Query 030891
Match_columns 169
No_of_seqs 39 out of 41
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 09:25:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030891.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030891hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2i09a1 c.76.1.5 (A:2-107,A:22 74.4 1.5 0.00011 30.0 3.7 61 42-108 148-210 (283)
2 d2nqra3 c.57.1.2 (A:178-326) M 70.8 1.2 9E-05 32.0 2.7 47 9-73 27-73 (149)
3 d2ftsa3 c.57.1.2 (A:499-653) G 66.3 1.6 0.00012 31.1 2.6 47 9-73 27-73 (155)
4 d1y5ea1 c.57.1.1 (A:12-166) Mo 64.5 4.3 0.00031 28.5 4.6 60 2-77 2-72 (155)
5 d1wu2a3 c.57.1.2 (A:181-324) M 60.5 1.8 0.00013 31.0 1.8 49 9-75 31-79 (144)
6 d2g2ca1 c.57.1.1 (A:1-163) Put 58.6 3.1 0.00022 29.6 2.9 56 1-73 1-73 (163)
7 d1eyra_ c.68.1.13 (A:) CMP acy 55.4 22 0.0016 24.3 7.1 75 6-103 49-123 (225)
8 d1uz5a3 c.57.1.2 (A:181-328) M 54.7 3.7 0.00027 29.1 2.7 50 9-76 27-76 (148)
9 d2ayxa1 c.23.1.1 (A:817-949) S 50.1 11 0.00082 25.4 4.6 43 13-79 23-65 (133)
10 d1dcfa_ c.23.1.2 (A:) Receiver 49.7 9.4 0.00068 25.8 4.2 53 2-79 7-63 (134)
11 d1krwa_ c.23.1.1 (A:) NTRC rec 43.1 18 0.0013 23.8 4.8 43 13-79 18-60 (123)
12 d1qwja_ c.68.1.13 (A:) CMP acy 42.9 46 0.0033 22.8 7.9 75 7-105 49-123 (228)
13 d1ny5a1 c.23.1.1 (A:1-137) Tra 41.0 7.1 0.00052 26.5 2.3 43 13-79 15-57 (137)
14 d2d8za2 g.39.1.3 (A:33-64) Fou 40.5 3.6 0.00026 23.6 0.5 11 154-164 11-21 (32)
15 d1xfka_ c.42.1.1 (A:) Formimid 39.7 17 0.0013 28.2 4.8 51 10-77 197-247 (324)
16 d1n3ya_ c.62.1.1 (A:) Integrin 38.3 16 0.0012 25.2 4.0 56 92-154 20-75 (189)
17 d1mkza_ c.57.1.1 (A:) MoaB {Es 38.0 28 0.002 24.6 5.4 58 3-77 9-77 (170)
18 d1k7ha_ c.76.1.1 (A:) Alkaline 36.8 8.4 0.00061 32.4 2.6 62 40-108 284-346 (476)
19 d2d00a1 c.149.1.1 (A:6-109) V- 36.7 26 0.0019 23.3 4.8 51 6-78 2-53 (104)
20 d1mvoa_ c.23.1.1 (A:) PhoP rec 35.0 8.1 0.00059 25.5 1.8 43 13-79 17-59 (121)
21 d1okkd2 c.37.1.10 (D:97-303) G 34.7 37 0.0027 25.0 5.8 59 2-77 34-99 (207)
22 d1ls1a2 c.37.1.10 (A:89-295) G 34.5 68 0.005 23.4 7.3 104 10-146 53-164 (207)
23 d1jlja_ c.57.1.1 (A:) Gephyrin 32.8 14 0.001 25.8 2.9 55 2-72 2-72 (169)
24 d1mb3a_ c.23.1.1 (A:) Cell div 31.9 21 0.0015 23.2 3.6 43 13-79 16-58 (123)
25 d2qy9a2 c.37.1.10 (A:285-495) 30.4 66 0.0048 23.8 6.7 49 11-76 53-101 (211)
26 d1zeda1 c.76.1.1 (A:1-479) Alk 30.2 15 0.0011 31.0 3.0 63 40-109 285-348 (479)
27 d2pl1a1 c.23.1.1 (A:1-119) Pho 28.8 13 0.00092 24.6 1.9 42 14-79 16-57 (119)
28 d1j8yf2 c.37.1.10 (F:87-297) G 28.8 1E+02 0.0075 22.6 9.6 95 2-127 40-141 (211)
29 d1zh2a1 c.23.1.1 (A:2-120) Tra 28.4 24 0.0018 23.0 3.3 42 13-78 15-56 (119)
30 d1wmaa1 c.2.1.2 (A:2-276) Carb 26.5 46 0.0033 24.3 5.0 83 2-125 2-90 (275)
31 d1yioa2 c.23.1.1 (A:3-130) Res 26.1 43 0.0031 21.8 4.4 70 14-129 18-88 (128)
32 d2a9pa1 c.23.1.1 (A:2-118) DNA 26.0 26 0.0019 22.8 3.1 42 13-78 15-56 (117)
33 g1sc3.1 c.17.1.1 (A:,B:) Inter 25.4 21 0.0015 26.3 2.8 48 14-76 65-112 (261)
34 d1kgsa2 c.23.1.1 (A:2-123) Pho 25.4 18 0.0013 23.7 2.3 42 14-79 17-58 (122)
35 g1pyo.1 c.17.1.1 (A:,B:) Caspa 25.2 24 0.0017 26.1 3.2 48 13-75 55-102 (257)
36 d1psza_ c.92.2.2 (A:) Pneumoco 25.0 41 0.003 24.9 4.6 77 4-107 9-85 (286)
37 d2o14a2 c.23.10.8 (A:160-367) 25.0 26 0.0019 23.9 3.1 15 65-79 70-84 (208)
38 d1zgza1 c.23.1.1 (A:2-121) Tor 25.0 19 0.0014 23.4 2.3 42 13-78 16-57 (120)
39 d1y6va1 c.76.1.1 (A:1-449) Alk 24.9 14 0.001 31.0 1.9 61 40-107 296-357 (449)
40 d1yzfa1 c.23.10.5 (A:1-195) Li 24.6 81 0.0059 20.9 5.7 16 63-78 64-79 (195)
41 d1v4aa2 d.218.1.9 (A:2-286) Gl 24.0 30 0.0022 27.0 3.6 37 65-105 171-208 (285)
42 d1dbwa_ c.23.1.1 (A:) Transcri 23.8 26 0.0019 23.1 2.8 68 14-127 19-87 (123)
43 d1w25a1 c.23.1.1 (A:2-140) Res 23.7 34 0.0025 22.8 3.5 42 13-78 16-57 (139)
44 d1xvla1 c.92.2.2 (A:49-327) Mn 23.6 18 0.0013 27.1 2.2 56 6-75 8-63 (279)
45 d2j13a1 c.6.2.3 (A:1-235) Puta 23.2 56 0.0041 23.8 5.0 72 11-104 149-220 (235)
46 d2go7a1 c.108.1.6 (A:3-206) Hy 22.9 36 0.0026 22.8 3.5 57 2-59 98-155 (204)
47 d1zesa1 c.23.1.1 (A:3-123) Pho 22.5 23 0.0017 23.1 2.3 42 14-79 16-57 (121)
48 d2piia_ d.58.5.1 (A:) PII (pro 22.2 1E+02 0.0075 20.3 6.5 29 92-120 67-95 (112)
49 d1toaa_ c.92.2.2 (A:) Periplas 22.0 20 0.0015 26.6 2.1 55 6-73 4-58 (277)
50 d1xhfa1 c.23.1.1 (A:2-122) Aer 21.1 21 0.0015 23.5 1.9 42 13-78 17-58 (121)
51 d1s8na_ c.23.1.1 (A:) Probable 21.0 36 0.0026 23.6 3.2 51 47-128 37-88 (190)
52 d1atza_ c.62.1.1 (A:) von Will 21.0 41 0.003 23.2 3.6 74 66-152 2-75 (184)
53 d1swva_ c.108.1.3 (A:) Phospho 20.9 39 0.0029 23.5 3.5 57 2-58 115-173 (257)
54 d1efaa1 a.35.1.5 (A:2-60) Lac 20.8 16 0.0012 22.6 1.1 46 12-58 3-48 (59)
55 d1peya_ c.23.1.1 (A:) Sporulat 20.7 20 0.0015 23.5 1.7 69 13-127 16-85 (119)
56 d1qpza1 a.35.1.5 (A:2-58) Puri 20.7 11 0.00082 23.2 0.3 46 13-59 2-47 (57)
57 d1ny1a_ c.6.2.3 (A:) Probable 20.6 1.1E+02 0.0083 22.1 6.3 73 11-105 147-219 (235)
58 d1qp8a1 c.2.1.4 (A:83-263) Put 20.2 69 0.005 22.7 4.8 49 16-81 59-107 (181)
No 1
>d2i09a1 c.76.1.5 (A:2-107,A:227-403) Phosphopentomutase DeoB {Streptococcus mutans [TaxId: 1309]}
Probab=74.39 E-value=1.5 Score=29.98 Aligned_cols=61 Identities=10% Similarity=0.062 Sum_probs=39.8
Q ss_pred ChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCc-CcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 030891 42 PIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKT-NDDKGKAVAHD-LEYINALVRVILQMAQP 108 (169)
Q Consensus 42 ~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a-~hdG~~~~k~d-iE~iD~lVg~im~~a~~ 108 (169)
.......++++.+- ....+..++++|....|.. .|......-.+ |+++|..||+|++..+.
