Query 030899
Match_columns 169
No_of_seqs 452 out of 1506
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 06:16:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030899.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030899hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1111 N-acetylglucosaminyltr 100.0 4.8E-32 1E-36 217.9 9.2 148 1-150 276-423 (426)
2 cd03796 GT1_PIG-A_like This fa 99.9 1.5E-25 3.3E-30 186.6 8.6 122 1-122 274-397 (398)
3 TIGR02472 sucr_P_syn_N sucrose 99.8 7.6E-19 1.7E-23 148.5 7.0 90 1-90 345-438 (439)
4 TIGR03088 stp2 sugar transfera 99.8 1.5E-18 3.3E-23 142.7 7.9 93 1-93 277-373 (374)
5 PRK10125 putative glycosyl tra 99.7 1.8E-18 4E-23 145.1 7.3 92 1-92 311-404 (405)
6 PHA01630 putative group 1 glyc 99.7 8.6E-18 1.9E-22 137.7 8.8 92 1-92 214-330 (331)
7 TIGR02468 sucrsPsyn_pln sucros 99.7 7.3E-18 1.6E-22 152.9 8.9 96 1-97 576-675 (1050)
8 PRK15484 lipopolysaccharide 1, 99.7 7.7E-18 1.7E-22 140.0 8.1 94 1-94 281-379 (380)
9 TIGR02470 sucr_synth sucrose s 99.7 5.4E-18 1.2E-22 150.7 7.3 90 1-90 648-745 (784)
10 PLN00142 sucrose synthase 99.7 7.5E-18 1.6E-22 150.0 7.1 90 1-90 671-768 (815)
11 PRK15427 colanic acid biosynth 99.7 1.6E-17 3.4E-22 139.4 7.7 92 1-92 303-405 (406)
12 cd03792 GT1_Trehalose_phosphor 99.7 1.5E-17 3.3E-22 137.1 7.3 92 1-92 278-371 (372)
13 TIGR02149 glgA_Coryne glycogen 99.7 2.4E-17 5.1E-22 135.8 7.3 94 1-94 285-388 (388)
14 PRK00654 glgA glycogen synthas 99.7 6.9E-17 1.5E-21 137.6 9.2 95 1-95 361-465 (466)
15 TIGR03449 mycothiol_MshA UDP-N 99.7 5.7E-17 1.2E-21 134.7 8.5 94 1-95 307-404 (405)
16 PLN02871 UDP-sulfoquinovose:DA 99.7 7E-17 1.5E-21 137.4 7.9 95 1-96 336-438 (465)
17 cd04962 GT1_like_5 This family 99.7 7.2E-17 1.6E-21 131.7 7.7 92 1-92 275-370 (371)
18 PRK14099 glycogen synthase; Pr 99.7 8.7E-17 1.9E-21 137.8 7.9 93 1-96 374-482 (485)
19 cd03813 GT1_like_3 This family 99.7 5.8E-17 1.3E-21 138.4 6.7 91 1-91 375-475 (475)
20 cd03802 GT1_AviGT4_like This f 99.7 1.9E-16 4.2E-21 127.2 9.1 87 1-91 248-335 (335)
21 PRK15490 Vi polysaccharide bio 99.7 1.2E-16 2.5E-21 137.4 8.0 92 1-92 477-575 (578)
22 TIGR02918 accessory Sec system 99.7 6.9E-17 1.5E-21 138.8 6.6 91 1-92 397-499 (500)
23 cd03825 GT1_wcfI_like This fam 99.7 1.4E-16 3.1E-21 129.1 8.0 92 1-92 269-364 (365)
24 cd03818 GT1_ExpC_like This fam 99.7 1.4E-16 2.9E-21 132.6 6.9 87 1-87 305-395 (396)
25 PLN02949 transferase, transfer 99.7 2.6E-16 5.6E-21 134.2 8.6 95 1-96 359-460 (463)
26 PLN02316 synthase/transferase 99.7 3.3E-16 7.2E-21 142.4 9.6 94 1-94 924-1035(1036)
27 cd04946 GT1_AmsK_like This fam 99.7 1.7E-16 3.6E-21 133.1 6.6 87 1-87 315-406 (407)
28 KOG0853 Glycosyltransferase [C 99.7 1.2E-16 2.5E-21 135.2 5.5 96 3-99 373-474 (495)
29 PRK15179 Vi polysaccharide bio 99.6 4.5E-16 9.8E-21 137.8 7.8 91 1-91 596-692 (694)
30 cd04955 GT1_like_6 This family 99.6 6.2E-16 1.3E-20 125.4 7.3 89 1-91 272-363 (363)
31 TIGR02095 glgA glycogen/starch 99.6 7E-16 1.5E-20 131.5 7.8 91 1-92 370-472 (473)
32 cd03805 GT1_ALG2_like This fam 99.6 5.4E-16 1.2E-20 127.9 6.6 86 1-86 304-392 (392)
33 PRK14098 glycogen synthase; Pr 99.6 1E-15 2.2E-20 131.3 8.5 95 1-95 386-488 (489)
34 cd03791 GT1_Glycogen_synthase_ 99.6 8E-16 1.7E-20 130.7 7.6 91 1-91 375-475 (476)
35 cd03807 GT1_WbnK_like This fam 99.6 7.9E-16 1.7E-20 123.0 7.1 90 1-91 273-365 (365)
36 PLN02939 transferase, transfer 99.6 1.6E-15 3.6E-20 136.3 9.5 96 1-96 861-970 (977)
37 PRK09922 UDP-D-galactose:(gluc 99.6 2.4E-15 5.2E-20 123.7 9.7 94 1-95 262-358 (359)
38 cd03821 GT1_Bme6_like This fam 99.6 7.6E-16 1.7E-20 123.5 6.2 87 1-87 286-374 (375)
39 PHA01633 putative glycosyl tra 99.6 2.1E-15 4.7E-20 123.5 8.7 86 1-87 228-334 (335)
40 cd04951 GT1_WbdM_like This fam 99.6 1.9E-15 4.2E-20 122.2 8.4 91 1-91 267-359 (360)
41 cd05844 GT1_like_7 Glycosyltra 99.6 2.6E-15 5.6E-20 122.4 6.7 88 1-88 269-366 (367)
42 PLN02846 digalactosyldiacylgly 99.6 7.7E-15 1.7E-19 124.7 9.0 88 1-93 305-392 (462)
43 TIGR03087 stp1 sugar transfera 99.6 5.8E-15 1.3E-19 123.0 7.9 91 1-91 302-395 (397)
44 cd04949 GT1_gtfA_like This fam 99.6 2E-15 4.3E-20 123.9 4.7 85 1-86 283-372 (372)
45 cd03800 GT1_Sucrose_synthase T 99.6 3.1E-15 6.7E-20 122.8 5.7 87 1-87 307-397 (398)
46 cd03822 GT1_ecORF704_like This 99.6 8.1E-15 1.8E-19 118.1 7.7 89 1-91 272-366 (366)
47 cd03814 GT1_like_2 This family 99.6 7.6E-15 1.6E-19 118.0 7.0 90 1-91 271-364 (364)
48 cd03808 GT1_cap1E_like This fa 99.6 7.7E-15 1.7E-19 116.8 6.8 87 1-87 268-358 (359)
49 cd03793 GT1_Glycogen_synthase_ 99.6 8.5E-15 1.8E-19 126.2 7.3 95 1-95 479-589 (590)
50 PRK10307 putative glycosyl tra 99.5 1.6E-14 3.6E-19 120.6 7.5 95 1-96 308-411 (412)
51 cd03801 GT1_YqgM_like This fam 99.5 2.6E-14 5.6E-19 113.5 6.7 91 1-91 280-374 (374)
52 cd03809 GT1_mtfB_like This fam 99.5 1.9E-14 4.1E-19 115.9 5.7 86 1-87 277-364 (365)
53 PF13524 Glyco_trans_1_2: Glyc 99.5 4.1E-14 8.8E-19 95.0 5.9 86 2-87 4-91 (92)
54 cd03806 GT1_ALG11_like This fa 99.5 2.7E-14 5.8E-19 120.3 6.0 84 1-84 329-418 (419)
55 cd03820 GT1_amsD_like This fam 99.5 3E-14 6.5E-19 112.9 5.9 86 1-87 257-347 (348)
56 cd03799 GT1_amsK_like This is 99.5 3.7E-14 8E-19 114.5 6.3 85 1-85 260-354 (355)
57 cd03798 GT1_wlbH_like This fam 99.5 5.1E-14 1.1E-18 112.4 7.0 92 1-92 283-376 (377)
58 cd03804 GT1_wbaZ_like This fam 99.5 1.6E-13 3.5E-18 111.9 9.3 83 1-86 266-350 (351)
59 PLN02501 digalactosyldiacylgly 99.5 1.4E-13 3.1E-18 120.6 8.8 85 1-90 623-707 (794)
60 cd03819 GT1_WavL_like This fam 99.5 7.2E-14 1.6E-18 113.1 5.2 82 1-82 268-355 (355)
61 cd03812 GT1_CapH_like This fam 99.5 1.1E-13 2.3E-18 112.2 6.1 62 1-62 271-333 (358)
62 cd03795 GT1_like_4 This family 99.4 1E-13 2.2E-18 112.0 5.4 83 1-83 268-357 (357)
63 cd03823 GT1_ExpE7_like This fa 99.4 1.4E-13 3E-18 110.3 6.1 87 1-91 267-358 (359)
64 cd03794 GT1_wbuB_like This fam 99.4 7.7E-13 1.7E-17 106.4 6.0 86 1-86 299-393 (394)
65 cd03817 GT1_UGDG_like This fam 99.3 1.5E-12 3.3E-17 104.5 6.0 88 1-92 283-373 (374)
66 PF00534 Glycos_transf_1: Glyc 99.3 4.5E-13 9.7E-18 98.8 2.4 70 1-70 97-170 (172)
67 COG0438 RfaG Glycosyltransfera 99.3 1.1E-11 2.3E-16 97.2 8.5 95 1-95 281-379 (381)
68 cd03816 GT1_ALG1_like This fam 99.3 4.8E-12 1E-16 106.5 6.7 79 5-85 326-409 (415)
69 cd03811 GT1_WabH_like This fam 99.3 2.8E-12 6.1E-17 101.6 5.0 78 1-78 268-352 (353)
70 TIGR02400 trehalose_OtsA alpha 99.3 5.8E-12 1.3E-16 107.4 6.7 87 1-90 360-454 (456)
71 cd03788 GT1_TPS Trehalose-6-Ph 99.2 8.6E-12 1.9E-16 106.4 4.3 86 1-89 365-458 (460)
72 PLN02275 transferase, transfer 99.1 1.2E-10 2.7E-15 96.5 5.2 53 6-58 319-371 (371)
73 COG0297 GlgA Glycogen synthase 99.1 6.3E-10 1.4E-14 95.2 9.3 98 1-98 373-483 (487)
74 cd04950 GT1_like_1 Glycosyltra 99.1 7.8E-10 1.7E-14 91.7 8.8 81 7-91 289-370 (373)
75 PLN03063 alpha,alpha-trehalose 99.0 3.9E-10 8.5E-15 101.9 7.1 93 1-95 380-480 (797)
76 PRK05749 3-deoxy-D-manno-octul 99.0 1.7E-10 3.6E-15 97.1 3.7 92 2-96 326-423 (425)
77 PRK14501 putative bifunctional 99.0 2.3E-10 4.9E-15 102.7 3.7 91 1-95 366-465 (726)
78 TIGR03713 acc_sec_asp1 accesso 98.7 2.3E-08 5E-13 86.6 5.7 85 1-90 433-519 (519)
79 KOG1387 Glycosyltransferase [C 98.6 1.1E-07 2.5E-12 77.5 7.9 94 4-97 364-463 (465)
80 PF05693 Glycogen_syn: Glycoge 98.6 3.7E-08 8E-13 85.5 4.1 98 1-98 474-587 (633)
81 PRK13609 diacylglycerol glucos 98.6 1.2E-07 2.7E-12 78.4 6.0 85 7-92 280-371 (380)
82 PRK13608 diacylglycerol glucos 98.5 1.3E-07 2.8E-12 79.1 5.0 87 7-95 280-374 (391)
83 PF13692 Glyco_trans_1_4: Glyc 98.5 7.7E-08 1.7E-12 68.0 2.6 58 2-60 76-135 (135)
84 PLN02605 monogalactosyldiacylg 98.5 1.8E-07 3.9E-12 77.9 4.4 81 7-89 289-378 (382)
85 TIGR00236 wecB UDP-N-acetylglu 98.4 2.3E-07 5E-12 76.5 3.8 53 10-62 283-336 (365)
86 PRK00726 murG undecaprenyldiph 98.4 4.4E-07 9.6E-12 74.4 5.2 81 10-91 262-356 (357)
87 PRK09814 beta-1,6-galactofuran 98.3 5.7E-07 1.2E-11 73.6 3.4 64 8-71 248-311 (333)
88 PLN03064 alpha,alpha-trehalose 98.1 5.9E-06 1.3E-10 75.8 7.2 91 1-94 464-563 (934)
89 TIGR01133 murG undecaprenyldip 98.1 1.2E-06 2.7E-11 71.2 2.4 62 10-71 260-334 (348)
90 cd03785 GT1_MurG MurG is an N- 98.1 2.1E-06 4.5E-11 69.9 3.1 73 10-83 262-348 (350)
91 TIGR02398 gluc_glyc_Psyn gluco 98.0 1.4E-05 3.1E-10 68.8 6.9 85 1-88 386-478 (487)
92 PRK00025 lpxB lipid-A-disaccha 97.8 2.3E-05 5E-10 64.7 4.3 53 10-62 270-343 (380)
93 TIGR02919 accessory Sec system 97.6 0.00016 3.4E-09 61.8 5.9 60 2-62 353-413 (438)
94 TIGR02094 more_P_ylases alpha- 97.5 0.0012 2.6E-08 58.5 10.4 88 3-90 485-598 (601)
95 KOG2941 Beta-1,4-mannosyltrans 97.3 0.00026 5.7E-09 58.2 3.9 78 8-87 353-436 (444)
96 KOG3742 Glycogen synthase [Car 97.3 0.00015 3.2E-09 61.4 2.4 97 1-97 505-617 (692)
97 cd03786 GT1_UDP-GlcNAc_2-Epime 97.1 0.00068 1.5E-08 55.4 4.9 51 12-62 288-339 (363)
98 COG4641 Uncharacterized protei 97.0 0.0018 3.8E-08 53.7 5.9 87 9-95 276-364 (373)
99 PF00982 Glyco_transf_20: Glyc 95.9 0.029 6.2E-07 48.5 7.2 87 1-89 377-471 (474)
100 cd04299 GT1_Glycogen_Phosphory 95.9 0.035 7.6E-07 50.7 7.6 90 1-91 571-689 (778)
101 TIGR00215 lpxB lipid-A-disacch 95.1 0.039 8.5E-07 46.2 4.8 52 10-61 276-348 (385)
102 PRK10117 trehalose-6-phosphate 95.0 0.055 1.2E-06 46.7 5.7 92 1-95 356-456 (474)
103 TIGR01426 MGT glycosyltransfer 94.9 0.063 1.4E-06 44.6 5.6 79 11-89 302-389 (392)
104 PF13844 Glyco_transf_41: Glyc 94.2 0.063 1.4E-06 46.3 4.2 85 9-93 373-467 (468)
105 TIGR03568 NeuC_NnaA UDP-N-acet 93.4 0.17 3.7E-06 42.1 5.2 44 13-58 293-337 (365)
106 PF00201 UDPGT: UDP-glucoronos 92.9 0.053 1.1E-06 46.6 1.6 54 8-61 349-410 (500)
107 COG0380 OtsA Trehalose-6-phosp 92.3 0.69 1.5E-05 40.2 7.5 59 2-62 384-447 (486)
108 PF02350 Epimerase_2: UDP-N-ac 91.8 0.51 1.1E-05 39.1 6.1 49 12-60 268-318 (346)
109 TIGR03492 conserved hypothetic 91.5 0.27 5.9E-06 41.4 4.2 52 10-61 305-365 (396)
110 cd03784 GT1_Gtf_like This fami 91.4 0.26 5.7E-06 40.9 3.9 53 8-60 312-372 (401)
111 PLN02205 alpha,alpha-trehalose 91.3 0.37 8.1E-06 44.7 5.1 90 1-93 440-552 (854)
112 PLN02670 transferase, transfer 89.7 1 2.2E-05 39.0 6.2 83 10-92 367-465 (472)
113 PHA03392 egt ecdysteroid UDP-g 89.3 1 2.2E-05 39.4 5.9 55 8-62 372-434 (507)
114 COG1519 KdtA 3-deoxy-D-manno-o 89.0 0.18 3.9E-06 42.7 1.1 71 4-74 326-402 (419)
115 COG1819 Glycosyl transferases, 88.1 1 2.2E-05 38.2 5.0 80 11-90 311-399 (406)
116 PLN02410 UDP-glucoronosyl/UDP- 82.6 4.8 0.0001 34.6 6.6 52 10-61 352-411 (451)
117 PLN02992 coniferyl-alcohol glu 78.7 8.1 0.00018 33.6 6.7 52 10-61 366-428 (481)
118 PRK12446 undecaprenyldiphospho 78.7 13 0.00027 30.8 7.7 53 9-61 261-326 (352)
119 PF14851 FAM176: FAM176 family 77.6 11 0.00024 27.7 6.1 44 82-130 4-47 (153)
120 PLN03004 UDP-glycosyltransfera 77.3 3 6.5E-05 35.9 3.7 51 10-60 362-424 (451)
121 PF11167 DUF2953: Protein of u 76.5 3.1 6.7E-05 24.6 2.6 39 112-152 12-50 (53)
122 TIGR00661 MJ1255 conserved hyp 76.4 5.3 0.00012 32.3 4.8 50 11-60 258-314 (321)
123 PLN02562 UDP-glycosyltransfera 76.1 4.9 0.00011 34.5 4.7 51 10-60 356-413 (448)
124 PLN03007 UDP-glucosyltransfera 75.9 8.6 0.00019 33.3 6.1 52 10-61 373-441 (482)
125 PLN02173 UDP-glucosyl transfer 75.9 4.7 0.0001 34.7 4.5 52 9-60 344-408 (449)
126 PLN02208 glycosyltransferase f 75.4 14 0.0003 31.8 7.2 52 10-61 339-402 (442)
127 COG0707 MurG UDP-N-acetylgluco 75.2 9.9 0.00021 31.8 6.1 53 10-62 262-326 (357)
128 PF04007 DUF354: Protein of un 75.0 9.4 0.0002 31.6 5.8 52 9-60 256-310 (335)
129 COG0381 WecB UDP-N-acetylgluco 74.3 13 0.00028 31.4 6.5 79 12-93 292-371 (383)
130 COG0763 LpxB Lipid A disacchar 72.7 8.3 0.00018 32.5 5.0 23 9-31 272-295 (381)
131 PLN00414 glycosyltransferase f 72.2 9.9 0.00021 32.7 5.6 52 10-61 340-403 (446)
132 PLN02448 UDP-glycosyltransfera 71.9 41 0.00089 28.9 9.3 52 10-61 351-416 (459)
133 PLN02764 glycosyltransferase f 71.6 19 0.0004 31.2 7.1 52 10-61 345-408 (453)
134 PF13528 Glyco_trans_1_3: Glyc 71.0 7 0.00015 31.2 4.2 45 12-56 262-316 (318)
135 PF15024 Glyco_transf_18: Glyc 69.3 23 0.00051 31.4 7.2 75 11-92 355-455 (559)
136 PLN02152 indole-3-acetate beta 66.1 15 0.00033 31.7 5.4 51 10-60 355-417 (455)
137 PLN02167 UDP-glycosyltransfera 63.9 23 0.0005 30.6 6.2 50 11-60 369-434 (475)
138 PLN02210 UDP-glucosyl transfer 63.8 24 0.00052 30.4 6.2 50 11-60 353-415 (456)
139 PF02684 LpxB: Lipid-A-disacch 63.2 11 0.00025 31.6 4.0 54 8-61 267-341 (373)
140 PF06422 PDR_CDR: CDR ABC tran 62.8 15 0.00033 24.9 3.9 42 115-156 52-93 (103)
141 PLN02555 limonoid glucosyltran 62.3 23 0.0005 30.8 5.9 51 10-60 365-429 (480)
142 PLN02207 UDP-glycosyltransfera 60.7 15 0.00033 31.8 4.5 49 11-59 361-425 (468)
143 PLN02554 UDP-glycosyltransfera 58.6 18 0.0004 31.3 4.6 50 10-59 370-439 (481)
144 COG3914 Spy Predicted O-linked 55.5 23 0.0005 31.6 4.7 88 9-96 520-617 (620)
145 PF05159 Capsule_synth: Capsul 55.4 9.4 0.0002 30.1 2.2 17 10-26 208-224 (269)
146 PLN00164 glucosyltransferase; 55.0 36 0.00078 29.5 5.9 50 11-60 368-431 (480)
147 PF10649 DUF2478: Protein of u 54.1 11 0.00025 27.8 2.3 21 7-27 110-130 (159)
148 PLN02863 UDP-glucoronosyl/UDP- 53.1 39 0.00084 29.4 5.7 50 10-59 371-432 (477)
149 PRK01021 lpxB lipid-A-disaccha 50.9 22 0.00047 32.0 3.9 22 8-29 495-517 (608)
150 COG4307 Uncharacterized protei 50.5 98 0.0021 25.1 7.1 43 75-117 180-225 (349)
151 PF04312 DUF460: Protein of un 49.2 30 0.00064 25.0 3.7 25 12-36 68-93 (138)
152 PF00852 Glyco_transf_10: Glyc 48.8 26 0.00056 29.1 3.8 50 12-61 246-299 (349)
153 PF03016 Exostosin: Exostosin 48.7 12 0.00025 29.7 1.7 20 8-27 248-268 (302)
154 PF04101 Glyco_tran_28_C: Glyc 44.9 20 0.00044 25.8 2.4 52 10-61 82-145 (167)
155 PF11238 DUF3039: Protein of u 44.4 18 0.00038 22.1 1.6 15 12-26 16-30 (58)
156 PF09753 Use1: Membrane fusion 42.0 1.6E+02 0.0035 23.0 7.3 24 102-125 215-239 (251)
157 COG1817 Uncharacterized protei 39.3 64 0.0014 26.8 4.6 53 9-61 260-315 (346)
