      +    +  P++  IL
Sbjct: 46  LMAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLS-VILYQYKVMPFISEIL 104

Query: 68  LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
             G D E GP LY +D I +L + + AA G G+  ++ +++  +   M+++ A  L+ K 
Sbjct: 105 FGGVD-EKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKA 163

Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGARE 154
           I     R + +     + I+DK G  E
Sbjct: 164 IKASIERDITSGDGIDLAIMDKKGNYE 190


>sp|A3DN27|PSB2_STAMF Proteasome subunit beta 2 OS=Staphylothermus marinus (strain ATCC
           43588 / DSM 3639 / F1) GN=psmB2 PE=3 SV=1
          Length = 208

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 10/119 (8%)

Query: 32  YQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKV 91
           Y+   G P+  +A A+     L   LR SPY+V +LL GYD + GP L+YID   +L + 
Sbjct: 75  YKLELGRPIKVSALASNLSIILNAYLRMSPYIVQLLLGGYD-DNGPHLFYIDLFGSLSEE 133

Query: 92  DKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSR---------LVVAPPN 141
              A G GS  +  +++  + S +S++EA +L  K +     R         +VV  PN
Sbjct: 134 KYMATGSGSPTAFGVLEEEYRSDLSLDEAKELAFKAVSAATKRDGFSGEGVDIVVIGPN 192


>sp|B1L6X8|PSB2_KORCO Proteasome subunit beta 2 OS=Korarchaeum cryptofilum (strain OPF8)
           GN=psmB2 PE=3 SV=1
          Length = 198

 Score = 60.1 bits (144), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 71/145 (48%), Gaps = 1/145 (0%)

Query: 9   IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
           ++ +G PGD  +  + ++ N+++Y+  N    T    A      L        Y   +++
Sbjct: 46  VSTAGLPGDFQELVDVLKYNITMYELENEKAATPTNVAKLLSILLYQGRFSGIYYAELVV 105

Query: 69  AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
            G D  +GP ++ +D    L + + +A G G+  +  +++R F  GMS +EAV+L ++ +
Sbjct: 106 GGIDN-SGPKIFVLDPAGGLMEENFSAVGSGAQIATGILERFFKEGMSEKEAVELAERAM 164

Query: 129 LEIRSRLVVAPPNFVIKIVDKDGAR 153
            E  SR  ++     + I+   G+R
Sbjct: 165 REAISRDALSGDGIDLLIITSKGSR 189


>sp|Q975D1|PSB2_SULTO Proteasome subunit beta 2 OS=Sulfolobus tokodaii (strain DSM 16993
           / JCM 10545 / NBRC 100140 / 7) GN=psmB2 PE=3 SV=1
          Length = 207

 Score = 60.1 bits (144), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 5/150 (3%)

Query: 9   IAASGEPGDRVQFTEFIQKNVSLYQFRNGI-PLTTAAAANFTRGELATALRKSPYMVNIL 67
           I  +G   D +QF   + KN+  Y    G+ P+T  A A +    L+ + +  PY+V IL
Sbjct: 56  ITTAGSVAD-LQFIYDLLKNIYHYNLITGMRPITIKALATYLANMLSFS-KYLPYIVQIL 113

Query: 68  LAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKC 127
           + G D++  P LY +DY+  + + D  A G GS  ++ +++  +   M+++EA DL  + 
Sbjct: 114 IGGVDEQ--PRLYNLDYVGDITEEDYTATGSGSVEAIGVIEDEYRPDMTLDEAADLARRA 171

Query: 128 ILEIRSRLVVAPPNFVIKIVDKDGAREYAW 157
           I     R        ++  + K+G  E  +
Sbjct: 172 IFSSIKRDPYTGTGVIVSKITKNGHEEKEY 201


>sp|C6A3R1|PSB2_THESM Proteasome subunit beta 2 OS=Thermococcus sibiricus (strain MM 739
           / DSM 12597) GN=psmB2 PE=3 SV=1
          Length = 199

 Score = 59.7 bits (143), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 10/150 (6%)

Query: 9   IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
           I  +G  GD       ++     YQF  G P+T  A AN     L+  L +S   PYMV 
Sbjct: 49  ITTAGSVGDLQALARMLEAEAKYYQFTWGKPMTAKAMANL----LSNILNESKWFPYMVQ 104