T Consensus 148 ~~~~~~d~~~~~~~------~~~~~~~~~~~~~~~~d~~~~~~~~~~~y~~~i~~~D~~iG~il~~L~~ 210 (283)
T d2i09a1 148 SNSHGVDTLIKTMG------LSAFTKGFSFTNLVDFDALYGHRRNAHGYRDCLHEFDERLPEIIAAMKV 210 (283)
T ss_dssp SHHHHHHHHHHHHH------CSSCCSEEEEEEECHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred ccHHHHHHHHHHHH------hcCCCcceeecccCCcccccCcCccHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 33445666777761 1234567899998876654 33333333334 99999999999998765
No 2
>d2nqra3 c.57.1.2 (A:178-326) MoeA, central domain {Escherichia coli [TaxId: 562]}
Probab=70.79 E-value=1.2 Score=32.03 Aligned_cols=47 Identities=17% Similarity=0.253 Sum_probs=35.6
Q ss_pred ecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEE
Q 030891 9 TTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVH 73 (169)
Q Consensus 9 t~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlH 73 (169)
||.+.|+++.+..|++|....=+ . + +.+...+.+.+++ +++|+|+.-
T Consensus 27 sN~~~l~~~l~~~G~~v~~~~~v-~---D----d~~~i~~~l~~~~----------~~~Divitt 73 (149)
T d2nqra3 27 TNRLAVHLMLEQLGCEVINLGII-R---D----DPHALRAAFIEAD----------SQADVVISS 73 (149)
T ss_dssp CHHHHHHHHHHHTTCEEEEEEEE-C---S----SHHHHHHHHHHHH----------HHCSEEEEC
T ss_pred cchHHHHhhhhhcceEEEEcccc-C---C----hHHHHHHHHHhcc----------cccCEEEEc
Confidence 47788999999999999766544 1 2 5666666666777 788999984
No 3
>d2ftsa3 c.57.1.2 (A:499-653) Gephyrin, domain 5 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=66.32 E-value=1.6 Score=31.08 Aligned_cols=47 Identities=19% Similarity=0.263 Sum_probs=34.8
Q ss_pred ecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEE
Q 030891 9 TTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVH 73 (169)
Q Consensus 9 t~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlH 73 (169)
||.+.|.+..+.+|++|....=+ .+ +.+...+++.+++ +++|+|+.-
T Consensus 27 sN~~~l~~~l~~~G~~v~~~~~v----~D----d~~~i~~~l~~~~----------~~~Dliitt 73 (155)
T d2ftsa3 27 SNRSTLLATIQEHGYPTINLGIV----GD----NPDDLLNALNEGI----------SRADVIITS 73 (155)
T ss_dssp CHHHHHHHHHHTTTCCEEEEEEE----CS----SHHHHHHHHHHHH----------HHCSEEEEE
T ss_pred chHHHHHHHhcccccceEEEEEe----cC----chhHHHHHHHHhh----------cccCEEEEe
Confidence 56788999999999999654422 22 5666667777788 788998874
No 4
>d1y5ea1 c.57.1.1 (A:12-166) MoaB {Bacillus cereus [TaxId: 1396]}
Probab=64.46 E-value=4.3 Score=28.52 Aligned_cols=60 Identities=15% Similarity=0.261 Sum_probs=38.3
Q ss_pred CCceeEeecC-----------chhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEE
Q 030891 2 GLKAALITTN-----------SRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLV 70 (169)
Q Consensus 2 GmKAA~Vt~~-----------~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlV 70 (169)
.||+|+||-+ |.|...-+..|++|....=+ .+ +.+....++-+++ +.+.+|+|
T Consensus 2 ~~r~~vitvsd~~~~~~D~ngp~L~~~l~~~G~~v~~~~iv----~D----~~~~i~~~l~~~~--------~~~~~DlI 65 (155)
T d1y5ea1 2 EVRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIV----KD----DKESIQQAVLAGY--------HKEDVDVV 65 (155)
T ss_dssp CCEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEE----CS----SHHHHHHHHHHHH--------TCTTCSEE
T ss_pred eeEEEEEEEeCCCCCCcCccHHHHHHHHHhcCCEEEEeeee----cc----hHHHHHHHHHHHH--------hccCCCEE
Confidence 4788998843 57788888999999754332 11 4444444444444 34778999
Q ss_pred EEEeccC
Q 030891 71 LVHIGAG 77 (169)
Q Consensus 71 FlHI~a~ 77 (169)
+.=-+..
T Consensus 66 vTtGGts 72 (155)
T d1y5ea1 66 LTNGGTG 72 (155)
T ss_dssp EEECCCS
T ss_pred EEeeeee
Confidence 8765543
No 5
>d1wu2a3 c.57.1.2 (A:181-324) MoeA, central domain {Pyrococcus horikoshii, PH1647 [TaxId: 53953]}
Probab=60.47 E-value=1.8 Score=30.97 Aligned_cols=49 Identities=20% Similarity=0.205 Sum_probs=32.1
Q ss_pred ecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEec
Q 030891 9 TTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIG 75 (169)
Q Consensus 9 t~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~ 75 (169)
||.+.|.++.+++|+++....=+. + +.+...+.+-+++ +++|+|+.-=+
T Consensus 31 sN~~~L~~~l~~~G~~v~~~~iv~----D----d~~~i~~~l~~~~----------~~~DlvIttGG 79 (144)
T d1wu2a3 31 TNSIMLQGLVEKFFGEPILYGVLP----D----DESIIKETLEKAK----------NECDIVLITGG 79 (144)
T ss_dssp CHHHHHHHHHHHTTCEEEEEEEEC----S----CHHHHTTHHHHHH----------HCSEEEECC--
T ss_pred cCchHHhhhhcccCcceeEEEEec----c----hHHHHHHHHHHhh----------hcccEEEEccc
Confidence 456679999999999998765542 1 3444444444467 77899887443
No 6
>d2g2ca1 c.57.1.1 (A:1-163) Putative molybdenum cofactor biosynthesis protein DIP0503 {Corynebacterium diphtheriae [TaxId: 1717]}
Probab=58.58 E-value=3.1 Score=29.63 Aligned_cols=56 Identities=14% Similarity=0.211 Sum_probs=32.1
Q ss_pred CCCceeEeecCchhh-----------------hhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccc
Q 030891 1 MGLKAALITTNSRLK-----------------SFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEE 63 (169)
Q Consensus 1 MGmKAA~Vt~~~lik-----------------sfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~ 63 (169)
|.||+|+||-..-+. .-.+.+|++|.... ...+ +.+...+.+.+++
T Consensus 1 ~~~r~~iitigDe~~~G~~~D~~g~~~~~~L~~~l~~~G~~v~~~~----iv~D----~~~~i~~~~~~a~--------- 63 (163)
T d2g2ca1 1 MHIKSAIIVVSDRISTGTRENKALPLLQRLMSDELQDYSYELISEV----VVPE----GYDTVVEAIATAL--------- 63 (163)
T ss_dssp CEEEEEEEEECHHHHHTSSCCCHHHHHHHHHCC----CEEEEEEEE----EECS----SHHHHHHHHHHHH---------
T ss_pred CceEEEEEEeCCccccCccccCchHHHHHHHHHHHHhCCeEEEEEE----eecc----hHHHHHHHHHhhh---------
Confidence 889999999865442 11233477663322 2222 5566666666666
Q ss_pred cCcccEEEEE
Q 030891 64 VSQFDLVLVH 73 (169)
Q Consensus 64 ~s~fDlVFlH 73 (169)
.+.+|+|+.=
T Consensus 64 ~~~~DlVitt 73 (163)
T d2g2ca1 64 KQGARFIITA 73 (163)
T ss_dssp HTTCSEEEEE
T ss_pred ccCCCEEEec
Confidence 1348999874
No 7
>d1eyra_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Neisseria meningitidis [TaxId: 487]}
Probab=55.40 E-value=22 Score=24.35 Aligned_cols=75 Identities=9% Similarity=0.004 Sum_probs=53.7
Q ss_pred eEeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCC
Q 030891 6 ALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKG 85 (169)
Q Consensus 6 A~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~ 85 (169)
-+.|++..+..+++..|..++..+.-....++ ........+++.++ .++|.|.++-. +.
T Consensus 49 iv~td~~~i~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---------~~~d~ii~~~~-~~------- 107 (225)
T d1eyra_ 49 IVSTDGGLIAEEAKNFGVEVVLRPAELASDTA----SSISGVIHALETIG---------SNSGTVTLLQP-TS------- 107 (225)
T ss_dssp EEEESCHHHHHHHHHTTCEEEECCHHHHSTTC----CHHHHHHHHHHHHT---------CCSEEEEECCT-TC-------
T ss_pred EEeeccchhhhhhhhhcceeeeeccccccccc----cchhhccccccccc---------cccceEEEeec-cc-------
Confidence 35688888999999999998776655444344 56677788888884 45787765543 33
Q ss_pred cccccChHHHHHHHHHHH
Q 030891 86 KAVAHDLEYINALVRVIL 103 (169)
Q Consensus 86 ~~~k~diE~iD~lVg~im 103 (169)
+=.+.+.||+++..+.
T Consensus 108 --P~~~~~~I~~~i~~~~ 123 (225)
T d1eyra_ 108 --PLRTGAHIREAFSLFD 123 (225)
T ss_dssp --TTCCHHHHHHHHTTCC
T ss_pred --cccccccccccceeec
Confidence 5667899999987544
No 8
>d1uz5a3 c.57.1.2 (A:181-328) MoeA, central domain {Archaeon Pyrococcus horikoshii, PH0582 [TaxId: 53953]}
Probab=54.71 E-value=3.7 Score=29.12 Aligned_cols=50 Identities=16% Similarity=0.129 Sum_probs=33.8
Q ss_pred ecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEecc
Q 030891 9 TTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 76 (169)
Q Consensus 9 t~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a 76 (169)
||.+.|.++.+.+|++|....-. . + +.+...+.+-+++ +++|+|+.-=+.