158 PF15202 Adipogenin: Adipogeni 39.0 1E+02 0.0022 19.5 4.5 15 137-151 44-58 (81)
159 smart00672 CAP10 Putative lipo 37.8 87 0.0019 24.8 5.2 78 15-92 163-248 (256)
160 KOG1192 UDP-glucuronosyl and U 37.4 44 0.00095 28.5 3.7 51 12-62 366-424 (496)
161 PF13407 Peripla_BP_4: Peripla 37.3 81 0.0018 23.9 4.9 27 3-29 63-89 (257)
162 COG3647 Predicted membrane pro 35.2 1.5E+02 0.0032 22.2 5.6 40 100-139 117-157 (205)
163 COG0058 GlgP Glucan phosphoryl 34.9 1E+02 0.0022 28.6 5.6 41 5-45 587-629 (750)
164 PF04464 Glyphos_transf: CDP-G 34.8 60 0.0013 26.6 4.0 51 10-61 278-337 (369)
165 KOG1021 Acetylglucosaminyltran 34.0 1.5E+02 0.0033 25.6 6.4 27 2-28 349-376 (464)
166 PF13263 PHP_C: PHP-associated 32.9 18 0.0004 21.4 0.5 43 13-55 8-52 (56)
167 PRK02797 4-alpha-L-fucosyltran 30.6 2.4E+02 0.0052 23.4 6.6 80 6-96 237-320 (322)
168 COG1983 PspC Putative stress-r 30.1 98 0.0021 19.6 3.4 41 101-141 17-64 (70)
169 PF08507 COPI_assoc: COPI asso 29.8 1.6E+02 0.0035 20.7 5.0 25 116-140 88-112 (136)
170 PRK06569 F0F1 ATP synthase sub 28.4 72 0.0016 23.5 3.0 25 115-139 10-34 (155)
171 PF13169 Poxvirus_B22R_N: Poxv 28.3 1.7E+02 0.0038 19.5 4.6 30 69-98 42-71 (92)
172 COG0052 RpsB Ribosomal protein 27.1 78 0.0017 25.2 3.2 25 11-35 170-195 (252)
173 COG1879 RbsB ABC-type sugar tr 26.9 2.1E+02 0.0045 22.7 5.8 32 2-33 98-129 (322)
174 COG1830 FbaB DhnA-type fructos 26.8 83 0.0018 25.3 3.3 18 6-26 191-208 (265)
175 PF15586 Imm47: Immunity prote 26.0 2E+02 0.0044 19.9 4.8 36 73-108 72-107 (116)
176 PF01102 Glycophorin_A: Glycop 25.8 75 0.0016 22.4 2.6 10 137-146 92-101 (122)
177 PF10999 DUF2839: Protein of u 25.6 94 0.002 19.6 2.8 14 104-117 35-48 (68)
178 PF06345 Drf_DAD: DRF Autoregu 25.4 64 0.0014 13.8 1.3 10 12-21 5-14 (15)
179 KOG3894 SNARE protein Syntaxin 25.2 1.3E+02 0.0028 24.8 4.1 37 102-138 280-316 (316)
180 KOG1053 Glutamate-gated NMDA-t 24.9 87 0.0019 29.8 3.4 25 116-140 568-592 (1258)
181 PF10856 DUF2678: Protein of u 24.8 47 0.001 23.2 1.4 29 118-148 63-91 (118)
182 PRK14472 F0F1 ATP synthase sub 24.7 87 0.0019 23.1 3.0 27 112-138 15-41 (175)
183 PF05686 Glyco_transf_90: Glyc 24.5 1E+02 0.0022 26.1 3.7 83 13-95 230-323 (395)
184 PRK09174 F0F1 ATP synthase sub 24.3 72 0.0016 24.4 2.5 25 115-139 53-77 (204)
185 KOG1050 Trehalose-6-phosphate 23.9 3.4E+02 0.0074 25.2 7.0 61 2-62 378-442 (732)
186 PRK10017 colanic acid biosynth 23.8 1.5E+02 0.0032 25.5 4.5 51 12-62 338-394 (426)
187 PLN03015 UDP-glucosyl transfer 23.7 64 0.0014 28.1 2.4 50 10-59 363-425 (470)
188 PF10767 DUF2593: Protein of u 23.1 99 0.0022 22.3 2.8 22 118-139 80-101 (144)
189 PF03918 CcmH: Cytochrome C bi 22.4 88 0.0019 22.7 2.5 67 66-139 63-130 (148)
190 TIGR00746 arcC carbamate kinas 22.2 2.4E+02 0.0051 23.2 5.2 49 12-60 174-224 (310)
191 PLN02534 UDP-glycosyltransfera 22.1 76 0.0016 27.8 2.5 22 8-29 370-391 (491)
192 KOG4677 Golgi integral membran 22.1 1.9E+02 0.004 25.3 4.7 34 104-137 516-549 (554)
193 PRK13453 F0F1 ATP synthase sub 21.5 1.1E+02 0.0023 22.6 2.9 27 112-138 15-41 (173)
194 PF00863 Peptidase_C4: Peptida 21.3 50 0.0011 26.0 1.1 13 18-30 152-164 (235)
195 KOG2619 Fucosyltransferase [Ca 21.3 1.3E+02 0.0027 25.5 3.5 46 15-61 272-320 (372)
196 PRK14471 F0F1 ATP synthase sub 21.1 1.2E+02 0.0025 22.1 3.0 24 116-139 9-32 (164)
197 PF08172 CASP_C: CASP C termin 21.0 4E+02 0.0088 21.1 6.2 55 82-136 168-239 (248)
198 PRK14986 glycogen phosphorylas 20.6 99 0.0022 29.0 3.0 48 6-53 653-703 (815)
199 COG0711 AtpF F0F1-type ATP syn 20.1 1.3E+02 0.0028 22.0 3.1 22 118-139 9-30 (161)
No 1
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.97 E-value=4.8e-32 Score=217.93 Aligned_cols=148 Identities=53% Similarity=0.841 Sum_probs=136.8
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWH 80 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~~~~~~~~~~~v~~~fsw~ 80 (169)
+.||++|+||++++|||+||+|||+|++||++|+++++...+.+++++++++++++++...+. .....++++++.|+|+
T Consensus 276 lntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~~~~-~p~~~h~~v~~~y~w~ 354 (426)
T KOG1111|consen 276 LNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITKLRT-LPLEFHDRVKKMYSWK 354 (426)
T ss_pred eccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHHhcc-CchhHHHHHHHhccHH
Confidence 479999999999999999999999999999999999996667788999999999999987652 2577889999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCcHHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCC
Q 030899 81 DVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLWRFLELWKPAEDIEEVPDIVL 150 (169)
Q Consensus 81 ~~a~~~~~vy~~i~~~~~~~~~~rl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~~ 150 (169)
+++++++++|.++...+..+..+|+++++.+|.+ |++++++..+.|+++++|+|++||+++|.||||++
T Consensus 355 dVa~rTekvy~r~~~t~~~~~~~r~~~~~~~g~~-g~~~~v~~~i~~ll~~Ll~l~~p~~~v~~a~~~~~ 423 (426)
T KOG1111|consen 355 DVAERTEKVYDRAATTSIRNEQDRLKIWLYRGVG-GKLFHVLGPINYLLKRLLELPEPRGNVEIAPDVQR 423 (426)
T ss_pred HHHHHHHHHHHHHhhccCcCHHHHHHHHhhccCC-ceEEEEehHHHHHHHHHhcccCcccccccCccccc
Confidence 9999999999999999999999999999888777 99999999999999999999999999999999953
No 2
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.92 E-value=1.5e-25 Score=186.57 Aligned_cols=122 Identities=66% Similarity=1.093 Sum_probs=111.6
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYN 78 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~fs 78 (169)
++||..|+||++++|||+||+|||+|++||.+|++.++.+++..+|+++++++|.+++++.. ..+..++++.+.++||
T Consensus 274 v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs 353 (398)
T cd03796 274 LNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILLAEPDVESIVRKLEEAISILRTGKHDPWSFHNRVKKMYS 353 (398)
T ss_pred EeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCceeecCCCHHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCC
Confidence 47999999999999999999999999999999999988777777799999999999998754 3467888888999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHccCchHHHHHHHH
Q 030899 79 WHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLV 122 (169)
Q Consensus 79 w~~~a~~~~~vy~~i~~~~~~~~~~rl~~~~~~g~~~~~~~~~~ 122 (169)
|+.+++++.++|++++........+|+++||+|||.+|++||++
T Consensus 354 ~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (398)
T cd03796 354 WEDVAKRTEKVYDRILQTPNLSLLERLKRYYSCGPIAGKIFCLL 397 (398)
T ss_pred HHHHHHHHHHHHHHHhcCCCcchHHhhhhhcccCcccceeEEee
Confidence 99999999999999998888888999999999999999999875
No 3
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.76 E-value=7.6e-19 Score=148.46 Aligned_cols=90 Identities=26% Similarity=0.388 Sum_probs=81.5
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKL 76 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~ 76 (169)
|+||.+|+||++++||||||+|||+|++||++|++.++.++ ++++ |+++++++|.++++++. ..++.++++++.++
T Consensus 345 v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~ 424 (439)
T TIGR02472 345 VNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNGIEGVRRH 424 (439)
T ss_pred ecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999999988655 4555 99999999999998865 67888999999999
Q ss_pred CCHHHHHHHHHHHH
Q 030899 77 YNWHDVAKRTEIVY 90 (169)
Q Consensus 77 fsw~~~a~~~~~vy 90 (169)
|||+.+++++++++
T Consensus 425 fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 425 YSWDAHVEKYLRIL 438 (439)
T ss_pred CCHHHHHHHHHHHh
Confidence 99999999999875
No 4
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.76 E-value=1.5e-18 Score=142.66 Aligned_cols=93 Identities=26% Similarity=0.376 Sum_probs=83.5
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKL 76 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~ 76 (169)
|+||..||||++++|||+||+|||+|++||.+|++.++.++ ++++ |++++++++.+++++++ ..++.++++.+.++
T Consensus 277 v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~ 356 (374)
T TIGR03088 277 VLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQ 356 (374)
T ss_pred EeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999999988655 4554 89999999999988765 56778888999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q 030899 77 YNWHDVAKRTEIVYDRA 93 (169)
Q Consensus 77 fsw~~~a~~~~~vy~~i 93 (169)
|||+.+++++.++|+++
T Consensus 357 fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 357 FSINAMVAAYAGLYDQL 373 (374)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999999876
No 5
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.75 E-value=1.8e-18 Score=145.09 Aligned_cols=92 Identities=14% Similarity=0.158 Sum_probs=75.1
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCC-CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYN 78 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~-d~~~la~~i~~li~~~~-~~~~~~~~~~v~~~fs 78 (169)
|+||..|+||++++||||||+|||+|++||++|++.++.+.++++ |+++|++.+...+.+.. .....++++++.++||
T Consensus 311 V~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~~~~~~~~~~r~~~~~~fs 390 (405)
T PRK10125 311 VFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQAVFGTTLAEFSQRSRAAYS 390 (405)
T ss_pred EECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHHhhhhHHHHHHHHHHHhCC
Confidence 589999999999999999999999999999999998775556666 89999986543332211 1123557888889999
Q ss_pred HHHHHHHHHHHHHH
Q 030899 79 WHDVAKRTEIVYDR 92 (169)
Q Consensus 79 w~~~a~~~~~vy~~ 92 (169)
|+.++++|.++|++
T Consensus 391 ~~~~~~~y~~lY~~ 404 (405)
T PRK10125 391 GQQMLEEYVNFYQN 404 (405)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999975
No 6
>PHA01630 putative group 1 glycosyl transferase
Probab=99.73 E-value=8.6e-18 Score=137.69 Aligned_cols=92 Identities=23% Similarity=0.265 Sum_probs=77.5
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEE---------------------eCCCHHHHHHHHHHHHh
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVL---------------------AEPDPGDMVLAIRKAIS 59 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l---------------------~~~d~~~la~~i~~li~ 59 (169)
|+||..|+||++++||||||+|||+|++||.+|++.++.+++ +++|.+++++++.+++.
T Consensus 214 v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~ 293 (331)
T PHA01630 214 FYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALA 293 (331)
T ss_pred EECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHHh
Confidence 579999999999999999999999999999999998875432 35588899999989888
Q ss_pred cC--C--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 030899 60 LL--P--KIDPQVMHERMKKLYNWHDVAKRTEIVYDR 92 (169)
Q Consensus 60 ~~--~--~~~~~~~~~~v~~~fsw~~~a~~~~~vy~~ 92 (169)
+. + ..+..++.+.+.++|||+.++++++++|++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 294 NWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 74 2 444556667778999999999999999964
No 7
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.73 E-value=7.3e-18 Score=152.87 Aligned_cols=96 Identities=21% Similarity=0.222 Sum_probs=85.3
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKL 76 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~ 76 (169)
|+||++|+||++++||||||+|||+|++||++|++.++.+| ++++ |+++++++|.++++++. ..++.++++.+. +
T Consensus 576 V~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~-~ 654 (1050)
T TIGR02468 576 INPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGLKNIH-L 654 (1050)
T ss_pred eCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH-H
Confidence 57999999999999999999999999999999999988655 5666 99999999999998866 678888888875 5
Q ss_pred CCHHHHHHHHHHHHHHHHcCC
Q 030899 77 YNWHDVAKRTEIVYDRALECP 97 (169)
Q Consensus 77 fsw~~~a~~~~~vy~~i~~~~ 97 (169)
|+|+.++++|.+.|..+..+.
T Consensus 655 FSWe~ia~~yl~~i~~~~~~~ 675 (1050)
T TIGR02468 655 FSWPEHCKTYLSRIASCRPRH 675 (1050)
T ss_pred CCHHHHHHHHHHHHHHHhccC
Confidence 999999999999999887544
No 8
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.73 E-value=7.7e-18 Score=139.96 Aligned_cols=94 Identities=20% Similarity=0.367 Sum_probs=83.4
Q ss_pred CcCCC-CCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEE-e-CC-CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHh
Q 030899 1 MLNSL-TEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVL-A-EP-DPGDMVLAIRKAISLLP-KIDPQVMHERMKK 75 (169)
Q Consensus 1 v~pS~-~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l-~-~~-d~~~la~~i~~li~~~~-~~~~~~~~~~v~~ 75 (169)
|+||. .|+||++++|||+||+|||+|+.||++|++.++.+|+ + ++ |+++++++|.++++++. ..+++++++.+.+
T Consensus 281 v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~~~~~~~ar~~~~~ 360 (380)
T PRK15484 281 VVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPELTQIAEQAKDFVFS 360 (380)
T ss_pred EeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 47897 5999999999999999999999999999999987664 3 44 99999999999998876 5678888889999
Q ss_pred cCCHHHHHHHHHHHHHHHH
Q 030899 76 LYNWHDVAKRTEIVYDRAL 94 (169)
Q Consensus 76 ~fsw~~~a~~~~~vy~~i~ 94 (169)
+|||+.++++++++|++..
T Consensus 361 ~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 361 KYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred hCCHHHHHHHHHHHHHHhc
Confidence 9999999999999998653
No 9
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.73 E-value=5.4e-18 Score=150.67 Aligned_cols=90 Identities=27% Similarity=0.364 Sum_probs=79.6
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHh----cCC--CCCHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAIS----LLP--KIDPQVMHER 72 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~----~~~--~~~~~~~~~~ 72 (169)
|+||++|+||++++|||+||+|||+|++||++|++.++.+| ++++ |+++++++|.++++ ++. ..++.+++++
T Consensus 648 V~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~r 727 (784)
T TIGR02470 648 VQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQR 727 (784)
T ss_pred EECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999998766 4555 89999999998874 333 6678888999
Q ss_pred HHhcCCHHHHHHHHHHHH
Q 030899 73 MKKLYNWHDVAKRTEIVY 90 (169)
Q Consensus 73 v~~~fsw~~~a~~~~~vy 90 (169)
+.++|||+.+++++.++.