Query: 66  ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
           I++ GY +E  P+L  +D +  L   +    G GS F++++++  +   MS+E+A +L  
Sbjct: 105 IIIGGYVEE--PTLASLDPLGGLIFDNYTTTGSGSPFAIAILEDGYKEDMSIEDARELAI 162

Query: 126 KCILEIRSRLV-VAPPNFVIKIVDKDGARE 154
           K +     R V        +  + K+G +E
Sbjct: 163 KAVRTAGKRDVYTGERKIQVITITKEGMKE 192


>sp|Q9V0N9|PSB2_PYRAB Proteasome subunit beta 2 OS=Pyrococcus abyssi (strain GE5 / Orsay)
           GN=psmB2 PE=3 SV=1
          Length = 207

 Score = 59.7 bits (143), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 3/152 (1%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
           +D H  IA +G+ GD +     ++    LY  ++G  ++  A A      L  A R  PY
Sbjct: 47  IDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGA-RMLPY 105

Query: 63  MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
           +   L+ G+D++  P LY +D +  + +    A G G  F+ S++D  +   + V E + 
Sbjct: 106 LAWFLVGGFDEK--PRLYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIK 163

Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 154
           +  + I     R V +    ++  + ++G RE
Sbjct: 164 IAVEAINSAIKRDVFSGDGIMVVTITEEGYRE 195


>sp|Q9V247|PSB1_PYRAB Proteasome subunit beta 1 OS=Pyrococcus abyssi (strain GE5 / Orsay)
           GN=psmB1 PE=3 SV=1
          Length = 197

 Score = 59.7 bits (143), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 10/150 (6%)

Query: 9   IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKS---PYMVN 65
           I  +G  GD       ++     YQF  G P+TT A AN     L+  L ++   PY+V 
Sbjct: 49  ITTAGSVGDVQMIARILEAEARYYQFTWGRPMTTRAMANL----LSNILNENKWFPYLVQ 104

Query: 66  ILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVD 125
           I++ GY  E  P++  +D +  L   D  A G G+ F++++++  +   + +E+A +L  
Sbjct: 105 IIIGGYVDE--PTIANLDPLGGLIFDDYTATGSGTPFAIAILEEGYRKNLGIEKAKELAI 162

Query: 126 KCILEIRSRLV-VAPPNFVIKIVDKDGARE 154
           K +    +R V        +  + KDG +E
Sbjct: 163 KAVKAAGARDVYTGSKKIQVVTITKDGMKE 192


>sp|A2BN27|PSB2_HYPBU Proteasome subunit beta 2 OS=Hyperthermus butylicus (strain DSM
           5456 / JCM 9403) GN=psmB2 PE=3 SV=1
          Length = 212

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 3/149 (2%)

Query: 9   IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
           +  +G   D     E++  +   Y+  N   ++  AAA +    L +A +  PY+V +LL
Sbjct: 58  MTTAGLVADAQMLAEWLANHTHYYEIVNKRRMSIHAAAQYLSIILHSA-KFYPYIVQLLL 116

Query: 69  AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
            GYD  T P LY ID+  ++ +    A G GS  ++ +++  +   +S+EEAV+L  + +
Sbjct: 117 GGYD--TQPRLYNIDWFGSVTEEKYVATGSGSPTAIGVIEDQYSPNLSMEEAVELAKRAV 174

Query: 129 LEIRSRLVVAPPNFVIKIVDKDGAREYAW 157
                R         + ++ KD  REY++
Sbjct: 175 ASSIRRDTFTGNGVDVVVIGKDFYREYSF 203


>sp|O81149|PSA5A_ARATH Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1
           PE=1 SV=1
          Length = 237

 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 12/155 (7%)

Query: 1   MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
           M +D H   A SG   D     E  +     ++F  G P+T  +        A  F  GE
Sbjct: 68  MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127

Query: 53  LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
             +  R  P+ V++L+AG+D E GPSLYY D   T  + +  A G GS  + S +   F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIV 147
             +S++EA + +   IL+      V P N  I  V
Sbjct: 185 KDLSLQEA-ETIAVSILKQVMEEKVTPNNVDIAKV 218