T Consensus 27 sn~~~l~~~l~~~G~~v~~~~~v-~---D----d~~~i~~~i~~~~----------~~~DliIttGG~ 76 (148)
T d1uz5a3 27 INGRALCDAINELGGEGIFMGVA-R---D----DKESLKALIEKAV----------NVGDVVVISGGA 76 (148)
T ss_dssp CHHHHHHHHHHHHTSEEEEEEEE-C---S----SHHHHHHHHHHHH----------HHCSEEEEECCC
T ss_pred CChHHHHHhhhcccccceeeeee-c---c----HHHHHHHHHHhhh----------ccccEEEECCCc
Confidence 56778999999999999765533 2 1 4444544444577 778988775443
No 9
>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=50.09 E-value=11 Score=25.36 Aligned_cols=43 Identities=21% Similarity=0.323 Sum_probs=29.9
Q ss_pred hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCC
Q 030891 13 RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK 79 (169)
Q Consensus 13 liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~ 79 (169)
.++.+-...|+.|..... +.+|++++ ...+||+||+-+..++-
T Consensus 23 ~l~~~L~~~g~~v~~a~~----------------g~ea~~~~--------~~~~~dlillD~~mP~~ 65 (133)
T d2ayxa1 23 LLADQLGSLGYQCKTAND----------------GVDALNVL--------SKNHIDIVLSDVNMPNM 65 (133)
T ss_dssp HHHHHHHHHTSEEEEECC----------------SHHHHHHH--------HHSCCSEEEEEESSCSS
T ss_pred HHHHHHHHcCCEEEEECc----------------HHHHHHHH--------hccCceEEEEeccCCCC
Confidence 355666778998854322 13566776 45789999999999863
No 10
>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=49.69 E-value=9.4 Score=25.82 Aligned_cols=53 Identities=19% Similarity=0.305 Sum_probs=36.5
Q ss_pred CCceeEeecCch----hhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccC
Q 030891 2 GLKAALITTNSR----LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAG 77 (169)
Q Consensus 2 GmKAA~Vt~~~l----iksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~ 77 (169)
|+|--+|=+++. ++.+-+.+|++|..+.. ..+|++++. ++||+||+=+.++
T Consensus 7 g~rILvVDD~~~~~~~l~~~L~~~G~~v~~a~~----------------g~eal~~l~---------~~~dlillD~~mP 61 (134)
T d1dcfa_ 7 GLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSS----------------NEECLRVVS---------HEHKVVFMDVCMP 61 (134)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCEEEEESS----------------HHHHHHHCC---------TTCSEEEEECCSS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECC----------------HHHHHHHhh---------cCCCeEEEEeccC
Confidence 566666655554 55666778998854322 357778772 5799999999988
Q ss_pred CC
Q 030891 78 EK 79 (169)
Q Consensus 78 d~ 79 (169)
+-
T Consensus 62 ~~ 63 (134)
T d1dcfa_ 62 GV 63 (134)
T ss_dssp TT
T ss_pred CC
Confidence 63
No 11
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=43.14 E-value=18 Score=23.80 Aligned_cols=43 Identities=19% Similarity=0.185 Sum_probs=30.3
Q ss_pred hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCC
Q 030891 13 RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK 79 (169)
Q Consensus 13 liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~ 79 (169)
.++.+-+..|++|..... ..++++++ ...+||+|++-+..++.
T Consensus 18 ~l~~~L~~~g~~v~~a~~----------------~~~a~~~l--------~~~~~dlii~D~~mp~~ 60 (123)
T d1krwa_ 18 VLERALAGAGLTCTTFEN----------------GNEVLAAL--------ASKTPDVLLSDIRMPGM 60 (123)
T ss_dssp HHHHHHHHTTCEEEEESS----------------SHHHHHHH--------TTCCCSEEEECCSSSSS
T ss_pred HHHHHHHHCCCEEEEeCC----------------HHHHHHHH--------HhCCCCEEEehhhcCCc
Confidence 455666677999854432 24677777 44689999999998863
No 12
>d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.89 E-value=46 Score=22.75 Aligned_cols=75 Identities=12% Similarity=0.091 Sum_probs=50.0
Q ss_pred EeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCc
Q 030891 7 LITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 86 (169)
Q Consensus 7 ~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~ 86 (169)
+.|++..+..++.+.|..++..+.-..+... .....+.++++.+ +.+|.+++.- ++.
T Consensus 49 vstd~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~----------~~~~~iv~~~-~~~-------- 105 (228)
T d1qwja_ 49 VSTDHDEIENVAKQFGAQVHRRSSETSKDSS----TSLDAIVEFLNYH----------NEVDIVGNIQ-ATS-------- 105 (228)
T ss_dssp EEESCHHHHHHHHHTTCEEEECCGGGSSTTC----CHHHHHHHHHTTC----------TTCSEEEEEC-TTC--------
T ss_pred EecchhhhhhhhhhcCccccccccccccccc----hhhhhhhhccccc----------cccceeeeec-ccc--------
Confidence 5677889999999999888765553322222 3445566666665 5677765543 333
Q ss_pred ccccChHHHHHHHHHHHHh
Q 030891 87 AVAHDLEYINALVRVILQM 105 (169)
Q Consensus 87 ~~k~diE~iD~lVg~im~~ 105 (169)
.=.+.+.||+++..+.+.
T Consensus 106 -P~~~~~~I~~~i~~~~~~ 123 (228)
T d1qwja_ 106 -PCLHPTDLQKVAEMIREE 123 (228)
T ss_dssp -TTCCHHHHHHHHHHHHSS
T ss_pred -cccCchhhhhhhhhhhcc
Confidence 445688999999877653
No 13
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=41.05 E-value=7.1 Score=26.51 Aligned_cols=43 Identities=21% Similarity=0.285 Sum_probs=30.5
Q ss_pred hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCC
Q 030891 13 RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK 79 (169)
Q Consensus 13 liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~ 79 (169)
.++.+-+..||+|..... +.+|+++| ...+||+|++.+..++.
T Consensus 15 ~l~~~L~~~g~~v~~a~~----------------~~eAl~~l--------~~~~~dlvilD~~mp~~ 57 (137)
T d1ny5a1 15 LLEEYLSMKGIKVESAER----------------GKEAYKLL--------SEKHFNVVLLDLLLPDV 57 (137)
T ss_dssp HHHHHHHHHTCEEEEESS----------------HHHHHHHH--------HHSCCSEEEEESBCSSS
T ss_pred HHHHHHHHCCCEEEEECC----------------HHHHHHHh--------hccccccchHHHhhhhh
Confidence 455666677999854321 35778887 34679999999988863
No 14
>d2d8za2 g.39.1.3 (A:33-64) Four and a half LIM domains protein 2, FHL2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.45 E-value=3.6 Score=23.61 Aligned_cols=11 Identities=18% Similarity=0.365 Sum_probs=9.7
Q ss_pred cceeeccCCcc
Q 030891 154 RQSYTMKGETP 164 (169)
Q Consensus 154 rQSYtmkgg~~ 164 (169)
-|.||||-|+|
T Consensus 11 GQry~~rd~~P 21 (32)
T d2d8za2 11 GQRFTARDDFA 21 (32)
T ss_dssp TSCCEESSSSE
T ss_pred CceeeecCCCe
Confidence 38999999988
No 15
>d1xfka_ c.42.1.1 (A:) Formimidoylglutamase HutG {Vibrio cholerae [TaxId: 666]}
Probab=39.70 E-value=17 Score=28.24 Aligned_cols=51 Identities=16% Similarity=0.204 Sum_probs=40.0
Q ss_pred cCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccC
Q 030891 10 TNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAG 77 (169)
Q Consensus 10 ~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~ 77 (169)
+.+...-+.++.|+.+++.+++... ..+..++++.+.+ ++.|-|+||+..+
T Consensus 197 ~~~~~~~~~~~~g~~~~~~~~~~~~-------g~~~~~~~~~~~l----------~~~~~vylS~DiD 247 (324)
T d1xfka_ 197 NTPALFERADKLGVWYVEDKAFSPL-------SLKDHLTQLQHFI----------DDCDYLYLTIDLD 247 (324)
T ss_dssp SCHHHHHHHHHTTCEEEEGGGCSTT-------THHHHHHHHHHHH----------HTCSEEEEEEEGG
T ss_pred CCHHHHHHHHhcCceEEEHHHHhhh-------hhHHHHhhhHhhh----------ccCCceEEEEecc
Confidence 3445566789999999999988653 5677888888888 7789999997654
No 16
>d1n3ya_ c.62.1.1 (A:) Integrin alpha-x beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.31 E-value=16 Score=25.23 Aligned_cols=56 Identities=11% Similarity=0.180 Sum_probs=29.8
Q ss_pred hHHHHHHHHHHHHhcCCcccccceeEEEEEEeeccccccCCCcceeeeecccccccccccccc
Q 030891 92 LEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPR 154 (169)
Q Consensus 92 iE~iD~lVg~im~~a~~gs~i~srlhlsvvlsYG~~~~~~~~~~~v~~~~~e~~s~l~~L~Pr 154 (169)
++++=..+..+++.-.++ +.|++|| +|++-..-. ..|.-..+.++....+..+.+.
T Consensus 20 ~~~~k~~~~~~i~~l~~~-----~~rv~vv-~fs~~~~~~-~~l~~~~~~~~~~~~i~~~~~~ 75 (189)
T d1n3ya_ 20 FATMMNFVRAVISQFQRP-----STQFSLM-QFSNKFQTH-FTFEEFRRSSNPLSLLASVHQL 75 (189)
T ss_dssp HHHHHHHHHHHHTTSCTT-----TEEEEEE-EESSSEEEE-ECHHHHHHCSSGGGGGTTCCCC
T ss_pred HHHHHHHHHHHHHHhCCC-----CCEEEEE-Eeeccceee-ccccccccHHHHHHHHHhhhhh
Confidence 444445556666665443 5688876 787655431 1232223455555666655443
No 17
>d1mkza_ c.57.1.1 (A:) MoaB {Escherichia coli [TaxId: 562]}
Probab=37.98 E-value=28 Score=24.65 Aligned_cols=58 Identities=12% Similarity=0.292 Sum_probs=35.9
Q ss_pred CceeEeecCc-----------hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEE
Q 030891 3 LKAALITTNS-----------RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVL 71 (169)
Q Consensus 3 mKAA~Vt~~~-----------liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVF 71 (169)
+|.|+||-+. .|.+..+..|++|... +.+. . +.+.....+.+++ ....+|+|+
T Consensus 9 ~rvaiitvsD~~g~~~D~nGp~L~~~l~~~G~~v~~~-~iv~---D----d~~~~~~~l~~~~--------~~~~~dlIi 72 (170)
T d1mkza_ 9 TRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDK-AIVK---E----NRYAIRAQVSAWI--------ASDDVQVVL 72 (170)
T ss_dssp CEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEE-EEEC---S----CHHHHHHHHHHHH--------HSSSCCEEE
T ss_pred ceEEEEEEcCCCCcCCCChHHHHHHHHHHCCCEEEEe-eeeC---C----CHHHHHHHHHhhh--------hcccceEEE
Confidence 5778887543 7888899999999653 2222 1 4455555555444 346688876
Q ss_pred EEeccC
Q 030891 72 VHIGAG 77 (169)
Q Consensus 72 lHI~a~ 77 (169)
-= +++
T Consensus 73 Tt-GGt 77 (170)
T d1mkza_ 73 IT-GGT 77 (170)
T ss_dssp EE-SCC
T ss_pred Ee-eee
Confidence 53 444
No 18
>d1k7ha_ c.76.1.1 (A:) Alkaline phosphatase {Northern shrimp (Pandalus borealis) [TaxId: 6703]}
Probab=36.81 E-value=8.4 Score=32.40 Aligned_cols=62 Identities=15% Similarity=0.231 Sum_probs=47.7
Q ss_pred CCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 030891 40 GSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP 108 (169)
Q Consensus 40 ~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~~ 108 (169)
.|....+.++||++|. ...+-| |++|==+.-|.++|+.+...-+. +..+|++|+.+++-++.