T Consensus 728 V~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 728 IYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHhCCHHHHHHHHHHHH
Confidence 999999999999998875
No 10
>PLN00142 sucrose synthase
Probab=99.72 E-value=7.5e-18 Score=150.02 Aligned_cols=90 Identities=24% Similarity=0.340 Sum_probs=79.2
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHh----cCC--CCCHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAIS----LLP--KIDPQVMHER 72 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~----~~~--~~~~~~~~~~ 72 (169)
|+||++|+||++++|||+||+|||+|++||++|++.++.+| ++++ |+++++++|.+++. ++. ..++++++++
T Consensus 671 VlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~r 750 (815)
T PLN00142 671 VQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQR 750 (815)
T ss_pred EeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999766 4555 89999999987653 433 6788899999
Q ss_pred HHhcCCHHHHHHHHHHHH
Q 030899 73 MKKLYNWHDVAKRTEIVY 90 (169)
Q Consensus 73 v~~~fsw~~~a~~~~~vy 90 (169)
+.++|||+.+++++.++-
T Consensus 751 v~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 751 IYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHhCCHHHHHHHHHHHH
Confidence 999999999999999875
No 11
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.71 E-value=1.6e-17 Score=139.42 Aligned_cols=92 Identities=21% Similarity=0.261 Sum_probs=82.5
Q ss_pred CcCCCC------CcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHh-cCC--CCCHHHH
Q 030899 1 MLNSLT------EAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAIS-LLP--KIDPQVM 69 (169)
Q Consensus 1 v~pS~~------E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~-~~~--~~~~~~~ 69 (169)
|+||.. ||||++++|||+||+|||+|++||++|++.++.+| ++++ |+++++++|.++++ +++ ..++.++
T Consensus 303 v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~a 382 (406)
T PRK15427 303 LLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRA 382 (406)
T ss_pred EECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 468874 99999999999999999999999999999998666 4554 89999999999998 765 6788999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHH
Q 030899 70 HERMKKLYNWHDVAKRTEIVYDR 92 (169)
Q Consensus 70 ~~~v~~~fsw~~~a~~~~~vy~~ 92 (169)
++.+.++|+|+.+++++.++|++
T Consensus 383 r~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 383 REKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHhcCHHHHHHHHHHHHhh
Confidence 99999999999999999999975
No 12
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.71 E-value=1.5e-17 Score=137.06 Aligned_cols=92 Identities=15% Similarity=0.149 Sum_probs=83.5
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYN 78 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~fs 78 (169)
++||.+||||++++|||+||+|||+|+.||.++++.++.+++..++.++++.+|.+++.+++ ..+++++++.+.++|+
T Consensus 278 v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s 357 (372)
T cd03792 278 LQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVDTVEEAAVRILYLLRDPELRRKMGANAREHVRENFL 357 (372)
T ss_pred EeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeCCcHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcC
Confidence 47999999999999999999999999999999999998888777788899999999998755 6778888898889999
Q ss_pred HHHHHHHHHHHHHH
Q 030899 79 WHDVAKRTEIVYDR 92 (169)
Q Consensus 79 w~~~a~~~~~vy~~ 92 (169)
|+.+++++.++|++
T Consensus 358 ~~~~~~~~~~~~~~ 371 (372)
T cd03792 358 ITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999986
No 13
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.70 E-value=2.4e-17 Score=135.75 Aligned_cols=94 Identities=28% Similarity=0.446 Sum_probs=82.9
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEE-eCC-CH------HHHHHHHHHHHhcCC--CCCHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVL-AEP-DP------GDMVLAIRKAISLLP--KIDPQVMH 70 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l-~~~-d~------~~la~~i~~li~~~~--~~~~~~~~ 70 (169)
|+||.+|+||++++|||+||+|||+|+.||.+|++.++.+|+ +++ |+ ++++++|.++++++. ..++.+++
T Consensus 285 v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~ 364 (388)
T TIGR02149 285 VCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGR 364 (388)
T ss_pred EeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999886554 444 66 899999999998765 56788888
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHH
Q 030899 71 ERMKKLYNWHDVAKRTEIVYDRAL 94 (169)
Q Consensus 71 ~~v~~~fsw~~~a~~~~~vy~~i~ 94 (169)
+.+.++|||+.+++++.++|++++
T Consensus 365 ~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 365 KRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred HHHHHhCCHHHHHHHHHHHHHhhC
Confidence 989999999999999999998763
No 14
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.69 E-value=6.9e-17 Score=137.60 Aligned_cols=95 Identities=22% Similarity=0.359 Sum_probs=76.7
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCC------ceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDD------MVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMH 70 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~------~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~ 70 (169)
|+||++|+||++++|||+||+|+|+|++||++|++.++ .+| ++++ |+++++++|.++++... ....+...
T Consensus 361 v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 440 (466)
T PRK00654 361 LMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQR 440 (466)
T ss_pred EeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 57999999999999999999999999999999999876 555 4555 89999999999887422 11222233
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHc
Q 030899 71 ERMKKLYNWHDVAKRTEIVYDRALE 95 (169)
Q Consensus 71 ~~v~~~fsw~~~a~~~~~vy~~i~~ 95 (169)
+.+.+.|||+.+++++.++|+++++
T Consensus 441 ~~~~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 441 QAMAQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHhccCCChHHHHHHHHHHHHHHhh
Confidence 3345789999999999999998864
No 15
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.69 E-value=5.7e-17 Score=134.70 Aligned_cols=94 Identities=27% Similarity=0.388 Sum_probs=81.4
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEE-eCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVL-AEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKL 76 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l-~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~ 76 (169)
++||..|+||++++|||++|+|||+|+.||.+|++.++.+++ +++ |+++++++|.+++++++ ..++.++++.+ ++
T Consensus 307 v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~-~~ 385 (405)
T TIGR03449 307 AVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVEHA-AG 385 (405)
T ss_pred EECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-Hh
Confidence 579999999999999999999999999999999999886654 454 89999999999998755 45666677665 67
Q ss_pred CCHHHHHHHHHHHHHHHHc
Q 030899 77 YNWHDVAKRTEIVYDRALE 95 (169)
Q Consensus 77 fsw~~~a~~~~~vy~~i~~ 95 (169)
|||+.+++++.++|.+++.
T Consensus 386 fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 386 FSWAATADGLLSSYRDALA 404 (405)
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 9999999999999998763
No 16
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.68 E-value=7e-17 Score=137.38 Aligned_cols=95 Identities=22% Similarity=0.414 Sum_probs=83.4
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccC---CceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPD---DMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERM 73 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~---~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v 73 (169)
|+||..|+||++++|||+||+|||+|+.||++|++.+ +.+| ++++ |+++++++|.++++++. ..+++++++.+
T Consensus 336 V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 415 (465)
T PLN02871 336 VMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRERMGAAAREEV 415 (465)
T ss_pred EECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999998 6655 4554 89999999999998765 66788888876
Q ss_pred HhcCCHHHHHHHHHH-HHHHHHcC
Q 030899 74 KKLYNWHDVAKRTEI-VYDRALEC 96 (169)
Q Consensus 74 ~~~fsw~~~a~~~~~-vy~~i~~~ 96 (169)
++|||+.+++++++ +|++++..
T Consensus 416 -~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 416 -EKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred -HhCCHHHHHHHHHHHHHHHHHHH
Confidence 56999999999998 79998865
No 17
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.68 E-value=7.2e-17 Score=131.69 Aligned_cols=92 Identities=24% Similarity=0.359 Sum_probs=82.1
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEE-eCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVL-AEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKL 76 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l-~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~ 76 (169)
|+||..|+||++++|||+||+|||+|+.||.+|++.++.+|+ +++ |++++++++.++++++. ..++.++++.+.++
T Consensus 275 v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 354 (371)
T cd04962 275 LLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAARNRAAER 354 (371)
T ss_pred EeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 579999999999999999999999999999999999976554 454 89999999999998765 56788888888899
Q ss_pred CCHHHHHHHHHHHHHH
Q 030899 77 YNWHDVAKRTEIVYDR 92 (169)
Q Consensus 77 fsw~~~a~~~~~vy~~ 92 (169)
|||+.+++++.++|++
T Consensus 355 fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 355 FDSERIVPQYEALYRR 370 (371)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999999999975
No 18
>PRK14099 glycogen synthase; Provisional
Probab=99.68 E-value=8.7e-17 Score=137.79 Aligned_cols=93 Identities=20% Similarity=0.259 Sum_probs=74.6
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCC---------ceE-EeCC-CHHHHHHHHHHH---HhcCC--CC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDD---------MVV-LAEP-DPGDMVLAIRKA---ISLLP--KI 64 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~---------~~~-l~~~-d~~~la~~i~~l---i~~~~--~~ 64 (169)
|+||++|+||++++|||+||+|+|+|++||++|++.++ .+| ++++ |+++++++|.++ ++++. ..
T Consensus 374 v~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~ 453 (485)
T PRK14099 374 LVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRR 453 (485)
T ss_pred EECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHH
Confidence 57999999999999999999988889999999998764 344 4555 999999999974 44432 33
Q ss_pred CHHHHHHHHHhcCCHHHHHHHHHHHHHHHHcC
Q 030899 65 DPQVMHERMKKLYNWHDVAKRTEIVYDRALEC 96 (169)
Q Consensus 65 ~~~~~~~~v~~~fsw~~~a~~~~~vy~~i~~~ 96 (169)
+.+++ ..+.|||+.++++++++|++++..
T Consensus 454 l~~~~---~~~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 454 LQRNG---MTTDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred HHHHh---hhhcCChHHHHHHHHHHHHHHHhh
Confidence 34433 357899999999999999998754
No 19
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.68 E-value=5.8e-17 Score=138.37 Aligned_cols=91 Identities=23% Similarity=0.350 Sum_probs=81.8
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccC------CceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPD------DMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMH 70 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~------~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~ 70 (169)
|+||..||||++++|||+||+|||+|++||.+|++.+ +.+| ++++ |+++++++|.++++++. ..++++++
T Consensus 375 vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a~ 454 (475)
T cd03813 375 VLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPELRRAMGEAGR 454 (475)
T ss_pred EeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999988 3344 5555 89999999999998866 67889999
Q ss_pred HHHHhcCCHHHHHHHHHHHHH
Q 030899 71 ERMKKLYNWHDVAKRTEIVYD 91 (169)
Q Consensus 71 ~~v~~~fsw~~~a~~~~~vy~ 91 (169)
+++.+.|+|+.++++|.++|+
T Consensus 455 ~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 455 KRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred HHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999999984
No 20
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.67 E-value=1.9e-16 Score=127.20 Aligned_cols=87 Identities=23% Similarity=0.404 Sum_probs=75.7
Q ss_pred CcCCC-CCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCH
Q 030899 1 MLNSL-TEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNW 79 (169)
Q Consensus 1 v~pS~-~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~~~~~~~~~~~v~~~fsw 79 (169)
++||. .|+||++++|||+||+|||+|+.||.+|++.++.+++..+++++++++|.++.+. ...++++.+.++|||
T Consensus 248 v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~~~~l~~~l~~l~~~----~~~~~~~~~~~~~s~ 323 (335)
T cd03802 248 LFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDSVEELAAAVARADRL----DRAACRRRAERRFSA 323 (335)
T ss_pred EeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCCHHHHHHHHHHHhcc----HHHHHHHHHHHhCCH
Confidence 46887 6999999999999999999999999999999986666555699999999988653 346677888999999
Q ss_pred HHHHHHHHHHHH
Q 030899 80 HDVAKRTEIVYD 91 (169)
Q Consensus 80 ~~~a~~~~~vy~ 91 (169)
+.+++++.++|+
T Consensus 324 ~~~~~~~~~~y~ 335 (335)
T cd03802 324 ARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHHhC
Confidence 999999999984
No 21
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.67 E-value=1.2e-16 Score=137.43 Aligned_cols=92 Identities=17% Similarity=0.160 Sum_probs=75.8
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEE-eCC-CHHHHHHHHH---HHHhcCC--CCCHHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVL-AEP-DPGDMVLAIR---KAISLLP--KIDPQVMHERM 73 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l-~~~-d~~~la~~i~---~li~~~~--~~~~~~~~~~v 73 (169)
|+||.+||||++++|||+||+|||+|++||.+|++.++.+|+ +++ |++++++++. ++..... ..++.++++++
T Consensus 477 VlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V 556 (578)
T PRK15490 477 ILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFL 556 (578)
T ss_pred EEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999987765 444 6777776653 2333222 34668899999
Q ss_pred HhcCCHHHHHHHHHHHHHH
Q 030899 74 KKLYNWHDVAKRTEIVYDR 92 (169)
Q Consensus 74 ~~~fsw~~~a~~~~~vy~~ 92 (169)
.++|||+.++++|.++|..
T Consensus 557 ~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 557 QERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HhhCCHHHHHHHHHHHHHh
Confidence 9999999999999999974
No 22
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.67 E-value=6.9e-17 Score=138.83 Aligned_cols=91 Identities=14% Similarity=0.131 Sum_probs=76.3
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCC-CCCccccCCceEE-eCC-----C----HHHHHHHHHHHHhcCC-CCCHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVG-GVPEVLPDDMVVL-AEP-----D----PGDMVLAIRKAISLLP-KIDPQV 68 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~g-g~~evl~~~~~~l-~~~-----d----~~~la~~i~~li~~~~-~~~~~~ 68 (169)
|+||..||||++++||||||+|||+|+++ |.+|++.++.+|+ +++ | +++++++|.+++++.. ..++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~~~~~~~~~~~ 476 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFNSNDIDAFHEY 476 (500)
T ss_pred EEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 57999999999999999999999999986 8999999987664 441 2 7889999999985333 567777
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHH
Q 030899 69 MHERMKKLYNWHDVAKRTEIVYDR 92 (169)
Q Consensus 69 ~~~~v~~~fsw~~~a~~~~~vy~~ 92 (169)
+++. .+.|||+.+++++.+++++
T Consensus 477 a~~~-a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 477 SYQI-AEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred HHHH-HHhcCHHHHHHHHHHHHhh
Confidence 7775 5679999999999999875
No 23
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.67 E-value=1.4e-16 Score=129.06 Aligned_cols=92 Identities=27% Similarity=0.403 Sum_probs=82.2
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKL 76 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~ 76 (169)
++||..|+||++++|||+||+|||+++.||..|++.++.++ ++++ |++++++++.+++++++ ..++.++++.+.++
T Consensus 269 l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 348 (365)
T cd03825 269 VVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPDEREELGEAARELAENE 348 (365)
T ss_pred EeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 47999999999999999999999999999999999988555 4444 89999999999998765 66778888888899
Q ss_pred CCHHHHHHHHHHHHHH
Q 030899 77 YNWHDVAKRTEIVYDR 92 (169)
Q Consensus 77 fsw~~~a~~~~~vy~~ 92 (169)
|||+.+++++.++|++
T Consensus 349 ~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 349 FDSRVQAKRYLSLYEE 364 (365)
T ss_pred cCHHHHHHHHHHHHhh
Confidence 9999999999999986
No 24
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.66 E-value=1.4e-16 Score=132.61 Aligned_cols=87 Identities=18% Similarity=0.181 Sum_probs=78.3
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEE-eCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVL-AEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKL 76 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l-~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~ 76 (169)
++||..|+||++++||||||+|||+|+.||++|++.++.+++ +++ |+++++++|.+++++++ ..+++++++.+.++
T Consensus 305 v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~ 384 (396)
T cd03818 305 VYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRY 384 (396)
T ss_pred EEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 479999999999999999999999999999999999986664 444 89999999999999865 67889999999999
Q ss_pred CCHHHHHHHHH
Q 030899 77 YNWHDVAKRTE 87 (169)
Q Consensus 77 fsw~~~a~~~~ 87 (169)
|||+.+++++.
T Consensus 385 fs~~~~~~~~~ 395 (396)
T cd03818 385 DLLSVCLPRQL 395 (396)
T ss_pred ccHHHHHHHHh
Confidence 99999999875
No 25
>PLN02949 transferase, transferring glycosyl groups
Probab=99.66 E-value=2.6e-16 Score=134.17 Aligned_cols=95 Identities=12% Similarity=0.167 Sum_probs=81.0
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCC-ccccC---CceEEeCCCHHHHHHHHHHHHhcC-C--CCCHHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVP-EVLPD---DMVVLAEPDPGDMVLAIRKAISLL-P--KIDPQVMHERM 73 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~-evl~~---~~~~l~~~d~~~la~~i~~li~~~-~--~~~~~~~~~~v 73 (169)
++||..|+||++++|||+||+|||+++.||.. |++.+ +.+|+..+|+++++++|.+++++. . ..++.++++++
T Consensus 359 v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~ 438 (463)
T PLN02949 359 LHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLATTVEEYADAILEVLRMRETERLEIAAAARKRA 438 (463)
T ss_pred EeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999975 67654 455666679999999999999853 2 56788888887
Q ss_pred HhcCCHHHHHHHHHHHHHHHHcC
Q 030899 74 KKLYNWHDVAKRTEIVYDRALEC 96 (169)
Q Consensus 74 ~~~fsw~~~a~~~~~vy~~i~~~ 96 (169)
++|||+.+++++.+.|+++++.
T Consensus 439 -~~FS~e~~~~~~~~~i~~l~~~ 460 (463)
T PLN02949 439 -NRFSEQRFNEDFKDAIRPILNS 460 (463)
T ss_pred -HHcCHHHHHHHHHHHHHHHHhh
Confidence 5599999999999999988764
No 26
>PLN02316 synthase/transferase
Probab=99.66 E-value=3.3e-16 Score=142.37 Aligned_cols=94 Identities=20% Similarity=0.225 Sum_probs=81.0
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCC-------------ceE-EeCC-CHHHHHHHHHHHHhcCC---
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDD-------------MVV-LAEP-DPGDMVLAIRKAISLLP--- 62 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~-------------~~~-l~~~-d~~~la~~i~~li~~~~--- 62 (169)
|+||++|+||++.+|||+||+|+|++++||++|++.++ .+| ++++ |+++++.+|.+++....
T Consensus 924 lmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~ 1003 (1036)
T PLN02316 924 LVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGR 1003 (1036)
T ss_pred EeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhH
Confidence 57999999999999999999999999999999999873 345 4455 89999999999998642
Q ss_pred CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 030899 63 KIDPQVMHERMKKLYNWHDVAKRTEIVYDRAL 94 (169)
Q Consensus 63 ~~~~~~~~~~v~~~fsw~~~a~~~~~vy~~i~ 94 (169)
..+...+++.+.+.|||+.++++|+++|+.+.
T Consensus 1004 ~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1004 DWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 34566777778889999999999999999875
No 27
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.65 E-value=1.7e-16 Score=133.09 Aligned_cols=87 Identities=23% Similarity=0.309 Sum_probs=77.6
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHh
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKK 75 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~--d~~~la~~i~~li~~~~--~~~~~~~~~~v~~ 75 (169)
++||.+||||++++|||+||+|||+|++||.+|++.++.+| ++++ |+++++++|.++++++. ..+++++++.+.+
T Consensus 315 v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~ 394 (407)
T cd04946 315 VNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEE 394 (407)
T ss_pred EeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999998555 4543 78999999999998766 7789999999999
Q ss_pred cCCHHHHHHHHH
Q 030899 76 LYNWHDVAKRTE 87 (169)
Q Consensus 76 ~fsw~~~a~~~~ 87 (169)
+|+|+...+++.
T Consensus 395 ~f~~~~~~~~~~ 406 (407)
T cd04946 395 NFNASKNYREFA 406 (407)
T ss_pred HcCHHHhHHHhc
Confidence 999999988764
No 28
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.65 E-value=1.2e-16 Score=135.16 Aligned_cols=96 Identities=24% Similarity=0.354 Sum_probs=85.0
Q ss_pred CCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCCCHH---HHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 030899 3 NSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEPDPG---DMVLAIRKAISLLP--KIDPQVMHERMKKL 76 (169)
Q Consensus 3 pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~d~~---~la~~i~~li~~~~--~~~~~~~~~~v~~~ 76 (169)
|.. |+||++++|||+||+|||+|+.||..|++.++.+| +++++.+ .+++++.++..+++ ..++.++++++.++
T Consensus 373 Pa~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~ 451 (495)
T KOG0853|consen 373 PAN-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDPGQEAVAELADALLKLRRDPELWARMGKNGLKRVKEM 451 (495)
T ss_pred CCC-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 555 99999999999999999999999999999999777 5667766 69999999999988 78999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCC
Q 030899 77 YNWHDVAKRTEIVYDRALECPNQ 99 (169)
Q Consensus 77 fsw~~~a~~~~~vy~~i~~~~~~ 99 (169)
|+|+.+.+++.++..+.......
T Consensus 452 fs~~~~~~ri~~~~~~~~~~~~~ 474 (495)
T KOG0853|consen 452 FSWQHYSERIASVLGKYLQWEKV 474 (495)
T ss_pred HhHHHHHHHHHHHhHhcCCcccc
Confidence 99999999999998876654443
No 29
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.64 E-value=4.5e-16 Score=137.81 Aligned_cols=91 Identities=16% Similarity=0.179 Sum_probs=78.8
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-C--HHHHHHHHHHHHhcCC--CCCHHHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-D--PGDMVLAIRKAISLLP--KIDPQVMHERMK 74 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d--~~~la~~i~~li~~~~--~~~~~~~~~~v~ 74 (169)
|+||.+|+||++++|||+||+|||+|++||++|++.++.+| ++++ | +++++++|.+++.+.. ..+++++++++.
