BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030898
(169 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LCA1|TMP14_ARATH Thylakoid membrane phosphoprotein 14 kDa, chloroplastic
OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2
Length = 174
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 121/164 (73%), Gaps = 7/164 (4%)
Query: 13 TLVDAKAP-RQSAPASTQCVSLPTLPPPPVPSQTRPWKATTYCRKMARNVMAMATGEA-- 69
T++D++AP + A AS S +LP P+ S TR KAT YCRK+ RNV+ AT E
Sbjct: 11 TIIDSRAPPSRLASASASSPSCISLPTLPIQSHTRAAKATAYCRKIVRNVVTRATTEVGE 70
Query: 70 ----PAEVAATELPEIVKTVQEAWDKVEDKYAVTSLAVTVAIAVWGSTGMISAIDRLPLV 125
E TELPEIVKT QEAW+KV+DKYA+ SLA +A+WGS GMISAIDRLPLV
Sbjct: 71 APATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLV 130
Query: 126 PGVLELVGIGYTGWFAYKNLVFKPDREALIQKIKDTYKDIIGSS 169
PGVLELVGIGYTGWF YKNLVFKPDREAL +K+K TYKDI+GSS
Sbjct: 131 PGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS 174
>sp|O04616|Y4115_ARATH Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis
thaliana GN=At4g01150 PE=1 SV=1
Length = 164
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 6/166 (3%)
Query: 5 ALSISSSSTLVDAKAPRQSAPASTQCVSLPTLPPPPV--PSQTRPWKATTYCRKMARNVM 62
A+S+++SS++ PR A ST+C ++P LPP S T P K + + V
Sbjct: 2 AISVAASSSMA-VMVPRVPA-VSTRCSAVPYLPPRSFGRSSFTVPLKLVS--GNGLQKVE 57
Query: 63 AMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTSLAVTVAIAVWGSTGMISAIDRL 122
+ T + E ++ + E++ ++E WD +E+K V +AVW S+ ++ AI+ +
Sbjct: 58 LLKTRASSEETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSV 117
Query: 123 PLVPGVLELVGIGYTGWFAYKNLVFKPDREALIQKIKDTYKDIIGS 168
PL+P V+ELVG+GYTGWF Y+ L+FK R+ L + I+ K I GS
Sbjct: 118 PLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGS 163
>sp|Q119Z5|SYE_TRIEI Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101)
GN=gltX PE=3 SV=1
Length = 881
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 36/53 (67%)
Query: 115 MISAIDRLPLVPGVLELVGIGYTGWFAYKNLVFKPDREALIQKIKDTYKDIIG 167
+I A+D +P++ + EL+G+ Y WF Y+ L+ + +R+ L+ KI++ ++I G
Sbjct: 826 VIEALDGIPILSIIFELIGVIYLVWFVYRYLLKRSNRQELLDKIENIKREIFG 878
>sp|Q8YX97|SYV_NOSS1 Valine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=valS PE=3 SV=1
Length = 1014
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 52 TYCRKMAR-NVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTSLAVTVAIAVW 110
+Y + +A+ + +A G+ P+ V + + +KT+ + L V +A+A
Sbjct: 814 SYIKDLAKVETLTIAAGQQPSTVTKKKPQKGLKTIGLV------IAGLVFLRVALAVA-- 865
Query: 111 GSTGMISAIDRLPLVPGVLELVGIGYTGWFAYKNLVFKPDREALIQKI 158
+D +P + E+VG+GY+ WF +NL+ P R+ + K
Sbjct: 866 ------DTVDNVPFLGTFFEIVGLGYSAWFVTRNLLSTPARKRFLAKF 907
>sp|Q8MVR1|GBPC_DICDI Cyclic GMP-binding protein C OS=Dictyostelium discoideum GN=gbpC PE=1
SV=1
Length = 2631
Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 10/45 (22%)
Query: 3 SSALSISSSSTLVDAKAPRQSAPASTQCVSLPTLPPPPVPSQTRP 47
SS +S+S+S+T PAS + ++ PTLP PP P Q+ P
Sbjct: 2189 SSIMSLSNSNT----------PPASPRVMTTPTLPSPPAPLQSPP 2223
>sp|Q14766|LTBP1_HUMAN Latent-transforming growth factor beta-binding protein 1 OS=Homo
sapiens GN=LTBP1 PE=1 SV=4
Length = 1721
Score = 35.0 bits (79), Expect = 0.21, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 17 AKAPRQSAPASTQCVSLPTLPPPPVPSQTRPWKATTYCRKMARNVMAMATGEAPAEVAAT 76
K P P +TQ V+ T PPP+P++ P +A T+ R+ V AP E