T Consensus 284 ~PsL~eMt~~AL~~L~------~n~~GF-fLmVEgg~ID~a~H~nd~~~~i~e~~~fD~AV~~a~~~~~~ 346 (476)
T d1k7ha_ 284 DPTLPEMTKVAIEMLT------KDENGF-FLLVEGGRIDHMHHANQIRQSLAETLDMEEAVSMALSMTDP 346 (476)
T ss_dssp SCCHHHHHHHHHHHHT------TCTTCE-EEEEEECHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred CCCHHHHHHHHHHHhc------cCCCce-EEEEecccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4578899999999992 111112 55555566789999999988888 99999999999998753
No 19
>d2d00a1 c.149.1.1 (A:6-109) V-type ATP synthase subunit F, AtpF {Thermus thermophilus [TaxId: 274]}
Probab=36.68 E-value=26 Score=23.26 Aligned_cols=51 Identities=24% Similarity=0.281 Sum_probs=34.8
Q ss_pred eEeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHH-HHhccccCcccccCcccEEEEEeccCC
Q 030891 6 ALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELL-KLLGLQRGKMEEVSQFDLVLVHIGAGE 78 (169)
Q Consensus 6 A~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al-~LLGf~egk~~~~s~fDlVFlHI~a~d 78 (169)
|+|.+...+.|| +.+|++++.+. +.+ .+.+++ +++ ..++|-.||++=...+
T Consensus 2 aViGd~dtv~GF-rLaGi~~~~v~------------~~e-e~~~~l~~l~--------~~~d~gII~Ite~~~~ 53 (104)
T d2d00a1 2 AVIADPETAQGF-RLAGLEGYGAS------------SAE-EAQSLLETLV--------ERGGYALVAVDEALLP 53 (104)
T ss_dssp EEEECHHHHHHH-HHTTSEEEECS------------SHH-HHHHHHHHHH--------HHCCCSEEEEETTTCS
T ss_pred EEEcCHHHHHHH-HHcCCeeecCC------------CHH-HHHHHHHHHH--------hCCCeEEEEEcHHHHH
Confidence 678888889998 78999887542 233 334444 444 4478999999876443
No 20
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=35.03 E-value=8.1 Score=25.49 Aligned_cols=43 Identities=19% Similarity=0.265 Sum_probs=30.1
Q ss_pred hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCC
Q 030891 13 RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK 79 (169)
Q Consensus 13 liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~ 79 (169)
.++..-+..||+|..... +.++++++ ...+||+|++=+..++.
T Consensus 17 ~l~~~L~~~g~~v~~a~~----------------~~~al~~l--------~~~~~dlillD~~mp~~ 59 (121)
T d1mvoa_ 17 LLQYNLERSGYDVITASD----------------GEEALKKA--------ETEKPDLIVLDVMLPKL 59 (121)
T ss_dssp HHHHHHHHTTCEEEEESS----------------HHHHHHHH--------HHHCCSEEEEESSCSSS
T ss_pred HHHHHHHHCCCEEEEECC----------------HHHHHHHH--------hcccccEEEecccccCC
Confidence 345555677999865432 34677777 44689999999998863
No 21
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=34.73 E-value=37 Score=25.05 Aligned_cols=59 Identities=19% Similarity=0.348 Sum_probs=39.0
Q ss_pred CCceeEeec-------CchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEe
Q 030891 2 GLKAALITT-------NSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHI 74 (169)
Q Consensus 2 GmKAA~Vt~-------~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI 74 (169)
|-|-++||. ..+++.+|+.+|..++..+.- .+....+.+.+... ..++||+||+=.
T Consensus 34 g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~---------~d~~~~~~~~~~~~--------~~~~~d~ilIDT 96 (207)
T d1okkd2 34 GKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEG---------TDPAALAYDAVQAM--------KARGYDLLFVDT 96 (207)
T ss_dssp TCCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTT---------CCHHHHHHHHHHHH--------HHHTCSEEEECC
T ss_pred CCcEEEEEeccccccchhhHhhcccccCceEEeccCC---------ccHHHHHHHHHHHH--------HHCCCCEEEcCc
Confidence 345555553 468999999999998765432 24555666555443 226789999977
Q ss_pred ccC
Q 030891 75 GAG 77 (169)
Q Consensus 75 ~a~ 77 (169)
.+-
T Consensus 97 aGr 99 (207)
T d1okkd2 97 AGR 99 (207)
T ss_dssp CCC
T ss_pred ccc
Confidence 654
No 22
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=34.45 E-value=68 Score=23.41 Aligned_cols=104 Identities=17% Similarity=0.223 Sum_probs=58.3
Q ss_pred cCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccc
Q 030891 10 TNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVA 89 (169)
Q Consensus 10 ~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k 89 (169)
+..+++.+|+.+|..+.....- .+....+..+..+. ..+.+|+||+=..+- . .
T Consensus 53 A~eQL~~~a~~l~v~~~~~~~~---------~~~~~~~~~~~~~~--------~~~~~d~vlIDTaGr-----~-----~ 105 (207)
T d1ls1a2 53 AREQLRLLGEKVGVPVLEVMDG---------ESPESIRRRVEEKA--------RLEARDLILVDTAGR-----L-----Q 105 (207)
T ss_dssp HHHHHHHHHHHHTCCEEECCTT---------CCHHHHHHHHHHHH--------HHHTCCEEEEECCCC-----S-----S
T ss_pred HHHHHHHHHHhcCCcccccccc---------chhhHHHHHHHHHH--------hhccCcceeeccccc-----c-----h
Confidence 3568899999999988655432 14555666665543 227889999944432 2 2
Q ss_pred cChHHHHHHHHHHHHhcCCcccccceeEEEEEEeeccccccC--------CCcceeeeecccccc
Q 030891 90 HDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEAD--------NSNLSVLISIDEKSS 146 (169)
Q Consensus 90 ~diE~iD~lVg~im~~a~~gs~i~srlhlsvvlsYG~~~~~~--------~~~~~v~~~~~e~~s 146 (169)
.|.+.+..|. .+.+..+| -..||++=..-|.-..+. ...-.|++.-||...
T Consensus 106 ~d~~~~~el~-~~~~~~~~-----~~~llv~~a~~~~~~~~~~~~f~~~~~~~~~I~TKlDe~~~ 164 (207)
T d1ls1a2 106 IDEPLMGELA-RLKEVLGP-----DEVLLVLDAMTGQEALSVARAFDEKVGVTGLVLTKLDGDAR 164 (207)
T ss_dssp CCHHHHHHHH-HHHHHHCC-----SEEEEEEEGGGTHHHHHHHHHHHHHTCCCEEEEECGGGCSS
T ss_pred hhhhhHHHHH-HHHhhcCC-----ceEEEEeccccchhHHHHHHHHHhhCCCCeeEEeecCcccc
Confidence 3456665553 45555554 245555544444322110 112237777777644
No 23
>d1jlja_ c.57.1.1 (A:) Gephyrin N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.78 E-value=14 Score=25.80 Aligned_cols=55 Identities=16% Similarity=0.315 Sum_probs=33.1
Q ss_pred CCceeEeec-------------Cchhhhhhhh---hcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccC
Q 030891 2 GLKAALITT-------------NSRLKSFGDK---LGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVS 65 (169)
Q Consensus 2 GmKAA~Vt~-------------~~liksfg~~---lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s 65 (169)
.||+++||- .+.|....+. +|++|....=. .+ +.+.....+.+++ ..+
T Consensus 2 ~~rv~iit~gDe~~~G~~~D~ng~~L~~~l~~~~~~G~~v~~~~iV----~D----d~~~i~~al~~~~--------~~~ 65 (169)
T d1jlja_ 2 QIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIV----PD----EIEEIKETLIDWC--------DEK 65 (169)
T ss_dssp CCEEEEEEECHHHHTTSSCCHHHHHHHHHHHCTTTTCCEEEEEEEE----CS----CHHHHHHHHHHHH--------HTS
T ss_pred ceEEEEEEeCCCcccCCcCCccHHHHHHHHHhhccCCcEEEEEEEe----cc----chhhHHHHHHHHh--------hcc
Confidence 478888854 3455555555 59998664422 12 4455555555654 336
Q ss_pred cccEEEE
Q 030891 66 QFDLVLV 72 (169)
Q Consensus 66 ~fDlVFl 72 (169)
++|+||.
T Consensus 66 ~~D~ViT 72 (169)
T d1jlja_ 66 ELNLILT 72 (169)
T ss_dssp CCSEEEE
T ss_pred cccEEEE
Confidence 7999985
No 24
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=31.88 E-value=21 Score=23.25 Aligned_cols=43 Identities=26% Similarity=0.330 Sum_probs=30.2
Q ss_pred hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCC
Q 030891 13 RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK 79 (169)
Q Consensus 13 liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~ 79 (169)
.++.+-...|++|.+... +.+|++++ ...+||+|++-+.+.+.
T Consensus 16 ~l~~~L~~~g~~v~~a~~----------------~~~al~~~--------~~~~~dlil~D~~mp~~ 58 (123)
T d1mb3a_ 16 LFHDLLEAQGYETLQTRE----------------GLSALSIA--------RENKPDLILMDIQLPEI 58 (123)
T ss_dssp HHHHHHHHTTCEEEEESC----------------HHHHHHHH--------HHHCCSEEEEESBCSSS
T ss_pred HHHHHHHHCCCEEEEECC----------------HHHHHHHH--------HhCCCCEEEEEeccCCC
Confidence 455566778998865422 25667777 34679999999998863
No 25
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=30.42 E-value=66 Score=23.83 Aligned_cols=49 Identities=8% Similarity=0.203 Sum_probs=32.8
Q ss_pred CchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEecc
Q 030891 11 NSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 76 (169)
Q Consensus 11 ~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a 76 (169)
..+++.+|+.+|..++..+.- .+....+.++++.. ....||+||+=..+
T Consensus 53 ~eQL~~~a~~l~v~~~~~~~~---------~d~~~~l~~~~~~a--------~~~~~d~ilIDTaG 101 (211)
T d2qy9a2 53 VEQLQVWGQRNNIPVIAQHTG---------ADSASVIFDAIQAA--------KARNIDVLIADTAG 101 (211)
T ss_dssp HHHHHHHHHHTTCCEECCSTT---------CCHHHHHHHHHHHH--------HHTTCSEEEECCCC
T ss_pred hhhhhhhhhhcCCcccccccC---------CCHHHHHHHHHHHH--------HHcCCCEEEeccCC
Confidence 568999999999988644321 14455566665543 12679999996654
No 26
>d1zeda1 c.76.1.1 (A:1-479) Alkaline phosphatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.16 E-value=15 Score=31.04 Aligned_cols=63 Identities=13% Similarity=0.151 Sum_probs=48.7
Q ss_pred CCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 030891 40 GSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQPA 109 (169)
Q Consensus 40 ~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~~g 109 (169)
.|....++++||++|. ...+-| |++|==+.-|.+.|..+....+. +-.+|++|+.+++-+...