T Consensus 596 VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~ 675 (694)
T PRK15179 596 LLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWAS 675 (694)
T ss_pred EeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999998665 4543 3 5689999988887643 456778888898
Q ss_pred hcCCHHHHHHHHHHHHH
Q 030899 75 KLYNWHDVAKRTEIVYD 91 (169)
Q Consensus 75 ~~fsw~~~a~~~~~vy~ 91 (169)
++|||+.+++++.++|+
T Consensus 676 ~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 676 ARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HhCCHHHHHHHHHHHhC
Confidence 99999999999999995
No 30
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.63 E-value=6.2e-16 Score=125.39 Aligned_cols=89 Identities=18% Similarity=0.247 Sum_probs=75.7
Q ss_pred CcCCCC-CcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcC
Q 030899 1 MLNSLT-EAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLY 77 (169)
Q Consensus 1 v~pS~~-E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~f 77 (169)
++||.. |+||++++|||+||+|||+|++|+.+|++.++.. +.+++.. ++++|.++++++. ..++.++++.+.++|
T Consensus 272 v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~g~-~~~~~~~-l~~~i~~l~~~~~~~~~~~~~~~~~~~~~f 349 (363)
T cd04955 272 YLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGDKAI-YFKVGDD-LASLLEELEADPEEVSAMAKAARERIREKY 349 (363)
T ss_pred EeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecCCee-EecCchH-HHHHHHHHHhCHHHHHHHHHHHHHHHHHhC
Confidence 468988 9999999999999999999999999999987433 3343222 9999999999865 567888888888999
Q ss_pred CHHHHHHHHHHHHH
Q 030899 78 NWHDVAKRTEIVYD 91 (169)
Q Consensus 78 sw~~~a~~~~~vy~ 91 (169)
||+.+++++.++|+
T Consensus 350 s~~~~~~~~~~~y~ 363 (363)
T cd04955 350 TWEKIADQYEELYK 363 (363)
T ss_pred CHHHHHHHHHHHhC
Confidence 99999999999984
No 31
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.63 E-value=7e-16 Score=131.46 Aligned_cols=91 Identities=23% Similarity=0.372 Sum_probs=73.8
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCC------ceE-EeCC-CHHHHHHHHHHHHh----cCCCCCHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDD------MVV-LAEP-DPGDMVLAIRKAIS----LLPKIDPQV 68 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~------~~~-l~~~-d~~~la~~i~~li~----~~~~~~~~~ 68 (169)
++||.+|+||++++|||+||+|||+|++||++|++.++ .+| ++++ |+++++++|.+++. ++. ...+.
T Consensus 370 l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~-~~~~~ 448 (473)
T TIGR02095 370 LMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPS-LWEAL 448 (473)
T ss_pred EeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHH-HHHHH
Confidence 57999999999999999999999999999999999885 555 4554 99999999999887 322 11122
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHH
Q 030899 69 MHERMKKLYNWHDVAKRTEIVYDR 92 (169)
Q Consensus 69 ~~~~v~~~fsw~~~a~~~~~vy~~ 92 (169)
+.+...+.|||+.++++|.++|++
T Consensus 449 ~~~~~~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 449 QKNAMSQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred HHHHhccCCCcHHHHHHHHHHHHh
Confidence 222345689999999999999986
No 32
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.62 E-value=5.4e-16 Score=127.86 Aligned_cols=86 Identities=24% Similarity=0.268 Sum_probs=76.8
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLY 77 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~f 77 (169)
++||..|+||++++|||+||+|||+|++||..|++.++.++ ++++|+++++++|.+++++++ ..+++++++.+.++|
T Consensus 304 l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~a~~~~~~~~ 383 (392)
T cd03805 304 LYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEPTPEEFAEAMLKLANDPDLADRMGAAGRKRVKEKF 383 (392)
T ss_pred EECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999999987655 456699999999999999875 678888999999999
Q ss_pred CHHHHHHHH
Q 030899 78 NWHDVAKRT 86 (169)
Q Consensus 78 sw~~~a~~~ 86 (169)
||+.+++++
T Consensus 384 s~~~~~~~~ 392 (392)
T cd03805 384 STEAFAERL 392 (392)
T ss_pred CHHHHhhhC
Confidence 999998763
No 33
>PRK14098 glycogen synthase; Provisional
Probab=99.62 E-value=1e-15 Score=131.33 Aligned_cols=95 Identities=19% Similarity=0.316 Sum_probs=75.7
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccC----CceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPD----DMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHER 72 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~----~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~ 72 (169)
++||.+|+||++.+|||+||+|+|++++||++|++.+ +.+| ++++ |+++++++|.++++... ....+..++.
T Consensus 386 l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~ 465 (489)
T PRK14098 386 LMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA 465 (489)
T ss_pred EeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 5799999999999999999999999999999998864 4444 4454 89999999998765322 2223333444
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHc
Q 030899 73 MKKLYNWHDVAKRTEIVYDRALE 95 (169)
Q Consensus 73 v~~~fsw~~~a~~~~~vy~~i~~ 95 (169)
+.+.|||+.++++|+++|+++++
T Consensus 466 ~~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 466 MERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred hcCCCChHHHHHHHHHHHHHHhc
Confidence 56789999999999999998864
No 34
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.62 E-value=8e-16 Score=130.70 Aligned_cols=91 Identities=19% Similarity=0.308 Sum_probs=75.9
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCc------eE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDM------VV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMH 70 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~------~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~ 70 (169)
++||.+|+||++++|||+||+|||+|++||++|++.++. +| ++++ |+++++++|.++++... ....+.++
T Consensus 375 l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~ 454 (476)
T cd03791 375 LMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQR 454 (476)
T ss_pred ECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 579999999999999999999999999999999999875 55 4555 89999999999887533 33334445
Q ss_pred HHHHhcCCHHHHHHHHHHHHH
Q 030899 71 ERMKKLYNWHDVAKRTEIVYD 91 (169)
Q Consensus 71 ~~v~~~fsw~~~a~~~~~vy~ 91 (169)
+.....|||+.+++++.++|+
T Consensus 455 ~~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 455 NAMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHhccCCChHHHHHHHHHHHh
Confidence 555678999999999999996
No 35
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.62 E-value=7.9e-16 Score=123.01 Aligned_cols=90 Identities=30% Similarity=0.451 Sum_probs=80.2
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLY 77 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~f 77 (169)
++||..|+||++++|||+||+|||+++.||..+++.+ .+.++.+ |+++++++|.+++++++ ..++.++++.+.++|
T Consensus 273 v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~-~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 351 (365)
T cd03807 273 VLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD-TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENF 351 (365)
T ss_pred EeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc-CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhC
Confidence 4799999999999999999999999999999999988 4444444 89999999999999865 567888899999999
Q ss_pred CHHHHHHHHHHHHH
Q 030899 78 NWHDVAKRTEIVYD 91 (169)
Q Consensus 78 sw~~~a~~~~~vy~ 91 (169)
||+.+++++.++|+
T Consensus 352 s~~~~~~~~~~~y~ 365 (365)
T cd03807 352 SIEAMVEAYEELYR 365 (365)
T ss_pred CHHHHHHHHHHHhC
Confidence 99999999999984
No 36
>PLN02939 transferase, transferring glycosyl groups
Probab=99.62 E-value=1.6e-15 Score=136.32 Aligned_cols=96 Identities=20% Similarity=0.317 Sum_probs=75.5
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccC---------CceE-EeCC-CHHHHHHHHHHHHhcC---CCCCH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPD---------DMVV-LAEP-DPGDMVLAIRKAISLL---PKIDP 66 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~---------~~~~-l~~~-d~~~la~~i~~li~~~---~~~~~ 66 (169)
|+||++|+||++++|||+||+|+|++++||++|++.+ +.+| ++++ |+++++++|.+++... .....
T Consensus 861 LmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~ 940 (977)
T PLN02939 861 IIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWK 940 (977)
T ss_pred EECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHH
Confidence 5899999999999999999999999999999998865 3345 4444 9999999999987631 11111
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHcC
Q 030899 67 QVMHERMKKLYNWHDVAKRTEIVYDRALEC 96 (169)
Q Consensus 67 ~~~~~~v~~~fsw~~~a~~~~~vy~~i~~~ 96 (169)
.-+.+.+.+.|||+.++++|+++|++++..
T Consensus 941 ~L~~~am~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 941 QLVQKDMNIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 222333557899999999999999998854
No 37
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.62 E-value=2.4e-15 Score=123.74 Aligned_cols=94 Identities=21% Similarity=0.195 Sum_probs=79.8
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcC-CCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTR-VGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLPKIDPQVMHERMKKLY 77 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~-~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~~~~~~~~~~~v~~~f 77 (169)
|+||..||||++++||||||+|||+|+ .||..|++.++.+| ++++ |+++++++|.+++++++... ..+......+|
T Consensus 262 v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~~~-~~~~~~~~~~~ 340 (359)
T PRK09922 262 LLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVKYQ-HDAIPNSIERF 340 (359)
T ss_pred EECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcccCC-HHHHHHHHHHh
Confidence 579999999999999999999999999 89999999988665 4554 99999999999999876332 44445556779
Q ss_pred CHHHHHHHHHHHHHHHHc
Q 030899 78 NWHDVAKRTEIVYDRALE 95 (169)
Q Consensus 78 sw~~~a~~~~~vy~~i~~ 95 (169)
+-+...+++.++|+++.+
T Consensus 341 ~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 341 YEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred hHHHHHHHHHHHHHHHhc
Confidence 999999999999998764
No 38
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.61 E-value=7.6e-16 Score=123.52 Aligned_cols=87 Identities=23% Similarity=0.319 Sum_probs=77.7
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYN 78 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~fs 78 (169)
|+||..|+||++++|||+||+|||+|+.||..+++.++.+.+.+.++++++++|.+++++++ ..+.+++++.+.++|+
T Consensus 286 v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 365 (375)
T cd03821 286 VLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEYGCGWVVDDDVDALAAALRRALELPQRLKAMGENGRALVEERFS 365 (375)
T ss_pred EeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhcCceEEeCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcC
Confidence 57999999999999999999999999999999999985555666688999999999999865 6778888888899999
Q ss_pred HHHHHHHHH
Q 030899 79 WHDVAKRTE 87 (169)
Q Consensus 79 w~~~a~~~~ 87 (169)
|+.+++++.
T Consensus 366 ~~~~~~~~~ 374 (375)
T cd03821 366 WTAIAQQLL 374 (375)
T ss_pred HHHHHHHhh
Confidence 999999875
No 39
>PHA01633 putative glycosyl transferase group 1
Probab=99.61 E-value=2.1e-15 Score=123.51 Aligned_cols=86 Identities=20% Similarity=0.169 Sum_probs=67.8
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCC------------------ceE-EeCC-CHHHHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDD------------------MVV-LAEP-DPGDMVLAIRKAISL 60 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~------------------~~~-l~~~-d~~~la~~i~~li~~ 60 (169)
|+||..||||++++|||+||+|||+|+.||++|++.++ ..+ .+++ |+++++++|..++..
T Consensus 228 V~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 228 IVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL 307 (335)
T ss_pred EECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc
Confidence 57999999999999999999999999999999975531 122 3443 999999999998776
Q ss_pred CC-CCCHHHHHHHHHhcCCHHHHHHHHH
Q 030899 61 LP-KIDPQVMHERMKKLYNWHDVAKRTE 87 (169)
Q Consensus 61 ~~-~~~~~~~~~~v~~~fsw~~~a~~~~ 87 (169)
.+ ...+.+++ ...+.|+|+.+.++|+
T Consensus 308 ~~~~~~~~~~~-~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 308 QDREERSMKLK-ELAKKYDIRNLYTRFL 334 (335)
T ss_pred cChhhhhHHHH-HHHHhcCHHHHHHHhh
Confidence 44 33344454 4567799999999886
No 40
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.61 E-value=1.9e-15 Score=122.20 Aligned_cols=91 Identities=25% Similarity=0.386 Sum_probs=76.2
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYN 78 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~fs 78 (169)
++||..|+||++++|||++|+|||+++.|+..|++.+....+...|+++++++|.+++++.. .....++++.+.++||
T Consensus 267 v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~s 346 (360)
T cd04951 267 VLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKKFS 346 (360)
T ss_pred EecccccCCChHHHHHHHcCCCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcC
Confidence 57999999999999999999999999999999999884444444599999999999986533 2233334777889999
Q ss_pred HHHHHHHHHHHHH
Q 030899 79 WHDVAKRTEIVYD 91 (169)
Q Consensus 79 w~~~a~~~~~vy~ 91 (169)
|+.+++++.++|.
T Consensus 347 ~~~~~~~~~~~y~ 359 (360)
T cd04951 347 INSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999996
No 41
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.58 E-value=2.6e-15 Score=122.37 Aligned_cols=88 Identities=22% Similarity=0.327 Sum_probs=76.2
Q ss_pred CcCCC------CCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHH
Q 030899 1 MLNSL------TEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMH 70 (169)
Q Consensus 1 v~pS~------~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~ 70 (169)
|+||. .||||++++|||+||+|||+|+.+|..|++.++.++ ++++ |+++++++|.+++++++ ..++.+++
T Consensus 269 v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a~ 348 (367)
T cd05844 269 LQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADPDLRARMGAAGR 348 (367)
T ss_pred EECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 35775 599999999999999999999999999999887655 4544 89999999999998765 56778888
Q ss_pred HHHHhcCCHHHHHHHHHH
Q 030899 71 ERMKKLYNWHDVAKRTEI 88 (169)
Q Consensus 71 ~~v~~~fsw~~~a~~~~~ 88 (169)
+.+.++|||+.+++++.+
T Consensus 349 ~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 349 RRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHCCHHHHHHHHhc
Confidence 889999999999999875
No 42
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.57 E-value=7.7e-15 Score=124.67 Aligned_cols=88 Identities=20% Similarity=0.179 Sum_probs=74.5
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWH 80 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~~~~~~~~~~~v~~~fsw~ 80 (169)
|+||.+|+||++++||||||+|||+++.++ .+++.++.+++...|.+++++++.+++.+........ ..+.|||+
T Consensus 305 v~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~~~~~~a~ai~~~l~~~~~~~~~~----a~~~~SWe 379 (462)
T PLN02846 305 LNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYDDGKGFVRATLKALAEEPAPLTDA----QRHELSWE 379 (462)
T ss_pred EECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecCCHHHHHHHHHHHHccCchhHHHH----HHHhCCHH
Confidence 589999999999999999999999999998 5999888888777899999999999998643222222 33589999
Q ss_pred HHHHHHHHHHHHH
Q 030899 81 DVAKRTEIVYDRA 93 (169)
Q Consensus 81 ~~a~~~~~vy~~i 93 (169)
..++++.++|+--
T Consensus 380 ~~~~~l~~~~~~~ 392 (462)
T PLN02846 380 AATERFLRVADLD 392 (462)
T ss_pred HHHHHHHHHhccC
Confidence 9999999999743
No 43
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.57 E-value=5.8e-15 Score=122.97 Aligned_cols=91 Identities=16% Similarity=0.158 Sum_probs=75.1
Q ss_pred CcCCC-CCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcC
Q 030899 1 MLNSL-TEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLY 77 (169)
Q Consensus 1 v~pS~-~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~f 77 (169)
|+||. .||+|++++|||+||+|||+|+.++-.....++.+.++..|+++++++|.++++++. ..++.++++.+.++|
T Consensus 302 v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i~~~~~~g~lv~~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~f 381 (397)
T TIGR03087 302 VAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGIDALPGAELLVAADPADFAAAILALLANPAEREELGQAARRRVLQHY 381 (397)
T ss_pred EecccccCCcccHHHHHHHcCCCEEecCcccccccccCCcceEeCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhC
Confidence 46887 699999999999999999999976432222234455566799999999999998765 678889999999999
Q ss_pred CHHHHHHHHHHHHH
Q 030899 78 NWHDVAKRTEIVYD 91 (169)
Q Consensus 78 sw~~~a~~~~~vy~ 91 (169)
||+.++++++++|+
T Consensus 382 sw~~~~~~~~~~l~ 395 (397)
T TIGR03087 382 HWPRNLARLDALLE 395 (397)
T ss_pred CHHHHHHHHHHHhc
Confidence 99999999999875
No 44
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.57 E-value=2e-15 Score=123.92 Aligned_cols=85 Identities=24% Similarity=0.257 Sum_probs=73.5
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCC-CCCccccCCceEE-eCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHh
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVG-GVPEVLPDDMVVL-AEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKK 75 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~g-g~~evl~~~~~~l-~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~ 75 (169)
|+||..||||++++|||++|+|||+++++ |.++++.++.+|+ +++ |+++++++|..+++++. ..++.++++. .+
T Consensus 283 v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~-~~ 361 (372)
T cd04949 283 LLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYEN-AE 361 (372)
T ss_pred EecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCHHHHHHHHHHHHHH-HH
Confidence 57999999999999999999999999987 8999999886664 444 89999999999999875 6677777777 67
Q ss_pred cCCHHHHHHHH
Q 030899 76 LYNWHDVAKRT 86 (169)
Q Consensus 76 ~fsw~~~a~~~ 86 (169)
+|||+.++++|
T Consensus 362 ~~s~~~~~~~w 372 (372)
T cd04949 362 RYSEENVWEKW 372 (372)
T ss_pred HhhHHHHHhcC
Confidence 89999998764
No 45
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.57 E-value=3.1e-15 Score=122.85 Aligned_cols=87 Identities=31% Similarity=0.517 Sum_probs=77.2
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKL 76 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~ 76 (169)
++||..|+||++++|||+||+|||+++.+|..|++.++.++ ++++ |+++++++|.+++++++ ..++.++++.+.++
T Consensus 307 l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~ 386 (398)
T cd03800 307 VNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRRARAR 386 (398)
T ss_pred EecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 47999999999999999999999999999999999987555 4454 89999999999998765 66788888998899
Q ss_pred CCHHHHHHHHH
Q 030899 77 YNWHDVAKRTE 87 (169)
Q Consensus 77 fsw~~~a~~~~ 87 (169)
|||+.+++++.
T Consensus 387 ~s~~~~~~~~~ 397 (398)
T cd03800 387 YTWERVAARLL 397 (398)
T ss_pred CCHHHHHHHHh
Confidence 99999999875
No 46
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.56 E-value=8.1e-15 Score=118.12 Aligned_cols=89 Identities=24% Similarity=0.261 Sum_probs=75.1
Q ss_pred CcCCCCC--cchHHHHHHHHcCCcEEEcCCCCCCccccCC-ceEEeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHH
Q 030899 1 MLNSLTE--AFCIAILEAASCGLLTVSTRVGGVPEVLPDD-MVVLAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMK 74 (169)
Q Consensus 1 v~pS~~E--~fgl~ilEAma~G~PVVat~~gg~~evl~~~-~~~l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~ 74 (169)
++||..| +||++++|||+||+|||+|++|+ .+.+.++ .+.++.+ |+++++++|..+++++. ..+++++++.+.
T Consensus 272 v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 272 VLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPELAQALRARAREYAR 350 (366)
T ss_pred EecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHh
Confidence 4799999 99999999999999999999999 5555544 4445555 79999999999999755 667788888877
Q ss_pred hcCCHHHHHHHHHHHHH
Q 030899 75 KLYNWHDVAKRTEIVYD 91 (169)
Q Consensus 75 ~~fsw~~~a~~~~~vy~ 91 (169)
+ |||+.+++++.++|+
T Consensus 351 ~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 351 A-MSWERVAERYLRLLA 366 (366)
T ss_pred h-CCHHHHHHHHHHHhC
Confidence 7 999999999999873
No 47
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.56 E-value=7.6e-15 Score=118.03 Aligned_cols=90 Identities=22% Similarity=0.327 Sum_probs=77.7
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKL 76 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~ 76 (169)
++||..|+||++++|||+||+|||+++.++..+++.++..+ ++.+ |.++++++|.+++++++ ..+..++++.+ +.