Sbjct: 751 GKGPVFVKPKNTQPVAKST-HPPPLPAKEEPVEALTFSREHGPGVAEPEVATAPPE---K 806
Query: 77 ELPEI 81
E+P +
Sbjct: 807 EIPSL 811
>sp|A1D3C5|RSP5_NEOFI Probable E3 ubiquitin-protein ligase hulA OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=hulA PE=3 SV=1
Length = 816
Score = 33.5 bits (75), Expect = 0.65, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 4 SALSISSSSTLVDAKAPRQSAPAST------QCVSLPTLPPPPVPSQTRP 47
S + S+SS LV AP S PA++ S P+L P VPS TRP
Sbjct: 149 SHVQSSTSSGLVPQVAPSSSHPAASGAAPVDPSASNPSLNPQRVPSTTRP 198
>sp|Q4WTF3|RSP5_ASPFU Probable E3 ubiquitin-protein ligase hulA OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=hulA PE=3 SV=2
Length = 813
Score = 33.5 bits (75), Expect = 0.65, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 4 SALSISSSSTLVDAKAPRQSAPAST------QCVSLPTLPPPPVPSQTRP 47
S + S+SS LV AP S PA++ S P+L P VPS TRP
Sbjct: 146 SHVQSSTSSGLVPQVAPSSSHPAASGTAPVDPSASNPSLNPQRVPSTTRP 195
>sp|B0XQ72|RSP5_ASPFC Probable E3 ubiquitin-protein ligase hulA OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=hulA PE=3
SV=2
Length = 813
Score = 33.5 bits (75), Expect = 0.65, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 4 SALSISSSSTLVDAKAPRQSAPAST------QCVSLPTLPPPPVPSQTRP 47
S + S+SS LV AP S PA++ S P+L P VPS TRP
Sbjct: 146 SHVQSSTSSGLVPQVAPSSSHPAASGTAPVDPSASNPSLNPQRVPSTTRP 195
>sp|B1JTU4|G6PI_BURCC Glucose-6-phosphate isomerase OS=Burkholderia cenocepacia (strain
MC0-3) GN=pgi PE=3 SV=1
Length = 540
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + V E WD V +Y++ S L+
Sbjct: 218 RDWFVARGCPEDALAKHFVGVSANPAEVVKFGIA--ADNVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M PL +P +L L+GI Y +F ++ + P E
Sbjct: 276 IMIAIGPEQFDELLAGANDMDRHFREAPLERNLPVLLGLIGIWYRNFFGSQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|B4EBL7|G6PI_BURCJ Glucose-6-phosphate isomerase OS=Burkholderia cepacia (strain J2315
/ LMG 16656) GN=pgi PE=3 SV=1
Length = 540
Score = 33.5 bits (75), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAV-TSLAVT 104
R W C + A + PAEV + V E WD V +Y++ +++ ++
Sbjct: 218 RDWFVARGCPEDALAKHFVGVSANPAEVVKFGIA--ADNVFEMWDWVGGRYSLWSAVGLS 275
Query: 105 VAIAVW---------GSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ IAV G+ M PL +P +L L+GI Y +F ++ + P E
Sbjct: 276 IMIAVGPEQFDELLAGANDMDRHFREAPLERNLPVLLGLIGIWYRNFFGSQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|Q13Z07|G6PI_BURXL Glucose-6-phosphate isomerase OS=Burkholderia xenovorans (strain
LB400) GN=pgi PE=3 SV=1
Length = 540
Score = 33.5 bits (75), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAV-TSLAVT 104
R W C + A + PAEV + + + V E WD V +Y++ +++ ++
Sbjct: 218 RDWFVEKGCPESALAKHFVGVSANPAEVVKFGIAK--ENVFEMWDWVGGRYSLWSAVGLS 275
Query: 105 VAIAVW---------GSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ IAV G+ M PL +P +L ++GI Y +F ++ + P E
Sbjct: 276 IMIAVGPQQFGELLAGANEMDQHFRDAPLEKNLPVLLGMIGIWYRNFFGSQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|Q54DV3|Y2016_DICDI von Willebrand factor A domain-containing protein DDB_G0292016
OS=Dictyostelium discoideum GN=DDB_G0292016 PE=4 SV=1
Length = 918
Score = 33.1 bits (74), Expect = 0.78, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 6 LSISSSSTLVDAKAPRQSAPASTQCVSLPTLPPPPVPSQTRPWKAT-------------- 51
L + S + +++P S P +T +S P PSQ + K+T