T Consensus 285 ~PsL~eMt~~AL~~L~------~n~~GF-fLmVEgg~ID~a~H~nd~~~~i~E~~~fd~AV~~a~~~~~~~ 348 (479)
T d1zeda1 285 DPSLMEMTEAALRLLS------RNPRGF-FLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTSEE 348 (479)
T ss_dssp CCCHHHHHHHHHHHHT------TCTTCE-EEEEEETTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred CCcHHHHHHHHHHHHh------cCCCCe-EEEEeecccccccccccHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4688899999999993 111223 55555556789999999988888 899999999999998653
No 27
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}
Probab=28.82 E-value=13 Score=24.59 Aligned_cols=42 Identities=21% Similarity=0.204 Sum_probs=29.1
Q ss_pred hhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCC
Q 030891 14 LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK 79 (169)
Q Consensus 14 iksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~ 79 (169)
++.+=+..|++|..... .++|++++ ...+||+|++-+..++-
T Consensus 16 l~~~L~~~G~~v~~a~~----------------g~eal~~l--------~~~~~dliilD~~mP~~ 57 (119)
T d2pl1a1 16 LKVQIQDAGHQVDDAED----------------AKEADYYL--------NEHIPDIAIVDLGLPDE 57 (119)
T ss_dssp HHHHHHHTTCEEEEESS----------------HHHHHHHH--------HHSCCSEEEECSCCSSS
T ss_pred HHHHHHHCCCEEEEECC----------------HHHHHHHH--------HhcccceeehhccCCCc
Confidence 44445567888854322 35677777 45789999999998863
No 28
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=28.77 E-value=1e+02 Score=22.57 Aligned_cols=95 Identities=17% Similarity=0.267 Sum_probs=55.5
Q ss_pred CCceeEeec-------CchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEe
Q 030891 2 GLKAALITT-------NSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHI 74 (169)
Q Consensus 2 GmKAA~Vt~-------~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI 74 (169)
|.|-++||. ..+++.+|+.+|..++..+.- .+....+.+++.+. ...++|+||+=.
T Consensus 40 g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~---------~~~~~~~~~a~~~~--------~~~~~d~IlIDT 102 (211)
T d1j8yf2 40 GFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGE---------KDVVGIAKRGVEKF--------LSEKMEIIIVDT 102 (211)
T ss_dssp TCCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTC---------CCHHHHHHHHHHHH--------HHTTCSEEEEEC
T ss_pred CCceEEEEeeccccchhHHHHHhccccCcceeecccc---------hhhhHHHHHHHHHh--------hccCCceEEEec
Confidence 556677765 478999999999998643321 24455666666654 226789999976
Q ss_pred ccCCCcCcCCCcccccChHHHHHHHHHHHHhcCCcccccceeEEEEEEeeccc
Q 030891 75 GAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQV 127 (169)
Q Consensus 75 ~a~d~a~hdG~~~~k~diE~iD~lVg~im~~a~~gs~i~srlhlsvvlsYG~~ 127 (169)
.+-.. .| +....++.+.++. +..+| -..||++-.+.|.-
T Consensus 103 aGr~~--~~---~~~~~~~el~~~~----~~~~~-----~~~~LVl~a~~~~~ 141 (211)
T d1j8yf2 103 AGRHG--YG---EEAALLEEMKNIY----EAIKP-----DEVTLVIDASIGQK 141 (211)
T ss_dssp CCSCC--TT---CHHHHHHHHHHHH----HHHCC-----SEEEEEEEGGGGGG
T ss_pred CCcCc--cc---hhhHHHHHHHHHH----hhcCC-----ceEEEEEecccCcc
Confidence 54321 00 0011133333333 33333 25788887777753
No 29
>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=28.36 E-value=24 Score=23.02 Aligned_cols=42 Identities=14% Similarity=0.187 Sum_probs=29.7
Q ss_pred hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCC
Q 030891 13 RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGE 78 (169)
Q Consensus 13 liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d 78 (169)
.++.+-+..|++|..... ..+|++++ ...+||+|++=+.+++
T Consensus 15 ~l~~~L~~~g~~v~~a~~----------------~~eal~~l--------~~~~~dliilD~~mP~ 56 (119)
T d1zh2a1 15 FLRTALEGDGMRVFEAET----------------LQRGLLEA--------ATRKPDLIILDLGLPD 56 (119)
T ss_dssp HHHHHHHTTTCEEEEESS----------------HHHHHHHH--------HHHCCSEEEEESEETT
T ss_pred HHHHHHHHCCCEEEEeCC----------------HHHHHHHH--------HhcCCCEEEeccccCC
Confidence 345555677888865422 34677777 4478999999999986
No 30
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.46 E-value=46 Score=24.32 Aligned_cols=83 Identities=16% Similarity=0.153 Sum_probs=47.9
Q ss_pred CCceeEeecCchh------hhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEec
Q 030891 2 GLKAALITTNSRL------KSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIG 75 (169)
Q Consensus 2 GmKAA~Vt~~~li------ksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~ 75 (169)
|++=|+||+.+.= +.|++.-|.+|+-. . -...+.+++.+.|.- ...+..+++..
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~----~--------r~~~~~~~~~~~l~~--------~~~~~~~~~~D 61 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLT----A--------RDVTRGQAAVQQLQA--------EGLSPRFHQLD 61 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEE----E--------SSHHHHHHHHHHHHH--------TTCCCEEEECC
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEE----E--------CCHHHHHHHHHHHHh--------cCCcEEEEEEe
Confidence 7889999987642 23333347777532 1 123456666666621 11233444443
Q ss_pred cCCCcCcCCCcccccChHHHHHHHHHHHHhcCCcccccceeEEEEEEeec
Q 030891 76 AGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYG 125 (169)
Q Consensus 76 a~d~a~hdG~~~~k~diE~iD~lVg~im~~a~~gs~i~srlhlsvvlsYG 125 (169)
-+ |.+-+.+++..+.+. ..||++ ||-.=|
T Consensus 62 vs-------------~~~sv~~~~~~~~~~-------~g~iDi-LVnNAG 90 (275)
T d1wmaa1 62 ID-------------DLQSIRALRDFLRKE-------YGGLDV-LVNNAG 90 (275)
T ss_dssp TT-------------CHHHHHHHHHHHHHH-------HSSEEE-EEECCC
T ss_pred cC-------------CHHHHHHHHHHHHHh-------cCCcEE-EEEcCC
Confidence 33 467788888888775 468885 555444
No 31
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=26.10 E-value=43 Score=21.83 Aligned_cols=70 Identities=13% Similarity=0.216 Sum_probs=43.5
Q ss_pred hhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-h
Q 030891 14 LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-L 92 (169)
Q Consensus 14 iksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d-i 92 (169)
+..+=...|+.|.+... +.++++++ ...+||+|++=+.+.+. + +
T Consensus 18 l~~~L~~~g~~v~~a~~----------------~~~al~~~--------~~~~~dliilD~~mp~~-----------~G~ 62 (128)
T d1yioa2 18 LRNLLRSAGFEVETFDC----------------ASTFLEHR--------RPEQHGCLVLDMRMPGM-----------SGI 62 (128)
T ss_dssp HHHHHHTTTCEEEEESS----------------HHHHHHHC--------CTTSCEEEEEESCCSSS-----------CHH
T ss_pred HHHHHHHcCCCcccccc----------------HHHHHHHH--------HhcCCCEeehhhhcccc-----------hhH
Confidence 44455566888854332 46788888 45789999999998863 2 4
Q ss_pred HHHHHHHHHHHHhcCCcccccceeEEEEEEeeccccc
Q 030891 93 EYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLE 129 (169)
Q Consensus 93 E~iD~lVg~im~~a~~gs~i~srlhlsvvlsYG~~~~ 129 (169)
+.+- .+... ....++.++.+|++...
T Consensus 63 ~~~~----~i~~~-------~~~~~ii~lt~~~~~~~ 88 (128)
T d1yioa2 63 ELQE----QLTAI-------SDGIPIVFITAHGDIPM 88 (128)
T ss_dssp HHHH----HHHHT-------TCCCCEEEEESCTTSCC
T ss_pred HHHH----HHHhh-------CCCCeEEEEEEECCHHH
Confidence 4433 22222 23456677778876443
No 32
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=25.97 E-value=26 Score=22.78 Aligned_cols=42 Identities=21% Similarity=0.252 Sum_probs=29.2
Q ss_pred hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCC
Q 030891 13 RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGE 78 (169)
Q Consensus 13 liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d 78 (169)
.++.+=+..|++|..... ..+|++++ ...+||+|++=+..++
T Consensus 15 ~l~~~L~~~g~~v~~a~~----------------~~eal~~~--------~~~~~dlillD~~mp~ 56 (117)
T d2a9pa1 15 IIKFNMTKEGYEVVTAFN----------------GREALEQF--------EAEQPDIIILDLMLPE 56 (117)
T ss_dssp HHHHHHHHTTCEEEEESS----------------HHHHHHHH--------HHHCCSEEEECSSCSS
T ss_pred HHHHHHHHCCCEEEEECC----------------HHHHHHHH--------HhcCCCEEEeccccCC
Confidence 345555677998854422 24667777 4478999999998876
No 33
>g1sc3.1 c.17.1.1 (A:,B:) Interleukin-1beta converting enzyme (a cysteine protease) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.44 E-value=21 Score=26.33 Aligned_cols=48 Identities=10% Similarity=0.101 Sum_probs=27.7
Q ss_pred hhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEecc
Q 030891 14 LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 76 (169)
Q Consensus 14 iksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a 76 (169)
|+.+=+.+||+|....+++.. ....+..++.+.+ +...+|.+|+.+-+
T Consensus 65 l~~~l~~lGF~V~~~~nlt~~-------e~~~~l~~~~~~~--------~~~~~d~~v~~~~g 112 (261)
T g1sc3.1 65 MTMLLQNLGYSVDVKKNLTAS-------DMTTELEAFAHRP--------EHKTSDSTFLVFMS 112 (261)
T ss_dssp HHHHHHHTTCEEEEEESCCHH-------HHHHHHHHHHTCG--------GGGGCSCEEEEEES
T ss_pred HHHHHHHCCCEEEEeeCCCHH-------HHHHHHHHHhhHh--------hcCCCCEEEEEEec
Confidence 444558899999888777553 2222222222222 33567877777654
No 34
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=25.35 E-value=18 Score=23.68 Aligned_cols=42 Identities=17% Similarity=0.091 Sum_probs=28.6
Q ss_pred hhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCC
Q 030891 14 LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK 79 (169)
Q Consensus 14 iksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~ 79 (169)
++.+=+..||+|..... +.++++++ ...+||+|++=+.+++.