T Consensus 271 l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~ 349 (364)
T cd03814 271 VFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARARAEA-ER 349 (364)
T ss_pred EECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hh
Confidence 46899999999999999999999999999999999986555 4444 78899999999999876 56667777776 67
Q ss_pred CCHHHHHHHHHHHHH
Q 030899 77 YNWHDVAKRTEIVYD 91 (169)
Q Consensus 77 fsw~~~a~~~~~vy~ 91 (169)
|+|+.+++++.++|+
T Consensus 350 ~~~~~~~~~~~~~~~ 364 (364)
T cd03814 350 RSWEAFLDNLLEAYR 364 (364)
T ss_pred cCHHHHHHHHHHhhC
Confidence 999999999999873
No 48
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.55 E-value=7.7e-15 Score=116.82 Aligned_cols=87 Identities=25% Similarity=0.248 Sum_probs=76.7
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKL 76 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~ 76 (169)
++||..|+||++++|||+||+|||+|+.++..+++.++.++ ++++ |+++++++|.+++.+++ ..++.++++.+.++
T Consensus 268 i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 347 (359)
T cd03808 268 VLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEE 347 (359)
T ss_pred EecCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 47999999999999999999999999999999999877555 4444 79999999999988766 66778888998999
Q ss_pred CCHHHHHHHHH
Q 030899 77 YNWHDVAKRTE 87 (169)
Q Consensus 77 fsw~~~a~~~~ 87 (169)
|+|+.+++++.
T Consensus 348 ~s~~~~~~~~~ 358 (359)
T cd03808 348 FDEEIVVKKLL 358 (359)
T ss_pred cCHHHHHHHhh
Confidence 99999998875
No 49
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.55 E-value=8.5e-15 Score=126.18 Aligned_cols=95 Identities=17% Similarity=0.221 Sum_probs=72.3
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCC----CccccCC--ceEEeCC--------CHHHHHHHHHHHHhcCC-CCC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGV----PEVLPDD--MVVLAEP--------DPGDMVLAIRKAISLLP-KID 65 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~----~evl~~~--~~~l~~~--------d~~~la~~i~~li~~~~-~~~ 65 (169)
|+||++|+||++++|||+||+|||+|+.+|+ +|++.++ .++++.+ ++++++++|.++++... ..+
T Consensus 479 v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~ 558 (590)
T cd03793 479 VFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRI 558 (590)
T ss_pred EeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHH
Confidence 6899999999999999999999999999998 5555543 3445441 46788888888775433 222
Q ss_pred HH-HHHHHHHhcCCHHHHHHHHHHHHHHHHc
Q 030899 66 PQ-VMHERMKKLYNWHDVAKRTEIVYDRALE 95 (169)
Q Consensus 66 ~~-~~~~~v~~~fsw~~~a~~~~~vy~~i~~ 95 (169)
.. ...++..+.|+|++.++.|.+.|+.+++
T Consensus 559 ~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 559 IQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 22 2334667889999999999999998775
No 50
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.53 E-value=1.6e-14 Score=120.61 Aligned_cols=95 Identities=16% Similarity=0.097 Sum_probs=81.5
Q ss_pred CcCCCCCc----chHHHHHHHHcCCcEEEcCCCC--CCccccCCceEEeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHH
Q 030899 1 MLNSLTEA----FCIAILEAASCGLLTVSTRVGG--VPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP--KIDPQVMHE 71 (169)
Q Consensus 1 v~pS~~E~----fgl~ilEAma~G~PVVat~~gg--~~evl~~~~~~l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~ 71 (169)
++||..|+ +|..++|||+||+|||+|+.|| ..+++. +.+.++++ |+++++++|.++++++. ..+++++++
T Consensus 308 v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~-~~G~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~ 386 (412)
T PRK10307 308 LLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE-GIGVCVEPESVEALVAAIAALARQALLRPKLGTVARE 386 (412)
T ss_pred EEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh-CCcEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 46888898 5777899999999999999877 457777 55555665 89999999999998765 678899999
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHcC
Q 030899 72 RMKKLYNWHDVAKRTEIVYDRALEC 96 (169)
Q Consensus 72 ~v~~~fsw~~~a~~~~~vy~~i~~~ 96 (169)
.+.++|||+.+++++.++|++++.+
T Consensus 387 ~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 387 YAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999998864
No 51
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.51 E-value=2.6e-14 Score=113.54 Aligned_cols=91 Identities=37% Similarity=0.571 Sum_probs=79.5
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKL 76 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~ 76 (169)
++||..|++|++++|||++|+|||+++.++..+++.++..+ ++++ |+++++++|.++++++. ..+..++++.+.+.
T Consensus 280 i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 359 (374)
T cd03801 280 VLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVAER 359 (374)
T ss_pred EecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHh
Confidence 46888999999999999999999999999999999976555 4455 68999999999998866 56777788788999
Q ss_pred CCHHHHHHHHHHHHH
Q 030899 77 YNWHDVAKRTEIVYD 91 (169)
Q Consensus 77 fsw~~~a~~~~~vy~ 91 (169)
|+|+.+++++.++|+
T Consensus 360 ~~~~~~~~~~~~~~~ 374 (374)
T cd03801 360 FSWDRVAARTEEVYY 374 (374)
T ss_pred cCHHHHHHHHHHhhC
Confidence 999999999998873
No 52
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.51 E-value=1.9e-14 Score=115.94 Aligned_cols=86 Identities=26% Similarity=0.424 Sum_probs=72.4
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYN 78 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~fs 78 (169)
++||..|+||++++|||++|+|||+|+.|+..|++.++...+...|+++++++|.++++++. ..++++++ ...+.|+
T Consensus 277 l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~-~~~~~~s 355 (365)
T cd03809 277 VFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLEDPALREELRERGL-ARAKRFS 355 (365)
T ss_pred cccchhccCCCCHHHHhcCCCcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHH-HHHHhCC
Confidence 57999999999999999999999999999999998765444445589999999999988766 55566666 4567799
Q ss_pred HHHHHHHHH
Q 030899 79 WHDVAKRTE 87 (169)
Q Consensus 79 w~~~a~~~~ 87 (169)
|+.+++++.
T Consensus 356 w~~~~~~~~ 364 (365)
T cd03809 356 WEKTARRTL 364 (365)
T ss_pred HHHHHHHHh
Confidence 999998875
No 53
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.50 E-value=4.1e-14 Score=94.96 Aligned_cols=86 Identities=21% Similarity=0.295 Sum_probs=79.0
Q ss_pred cCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCH
Q 030899 2 LNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNW 79 (169)
Q Consensus 2 ~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~fsw 79 (169)
.|+..+++++.++|+||||+|||+++.+++++++.++..++...|++++.+++..+++++. ..+++++++.+.++|+|
T Consensus 4 n~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~~~~t~ 83 (92)
T PF13524_consen 4 NPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYNDPEELAEKIEYLLENPEERRRIAKNARERVLKRHTW 83 (92)
T ss_pred eCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhCCH
Confidence 5788899999999999999999999999999999999777766699999999999999876 77899999999999999
Q ss_pred HHHHHHHH
Q 030899 80 HDVAKRTE 87 (169)
Q Consensus 80 ~~~a~~~~ 87 (169)
+..++++.
T Consensus 84 ~~~~~~il 91 (92)
T PF13524_consen 84 EHRAEQIL 91 (92)
T ss_pred HHHHHHHH
Confidence 99999875
No 54
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.50 E-value=2.7e-14 Score=120.33 Aligned_cols=84 Identities=17% Similarity=0.258 Sum_probs=69.6
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCC-Ccccc---CCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGV-PEVLP---DDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMK 74 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~-~evl~---~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~ 74 (169)
++||..|+||++++|||+||+|||++++||. .|++. ++.+|+..+|+++++++|.++++++. .....++++.+.
T Consensus 329 v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~ 408 (419)
T cd03806 329 LHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLASTAEEYAEAIEKILSLSEEERLRIRRAARSSV 408 (419)
T ss_pred EECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999875 57777 67677666799999999999999754 334566677788
Q ss_pred hcCCHHHHHH
Q 030899 75 KLYNWHDVAK 84 (169)
Q Consensus 75 ~~fsw~~~a~ 84 (169)
++|||+.+.+
T Consensus 409 ~~fs~~~f~~ 418 (419)
T cd03806 409 KRFSDEEFER 418 (419)
T ss_pred HhhCHHHhcc
Confidence 8999998753
No 55
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.50 E-value=3e-14 Score=112.94 Aligned_cols=86 Identities=22% Similarity=0.239 Sum_probs=69.8
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCC-CCCccccCC-ceEEeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHh
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVG-GVPEVLPDD-MVVLAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKK 75 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~g-g~~evl~~~-~~~l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~ 75 (169)
++||..|+||++++|||+||+|||+++.+ +..+++.++ .+.++++ |+++++++|.+++++++ ..++.++ ....+
T Consensus 257 i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~ 335 (348)
T cd03820 257 VLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANA-RESAE 335 (348)
T ss_pred EeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHH-HHHHH
Confidence 47999999999999999999999999975 456677766 4445555 88999999999998866 5566666 44567
Q ss_pred cCCHHHHHHHHH
Q 030899 76 LYNWHDVAKRTE 87 (169)
Q Consensus 76 ~fsw~~~a~~~~ 87 (169)
+|+|+.+++++.
T Consensus 336 ~~~~~~~~~~~~ 347 (348)
T cd03820 336 RFSIENIIKQWE 347 (348)
T ss_pred HhCHHHHHHHhc
Confidence 799999999875
No 56
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.49 E-value=3.7e-14 Score=114.48 Aligned_cols=85 Identities=28% Similarity=0.431 Sum_probs=74.8
Q ss_pred CcCCCC------CcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHH
Q 030899 1 MLNSLT------EAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMH 70 (169)
Q Consensus 1 v~pS~~------E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~ 70 (169)
++||.. |+||++++|||+||+|||+++.|+.++++.++.++ ++.+ |+++++++|.++++++. ..++++++
T Consensus 260 l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~a~ 339 (355)
T cd03799 260 VLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPELRREMGEAGR 339 (355)
T ss_pred EecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 467777 99999999999999999999999999999988444 5555 89999999999998866 66788889
Q ss_pred HHHHhcCCHHHHHHH
Q 030899 71 ERMKKLYNWHDVAKR 85 (169)
Q Consensus 71 ~~v~~~fsw~~~a~~ 85 (169)
+.+.++|||+.++++
T Consensus 340 ~~~~~~~s~~~~~~~ 354 (355)
T cd03799 340 ARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHhcCHHHHhhc
Confidence 999999999999875
No 57
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.49 E-value=5.1e-14 Score=112.38 Aligned_cols=92 Identities=34% Similarity=0.550 Sum_probs=81.0
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLPKIDPQVMHERMKKLYN 78 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~~~~~~~~~~~v~~~fs 78 (169)
++||..|++|++++|||++|+|||+++.|+..+++.++.+| ++.+ |+++++++|.+++++....+..++++.+.+.|+
T Consensus 283 i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~s 362 (377)
T cd03798 283 VLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWLRLGRAARRRVAERFS 362 (377)
T ss_pred ecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHHHHhHHHHHHHHHHhh
Confidence 47899999999999999999999999999999999988764 4444 899999999999987544466778888999999
Q ss_pred HHHHHHHHHHHHHH
Q 030899 79 WHDVAKRTEIVYDR 92 (169)
Q Consensus 79 w~~~a~~~~~vy~~ 92 (169)
|+.+++++.++|++
T Consensus 363 ~~~~~~~~~~~~~~ 376 (377)
T cd03798 363 WENVAERLLELYRE 376 (377)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999875
No 58
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.48 E-value=1.6e-13 Score=111.88 Aligned_cols=83 Identities=19% Similarity=0.257 Sum_probs=69.5
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLPKIDPQVMHERMKKLYN 78 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~~~~~~~~~~~v~~~fs 78 (169)
++||. |+||++++|||+||+|||+++.||.+|++.++.+| ++++ |+++++++|..++++++ ...+..++.. ++|+
T Consensus 266 v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~-~~~~~~~~~~-~~~~ 342 (351)
T cd03804 266 LFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED-FDPQAIRAHA-ERFS 342 (351)
T ss_pred EECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc-cCHHHHHHHH-HhcC
Confidence 46899 99999999999999999999999999999987555 5554 89999999999998864 4555666655 4699
Q ss_pred HHHHHHHH
Q 030899 79 WHDVAKRT 86 (169)
Q Consensus 79 w~~~a~~~ 86 (169)
|+++.+++
T Consensus 343 ~~~~~~~~ 350 (351)
T cd03804 343 ESRFREKI 350 (351)
T ss_pred HHHHHHHh
Confidence 99998875
No 59
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.47 E-value=1.4e-13 Score=120.59 Aligned_cols=85 Identities=18% Similarity=0.211 Sum_probs=69.4
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWH 80 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~~~~~~~~~~~v~~~fsw~ 80 (169)
|+||.+|+||++++||||||+|||+|+.+|. +++.++.+++...|+++++++|.+++.++....... ....|||+
T Consensus 623 VlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~~D~EafAeAI~~LLsd~~~rl~~~----a~~~~SWe 697 (794)
T PLN02501 623 INPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTYKTSEDFVAKVKEALANEPQPLTPE----QRYNLSWE 697 (794)
T ss_pred EECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEecCCHHHHHHHHHHHHhCchhhhHHH----HHhhCCHH
Confidence 5899999999999999999999999999985 446677777777899999999999998764211111 13479999
Q ss_pred HHHHHHHHHH
Q 030899 81 DVAKRTEIVY 90 (169)
Q Consensus 81 ~~a~~~~~vy 90 (169)
.+++++++.=
T Consensus 698 AaadrLle~~ 707 (794)
T PLN02501 698 AATQRFMEYS 707 (794)
T ss_pred HHHHHHHHhh
Confidence 9999998864
No 60
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.45 E-value=7.2e-14 Score=113.08 Aligned_cols=82 Identities=21% Similarity=0.257 Sum_probs=69.9
Q ss_pred CcCC-CCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhc-CC--CCCHHHHHHHHH
Q 030899 1 MLNS-LTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISL-LP--KIDPQVMHERMK 74 (169)
Q Consensus 1 v~pS-~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~-~~--~~~~~~~~~~v~ 74 (169)
++|| ..|+||++++|||+||+|||+|+.||..|++.++.++ ++++ |+++++++|..++.. ++ ..+++++++.+.
T Consensus 268 i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 268 VSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred EecCCCCCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 4788 7999999999999999999999999999999988544 4444 899999999766653 33 678889999999
Q ss_pred hcCCHHHH
Q 030899 75 KLYNWHDV 82 (169)
Q Consensus 75 ~~fsw~~~ 82 (169)
++|+|+.+
T Consensus 348 ~~f~~~~~ 355 (355)
T cd03819 348 TLFSYDRM 355 (355)
T ss_pred HhhhhccC
Confidence 99999864
No 61
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.45 E-value=1.1e-13 Score=112.19 Aligned_cols=62 Identities=23% Similarity=0.144 Sum_probs=56.5
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCC-CHHHHHHHHHHHHhcCC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP 62 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~-d~~~la~~i~~li~~~~ 62 (169)
|+||..|+||++++|||++|+|||+|+.||.++++.++.+++..+ ++++++++|.++++++.
T Consensus 271 v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~ 333 (358)
T cd03812 271 LFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDR 333 (358)
T ss_pred EecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcc
Confidence 579999999999999999999999999999999999976666655 67999999999999977
No 62
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.44 E-value=1e-13 Score=112.00 Aligned_cols=83 Identities=24% Similarity=0.325 Sum_probs=71.6
Q ss_pred CcCCC--CCcchHHHHHHHHcCCcEEEcCCCCCCccccC-CceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHH
Q 030899 1 MLNSL--TEAFCIAILEAASCGLLTVSTRVGGVPEVLPD-DMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERM 73 (169)
Q Consensus 1 v~pS~--~E~fgl~ilEAma~G~PVVat~~gg~~evl~~-~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v 73 (169)
++||. .|+||++++|||+||+|||+|+.|+..+.+.+ +.+| ++.+ |+++++++|.+++++++ ..++.++++.+
T Consensus 268 i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 347 (357)
T cd03795 268 VFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAARERA 347 (357)
T ss_pred EeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Confidence 35775 69999999999999999999999999998875 5555 4444 89999999999999876 67889999999
Q ss_pred HhcCCHHHHH
Q 030899 74 KKLYNWHDVA 83 (169)
Q Consensus 74 ~~~fsw~~~a 83 (169)
.++|||+.++
T Consensus 348 ~~~~s~~~~~ 357 (357)
T cd03795 348 EEEFTADRMV 357 (357)
T ss_pred HHhcchHhhC
Confidence 9999999864
No 63
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.44 E-value=1.4e-13 Score=110.34 Aligned_cols=87 Identities=23% Similarity=0.326 Sum_probs=70.2
Q ss_pred CcCCC-CCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHh
Q 030899 1 MLNSL-TEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKK 75 (169)
Q Consensus 1 v~pS~-~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~ 75 (169)
++||. .|+||++++|||+||+|||+|+.+|..|++.++.++ ++.+ |++++++++.++++++. ..++.+++ +
T Consensus 267 i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~----~ 342 (359)
T cd03823 267 VVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAGIE----P 342 (359)
T ss_pred EEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHhHH----H
Confidence 46887 899999999999999999999999999999987544 4444 79999999999998754 33334443 3
Q ss_pred cCCHHHHHHHHHHHHH
Q 030899 76 LYNWHDVAKRTEIVYD 91 (169)
Q Consensus 76 ~fsw~~~a~~~~~vy~ 91 (169)
.++.+.++++++++|+
T Consensus 343 ~~~~~~~~~~~~~~~~ 358 (359)
T cd03823 343 PRSIEDQAEEYLKLYR 358 (359)
T ss_pred hhhHHHHHHHHHHHhh
Confidence 3445889999999886
No 64
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.37 E-value=7.7e-13 Score=106.35 Aligned_cols=86 Identities=13% Similarity=0.133 Sum_probs=73.8
Q ss_pred CcCCCCCcc-----hHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHH
Q 030899 1 MLNSLTEAF-----CIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHE 71 (169)
Q Consensus 1 v~pS~~E~f-----gl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~ 71 (169)
++||..|++ |++++|||+||+|||+++.+|..+.+.++.++ ++++ |+++++++|.+++.++. ..+++++++
T Consensus 299 i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 378 (394)
T cd03794 299 LVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERAEMGENGRR 378 (394)
T ss_pred EEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 467887765 88899999999999999999999999886444 4554 89999999999997766 677888899
Q ss_pred HHHhcCCHHHHHHHH
Q 030899 72 RMKKLYNWHDVAKRT 86 (169)
Q Consensus 72 ~v~~~fsw~~~a~~~ 86 (169)
.+.++|||+.+++++
T Consensus 379 ~~~~~~s~~~~~~~~ 393 (394)
T cd03794 379 YVEEKFSREKLAERL 393 (394)
T ss_pred HHHHhhcHHHHHHhc
Confidence 999899999999876
No 65
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.34 E-value=1.5e-12 Score=104.51 Aligned_cols=88 Identities=24% Similarity=0.332 Sum_probs=70.4
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLY 77 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~f 77 (169)
++||..|++|++++|||+||+|||+++.|+..+++.++.++ ++.++..++++++.++++++. ..++.++++.+.+.+
T Consensus 283 l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 283 VFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDEALAEALLRLLQDPELRRRLSKNAEESAEKFS 362 (374)
T ss_pred EecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999997555 454433399999999999876 456666776665533
Q ss_pred CHHHHHHHHHHHHHH
Q 030899 78 NWHDVAKRTEIVYDR 92 (169)
Q Consensus 78 sw~~~a~~~~~vy~~ 92 (169)
.+++++++|++
T Consensus 363 ----~~~~~~~~~~~ 373 (374)
T cd03817 363 ----FAKKVEKLYEE 373 (374)
T ss_pred ----HHHHHHHHHhc
Confidence 66777777764
No 66
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.33 E-value=4.5e-13 Score=98.81 Aligned_cols=70 Identities=26% Similarity=0.388 Sum_probs=55.7
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMH 70 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~-l~~~-d~~~la~~i~~li~~~~--~~~~~~~~ 70 (169)
|+||..|+||++++|||+||+|||+++.|+..|++.++.++ ++++ |+++++++|.+++++++ ..++++++
T Consensus 97 v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 97 VSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEKLLNDPELRQKLGKNAR 170 (172)
T ss_dssp EE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 47899999999999999999999999999999999998754 4444 89999999999999854 33444443
No 67
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.30 E-value=1.1e-11 Score=97.15 Aligned_cols=95 Identities=27% Similarity=0.498 Sum_probs=78.6
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCc-eEEeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDM-VVLAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKL 76 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~-~~l~~~-d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~ 76 (169)
++||..|+||++++|||++|+|||+++.++..+++.++. +.+..+ +.+++++++..++++.. .......++.+.+.