Sbjct: 772 LKVKPSKVPLPSRSPSVSKPTTTSLLSPSPKSAPSAPSQQKSVKSTGDLLIDLLKIQKSN 831
Query: 52 TYCRKMARNVMAMATGEAPAEVAATELPEIVKTV 85
K + + + + T +APAE++ TEL +I T+
Sbjct: 832 GSWTKSSIDQLKIPTDKAPAELSTTELNDIWVTI 865
>sp|B2JGM3|G6PI_BURP8 Glucose-6-phosphate isomerase OS=Burkholderia phymatum (strain DSM
17167 / STM815) GN=pgi PE=3 SV=1
Length = 540
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 46 RPWKATTYC--RKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS--- 100
R W C ++A++ + ++ PAEV + + + V E WD V +Y++ S
Sbjct: 218 RDWFIQKGCPESELAKHFVGVSAN--PAEVVKFGIAQ--ENVFEMWDWVGGRYSLWSAVG 273
Query: 101 LAVTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPD 150
L++ +AI + G+ M PL +P ++ ++GI Y +F ++ + P
Sbjct: 274 LSIVIAIGPKQFDELLAGANEMDEHFRSAPLERNLPVLMGMIGIWYRNFFGSQSYLVAPY 333
Query: 151 REAL 154
EAL
Sbjct: 334 SEAL 337
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 65 ATGEAPAEVAATELPEIVKTVQEAWDKV 92
TG AP V+ T +P ++K +Q+ WD V
Sbjct: 59 GTGSAPRNVSGTSIPSLLKMLQDEWDTV 86
>sp|Q7V5V5|MURD_PROMM UDP-N-acetylmuramoylalanine--D-glutamate ligase OS=Prochlorococcus
marinus (strain MIT 9313) GN=murD PE=3 SV=1
Length = 460
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 7 SISSSSTLVDAKAPRQSAPASTQCVSLPTLPPPPV---PSQTRPWKATTYCRKMARNVMA 63
I S D+KA A CV L +PPP V QT+ A+ + +++ +N A
Sbjct: 324 HIQQMSVYNDSKATNYDAA----CVGLKAVPPPAVVLAGGQTKQGDASGWLKQLDQNACA 379
Query: 64 MATGEAPAEVAATELPEIVKT 84
+ A A+EL E++KT
Sbjct: 380 VILFGA----GASELQELIKT 396
>sp|A3NAH2|G6PI_BURP6 Glucose-6-phosphate isomerase OS=Burkholderia pseudomallei (strain
668) GN=pgi PE=3 SV=1
Length = 540
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + E V E WD V +Y++ S L+
Sbjct: 218 RDWFVANGCPEGALAKHFVGVSANPAEVVKFGIAE--ANVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M PL +P + LVGI Y +F ++ + P E
Sbjct: 276 IMIAIGPERFDELLAGARDMDEHFRTAPLERNLPALQGLVGIWYRNFFGAQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|B1YRY9|G6PI_BURA4 Glucose-6-phosphate isomerase OS=Burkholderia ambifaria (strain
MC40-6) GN=pgi PE=3 SV=1
Length = 540
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + V E WD V +Y++ S L+
Sbjct: 218 RDWFVARGCPEAALAKHFVGVSANPAEVVKFGID--ADNVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M + PL +P +L L+GI Y +F ++ + P E
Sbjct: 276 IMIAIGPEQFDELLAGANDMDRHFRQAPLERNLPVLLGLIGIWYRNFFGSQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|A9AJR8|G6PI_BURM1 Glucose-6-phosphate isomerase OS=Burkholderia multivorans (strain
ATCC 17616 / 249) GN=pgi PE=3 SV=1
Length = 540
Score = 31.6 bits (70), Expect = 2.3, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + V E WD V +Y++ S L+
Sbjct: 218 RDWFVAKGCPEDALAKHFVGVSANPAEVVKFGIA--ADNVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M PL +P +L L+GI Y +F ++ + P E
Sbjct: 276 IMIAIGPEQFDELLAGANDMDRHFREAPLERNLPVLLGLIGIWYRNFFGSQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|P03363|POL_HTLV2 Gag-Pro-Pol polyprotein OS=Human T-cell leukemia virus 2
GN=gag-pro-pol PE=1 SV=4
Length = 1461
Score = 31.6 bits (70), Expect = 2.7, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 20 PRQSAPASTQCVSLPTLPPPPVPSQTRPWK 49
P P +TQC P L PP PS RPW+
Sbjct: 125 PPYVEPTTTQC--FPILHPPGAPSAHRPWQ 152
>sp|Q39FF4|G6PI_BURS3 Glucose-6-phosphate isomerase OS=Burkholderia sp. (strain 383)