T Consensus 17 l~~~L~~~g~~v~~a~~----------------~~~al~~l--------~~~~~dlillD~~mp~~ 58 (122)
T d1kgsa2 17 ITEALKKEMFTVDVCYD----------------GEEGMYMA--------LNEPFDVVILDIMLPVH 58 (122)
T ss_dssp HHHHHHHTTCEEEEESS----------------HHHHHHHH--------HHSCCSEEEEESCCSSS
T ss_pred HHHHHHHCCCEEEEEcc----------------hHHHHHHH--------HhhCccccccccccccc
Confidence 34444566998854322 34567777 45789999999998863
No 35
>g1pyo.1 c.17.1.1 (A:,B:) Caspase-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.21 E-value=24 Score=26.12 Aligned_cols=48 Identities=15% Similarity=0.122 Sum_probs=29.4
Q ss_pred hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEec
Q 030891 13 RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIG 75 (169)
Q Consensus 13 liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~ 75 (169)
.|..+=+.|||+|....+++.. ....+.+++.+.+ +.+.+|.+|+-+-
T Consensus 55 ~l~~~l~~lGF~V~~~~nlt~~-------em~~~l~~f~~~~--------~~~~~~~~~~~~~ 102 (257)
T g1pyo.1 55 TLVTLFKLLGYDVHVLCDQTAQ-------EMQEKLQNFAQLP--------AHRVTDSCIVALL 102 (257)
T ss_dssp HHHHHHHHTTEEEEEEESCCHH-------HHHHHHHHHHTCG--------GGGTSSEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEecCCHH-------HHHHHHHHHHhhh--------ccCCCCEEEEEEe
Confidence 3555668899999988888654 3334444444333 3356787666554
No 36
>d1psza_ c.92.2.2 (A:) Pneumococcal surface antigen PssA {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
Probab=25.02 E-value=41 Score=24.95 Aligned_cols=77 Identities=17% Similarity=0.233 Sum_probs=53.3
Q ss_pred ceeEeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcC
Q 030891 4 KAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDD 83 (169)
Q Consensus 4 KAA~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hd 83 (169)
|=-+||..+.+..|++.+|-+.+.+..++....+ ...|+-+++-+.++ ++=|+|| .++.+=+
T Consensus 9 kl~VVat~~~l~~iv~~I~Gd~v~V~~L~p~g~d--PH~yep~p~d~~~l-----------~~ADliv-~~G~~~E---- 70 (286)
T d1psza_ 9 KLKVVATNSIIADITKNIAGDKIDLHSIVPIGQD--PHEYEPLPEDVKKT-----------SEADLIF-YNGINLE---- 70 (286)
T ss_dssp CEEEEEEEHHHHHHHHHHHGGGEEEEEEECTTSC--SSSCCCCHHHHHHH-----------HHCSEEE-ECCTTST----
T ss_pred CcEEEEEChHHHHHHHHHcCCceEEEEccCCCCC--CccCcCCHHHHHHH-----------HhCCEEE-ECCCCcc----
Confidence 3458999999999999999998888888753322 35788888775544 4449988 4553321
Q ss_pred CCcccccChHHHHHHHHHHHHhcC
Q 030891 84 KGKAVAHDLEYINALVRVILQMAQ 107 (169)
Q Consensus 84 G~~~~k~diE~iD~lVg~im~~a~ 107 (169)
.++++.+..+.+.+.
T Consensus 71 ---------~~~~~~~~~~~~~~~ 85 (286)
T d1psza_ 71 ---------TGGNAWFTKLVENAK 85 (286)
T ss_dssp ---------THHHHHHHHHHHHTT
T ss_pred ---------hhHHHHHHHHhhhhc
Confidence 456677766666543
No 37
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}
Probab=24.98 E-value=26 Score=23.87 Aligned_cols=15 Identities=13% Similarity=0.381 Sum_probs=12.4
Q ss_pred CcccEEEEEeccCCC
Q 030891 65 SQFDLVLVHIGAGEK 79 (169)
Q Consensus 65 s~fDlVFlHI~a~d~ 79 (169)
++.|+|+++++.-|.
T Consensus 70 ~~~D~vvi~~G~ND~ 84 (208)
T d2o14a2 70 KPGDYFMLQLGINDT 84 (208)
T ss_dssp CTTCEEEEECCTGGG
T ss_pred CCCCEEEEEcCCCcc
Confidence 678999999987663
No 38
>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.96 E-value=19 Score=23.39 Aligned_cols=42 Identities=21% Similarity=0.398 Sum_probs=29.1
Q ss_pred hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCC
Q 030891 13 RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGE 78 (169)
Q Consensus 13 liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d 78 (169)
.++.+=+..||.|..... +.++++++ ...+||+|++-+..++
T Consensus 16 ~l~~~L~~~g~~v~~a~~----------------~~~a~~~~--------~~~~~dliilD~~mp~ 57 (120)
T d1zgza1 16 RLQSYFTQEGYTVSVTAS----------------GAGLREIM--------QNQSVDLILLDINLPD 57 (120)
T ss_dssp HHHHHHHHTTCEEEEESS----------------HHHHHHHH--------HHSCCSEEEEESCCSS
T ss_pred HHHHHHHHCCCEEEEECC----------------HHHHHHHH--------HhcCCCEEeeehhhcc
Confidence 345555667888854432 34666666 4478999999999886
No 39
>d1y6va1 c.76.1.1 (A:1-449) Alkaline phosphatase {Escherichia coli [TaxId: 562]}
Probab=24.89 E-value=14 Score=30.96 Aligned_cols=61 Identities=13% Similarity=0.176 Sum_probs=47.8
Q ss_pred CCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-hHHHHHHHHHHHHhcC
Q 030891 40 GSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQ 107 (169)
Q Consensus 40 ~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~ 107 (169)
.|....+.++||+.|. ...+-| |++|=-+.-|.++|+++...... +..+|++|+.+++.++
T Consensus 296 ~PtL~eMt~~AL~~L~------kn~kGF-fLmVEgg~ID~a~H~n~~~~~l~e~~~fd~AV~~a~~~~~ 357 (449)
T d1y6va1 296 VPTLAQMTDKAIELLS------KNEKGF-FLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAK 357 (449)
T ss_dssp SCCHHHHHHHHHHHHT------TCTTCE-EEEEEETHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh------cCCCcc-EEEeeccccchhhhcCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4678899999999992 111223 66666667789999999998888 9999999999988865
No 40
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]}
Probab=24.56 E-value=81 Score=20.87 Aligned_cols=16 Identities=25% Similarity=0.447 Sum_probs=12.3
Q ss_pred ccCcccEEEEEeccCC
Q 030891 63 EVSQFDLVLVHIGAGE 78 (169)
Q Consensus 63 ~~s~fDlVFlHI~a~d 78 (169)
...++|+|+++++.-|
T Consensus 64 ~~~~pd~vvi~~G~ND 79 (195)
T d1yzfa1 64 LIEKPDEVVIFFGAND 79 (195)
T ss_dssp GGGCCSEEEEECCTTT
T ss_pred cccccCEEEEeccccc
Confidence 3456899999998655
No 41
>d1v4aa2 d.218.1.9 (A:2-286) Glutamine synthase adenylyltransferase GlnE, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.00 E-value=30 Score=27.02 Aligned_cols=37 Identities=14% Similarity=0.302 Sum_probs=20.5
Q ss_pred CcccEEEEEeccCCCcCcCCCcccccC-hHHHHHHHHHHHHh
Q 030891 65 SQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQM 105 (169)
Q Consensus 65 s~fDlVFlHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~ 105 (169)
|+-|+||||-..+... +| . ...+ -++..++...++..
T Consensus 171 SDlDLIfvy~~~~~~~--~~-~-~~~~~~~~~~rla~~l~~~ 208 (285)
T d1v4aa2 171 SDIDLIFAWPEHGCTQ--GG-R-RELDNAQFFTRMGQRLIKV 208 (285)
T ss_dssp CCEEEEEEECC------------CCSCHHHHHHHHHHHHHHH
T ss_pred CCcceEEEecCCCCCC--CC-c-chhHHHHHHHHHHHHHHHH
Confidence 8899999994332221 11 1 1223 77888877766654
No 42
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}
Probab=23.76 E-value=26 Score=23.07 Aligned_cols=68 Identities=16% Similarity=0.195 Sum_probs=43.0
Q ss_pred hhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-h
Q 030891 14 LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-L 92 (169)
Q Consensus 14 iksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d-i 92 (169)
++.+-+..||.|..... +.++++++ ...+||+|++=+.+++- | +
T Consensus 19 l~~~L~~~g~~v~~a~~----------------~~~al~~~--------~~~~~dlvi~D~~mp~~-----------~G~ 63 (123)
T d1dbwa_ 19 LAFMLTMNGFAVKMHQS----------------AEAFLAFA--------PDVRNGVLVTDLRMPDM-----------SGV 63 (123)
T ss_dssp HHHHHHHTTCEEEEESC----------------HHHHHHHG--------GGCCSEEEEEECCSTTS-----------CHH
T ss_pred HHHHHHHCCCEEEEECC----------------HHHHHHHH--------hhcCCcEEEEeccCccc-----------cch
Confidence 45555677888843211 35777777 45789999999998863 3 5
Q ss_pred HHHHHHHHHHHHhcCCcccccceeEEEEEEeeccc
Q 030891 93 EYINALVRVILQMAQPATEVGSRLHLSVVLSYGQV 127 (169)
Q Consensus 93 E~iD~lVg~im~~a~~gs~i~srlhlsvvlsYG~~ 127 (169)
|.+.++ -+. . ..+.+.++-+|++.