T Consensus 281 v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 360 (381)
T COG0438 281 VLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEE 360 (381)
T ss_pred EeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 478888999999999999999999999999999999874 334444 58999999999988763 33444456666688
Q ss_pred CCHHHHHHHHHHHHHHHHc
Q 030899 77 YNWHDVAKRTEIVYDRALE 95 (169)
Q Consensus 77 fsw~~~a~~~~~vy~~i~~ 95 (169)
|+|+.+++++.++|.....
T Consensus 361 ~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 361 FSWERIAEQLLELYEELLA 379 (381)
T ss_pred cCHHHHHHHHHHHHHHHHh
Confidence 9999999999999987764
No 68
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.30 E-value=4.8e-12 Score=106.46 Aligned_cols=79 Identities=13% Similarity=0.134 Sum_probs=64.5
Q ss_pred CCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhc---CC--CCCHHHHHHHHHhcCCH
Q 030899 5 LTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISL---LP--KIDPQVMHERMKKLYNW 79 (169)
Q Consensus 5 ~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~---~~--~~~~~~~~~~v~~~fsw 79 (169)
..|+||++++||||||+|||+|+.||.+|++.++.+|+..+|+++++++|.+++++ ++ ..+++++++.. .++|
T Consensus 326 ~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~--~~~~ 403 (415)
T cd03816 326 SGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFGDSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES--ELRW 403 (415)
T ss_pred cccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEECCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh--hcCH
Confidence 35889999999999999999999999999999987776657999999999999998 44 56666666654 4566
Q ss_pred HHHHHH
Q 030899 80 HDVAKR 85 (169)
Q Consensus 80 ~~~a~~ 85 (169)
+...++
T Consensus 404 ~~~~~~ 409 (415)
T cd03816 404 DENWDR 409 (415)
T ss_pred HHHHHH
Confidence 555443
No 69
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.29 E-value=2.8e-12 Score=101.60 Aligned_cols=78 Identities=27% Similarity=0.273 Sum_probs=57.3
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEE-eCC-CHHHHH---HHHHHHHhcCC--CCCHHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVL-AEP-DPGDMV---LAIRKAISLLP--KIDPQVMHERM 73 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l-~~~-d~~~la---~~i~~li~~~~--~~~~~~~~~~v 73 (169)
++||..|+||++++|||++|+|||+|+.||..|++.++.+++ +++ ++++++ +++..+..+++ ..++.++++.+
T Consensus 268 i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 347 (353)
T cd03811 268 VLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERV 347 (353)
T ss_pred EeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCChHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999999999886664 444 777874 44444444433 33444455555
Q ss_pred HhcCC
Q 030899 74 KKLYN 78 (169)
Q Consensus 74 ~~~fs 78 (169)
.++|+
T Consensus 348 ~~~~~ 352 (353)
T cd03811 348 AREYS 352 (353)
T ss_pred HHHhc
Confidence 55554
No 70
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.28 E-value=5.8e-12 Score=107.37 Aligned_cols=87 Identities=15% Similarity=0.194 Sum_probs=71.4
Q ss_pred CcCCCCCcchHHHHHHHHcCCc----EEEcCCCCCCccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLL----TVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHER 72 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~P----VVat~~gg~~evl~~~~~~l~~~-d~~~la~~i~~li~~~~---~~~~~~~~~~ 72 (169)
|+||..||||++++||||||+| ||+|+.+|..+.+. .+.+++| |+++++++|.++++++. .......+++
T Consensus 360 vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~--~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~ 437 (456)
T TIGR02400 360 LVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN--GALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDK 437 (456)
T ss_pred EECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999 99999988888875 3456666 99999999999998754 4445556677
Q ss_pred HHhcCCHHHHHHHHHHHH
Q 030899 73 MKKLYNWHDVAKRTEIVY 90 (169)
Q Consensus 73 v~~~fsw~~~a~~~~~vy 90 (169)
+.+ ||+...++++.+-+
T Consensus 438 v~~-~~~~~W~~~~l~~l 454 (456)
T TIGR02400 438 LRK-NDVQRWREDFLSDL 454 (456)
T ss_pred Hhh-CCHHHHHHHHHHHh
Confidence 654 99999999887543
No 71
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.22 E-value=8.6e-12 Score=106.41 Aligned_cols=86 Identities=16% Similarity=0.213 Sum_probs=69.2
Q ss_pred CcCCCCCcchHHHHHHHHcCCc----EEEcCCCCCCccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLL----TVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHER 72 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~P----VVat~~gg~~evl~~~~~~l~~~-d~~~la~~i~~li~~~~---~~~~~~~~~~ 72 (169)
|+||..||||++++|||+||+| ||+|+.+|..+.. ..+.+++| |+++++++|.++++++. ..+..+.++.
T Consensus 365 v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~~--~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~ 442 (460)
T cd03788 365 LVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEEL--SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREY 442 (460)
T ss_pred EeCccccccCcccceeEEEecCCCceEEEeccccchhhc--CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999 9999888888773 23446666 99999999999998764 3445555666
Q ss_pred HHhcCCHHHHHHHHHHH
Q 030899 73 MKKLYNWHDVAKRTEIV 89 (169)
Q Consensus 73 v~~~fsw~~~a~~~~~v 89 (169)
+ .+|+++..++++.+-
T Consensus 443 v-~~~~~~~w~~~~l~~ 458 (460)
T cd03788 443 V-RTHDVQAWANSFLDD 458 (460)
T ss_pred H-HhCCHHHHHHHHHHh
Confidence 5 569999999887653
No 72
>PLN02275 transferase, transferring glycosyl groups
Probab=99.08 E-value=1.2e-10 Score=96.49 Aligned_cols=53 Identities=11% Similarity=0.198 Sum_probs=47.8
Q ss_pred CCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHH
Q 030899 6 TEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAI 58 (169)
Q Consensus 6 ~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li 58 (169)
.|+||++++||||||+|||+|+.||.+|++.++.+|+..+|+++++++|.+++
T Consensus 319 ~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~~~~~la~~i~~l~ 371 (371)
T PLN02275 319 GLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFSSSSELADQLLELL 371 (371)
T ss_pred cccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEECCHHHHHHHHHHhC
Confidence 59999999999999999999999999999999977766668999999998763
No 73
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.08 E-value=6.3e-10 Score=95.18 Aligned_cols=98 Identities=22% Similarity=0.299 Sum_probs=78.1
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccC--------CceE--EeCCCHHHHHHHHHHHHhcCC-CCC--HH
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPD--------DMVV--LAEPDPGDMVLAIRKAISLLP-KID--PQ 67 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~--------~~~~--l~~~d~~~la~~i~~li~~~~-~~~--~~ 67 (169)
++||++|+||++-++||..|+++|++.+||+.|.+.+ ..+| +..+|+++++.+|.+++.-.. ..+ ..
T Consensus 373 lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~ 452 (487)
T COG0297 373 LMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRK 452 (487)
T ss_pred EeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 5799999999999999999999999999999999985 2344 344599999999998887654 222 22
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHcCCC
Q 030899 68 VMHERMKKLYNWHDVAKRTEIVYDRALECPN 98 (169)
Q Consensus 68 ~~~~~v~~~fsw~~~a~~~~~vy~~i~~~~~ 98 (169)
-........|+|+..+++|.++|+.++....
T Consensus 453 ~~~~~m~~d~sw~~sa~~y~~lY~~~~~~~~ 483 (487)
T COG0297 453 VQPNAMGADFSWDLSAKEYVELYKPLLSKPF 483 (487)
T ss_pred HHHhhcccccCchhHHHHHHHHHHHHhcccc
Confidence 2233334589999999999999999987543
No 74
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.05 E-value=7.8e-10 Score=91.71 Aligned_cols=81 Identities=21% Similarity=0.194 Sum_probs=59.7
Q ss_pred CcchHHHHHHHHcCCcEEEcCCCCCCccccCCc-eEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHH
Q 030899 7 EAFCIAILEAASCGLLTVSTRVGGVPEVLPDDM-VVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKR 85 (169)
Q Consensus 7 E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~-~~l~~~d~~~la~~i~~li~~~~~~~~~~~~~~v~~~fsw~~~a~~ 85 (169)
+++|++++||||||+|||+|+.+++.+ ... ..+...|+++++++|.+++.+..........+ +.+.|||+..+++
T Consensus 289 ~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~~~-~~~~~sW~~~a~~ 364 (373)
T cd04950 289 ATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEVVLIADDPEEFVAAIEKALLEDGPARERRRLR-LAAQNSWDARAAE 364 (373)
T ss_pred cCCcchHHHHhccCCCEEecCcHHHHh---hcCcEEEeCCCHHHHHHHHHHHHhcCCchHHHHHHH-HHHHCCHHHHHHH
Confidence 578999999999999999998665443 333 44556689999999999876544222222223 6778999999999
Q ss_pred HHHHHH
Q 030899 86 TEIVYD 91 (169)
Q Consensus 86 ~~~vy~ 91 (169)
+.+.+.
T Consensus 365 ~~~~l~ 370 (373)
T cd04950 365 MLEALQ 370 (373)
T ss_pred HHHHHH
Confidence 986554
No 75
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.04 E-value=3.9e-10 Score=101.89 Aligned_cols=93 Identities=15% Similarity=0.192 Sum_probs=75.4
Q ss_pred CcCCCCCcchHHHHHHHHcCCc----EEEcCCCCCCccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLL----TVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHER 72 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~P----VVat~~gg~~evl~~~~~~l~~~-d~~~la~~i~~li~~~~---~~~~~~~~~~ 72 (169)
|+||+.||||++++|||+||+| +|.|..+|..+.+.. .+.++.| |+++++++|.++++.+. ....+..+++
T Consensus 380 vvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l~~-~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~ 458 (797)
T PLN03063 380 LVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSLGA-GALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQY 458 (797)
T ss_pred EeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhhcC-CeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 5799999999999999999999 999999999998733 3446666 99999999999999644 3333445555
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHc
Q 030899 73 MKKLYNWHDVAKRTEIVYDRALE 95 (169)
Q Consensus 73 v~~~fsw~~~a~~~~~vy~~i~~ 95 (169)
+ ..++|...++.+.+.++++..
T Consensus 459 v-~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 459 V-KTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred h-hhCCHHHHHHHHHHHHHHHhh
Confidence 4 559999999999998887764
No 76
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.02 E-value=1.7e-10 Score=97.09 Aligned_cols=92 Identities=16% Similarity=0.062 Sum_probs=70.2
Q ss_pred cCCCCCcchHHHHHHHHcCCcEEEcCC-CCCCccccC---CceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHh
Q 030899 2 LNSLTEAFCIAILEAASCGLLTVSTRV-GGVPEVLPD---DMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKK 75 (169)
Q Consensus 2 ~pS~~E~fgl~ilEAma~G~PVVat~~-gg~~evl~~---~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~ 75 (169)
.+|+.|++|++++|||+||+|||+++. ++..++... +...+...|+++++++|.+++++++ ..++.++++.+.+
T Consensus 326 ~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~ 405 (425)
T PRK05749 326 GGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQ 405 (425)
T ss_pred CCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 468889999999999999999998765 555565443 3333445599999999999998765 6788888888776
Q ss_pred cCCHHHHHHHHHHHHHHHHcC
Q 030899 76 LYNWHDVAKRTEIVYDRALEC 96 (169)
Q Consensus 76 ~fsw~~~a~~~~~vy~~i~~~ 96 (169)
+ ....+++.+++.+.++.
T Consensus 406 ~---~~~~~~~~~~l~~~l~~ 423 (425)
T PRK05749 406 N---QGALQRTLQLLEPYLPP 423 (425)
T ss_pred C---ccHHHHHHHHHHHhccc
Confidence 5 36667777877766543
No 77
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.00 E-value=2.3e-10 Score=102.67 Aligned_cols=91 Identities=24% Similarity=0.367 Sum_probs=74.5
Q ss_pred CcCCCCCcchHHHHHHHHc-----CCcEEEcCCCCCCccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASC-----GLLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHE 71 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~-----G~PVVat~~gg~~evl~~~~~~l~~~-d~~~la~~i~~li~~~~---~~~~~~~~~ 71 (169)
++||..||||++++|||+| |.||++...|+.+++.. +.+++| |+++++++|.+++.++. ......+++
T Consensus 366 v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~~---~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~ 442 (726)
T PRK14501 366 LVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELAE---ALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQE 442 (726)
T ss_pred EecccccccCcccceEEEEcCCCCceEEEecccchhHHhCc---CeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5799999999999999999 56888888898888752 456677 99999999999998653 333455666
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHc
Q 030899 72 RMKKLYNWHDVAKRTEIVYDRALE 95 (169)
Q Consensus 72 ~v~~~fsw~~~a~~~~~vy~~i~~ 95 (169)
.+ .+|||+..++++.+.|.++..
T Consensus 443 ~v-~~~~~~~w~~~~l~~l~~~~~ 465 (726)
T PRK14501 443 RL-RRYDVHKWASDFLDELREAAE 465 (726)
T ss_pred HH-HhCCHHHHHHHHHHHHHHHHh
Confidence 65 569999999999999998754
No 78
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.70 E-value=2.3e-08 Score=86.61 Aligned_cols=85 Identities=9% Similarity=0.058 Sum_probs=72.8
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYN 78 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~fs 78 (169)
|.+|..|+|+ +.+||++.|+|+| .-|..+++.++.+|++-+|..+|++++..++.++. ......+.+.+ +.||
T Consensus 433 id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~-~~yS 507 (519)
T TIGR03713 433 IDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYIIDDISELLKALDYYLDNLKNWNYSLAYSIKLI-DDYS 507 (519)
T ss_pred EECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEeCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HHhh
Confidence 4579999999 9999999999999 45679999999888877999999999999999976 55666666665 6699
Q ss_pred HHHHHHHHHHHH
Q 030899 79 WHDVAKRTEIVY 90 (169)
Q Consensus 79 w~~~a~~~~~vy 90 (169)
-+++.+++.+++
T Consensus 508 ~~~i~~kW~~~~ 519 (519)
T TIGR03713 508 SENIIERLNELI 519 (519)
T ss_pred HHHHHHHHHhhC
Confidence 999999998763
No 79
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.65 E-value=1.1e-07 Score=77.48 Aligned_cols=94 Identities=18% Similarity=0.152 Sum_probs=74.3
Q ss_pred CCCCcchHHHHHHHHcCCcEEEcCCCCC-CccccCC---ceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcC
Q 030899 4 SLTEAFCIAILEAASCGLLTVSTRVGGV-PEVLPDD---MVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLY 77 (169)
Q Consensus 4 S~~E~fgl~ilEAma~G~PVVat~~gg~-~evl~~~---~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~f 77 (169)
=..|.||++++|+||+|+-.|+.+.||. -|++.+. .+|+..++.++.++++.+++.... ..+.++..+....+|
T Consensus 364 MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RF 443 (465)
T KOG1387|consen 364 MWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAPTDEEYAEAILKIVKLNYDERNMMRRNARKSLARF 443 (465)
T ss_pred hhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecCChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 3579999999999999999999998886 4555542 677888999999999999998644 334444444556679
Q ss_pred CHHHHHHHHHHHHHHHHcCC
Q 030899 78 NWHDVAKRTEIVYDRALECP 97 (169)
Q Consensus 78 sw~~~a~~~~~vy~~i~~~~ 97 (169)
+-...-+.+.+.+..++.+.
T Consensus 444 sE~~F~kd~~~~i~kll~e~ 463 (465)
T KOG1387|consen 444 GELKFDKDWENPICKLLEEE 463 (465)
T ss_pred hHHHHHHhHhHHHHHhhccc
Confidence 99999999999998887654
No 80
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.60 E-value=3.7e-08 Score=85.47 Aligned_cols=98 Identities=21% Similarity=0.300 Sum_probs=64.2
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCCccccCC-------ceEEeCC---CHHH----HHHHHHHHHhcCC--CC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDD-------MVVLAEP---DPGD----MVLAIRKAISLLP--KI 64 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~-------~~~l~~~---d~~~----la~~i~~li~~~~--~~ 64 (169)
|+||++|++|.+.+|+.++|+|.|+|+..|.-..+.+. +..+++. +.++ +++.|.++....+ ..
T Consensus 474 vFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri 553 (633)
T PF05693_consen 474 VFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRI 553 (633)
T ss_dssp EE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHH
T ss_pred eeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 68999999999999999999999999998866444321 2223433 4444 4445555444433 33
Q ss_pred CHHHHHHHHHhcCCHHHHHHHHHHHHHHHHcCCC
Q 030899 65 DPQVMHERMKKLYNWHDVAKRTEIVYDRALECPN 98 (169)
Q Consensus 65 ~~~~~~~~v~~~fsw~~~a~~~~~vy~~i~~~~~ 98 (169)
..++..+++.+..+|+.+...|.+.|+.++++..
T Consensus 554 ~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~~a~ 587 (633)
T PF05693_consen 554 IQRNRAERLSDLADWKNFGKYYEKAYDLALRRAY 587 (633)
T ss_dssp HHHHHHHHHGGGGBHHHHCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcC
Confidence 3445557788899999999999999998886543
No 81
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=98.55 E-value=1.2e-07 Score=78.44 Aligned_cols=85 Identities=11% Similarity=-0.014 Sum_probs=62.5
Q ss_pred CcchHHHHHHHHcCCcEEEcC-CCCCC----ccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCH
Q 030899 7 EAFCIAILEAASCGLLTVSTR-VGGVP----EVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNW 79 (169)
Q Consensus 7 E~fgl~ilEAma~G~PVVat~-~gg~~----evl~~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~fsw 79 (169)
++.|++++|||+||+|||+++ .+|.. +.+.+...++...|+++++++|.+++++++ ..++.++++ ..+.+++
T Consensus 280 ~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~-~~~~~s~ 358 (380)
T PRK13609 280 KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDDMKLLQMKEAMKS-LYLPEPA 358 (380)
T ss_pred CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHH-hCCCchH
Confidence 567999999999999999976 55532 233333444555699999999999998765 445555544 4566899
Q ss_pred HHHHHHHHHHHHH
Q 030899 80 HDVAKRTEIVYDR 92 (169)
Q Consensus 80 ~~~a~~~~~vy~~ 92 (169)
+.+++.+++.+..