GN=pgi PE=3 SV=2
Length = 540
Score = 31.2 bits (69), Expect = 3.3, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + V E WD V +Y++ S L+
Sbjct: 218 RDWFVARGCPEDALAKHFVGVSANPAEVVKFGIA--ADNVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M PL +P +L L+GI Y +F ++ + P E
Sbjct: 276 IMIAIGPEQFDELLAGANDMDRHFREAPLERNLPVLLGLIGIWYRNFFGSQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|Q1BH79|G6PI_BURCA Glucose-6-phosphate isomerase OS=Burkholderia cenocepacia (strain
AU 1054) GN=pgi PE=3 SV=2
Length = 540
Score = 31.2 bits (69), Expect = 3.4, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + V E WD V +Y++ S L+
Sbjct: 218 RDWFVARGCPEDALAKHFVGVSANPAEVVKFGIA--ADNVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M PL +P +L L+GI Y +F ++ + P E
Sbjct: 276 IMIAIGPEQFDELLAGANDMDRHFREAPLERNLPVLLGLIGIWYRNFFGSQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|P03353|PRO_HTLV2 Gag-Pro polyprotein OS=Human T-cell leukemia virus 2 GN=gag-pro
PE=1 SV=3
Length = 602
Score = 31.2 bits (69), Expect = 3.4, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 20 PRQSAPASTQCVSLPTLPPPPVPSQTRPWK 49
P P +TQC P L PP PS RPW+
Sbjct: 125 PPYVEPTTTQC--FPILHPPGAPSAHRPWQ 152
>sp|A1V4V8|G6PI_BURMS Glucose-6-phosphate isomerase OS=Burkholderia mallei (strain SAVP1)
GN=pgi PE=3 SV=1
Length = 540
Score = 30.8 bits (68), Expect = 4.1, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + E V E WD V +Y++ S L+
Sbjct: 218 RDWFVANGCPEGALAKHFVGVSANPAEVVKFGIAE--ANVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M PL +P + LVGI Y +F ++ + P E
Sbjct: 276 IMIAIGPERFDELLAGARDMDEHFRTAPLERNLPVLQGLVGIWYRNFFGAQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|Q62JL8|G6PI_BURMA Glucose-6-phosphate isomerase OS=Burkholderia mallei (strain ATCC
23344) GN=pgi PE=3 SV=1
Length = 540
Score = 30.8 bits (68), Expect = 4.1, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + E V E WD V +Y++ S L+
Sbjct: 218 RDWFVANGCPEGALAKHFVGVSANPAEVVKFGIAE--ANVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M PL +P + LVGI Y +F ++ + P E
Sbjct: 276 IMIAIGPERFDELLAGARDMDEHFRTAPLERNLPVLQGLVGIWYRNFFGAQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|A2SBH6|G6PI_BURM9 Glucose-6-phosphate isomerase OS=Burkholderia mallei (strain NCTC
10229) GN=pgi PE=3 SV=1
Length = 540
Score = 30.8 bits (68), Expect = 4.1, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + E V E WD V +Y++ S L+
Sbjct: 218 RDWFVANGCPEGALAKHFVGVSANPAEVVKFGIAE--ANVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M PL +P + LVGI Y +F ++ + P E
Sbjct: 276 IMIAIGPERFDELLAGARDMDEHFRTAPLERNLPVLQGLVGIWYRNFFGAQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|A3MKI3|G6PI_BURM7 Glucose-6-phosphate isomerase OS=Burkholderia mallei (strain NCTC
10247) GN=pgi PE=3 SV=1
Length = 540
Score = 30.8 bits (68), Expect = 4.1, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + E V E WD V +Y++ S L+
Sbjct: 218 RDWFVANGCPEGALAKHFVGVSANPAEVVKFGIAE--ANVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M PL +P + LVGI Y +F ++ + P E
Sbjct: 276 IMIAIGPERFDELLAGARDMDEHFRTAPLERNLPVLQGLVGIWYRNFFGAQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|Q63V31|G6PI_BURPS Glucose-6-phosphate isomerase OS=Burkholderia pseudomallei (strain
K96243) GN=pgi PE=3 SV=1
Length = 540