T Consensus 64 e~~~~l----r~~-~------~~~~iI~lt~~~~~ 87 (123)
T d1dbwa_ 64 ELLRNL----GDL-K------INIPSIVITGHGDV 87 (123)
T ss_dssp HHHHHH----HHT-T------CCCCEEEEECTTCH
T ss_pred HHHHHH----Hhc-C------CCCeEEEEEeeCCH
Confidence 555443 222 2 34567777788764
No 43
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=23.69 E-value=34 Score=22.84 Aligned_cols=42 Identities=10% Similarity=0.024 Sum_probs=29.9
Q ss_pred hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCC
Q 030891 13 RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGE 78 (169)
Q Consensus 13 liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d 78 (169)
.++.+-+..||+|..... +.++++++ ...+||+|++-+...+
T Consensus 16 ~l~~~L~~~g~~v~~a~~----------------~~eal~~~--------~~~~~dlil~D~~~p~ 57 (139)
T d1w25a1 16 LLEAKLTAEYYEVSTAMD----------------GPTALAMA--------ARDLPDIILLDVMMPG 57 (139)
T ss_dssp HHHHHHHHTTCEEEEESS----------------HHHHHHHH--------HHHCCSEEEEESCCSS
T ss_pred HHHHHHHHCCCEEEEEcc----------------chhhhhhh--------hcccceeeeeeccccC
Confidence 455666677998854432 35677777 4467999999998875
No 44
>d1xvla1 c.92.2.2 (A:49-327) Mn transporter MntC {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=23.65 E-value=18 Score=27.07 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=41.2
Q ss_pred eEeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEec
Q 030891 6 ALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIG 75 (169)
Q Consensus 6 A~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~ 75 (169)
-+||..+.|..|++.+|-+.+++..+.....+ ...|+-+++-+.+ | ++-|+|| .++
T Consensus 8 ~Vvas~~~l~~iv~~I~Gd~~~V~~l~p~~~d--PH~y~~~p~d~~~-l----------~~ADliv-~~G 63 (279)
T d1xvla1 8 KVLTTFTVLADMVQNVAGDKLVVESITRIGAE--IHGYEPTPSDIVK-A----------QDADLIL-YNG 63 (279)
T ss_dssp EEEESSHHHHHHHHHHHTTTSEEEESSCSSCC--CSSCCCCHHHHHH-H----------HTCSEEE-ECC
T ss_pred EEEEEChHHHHHHHHHcCCceEEEEecCCCCC--cccCcCCHHHHHH-H----------HhCCEEE-ECC
Confidence 47999999999999999988888888643322 3578888777655 4 4458887 444
No 45
>d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]}
Probab=23.21 E-value=56 Score=23.76 Aligned_cols=72 Identities=7% Similarity=0.140 Sum_probs=31.9
Q ss_pred CchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCccccc
Q 030891 11 NSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAH 90 (169)
Q Consensus 11 ~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~ 90 (169)
++.+..+.+.+|+.++.-.--............+..+..+++.+ .+=+.|++|-...+
T Consensus 149 ~~~~~~~l~~~Gy~~~~w~~~~~Dw~~~~~~~~~~~~~~~~~~~----------~~g~IillHd~~~~------------ 206 (235)
T d2j13a1 149 SERTLALTKEMGYYNVFWSLAFLDWKVDEQRGWQYAHNNVMTMI----------HPGSILLLHAISKD------------ 206 (235)
T ss_dssp CHHHHHHHHHTTCEEECCSEECCCC------------------C----------CTTBEEEECCCSTT------------
T ss_pred hhhhHHHHHHcCCeEeecCCCCCCCccccchhHHHHHHHHHhcC----------CCCcEEEecCCCcC------------
Confidence 45677788889988765432221111111123344455555555 44478899832111
Q ss_pred ChHHHHHHHHHHHH
Q 030891 91 DLEYINALVRVILQ 104 (169)
Q Consensus 91 diE~iD~lVg~im~ 104 (169)
.++.|..+|..+.+
T Consensus 207 t~~aL~~li~~lk~ 220 (235)
T d2j13a1 207 NAEALAKIIDDLRE 220 (235)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 26777777766544
No 46
>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=22.94 E-value=36 Score=22.84 Aligned_cols=57 Identities=18% Similarity=0.293 Sum_probs=34.8
Q ss_pred CCceeEeecCch-hhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccC
Q 030891 2 GLKAALITTNSR-LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRG 59 (169)
Q Consensus 2 GmKAA~Vt~~~l-iksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~eg 59 (169)
|++-|++||.+. +..+-+.+|++=+ ++.+.+..+....-+......++++.+|++..
T Consensus 98 g~~~~v~Sn~~~~~~~~l~~~gl~~~-f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~ 155 (204)
T d2go7a1 98 GIQQFIYTHKGNNAFTILKDLGVESY-FTEILTSQSGFVRKPSPEAATYLLDKYQLNSD 155 (204)
T ss_dssp TCEEEEECSSCTHHHHHHHHHTCGGG-EEEEECGGGCCCCTTSSHHHHHHHHHHTCCGG
T ss_pred ccchhhhcccchhhhhhhhhcccccc-cccccccccccccchhHHHHHHHHHHhCCCCc
Confidence 678899998554 3345567776632 33333332232233456778899999987654
No 47
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=22.52 E-value=23 Score=23.13 Aligned_cols=42 Identities=14% Similarity=0.127 Sum_probs=29.4
Q ss_pred hhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCC
Q 030891 14 LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK 79 (169)
Q Consensus 14 iksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~ 79 (169)
++.+=...|++|....+ +.+|++++ ...+||+|++=+.+++.
T Consensus 16 l~~~L~~~g~~v~~a~~----------------~~~al~~l--------~~~~~dlil~D~~mp~~ 57 (121)
T d1zesa1 16 VCFVLEQNGFQPVEAED----------------YDSAVNQL--------NEPWPDLILLDWMLPGG 57 (121)
T ss_dssp HHHHHHHTTCEEEEECS----------------HHHHHHHS--------SSSCCSEEEECSSCTTS
T ss_pred HHHHHHHCCCEEEEECC----------------hHHHHHHH--------HccCCCEEEeecCCCCC
Confidence 34444566888854332 36788888 44789999999998863
No 48
>d2piia_ d.58.5.1 (A:) PII (product of glnB) {Escherichia coli [TaxId: 562]}
Probab=22.16 E-value=1e+02 Score=20.30 Aligned_cols=29 Identities=14% Similarity=0.174 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHHHhcCCcccccceeEEEE
Q 030891 92 LEYINALVRVILQMAQPATEVGSRLHLSV 120 (169)
Q Consensus 92 iE~iD~lVg~im~~a~~gs~i~srlhlsv 120 (169)
=+..|+.|..|++.++.|..--+.++++=
T Consensus 67 d~~ve~vv~~I~~~a~TG~~GDGkIfV~~ 95 (112)
T d2piia_ 67 DDIVDTCVDTIIRTAQTGKIGDGKIFVFD 95 (112)
T ss_dssp GGGHHHHHHHHHHHHCCSSTTCCCEEEEE
T ss_pred hHHHHHHHHHHHHhCCCCCCCceEEEEEE
Confidence 36889999999999999987777777653
No 49
>d1toaa_ c.92.2.2 (A:) Periplasmic zinc binding protein TroA {Treponema pallidum [TaxId: 160]}
Probab=22.01 E-value=20 Score=26.60 Aligned_cols=55 Identities=16% Similarity=0.185 Sum_probs=40.5
Q ss_pred eEeecCchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEE
Q 030891 6 ALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVH 73 (169)
Q Consensus 6 A~Vt~~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlH 73 (169)
-+||..+.|..|++.+|-+.+++..++...-+ ...|+-+++-+.+ | ++-|+||.+
T Consensus 4 ~Vv~t~~pl~~~v~~I~gd~v~V~~lip~~~d--PH~ye~~p~d~~~-l----------~~ADliv~~ 58 (277)
T d1toaa_ 4 LVVTTIGMIADAVKNIAQGDVHLKGLMGPGVD--PHLYTATAGDVEW-L----------GNADLILYN 58 (277)
T ss_dssp EEEESSHHHHHHHHHHHGGGSEEEESCCTTCC--TTTCCCCHHHHHH-H----------HHCSEEEEC
T ss_pred EEEEECHHHHHHHHHHcCCceEEEEecCCCCC--CcCCcCCHHHHHH-H----------hcCCEEEEC
Confidence 47899999999999999998888888653222 3577777766554 4 445888775
No 50
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.15 E-value=21 Score=23.46 Aligned_cols=42 Identities=21% Similarity=0.394 Sum_probs=29.1
Q ss_pred hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCC
Q 030891 13 RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGE 78 (169)
Q Consensus 13 liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d 78 (169)
.+..+=+..||+|..... ..++++++ ...+||+|++=+...+
T Consensus 17 ~l~~~L~~~g~~v~~a~~----------------~~~al~~l--------~~~~~dlii~D~~mp~ 58 (121)
T d1xhfa1 17 TLKSIFEAEGYDVFEATD----------------GAEMHQIL--------SEYDINLVIMDINLPG 58 (121)
T ss_dssp HHHHHHHTTTCEEEEESS----------------HHHHHHHH--------HHSCCSEEEECSSCSS
T ss_pred HHHHHHHHCCCEEEEECC----------------hHHHHHHH--------HhcCCCEEEeecccCC
Confidence 345555667998865432 34667777 3478999999998775
No 51
>d1s8na_ c.23.1.1 (A:) Probable two-component system transcriptional regulator Rv1626 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.00 E-value=36 Score=23.64 Aligned_cols=51 Identities=18% Similarity=0.309 Sum_probs=32.7
Q ss_pred HHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-hHHHHHHHHHHHHhcCCcccccceeEEEEEEeec
Q 030891 47 ASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQPATEVGSRLHLSVVLSYG 125 (169)
Q Consensus 47 a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d-iE~iD~lVg~im~~a~~gs~i~srlhlsvvlsYG 125 (169)
+.+|++++ +..+||+|++-+.+++- | +|.+-++- +. + ..-+.++-+|+
T Consensus 37 g~eal~~~--------~~~~pDlvllDi~mP~~-----------dG~e~~~~ir----~~-~-------~~pIi~lTa~~ 85 (190)
T d1s8na_ 37 GQEAVELA--------ELHKPDLVIMDVKMPRR-----------DGIDAASEIA----SK-R-------IAPIVVLTAFS 85 (190)
T ss_dssp HHHHHHHH--------HHHCCSEEEEESSCSSS-----------CHHHHHHHHH----HT-T-------CSCEEEEEEGG
T ss_pred HHHHHHHH--------hcCCCCEEEEeccccCc-----------chHHHHHHHH----hc-C-------CCCEEEEeCCC
Confidence 35667777 45789999999998863 4 66665542 11 1 23455677777
Q ss_pred ccc
Q 030891 126 QVL 128 (169)
Q Consensus 126 ~~~ 128 (169)
...