T Consensus 359 ~~i~~~i~~~~~~ 371 (380)
T PRK13609 359 DHIVDDILAENHV 371 (380)
T ss_pred HHHHHHHHHhhhh
Confidence 9999999887753
No 82
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.51 E-value=1.3e-07 Score=79.11 Aligned_cols=87 Identities=10% Similarity=0.023 Sum_probs=66.0
Q ss_pred CcchHHHHHHHHcCCcEEEcCC-CCCCc-----cccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCC
Q 030899 7 EAFCIAILEAASCGLLTVSTRV-GGVPE-----VLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYN 78 (169)
Q Consensus 7 E~fgl~ilEAma~G~PVVat~~-gg~~e-----vl~~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~fs 78 (169)
++.|+++.|||++|+|+|+++. +| .| .+.+.+.++...|+++++++|.+++++++ ..+++++++. .+.|+
T Consensus 280 k~gg~tl~EA~a~G~PvI~~~~~pg-qe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~-~~~~s 357 (391)
T PRK13608 280 KPGGITISEGLARCIPMIFLNPAPG-QELENALYFEEKGFGKIADTPEEAIKIVASLTNGNEQLTNMISTMEQD-KIKYA 357 (391)
T ss_pred CCchHHHHHHHHhCCCEEECCCCCC-cchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCHHHHHHHHHHHHHh-cCCCC
Confidence 5679999999999999999864 33 22 22344445556799999999999998765 5666666665 45699
Q ss_pred HHHHHHHHHHHHHHHHc
Q 030899 79 WHDVAKRTEIVYDRALE 95 (169)
Q Consensus 79 w~~~a~~~~~vy~~i~~ 95 (169)
++.+++.+.+++..+.+
T Consensus 358 ~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 358 TQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HHHHHHHHHHHhhhhhh
Confidence 99999999988875543
No 83
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.49 E-value=7.7e-08 Score=68.00 Aligned_cols=58 Identities=26% Similarity=0.378 Sum_probs=39.8
Q ss_pred cCCC-CCcchHHHHHHHHcCCcEEEcCCCCCCcccc-CCceEEeCCCHHHHHHHHHHHHhc
Q 030899 2 LNSL-TEAFCIAILEAASCGLLTVSTRVGGVPEVLP-DDMVVLAEPDPGDMVLAIRKAISL 60 (169)
Q Consensus 2 ~pS~-~E~fgl~ilEAma~G~PVVat~~gg~~evl~-~~~~~l~~~d~~~la~~i~~li~~ 60 (169)
.|+. .|++|.+++|||++|+|||+++. +..++.. ++.+.+...|+++++++|.++++|
T Consensus 76 ~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 76 IPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLVANDPEELAEAIERLLND 135 (135)
T ss_dssp E-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE-TT-HHHHHHHHHHHHH-
T ss_pred EEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEECCCHHHHHHHHHHHhcC
Confidence 4554 67999999999999999999998 5666665 345556666999999999999875
No 84
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=98.45 E-value=1.8e-07 Score=77.86 Aligned_cols=81 Identities=15% Similarity=0.073 Sum_probs=56.0
Q ss_pred CcchHHHHHHHHcCCcEEEcCC------CCCCccccCCceEEeCCCHHHHHHHHHHHHhc-CC--CCCHHHHHHHHHhcC
Q 030899 7 EAFCIAILEAASCGLLTVSTRV------GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISL-LP--KIDPQVMHERMKKLY 77 (169)
Q Consensus 7 E~fgl~ilEAma~G~PVVat~~------gg~~evl~~~~~~l~~~d~~~la~~i~~li~~-~~--~~~~~~~~~~v~~~f 77 (169)
.+.|++++|||+||+|+|+++. |+...++..+. ++...|+++++++|.+++.+ ++ ..++.++++. ....
T Consensus 289 ~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~g~-g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~-~~~~ 366 (382)
T PLN02605 289 KAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDNGF-GAFSESPKEIARIVAEWFGDKSDELEAMSENALKL-ARPE 366 (382)
T ss_pred CCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhCCc-eeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-cCCc
Confidence 3458999999999999999984 44444554444 44557999999999999987 43 3455555444 3446
Q ss_pred CHHHHHHHHHHH
Q 030899 78 NWHDVAKRTEIV 89 (169)
Q Consensus 78 sw~~~a~~~~~v 89 (169)
+.+.+++.+.+.
T Consensus 367 a~~~i~~~l~~~ 378 (382)
T PLN02605 367 AVFDIVHDLHEL 378 (382)
T ss_pred hHHHHHHHHHHH
Confidence 666666655443
No 85
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.40 E-value=2.3e-07 Score=76.51 Aligned_cols=53 Identities=17% Similarity=0.088 Sum_probs=45.5
Q ss_pred hHHHHHHHHcCCcEEEc-CCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC
Q 030899 10 CIAILEAASCGLLTVST-RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP 62 (169)
Q Consensus 10 gl~ilEAma~G~PVVat-~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~ 62 (169)
|..++|||+||+|||++ ++|+.++++.++.++++..|++++++++.++++++.
T Consensus 283 g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g~~~lv~~d~~~i~~ai~~ll~~~~ 336 (365)
T TIGR00236 283 GGVQEEAPSLGKPVLVLRDTTERPETVEAGTNKLVGTDKENITKAAKRLLTDPD 336 (365)
T ss_pred hhHHHHHHHcCCCEEECCCCCCChHHHhcCceEEeCCCHHHHHHHHHHHHhChH
Confidence 56789999999999996 778899998877777777799999999999987643
No 86
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=98.39 E-value=4.4e-07 Score=74.41 Aligned_cols=81 Identities=15% Similarity=0.105 Sum_probs=59.3
Q ss_pred hHHHHHHHHcCCcEEEcCCCCCC--------cccc-CCceEEeCC-C--HHHHHHHHHHHHhcCC--CCCHHHHHHHHHh
Q 030899 10 CIAILEAASCGLLTVSTRVGGVP--------EVLP-DDMVVLAEP-D--PGDMVLAIRKAISLLP--KIDPQVMHERMKK 75 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~~--------evl~-~~~~~l~~~-d--~~~la~~i~~li~~~~--~~~~~~~~~~v~~ 75 (169)
+.+++|||++|+|||++..++.. +.+. .+.+.++++ | +++++++|.++++++. ..+++++++. .+
T Consensus 262 ~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~-~~ 340 (357)
T PRK00726 262 ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARAL-GK 340 (357)
T ss_pred HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhc-CC
Confidence 68999999999999999875422 3344 444445554 5 8999999999999865 5566666555 46
Q ss_pred cCCHHHHHHHHHHHHH
Q 030899 76 LYNWHDVAKRTEIVYD 91 (169)
Q Consensus 76 ~fsw~~~a~~~~~vy~ 91 (169)
.++-+.+++.+.++.+
T Consensus 341 ~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 341 PDAAERLADLIEELAR 356 (357)
T ss_pred cCHHHHHHHHHHHHhh
Confidence 6888888888777643
No 87
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.28 E-value=5.7e-07 Score=73.63 Aligned_cols=64 Identities=5% Similarity=-0.057 Sum_probs=50.2
Q ss_pred cchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHH
Q 030899 8 AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHE 71 (169)
Q Consensus 8 ~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~~~~~~~~~~ 71 (169)
++|..+.|+||||+|||+++.+++.+++.++..|++.++.+++++++.++.......+++++++
T Consensus 248 ~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v~~~~el~~~l~~~~~~~~~~m~~n~~~ 311 (333)
T PRK09814 248 NNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVVDSLEELPEIIDNITEEEYQEMVENVKK 311 (333)
T ss_pred cchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEeCCHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 5788899999999999999999999999999888877788899999987533211334444443
No 88
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=98.14 E-value=5.9e-06 Score=75.76 Aligned_cols=91 Identities=14% Similarity=0.262 Sum_probs=69.2
Q ss_pred CcCCCCCcchHHHHHHHHc-----CCcEEEcCCCCCCccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASC-----GLLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHE 71 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~-----G~PVVat~~gg~~evl~~~~~~l~~~-d~~~la~~i~~li~~~~---~~~~~~~~~ 71 (169)
++||+.|||+++..|+|+| |.+|+ +..+|..+.+.. ...++.| |+++++++|.+++..+. .......++
T Consensus 464 lvTslrDGmNLva~Eyva~~~~~~GvLIL-SEfaGaa~~L~~-~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~ 541 (934)
T PLN03064 464 LVTSLRDGMNLVSYEFVACQDSKKGVLIL-SEFAGAAQSLGA-GAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFM 541 (934)
T ss_pred EeCccccccCchHHHHHHhhcCCCCCeEE-eCCCchHHHhCC-ceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 4799999999999999999 55555 888888887733 3446677 99999999999998644 333444555
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHH
Q 030899 72 RMKKLYNWHDVAKRTEIVYDRAL 94 (169)
Q Consensus 72 ~v~~~fsw~~~a~~~~~vy~~i~ 94 (169)
.+ ..+++...++.+.+-+....
T Consensus 542 ~V-~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 542 HV-TTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred hc-ccCCHHHHHHHHHHHHHHHH
Confidence 54 55999999999877666554
No 89
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.13 E-value=1.2e-06 Score=71.16 Aligned_cols=62 Identities=13% Similarity=0.108 Sum_probs=45.0
Q ss_pred hHHHHHHHHcCCcEEEcCCCCC-------CccccCCceE-EeCC-C--HHHHHHHHHHHHhcCC--CCCHHHHHH
Q 030899 10 CIAILEAASCGLLTVSTRVGGV-------PEVLPDDMVV-LAEP-D--PGDMVLAIRKAISLLP--KIDPQVMHE 71 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~-------~evl~~~~~~-l~~~-d--~~~la~~i~~li~~~~--~~~~~~~~~ 71 (169)
|.+++|||++|+|+|+++.+|. .+++.++..+ ++++ | +++++++|.+++++++ ..+++++++
T Consensus 260 ~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 260 ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARK 334 (348)
T ss_pred hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHh
Confidence 7899999999999999988652 2456665444 4443 4 9999999999998754 344444443
No 90
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.10 E-value=2.1e-06 Score=69.88 Aligned_cols=73 Identities=16% Similarity=0.124 Sum_probs=48.5
Q ss_pred hHHHHHHHHcCCcEEEcCCCCC--------CccccC-CceEEeCC---CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHh
Q 030899 10 CIAILEAASCGLLTVSTRVGGV--------PEVLPD-DMVVLAEP---DPGDMVLAIRKAISLLP--KIDPQVMHERMKK 75 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~--------~evl~~-~~~~l~~~---d~~~la~~i~~li~~~~--~~~~~~~~~~v~~ 75 (169)
+++++|||++|+|||+++.++. .+.+.+ +.+.++++ |+++++++|..++++++ ..++.++++.+ +
T Consensus 262 ~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~ 340 (350)
T cd03785 262 ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLA-R 340 (350)
T ss_pred HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-C
Confidence 6899999999999999887541 244444 44445553 79999999999987644 34455554443 2
Q ss_pred cCCHHHHH
Q 030899 76 LYNWHDVA 83 (169)
Q Consensus 76 ~fsw~~~a 83 (169)
.+.-++++
T Consensus 341 ~~~~~~i~ 348 (350)
T cd03785 341 PDAAERIA 348 (350)
T ss_pred CCHHHHHH
Confidence 34444443
No 91
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=98.02 E-value=1.4e-05 Score=68.77 Aligned_cols=85 Identities=18% Similarity=0.228 Sum_probs=63.0
Q ss_pred CcCCCCCcchHHHHHHHHcCC----cEEEcCCCCCCccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGL----LTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHER 72 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~----PVVat~~gg~~evl~~~~~~l~~~-d~~~la~~i~~li~~~~---~~~~~~~~~~ 72 (169)
+.||+.||++++..|+++|+. |+|.|..+|..+.+.+ ..++.| |+++++++|.+++..+. ....+..++.
T Consensus 386 lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l~~--AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~ 463 (487)
T TIGR02398 386 WITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVELKG--ALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDA 463 (487)
T ss_pred EECccccccCcchhhHHhhhcCCCCCEEEeccccchhhcCC--CEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 468999999999999999988 9999999999888743 456777 99999999999999865 1222222333
Q ss_pred HHhcCCHHHHHHHHHH
Q 030899 73 MKKLYNWHDVAKRTEI 88 (169)
Q Consensus 73 v~~~fsw~~~a~~~~~ 88 (169)
+ ..++...-++.+.+
T Consensus 464 v-~~~d~~~W~~~fl~ 478 (487)
T TIGR02398 464 V-NYYDVQRWADEFLA 478 (487)
T ss_pred H-hhCCHHHHHHHHHH
Confidence 3 33565555555543
No 92
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.80 E-value=2.3e-05 Score=64.69 Aligned_cols=53 Identities=17% Similarity=0.129 Sum_probs=41.8
Q ss_pred hHHHHHHHHcCCcEEEc-----------------CCCCCCccccCCce--EEeC--CCHHHHHHHHHHHHhcCC
Q 030899 10 CIAILEAASCGLLTVST-----------------RVGGVPEVLPDDMV--VLAE--PDPGDMVLAIRKAISLLP 62 (169)
Q Consensus 10 gl~ilEAma~G~PVVat-----------------~~gg~~evl~~~~~--~l~~--~d~~~la~~i~~li~~~~ 62 (169)
|.+.+|||++|+|+|++ +.+++++++.++.. ++.. .|++++++.+.+++++++
T Consensus 270 G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 343 (380)
T PRK00025 270 GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA 343 (380)
T ss_pred cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH
Confidence 78889999999999976 56677788877632 2333 388999999999998865
No 93
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=97.56 E-value=0.00016 Score=61.75 Aligned_cols=60 Identities=7% Similarity=0.037 Sum_probs=48.9
Q ss_pred cCCCCCcchHHHHHHHHcCCcEEEcCCC-CCCccccCCceEEeCCCHHHHHHHHHHHHhcCC
Q 030899 2 LNSLTEAFCIAILEAASCGLLTVSTRVG-GVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP 62 (169)
Q Consensus 2 ~pS~~E~fgl~ilEAma~G~PVVat~~g-g~~evl~~~~~~l~~~d~~~la~~i~~li~~~~ 62 (169)
.+|..|+|++++.||++.|+||++.++. |..+++.+ +..+...++++|+++|.+++.++.
T Consensus 353 din~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~-g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 353 DINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS-ENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred EccccccHHHHHHHHHHcCCcEEEEecccCCcccccC-CceecCCCHHHHHHHHHHHhcCHH
Confidence 4688999999999999999999998875 55566666 233444599999999999988764
No 94
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=97.47 E-value=0.0012 Score=58.51 Aligned_cols=88 Identities=15% Similarity=0.017 Sum_probs=66.0
Q ss_pred CCC-CCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeC-------------CCHHHHHHHHHHHHh----cCCC-
Q 030899 3 NSL-TEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAE-------------PDPGDMVLAIRKAIS----LLPK- 63 (169)
Q Consensus 3 pS~-~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~-------------~d~~~la~~i~~li~----~~~~- 63 (169)
||. +|+.|++-+=||..|.+.+++--|...|....+.+..+. .|.++|.++|++.+. +...
T Consensus 485 Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~ 564 (601)
T TIGR02094 485 PRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGYDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEK 564 (601)
T ss_pred CCCCcCCchHHHHHHHHcCCceeecccCcccccCCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcc
Confidence 899 999999999999999999999988888877444444343 478899999977662 1111
Q ss_pred ----CCHHHHHHHHHh---cCCHHHHHHHHHHHH
Q 030899 64 ----IDPQVMHERMKK---LYNWHDVAKRTEIVY 90 (169)
Q Consensus 64 ----~~~~~~~~~v~~---~fsw~~~a~~~~~vy 90 (169)
...+..++.+.. .|||++++++|.+.|
T Consensus 565 ~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 565 GIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 133344444444 699999999999887
No 95
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.30 E-value=0.00026 Score=58.17 Aligned_cols=78 Identities=14% Similarity=0.265 Sum_probs=61.1
Q ss_pred cchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC------CCCHHHHHHHHHhcCCHHH
Q 030899 8 AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP------KIDPQVMHERMKKLYNWHD 81 (169)
Q Consensus 8 ~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~------~~~~~~~~~~v~~~fsw~~ 81 (169)
-.||.++....||+||++-+...+.|+++++.+|++..|.+++++.+..++++-. ....++.++. +.+.|+.
T Consensus 353 DLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~ 430 (444)
T KOG2941|consen 353 DLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFEDSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDE 430 (444)
T ss_pred CcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEeccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHH
Confidence 4799999999999999999999999999999999999999999999999998632 2222333332 4466666
Q ss_pred HHHHHH
Q 030899 82 VAKRTE 87 (169)
Q Consensus 82 ~a~~~~ 87 (169)
.-++..
T Consensus 431 ~W~~~~ 436 (444)
T KOG2941|consen 431 SWERTA 436 (444)
T ss_pred HHHHhh
Confidence 555543
No 96
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=97.28 E-value=0.00015 Score=61.40 Aligned_cols=97 Identities=18% Similarity=0.254 Sum_probs=67.7
Q ss_pred CcCCCCCcchHHHHHHHHcCCcEEEcCCCCCC----ccccCC--ceE-EeC-----C--CHHHHHHHHHHHHhcCC--CC
Q 030899 1 MLNSLTEAFCIAILEAASCGLLTVSTRVGGVP----EVLPDD--MVV-LAE-----P--DPGDMVLAIRKAISLLP--KI 64 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~PVVat~~gg~~----evl~~~--~~~-l~~-----~--d~~~la~~i~~li~~~~--~~ 64 (169)
|+||++|++|.+..|.--+|+|-|+|+..|.. |.+.+. .+. +++ + +.+++++-|.++....+ +.
T Consensus 505 VFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F~~qsRRQRI 584 (692)
T KOG3742|consen 505 VFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEFCKQSRRQRI 584 (692)
T ss_pred ccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999998854 444443 222 332 1 45777777777776544 33
Q ss_pred CHHHHHHHHHhcCCHHHHHHHHHHHHHHHHcCC
Q 030899 65 DPQVMHERMKKLYNWHDVAKRTEIVYDRALECP 97 (169)
Q Consensus 65 ~~~~~~~~v~~~fsw~~~a~~~~~vy~~i~~~~ 97 (169)
..++..++.....+|+.+..-|.+.=.-.+++.
T Consensus 585 iqRNrtErLSdLLDWk~lG~~Y~~aR~laL~r~ 617 (692)
T KOG3742|consen 585 IQRNRTERLSDLLDWKYLGRYYRKARHLALSRA 617 (692)
T ss_pred HHhcchhhHHHHHhHHHHhHHHHHHHHHHHHhh
Confidence 334445667777889888877776655555443
No 97
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.14 E-value=0.00068 Score=55.43 Aligned_cols=51 Identities=27% Similarity=0.245 Sum_probs=40.7
Q ss_pred HHHHHHHcCCcEEEcCC-CCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC
Q 030899 12 AILEAASCGLLTVSTRV-GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP 62 (169)
Q Consensus 12 ~ilEAma~G~PVVat~~-gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~ 62 (169)
...|||++|+|||+++. +..++.+.++.+.....|++++++++.++++++.
T Consensus 288 i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 288 IQEEASFLGVPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred HHhhhhhcCCCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCch
Confidence 47899999999999864 4567777776665555579999999999998754
No 98
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.00 E-value=0.0018 Score=53.75 Aligned_cols=87 Identities=10% Similarity=0.052 Sum_probs=77.3
Q ss_pred chHHHHHHHHcCCcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHH
Q 030899 9 FCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRT 86 (169)
Q Consensus 9 fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~fsw~~~a~~~ 86 (169)
+.+-+.|+++||.|-++....++...+.++...++..|..++.+.+..++..+. +.+.+.+.+++...|+.+.-+..+
T Consensus 276 ~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~ 355 (373)
T COG4641 276 PTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKL 355 (373)
T ss_pred chhhHHHHhhcCCccccccHHHHHHhcCCchheEEecCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHH
Confidence 478999999999999999999999999999888888899999999999999875 778889999999999999998888
Q ss_pred HHHHHHHHc
Q 030899 87 EIVYDRALE 95 (169)
Q Consensus 87 ~~vy~~i~~ 95 (169)
.+...++..
T Consensus 356 ~~~i~sI~~ 364 (373)
T COG4641 356 LNEIASINI 364 (373)
T ss_pred HHHHHHHHH
Confidence 887776443
No 99
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=95.95 E-value=0.029 Score=48.53 Aligned_cols=87 Identities=20% Similarity=0.244 Sum_probs=51.7
Q ss_pred CcCCCCCcchHHHHHHHHcCCc----EEEcCCCCCCccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGLL----TVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHER 72 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~P----VVat~~gg~~evl~~~~~~l~~~-d~~~la~~i~~li~~~~---~~~~~~~~~~ 72 (169)
+.+|..+|.-++..|..+|... +|.|...|..+.+.++.. ++.| |+++++++|.++++.+. ....+..++.