>sp|B6YSW2|PSB1_THEON Proteasome subunit beta 1 OS=Thermococcus onnurineus (strain NA1)
           GN=psmB1 PE=3 SV=1
          Length = 203

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 3/157 (1%)

Query: 3   LDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPY 62
           +D H  +A +G  GD +     ++  V LY+ + G  ++  A A  T   L  + R  PY
Sbjct: 44  IDDHLALAGAGSVGDILSLVRLLRAEVKLYRAKVGREISVKALATLTSNILHGS-RFMPY 102

Query: 63  MVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVD 122
               L+AGYD++  P+LY +D    + +    A G G   + ++++  +   ++VEE V 
Sbjct: 103 FGWFLIAGYDEK--PALYSLDMAGGVTEDKFTAAGSGMELAFAVLEDGYKDDINVEEGVK 160

Query: 123 LVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRE 159
           L  K I     R V       +  V ++G RE    E
Sbjct: 161 LALKAIKIATRRDVFTGDGITLVTVTEEGYRELNREE 197


>sp|D4GYZ1|PSB_HALVD Proteasome subunit beta OS=Haloferax volcanii (strain ATCC 29605 /
           DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM
           B-1768 / DS2) GN=psmB PE=1 SV=1
          Length = 243

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 6/128 (4%)

Query: 25  IQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYDKETGPSLYYID 83
           ++  V LY+ R G  ++  A +      +   LR    Y+V  +L G D ETGP +Y ID
Sbjct: 108 LRAEVRLYEARRGEDMSMQALSTL----VGNFLRSGGFYVVQPILGGVD-ETGPHIYSID 162

Query: 84  YIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
              ++ + +    G GS ++L ++++ F  G+S+EEA  +  K I     R + +     
Sbjct: 163 PAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVERDLASGNGIN 222

Query: 144 IKIVDKDG 151
           I +V +DG
Sbjct: 223 IAVVTEDG 230


>sp|Q42134|PSA5B_ARATH Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2
           PE=1 SV=2
          Length = 237

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 13/151 (8%)

Query: 1   MVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAA--------AANFTRGE 52
           M +D H   A SG   D     E  +     ++F  G P+T  +        A  F  GE
Sbjct: 68  MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127

Query: 53  LATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFH 112
             +  R  P+ V++L+AG+D E GPSLYY D   T  + +  A G GS  + S +   F+
Sbjct: 128 EESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 113 SGMSVEEAVDLVDKCILEIRSRLVVAPPNFV 143
             ++++EA  +    + ++    V   PN V
Sbjct: 185 KDITLQEAETIAVSILKQVMEEKVT--PNNV 213


>sp|Q8U4C9|PSB1_PYRFU Proteasome subunit beta 1 OS=Pyrococcus furiosus (strain ATCC 43587
           / DSM 3638 / JCM 8422 / Vc1) GN=psmB1 PE=3 SV=1
          Length = 196

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 4/147 (2%)

Query: 9   IAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILL 68
           I  +G  GD      +++     Y F  G P+TT A AN     L    R  PY+V I++
Sbjct: 49  ITTAGSVGDVQMLARYLEAEARYYYFTWGRPMTTKAMANLLSNILNEN-RWFPYLVQIII 107

Query: 69  AGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCI 128
            GY  E  P++  +D    L   D  A G G+ F++++++  +   +++EEA +L  + +
Sbjct: 108 GGYVDE--PTIANLDPFGGLIFDDYTATGSGTPFAIAVLEEGYREDLTIEEAKELAIRAV 165

Query: 129 LEIRSRLVVAPPNFV-IKIVDKDGARE 154
                R V      V +  + KDG +E
Sbjct: 166 RAAGRRDVYTGSKKVQVVTITKDGMKE 192


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.135    0.389 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,521,044
Number of Sequences: 539616
Number of extensions: 2274183
Number of successful extensions: 5710
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 5468
Number of HSP's gapped (non-prelim): 289
length of query: 169
length of database: 191,569,459
effective HSP length: 109
effective length of query: 60
effective length of database: 132,751,315
effective search space: 7965078900
effective search space used: 7965078900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)