T Consensus 86 ~~~ 88 (190)
T d1s8na_ 86 QRD 88 (190)
T ss_dssp GHH
T ss_pred CHH
Confidence 653
No 52
>d1atza_ c.62.1.1 (A:) von Willebrand factor A3 domain, vWA3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.97 E-value=41 Score=23.18 Aligned_cols=74 Identities=15% Similarity=0.218 Sum_probs=40.7
Q ss_pred cccEEEEEeccCCCcCcCCCcccccChHHHHHHHHHHHHhcCCcccccceeEEEEEEeeccccccCCCcceeeeeccccc
Q 030891 66 QFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKS 145 (169)
Q Consensus 66 ~fDlVFlHI~a~d~a~hdG~~~~k~diE~iD~lVg~im~~a~~gs~i~srlhlsvvlsYG~~~~~~~~~~~v~~~~~e~~ 145 (169)
+-|+|||= ..... - ...+++++=..+..+++....|.. +.|++|| .||+-..-. ..|.-.++.++..
T Consensus 2 PlDivfli-D~S~s---~----~~~~f~~~k~~v~~~i~~~~i~~~---~~rv~vv-~f~~~~~~~-~~l~~~~~~~~l~ 68 (184)
T d1atza_ 2 PLDVILLL-DGSSS---F----PASYFDEMKSFAKAFISKANIGPR---LTQVSVL-QYGSITTID-VPWNVVPEKAHLL 68 (184)
T ss_dssp CEEEEEEE-ECSSS---S----CHHHHHHHHHHHHHHHHHSCBSTT---SEEEEEE-EESSSEEEE-ECTTCCCCHHHHH
T ss_pred ceEEEEEE-eCCCC---C----CHHHHHHHHHHHHHHHHhcCCCCC---CcEEEEE-EEeccceee-ccccccccHHHHH
Confidence 45888873 22211 1 122366666677777777654432 5688874 687654431 1333344556666
Q ss_pred ccccccc
Q 030891 146 SDLSALF 152 (169)
Q Consensus 146 s~l~~L~ 152 (169)
..++.|.
T Consensus 69 ~~i~~l~ 75 (184)
T d1atza_ 69 SLVDVMQ 75 (184)
T ss_dssp HHHHTCC
T ss_pred HHHHhhh
Confidence 6666664
No 53
>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}
Probab=20.94 E-value=39 Score=23.52 Aligned_cols=57 Identities=18% Similarity=0.236 Sum_probs=37.6
Q ss_pred CCceeEeecCch--hhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhcccc
Q 030891 2 GLKAALITTNSR--LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQR 58 (169)
Q Consensus 2 GmKAA~Vt~~~l--iksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~e 58 (169)
|++-+++||.+. +..+-+.+|+.-+.++..+...+....-+.-....++++.||...
T Consensus 115 g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p 173 (257)
T d1swva_ 115 GIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYP 173 (257)
T ss_dssp TCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCS
T ss_pred ccceeecCCCchhhHHHHHHHHhhcccccccccccccccccccChHHHHHHHHHhCCCC
Confidence 678899998775 666778888876655544333333222345567888999997643
No 54
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=20.77 E-value=16 Score=22.61 Aligned_cols=46 Identities=7% Similarity=0.086 Sum_probs=35.8
Q ss_pred chhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhcccc
Q 030891 12 SRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQR 58 (169)
Q Consensus 12 ~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~e 58 (169)
..|+-+++.+|+.+-++.-+.-+... -+.....++.++++-|||..
T Consensus 3 ~Ti~diA~~agvS~sTVSr~l~~~~~-vs~~tr~rI~~~a~~lgY~p 48 (59)
T d1efaa1 3 VTLYDVAEYAGVSYQTVSRVVNQASH-VSAKTREKVEAAMAELNYIP 48 (59)
T ss_dssp CCHHHHHHTTTSCHHHHHHHHTTCSS-CCTHHHHHHHHHHHHHTCCC
T ss_pred CCHHHHHHHHCCCHHHHHHHHCCCCc-CCHHHHHHHHHHHHHHCCCc
Confidence 35788999999999998887654443 24567788899999999875
No 55
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=20.70 E-value=20 Score=23.47 Aligned_cols=69 Identities=20% Similarity=0.385 Sum_probs=42.3
Q ss_pred hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCcccccC-
Q 030891 13 RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD- 91 (169)
Q Consensus 13 liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~d- 91 (169)
.++.+-...||+|..... ..++++++ ...+||+|++=+.+++. +
T Consensus 16 ~l~~~L~~~g~~v~~a~~----------------g~eal~~~--------~~~~~dlillD~~mP~~-----------~G 60 (119)
T d1peya_ 16 LLNEVFNKEGYQTFQAAN----------------GLQALDIV--------TKERPDLVLLDMKIPGM-----------DG 60 (119)
T ss_dssp HHHHHHHHTTCEEEEESS----------------HHHHHHHH--------HHHCCSEEEEESCCTTC-----------CH
T ss_pred HHHHHHHHcCCEEEEeCC----------------HHHHHHHH--------HhCCCCEEEEeccCCCC-----------CH
Confidence 445555678888854221 34567776 34679999999998863 3
Q ss_pred hHHHHHHHHHHHHhcCCcccccceeEEEEEEeeccc
Q 030891 92 LEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQV 127 (169)
Q Consensus 92 iE~iD~lVg~im~~a~~gs~i~srlhlsvvlsYG~~ 127 (169)
+|-+-+ +- ... +.+.+.++-+|++.
T Consensus 61 ~el~~~----lr-~~~------~~~pvi~lt~~~~~ 85 (119)
T d1peya_ 61 IEILKR----MK-VID------ENIRVIIMTAYGEL 85 (119)
T ss_dssp HHHHHH----HH-HHC------TTCEEEEEESSCCH
T ss_pred HHHHHH----HH-HhC------CCCcEEEEecCCCH
Confidence 444433 22 212 34567777778764
No 56
>d1qpza1 a.35.1.5 (A:2-58) Purine repressor (PurR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=20.69 E-value=11 Score=23.23 Aligned_cols=46 Identities=11% Similarity=0.127 Sum_probs=35.5
Q ss_pred hhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccC
Q 030891 13 RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRG 59 (169)
Q Consensus 13 liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~eg 59 (169)
.|+-+++.+|..+-++.-...+... -+..-..++.++.+-|||+..
T Consensus 2 Ti~dvA~~agVS~sTVSr~ln~~~~-vs~~tr~rV~~~a~~lgY~pn 47 (57)
T d1qpza1 2 TIKDVAKRANVSTTTVSHVINKTRF-VAEETRNAVWAAIKELHYSPS 47 (57)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHTCSC-CCHHHHHHHHHHHHHHTCCCC
T ss_pred CHHHHHHHHCcCHHHHHHHHCCCCc-cCHHHHHHHHHHHHHHCCCCC
Confidence 4788999999999998887555433 245677888999999998763
No 57
>d1ny1a_ c.6.2.3 (A:) Probable polysaccharide deacetylase PdaA {Bacillus subtilis [TaxId: 1423]}
Probab=20.62 E-value=1.1e+02 Score=22.07 Aligned_cols=73 Identities=11% Similarity=0.138 Sum_probs=40.2
Q ss_pred CchhhhhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcCcCCCccccc
Q 030891 11 NSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAH 90 (169)
Q Consensus 11 ~~liksfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~hdG~~~~k~ 90 (169)
++.+..+.+.+|+.++.-.-...................+++.+ ..| +.|++|-...+
T Consensus 147 ~~~~~~~l~~~Gy~~v~w~~d~~Dw~~~~~~~~~~~~~~~~~~~--~~G--------~IvL~Hd~~~~------------ 204 (235)
T d1ny1a_ 147 SEYVLKETKRLGYQTVFWSVAFVDWKINNQKGKKYAYDHMIKQA--HPG--------AIYLLHTVSRD------------ 204 (235)
T ss_dssp CHHHHHHHHHTTCEEBCCSBCCSCCCGGGCCCHHHHHHHHHHTC--CTT--------EEEEECSCSTT------------
T ss_pred chhHHHHHHHcCCeEEEEEecccccccccchhHHHHHHHHHhcc--CCC--------cEEEEECCCcc------------
Confidence 45677888999998865432211111111123455566666654 233 68999932211
Q ss_pred ChHHHHHHHHHHHHh
Q 030891 91 DLEYINALVRVILQM 105 (169)
Q Consensus 91 diE~iD~lVg~im~~ 105 (169)
.++.|+.+|..+.+.
T Consensus 205 t~~aL~~lI~~lk~~ 219 (235)
T d1ny1a_ 205 NAEALDDAITDLKKQ 219 (235)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC
Confidence 267777777665443
No 58
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=20.24 E-value=69 Score=22.72 Aligned_cols=49 Identities=10% Similarity=0.061 Sum_probs=29.8
Q ss_pred hhhhhhcceeeecCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEEeccCCCcC
Q 030891 16 SFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTN 81 (169)
Q Consensus 16 sfg~~lGf~V~~~~~l~g~~ds~~~~~~~~~a~~al~LLGf~egk~~~~s~fDlVFlHI~a~d~a~ 81 (169)
...+.+||+|+-.+-....... .+ ...+-++| ++-|+|.+|+-.++++-
T Consensus 59 ~~l~~~g~~v~~~d~~~~~~~~----~~---~~~l~ell----------~~sDiv~~~~pl~~~t~ 107 (181)
T d1qp8a1 59 KILAALGAQVRGFSRTPKEGPW----RF---TNSLEEAL----------REARAAVCALPLNKHTR 107 (181)
T ss_dssp HHHHHTTCEEEEECSSCCCSSS----CC---BSCSHHHH----------TTCSEEEECCCCSTTTT
T ss_pred eeeeccccccccccccccccce----ee---eechhhhh----------hccchhhcccccccccc
Confidence 3455669998877644222111 11 11244667 88899999999887544
Done!