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + E V E WD V +Y++ S L+
Sbjct: 218 RDWFVANGCPEGALAKHFVGVSANPAEVVKFGIAE--ANVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M PL +P + LVGI Y +F ++ + P E
Sbjct: 276 IMIAIGPERFDELLAGARDMDEHFRTAPLERNLPVLQGLVGIWYRNFFGAQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|Q3JRE2|G6PI_BURP1 Glucose-6-phosphate isomerase OS=Burkholderia pseudomallei (strain
1710b) GN=pgi PE=3 SV=1
Length = 540
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + E V E WD V +Y++ S L+
Sbjct: 218 RDWFVANGCPEGALAKHFVGVSANPAEVVKFGIAE--ANVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M PL +P + LVGI Y +F ++ + P E
Sbjct: 276 IMIAIGPERFDELLAGARDMDEHFRTAPLERNLPVLQGLVGIWYRNFFGAQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|A3NW90|G6PI_BURP0 Glucose-6-phosphate isomerase OS=Burkholderia pseudomallei (strain
1106a) GN=pgi PE=3 SV=1
Length = 540
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + E V E WD V +Y++ S L+
Sbjct: 218 RDWFVANGCPEGALAKHFVGVSANPAEVVKFGIAE--ANVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M PL +P + LVGI Y +F ++ + P E
Sbjct: 276 IMIAIGPERFDELLAGARDMDEHFRTAPLERNLPVLQGLVGIWYRNFFGAQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|Q2SWP6|G6PI_BURTA Glucose-6-phosphate isomerase OS=Burkholderia thailandensis (strain
E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=pgi PE=3
SV=2
Length = 540
Score = 30.4 bits (67), Expect = 4.9, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTS---LA 102
R W C + A + PAEV + E V E WD V +Y++ S L+
Sbjct: 218 REWFVANGCPEDALAKHFVGVSANPAEVVKFGIAE--ANVFEMWDWVGGRYSLWSAVGLS 275
Query: 103 VTVAIA-------VWGSTGMISAIDRLPL---VPGVLELVGIGYTGWFAYKNLVFKPDRE 152
+ +AI + G+ M PL +P + LVGI Y +F ++ + P E
Sbjct: 276 IMIAIGPERFAELLAGAHDMDEHFRTAPLERNLPVLQGLVGIWYRNFFGAQSYLVAPYSE 335
Query: 153 AL 154
AL
Sbjct: 336 AL 337
>sp|A6Q2B4|CH60_NITSB 60 kDa chaperonin OS=Nitratiruptor sp. (strain SB155-2) GN=groL
PE=3 SV=1
Length = 547
Score = 30.4 bits (67), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 55 RKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVTSLAVTVAIAVWGSTG 114
K+ + +A G A +V A E+ +E D+V+D A T AV I + G T
Sbjct: 364 EKLQERLAKLAGGVAVIKVGAATETEM----KEKKDRVDDALAATKAAVEEGIVIGGGTA 419
Query: 115 MISAIDRLPL 124
++ A +++ L
Sbjct: 420 LVRAANKVNL 429
>sp|B5ZAW2|ATPG_UREU1 ATP synthase gamma chain OS=Ureaplasma urealyticum serovar 10
(strain ATCC 33699 / Western) GN=atpG PE=3 SV=1
Length = 286
Score = 29.6 bits (65), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 116 ISAIDRLPLVPGVLELVGIGYTGWFAYKNLVFKPDREALIQKIKDTY 162
++ ID LP VL + T A N++F+P++ L++KI TY
Sbjct: 177 VNNIDVLPFDKTVLTKDNLAETIELAKDNIIFQPNKVELVKKILPTY 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.127 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,641,294
Number of Sequences: 539616
Number of extensions: 2324912
Number of successful extensions: 14254
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 14101
Number of HSP's gapped (non-prelim): 201
length of query: 169
length of database: 191,569,459
effective HSP length: 109
effective length of query: 60
effective length of database: 132,751,315
effective search space: 7965078900
effective search space used: 7965078900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)