T Consensus 377 lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~al-~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~ 455 (474)
T PF00982_consen 377 LVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEAAL-LVNPWDIEEVADAIHEALTMPPEERKERHARLREY 455 (474)
T ss_dssp EE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS-E-EE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHH
T ss_pred EecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCCccE-EECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3589999999999999999765 567777788888877654 4556 99999999999999765 1111222333
Q ss_pred HHhcCCHHHHHHHHHHH
Q 030899 73 MKKLYNWHDVAKRTEIV 89 (169)
Q Consensus 73 v~~~fsw~~~a~~~~~v 89 (169)
+ ..++...-++++.+-
T Consensus 456 v-~~~~~~~W~~~~l~~ 471 (474)
T PF00982_consen 456 V-REHDVQWWAESFLRD 471 (474)
T ss_dssp H-HHT-HHHHHHHHHHH
T ss_pred h-HhCCHHHHHHHHHHH
Confidence 3 336666555555443
No 100
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=95.85 E-value=0.035 Score=50.69 Aligned_cols=90 Identities=14% Similarity=0.000 Sum_probs=63.6
Q ss_pred CcCCC--CCcchHHHHHHHHcCCcEEEcCCCCCCccccCCceEEe-CC-------------CHHHHHHHHHHHHh----c
Q 030899 1 MLNSL--TEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLA-EP-------------DPGDMVLAIRKAIS----L 60 (169)
Q Consensus 1 v~pS~--~E~fgl~ilEAma~G~PVVat~~gg~~evl~~~~~~l~-~~-------------d~~~la~~i~~li~----~ 60 (169)
++||+ .|+.|++-+=||..|.+-+++--|...|.. ++.+|+. .+ +.++|.+.|++.+- +
T Consensus 571 Ln~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~ 649 (778)
T cd04299 571 LNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYD 649 (778)
T ss_pred ccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 46898 999999999999999999999999999987 5544542 22 34667777755443 2
Q ss_pred C-----C---CCCHHHHHHHHHhcCCHHHHHHHHHH-HHH
Q 030899 61 L-----P---KIDPQVMHERMKKLYNWHDVAKRTEI-VYD 91 (169)
Q Consensus 61 ~-----~---~~~~~~~~~~v~~~fsw~~~a~~~~~-vy~ 91 (169)
. . ..+.+++...+...|||++|+++|.+ +|.
T Consensus 650 r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~ 689 (778)
T cd04299 650 RDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYL 689 (778)
T ss_pred CCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHH
Confidence 1 1 23334444444458999999999865 553
No 101
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=95.05 E-value=0.039 Score=46.19 Aligned_cols=52 Identities=23% Similarity=0.248 Sum_probs=31.7
Q ss_pred hHHHHHHHHcCCcEEEc-CCCCCC----------------ccccCCceE--EeCC--CHHHHHHHHHHHHhcC
Q 030899 10 CIAILEAASCGLLTVST-RVGGVP----------------EVLPDDMVV--LAEP--DPGDMVLAIRKAISLL 61 (169)
Q Consensus 10 gl~ilEAma~G~PVVat-~~gg~~----------------evl~~~~~~--l~~~--d~~~la~~i~~li~~~ 61 (169)
|.+.+|||++|+|+|.. +++.++ .++.+.... +... +++.+++.+.++++++
T Consensus 276 Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 276 GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 77888999999998865 333222 222222111 1211 6788888888887764
No 102
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=95.03 E-value=0.055 Score=46.74 Aligned_cols=92 Identities=11% Similarity=0.152 Sum_probs=66.2
Q ss_pred CcCCCCCcchHHHHHHHHcCC-----cEEEcCCCCCCccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHH
Q 030899 1 MLNSLTEAFCIAILEAASCGL-----LTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHE 71 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~-----PVVat~~gg~~evl~~~~~~l~~~-d~~~la~~i~~li~~~~---~~~~~~~~~ 71 (169)
+.+|+-+|+-++.-|..+|.. ..|-|...|..+.+. ...++.| |.++++++|.+++..+. ....+..++
T Consensus 356 lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~--~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~ 433 (474)
T PRK10117 356 LVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT--SALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLD 433 (474)
T ss_pred EecccccccccccchheeeecCCCCccEEEecccchHHHhC--CCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 358899999999999999965 256677777777774 3457777 99999999999999866 222233334
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHc
Q 030899 72 RMKKLYNWHDVAKRTEIVYDRALE 95 (169)
Q Consensus 72 ~v~~~fsw~~~a~~~~~vy~~i~~ 95 (169)
.+ ..++...-++.+.+-+..+..
T Consensus 434 ~v-~~~dv~~W~~~fL~~L~~~~~ 456 (474)
T PRK10117 434 VI-VKNDINHWQECFISDLKQIVP 456 (474)
T ss_pred Hh-hhCCHHHHHHHHHHHHHHhhh
Confidence 43 447877778877776666543
No 103
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=94.88 E-value=0.063 Score=44.65 Aligned_cols=79 Identities=14% Similarity=0.084 Sum_probs=46.7
Q ss_pred HHHHHHHHcCCcEEEcCCCCCCcc----ccC-CceEEeCC---CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHH
Q 030899 11 IAILEAASCGLLTVSTRVGGVPEV----LPD-DMVVLAEP---DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHD 81 (169)
Q Consensus 11 l~ilEAma~G~PVVat~~gg~~ev----l~~-~~~~l~~~---d~~~la~~i~~li~~~~-~~~~~~~~~~v~~~fsw~~ 81 (169)
.++.||+++|+|+|.....+-... +.+ +.+..... +.+++.++|.+++++++ ....+..++.+...-.-+.
T Consensus 302 ~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~ 381 (392)
T TIGR01426 302 NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARR 381 (392)
T ss_pred hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHH
Confidence 478999999999998765542221 222 33333332 67899999999998754 2222333344444445555
Q ss_pred HHHHHHHH
Q 030899 82 VAKRTEIV 89 (169)
Q Consensus 82 ~a~~~~~v 89 (169)
.++.++++
T Consensus 382 aa~~i~~~ 389 (392)
T TIGR01426 382 AADEIEGF 389 (392)
T ss_pred HHHHHHHh
Confidence 55544443
No 104
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=94.23 E-value=0.063 Score=46.28 Aligned_cols=85 Identities=13% Similarity=0.085 Sum_probs=50.9
Q ss_pred chHHHHHHHHcCCcEEEcCCCCCCccccC------CceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHH--hcCC
Q 030899 9 FCIAILEAASCGLLTVSTRVGGVPEVLPD------DMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMK--KLYN 78 (169)
Q Consensus 9 fgl~ilEAma~G~PVVat~~gg~~evl~~------~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~--~~fs 78 (169)
=+.+.+||+.+|+|||+-.......=+.- |..-++..|.+++++.-.++..+++ .....+.++... .-|+
T Consensus 373 G~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~s~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd 452 (468)
T PF13844_consen 373 GGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIADSEEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFD 452 (468)
T ss_dssp -SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-SSHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-
T ss_pred CcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCC
Confidence 36789999999999998764433221111 1222566788888888888888765 334444444432 4589
Q ss_pred HHHHHHHHHHHHHHH
Q 030899 79 WHDVAKRTEIVYDRA 93 (169)
Q Consensus 79 w~~~a~~~~~vy~~i 93 (169)
-...++.+++.|+++
T Consensus 453 ~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 453 PKRFARNLEAAYRQM 467 (468)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 105
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=93.36 E-value=0.17 Score=42.10 Aligned_cols=44 Identities=32% Similarity=0.458 Sum_probs=35.5
Q ss_pred HHHHHHcCCcEEEcCCCCCCccccCCceEE-eCCCHHHHHHHHHHHH
Q 030899 13 ILEAASCGLLTVSTRVGGVPEVLPDDMVVL-AEPDPGDMVLAIRKAI 58 (169)
Q Consensus 13 ilEAma~G~PVVat~~gg~~evl~~~~~~l-~~~d~~~la~~i~~li 58 (169)
+-||.++|+|||+ .+.-+|.+..+.+.+ +..|++++.+++.++.
T Consensus 293 i~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~vg~~~~~I~~a~~~~~ 337 (365)
T TIGR03568 293 IIEAPSFGVPTIN--IGTRQKGRLRADSVIDVDPDKEEIVKAIEKLL 337 (365)
T ss_pred HHhhhhcCCCEEe--ecCCchhhhhcCeEEEeCCCHHHHHHHHHHHh
Confidence 3899999999995 457888887776665 6669999999999854
No 106
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=92.92 E-value=0.053 Score=46.61 Aligned_cols=54 Identities=17% Similarity=0.096 Sum_probs=34.3
Q ss_pred cchHHHHHHHHcCCcEEEcCCCC----CCc-cccCCceEEeCC---CHHHHHHHHHHHHhcC
Q 030899 8 AFCIAILEAASCGLLTVSTRVGG----VPE-VLPDDMVVLAEP---DPGDMVLAIRKAISLL 61 (169)
Q Consensus 8 ~fgl~ilEAma~G~PVVat~~gg----~~e-vl~~~~~~l~~~---d~~~la~~i~~li~~~ 61 (169)
|=-.++.||+.+|+|+|+-..-| ... +...|.+...+. +.+++.++|.++++++
T Consensus 349 gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl~~~ 410 (500)
T PF00201_consen 349 GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREVLENP 410 (500)
T ss_dssp --HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHHHSH
T ss_pred cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHHHhhh
Confidence 44568999999999999876533 111 223454444443 6799999999999874
No 107
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=92.34 E-value=0.69 Score=40.16 Aligned_cols=59 Identities=17% Similarity=0.345 Sum_probs=46.3
Q ss_pred cCCCCCcchHHHHHHHHcCC----cEEEcCCCCCCccccCCceEEeCC-CHHHHHHHHHHHHhcCC
Q 030899 2 LNSLTEAFCIAILEAASCGL----LTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP 62 (169)
Q Consensus 2 ~pS~~E~fgl~ilEAma~G~----PVVat~~gg~~evl~~~~~~l~~~-d~~~la~~i~~li~~~~ 62 (169)
.+|+.||.-++..|..+|-- +.|-|...|....+.+ ..++.| |.++++++|.++++.+.
T Consensus 384 VtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~--AliVNP~d~~~va~ai~~AL~m~~ 447 (486)
T COG0380 384 VTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD--ALIVNPWDTKEVADAIKRALTMSL 447 (486)
T ss_pred eccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc--CEeECCCChHHHHHHHHHHhcCCH
Confidence 57899999999999999843 5555666666666665 446677 99999999999998754
No 108
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=91.83 E-value=0.51 Score=39.08 Aligned_cols=49 Identities=35% Similarity=0.323 Sum_probs=36.4
Q ss_pred HHH-HHHHcCCcEEEc-CCCCCCccccCCceEEeCCCHHHHHHHHHHHHhc
Q 030899 12 AIL-EAASCGLLTVST-RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISL 60 (169)
Q Consensus 12 ~il-EAma~G~PVVat-~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~ 60 (169)
.+. ||.++|+|||.- +.|.-++....+.+.++..|.+++.+++.+++.+
T Consensus 268 GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvlv~~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 268 GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVLVGTDPEAIIQAIEKALSD 318 (346)
T ss_dssp HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEEETSSHHHHHHHHHHHHH-
T ss_pred cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEEeCCCHHHHHHHHHHHHhC
Confidence 566 999999999987 4455667777777777778999999999999875
No 109
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=91.51 E-value=0.27 Score=41.43 Aligned_cols=52 Identities=15% Similarity=0.102 Sum_probs=34.9
Q ss_pred hHHHHHHHHcCCcEEEcCCCCCC---ccccC-----Cce-EEeCCCHHHHHHHHHHHHhcC
Q 030899 10 CIAILEAASCGLLTVSTRVGGVP---EVLPD-----DMV-VLAEPDPGDMVLAIRKAISLL 61 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~~---evl~~-----~~~-~l~~~d~~~la~~i~~li~~~ 61 (169)
|.+..|++++|+|+|.....+.. .+... +.. .+...+++.+++.+.++++++
T Consensus 305 Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 305 GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence 45669999999999988743321 11122 222 234457899999999988764
No 110
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=91.36 E-value=0.26 Score=40.88 Aligned_cols=53 Identities=11% Similarity=0.095 Sum_probs=34.9
Q ss_pred cchHHHHHHHHcCCcEEEcCCCCC----CccccC-CceEEeCC---CHHHHHHHHHHHHhc
Q 030899 8 AFCIAILEAASCGLLTVSTRVGGV----PEVLPD-DMVVLAEP---DPGDMVLAIRKAISL 60 (169)
Q Consensus 8 ~fgl~ilEAma~G~PVVat~~gg~----~evl~~-~~~~l~~~---d~~~la~~i~~li~~ 60 (169)
|-..++.||+++|+|+|.....+- ...+.. +.+..... +.+++.+++.+++++
T Consensus 312 gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~ 372 (401)
T cd03784 312 GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERLAAALRRLLDP 372 (401)
T ss_pred CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHhCH
Confidence 334789999999999998876542 112222 32222222 678899999988874
No 111
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=91.30 E-value=0.37 Score=44.67 Aligned_cols=90 Identities=11% Similarity=0.094 Sum_probs=60.5
Q ss_pred CcCCCCCcchHHHHHHHHcCC-------------------cEEEcCCCCCCccccCCceEEeCC-CHHHHHHHHHHHHhc
Q 030899 1 MLNSLTEAFCIAILEAASCGL-------------------LTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISL 60 (169)
Q Consensus 1 v~pS~~E~fgl~ilEAma~G~-------------------PVVat~~gg~~evl~~~~~~l~~~-d~~~la~~i~~li~~ 60 (169)
+.+|..+|+-++..|..+|.. .+|.|...|....+. + ...+.| |.++++++|.+++..
T Consensus 440 lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~-~-Ai~VNP~d~~~~a~ai~~AL~m 517 (854)
T PLN02205 440 LVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLS-G-AIRVNPWNIDAVADAMDSALEM 517 (854)
T ss_pred EeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHhC-c-CeEECCCCHHHHHHHHHHHHcC
Confidence 357889999999999998843 244555555555553 3 446677 999999999999998
Q ss_pred CC--CC-CHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 030899 61 LP--KI-DPQVMHERMKKLYNWHDVAKRTEIVYDRA 93 (169)
Q Consensus 61 ~~--~~-~~~~~~~~v~~~fsw~~~a~~~~~vy~~i 93 (169)
+. +. ..+..++++ ..++-..-++.+..-++++
T Consensus 518 ~~~Er~~R~~~~~~~v-~~~d~~~W~~~fl~~l~~~ 552 (854)
T PLN02205 518 AEPEKQLRHEKHYRYV-STHDVGYWARSFLQDLERT 552 (854)
T ss_pred CHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHH
Confidence 66 22 222333443 4467777777766655544
No 112
>PLN02670 transferase, transferring glycosyl groups
Probab=89.72 E-value=1 Score=39.03 Aligned_cols=83 Identities=7% Similarity=-0.031 Sum_probs=46.9
Q ss_pred hHHHHHHHHcCCcEEEcCCCCC----CccccC-CceEEeC-------CCHHHHHHHHHHHHhcCC-CCCHHHH---HHHH
Q 030899 10 CIAILEAASCGLLTVSTRVGGV----PEVLPD-DMVVLAE-------PDPGDMVLAIRKAISLLP-KIDPQVM---HERM 73 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~----~evl~~-~~~~l~~-------~d~~~la~~i~~li~~~~-~~~~~~~---~~~v 73 (169)
-.+++||+++|+|+|+-...+= ...+.+ +.+.-+. -+.+++.+++++++.+.+ ..+.+++ ++.+
T Consensus 367 wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~ 446 (472)
T PLN02670 367 WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLF 446 (472)
T ss_pred cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 3589999999999998776431 112222 2222221 257999999999997643 2232332 2333
Q ss_pred HhcCCHHHHHHHHHHHHHH
Q 030899 74 KKLYNWHDVAKRTEIVYDR 92 (169)
Q Consensus 74 ~~~fsw~~~a~~~~~vy~~ 92 (169)
.++=.-+.+++.+++.+.+
T Consensus 447 ~~~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 447 GDMDRNNRYVDELVHYLRE 465 (472)
T ss_pred hCcchhHHHHHHHHHHHHH
Confidence 3334444455555444433
No 113
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=89.31 E-value=1 Score=39.35 Aligned_cols=55 Identities=16% Similarity=0.030 Sum_probs=37.1
Q ss_pred cchHHHHHHHHcCCcEEEcCCCCC----Cc-cccCCceEEeCC---CHHHHHHHHHHHHhcCC
Q 030899 8 AFCIAILEAASCGLLTVSTRVGGV----PE-VLPDDMVVLAEP---DPGDMVLAIRKAISLLP 62 (169)
Q Consensus 8 ~fgl~ilEAma~G~PVVat~~gg~----~e-vl~~~~~~l~~~---d~~~la~~i~~li~~~~ 62 (169)
|=..++.||+.+|+|+|+-...+= .. +...|.+...+. +.+++.+++.++++++.
T Consensus 372 GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~~ 434 (507)
T PHA03392 372 GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVIENPK 434 (507)
T ss_pred CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHHHHHHHHHhCCHH
Confidence 334578899999999998776441 11 222343433332 67999999999998754
No 114
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=89.04 E-value=0.18 Score=42.69 Aligned_cols=71 Identities=17% Similarity=0.011 Sum_probs=43.4
Q ss_pred CCCCcchHHHHHHHHcCCcEEEcCC----CCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHH
Q 030899 4 SLTEAFCIAILEAASCGLLTVSTRV----GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMK 74 (169)
Q Consensus 4 S~~E~fgl~ilEAma~G~PVVat~~----gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~ 74 (169)
|+.+-=|--++|++++|+|||+... ..+.+-+....+++...|.+.++.++..+..+.. ..+++++...+.
T Consensus 326 Slv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 326 SLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVEDADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred cccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEECCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 4455557789999999999997543 2222333344455555667777777777776533 334444444433
No 115
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=88.08 E-value=1 Score=38.16 Aligned_cols=80 Identities=14% Similarity=0.023 Sum_probs=47.7
Q ss_pred HHHHHHHHcCCcEEEcCCCCC----CccccC-CceEEeC---CCHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHH
Q 030899 11 IAILEAASCGLLTVSTRVGGV----PEVLPD-DMVVLAE---PDPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHD 81 (169)
Q Consensus 11 l~ilEAma~G~PVVat~~gg~----~evl~~-~~~~l~~---~d~~~la~~i~~li~~~~-~~~~~~~~~~v~~~fsw~~ 81 (169)
.++.||+..|+|+|+-..++= .+.+.+ |.+.... .+.+.+.+++++++.+.. ....+...+...+.-..+.
T Consensus 311 gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~~~~~g~~~ 390 (406)
T COG1819 311 GTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLADDSYRRAAERLAEEFKEEDGPAK 390 (406)
T ss_pred chHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccHHH
Confidence 478899999999998766531 112222 2332332 378999999999999754 3333344444444444444
Q ss_pred HHHHHHHHH
Q 030899 82 VAKRTEIVY 90 (169)
Q Consensus 82 ~a~~~~~vy 90 (169)
+++.++++.
T Consensus 391 ~a~~le~~~ 399 (406)
T COG1819 391 AADLLEEFA 399 (406)
T ss_pred HHHHHHHHH
Confidence 444444443
No 116
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=82.60 E-value=4.8 Score=34.64 Aligned_cols=52 Identities=15% Similarity=0.153 Sum_probs=34.3
Q ss_pred hHHHHHHHHcCCcEEEcCCCCC----CccccC--CceEEeC--CCHHHHHHHHHHHHhcC
Q 030899 10 CIAILEAASCGLLTVSTRVGGV----PEVLPD--DMVVLAE--PDPGDMVLAIRKAISLL 61 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~----~evl~~--~~~~l~~--~d~~~la~~i~~li~~~ 61 (169)
-.+++||+++|+|+|+-...+= ...+.+ +.+.-+. .+.+++++++++++.+.
T Consensus 352 ~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~v~~av~~lm~~~ 411 (451)
T PLN02410 352 WNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAVERAVKRLMVEE 411 (451)
T ss_pred hhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHHHHHHHHHHHcCC
Confidence 3588999999999998765431 112222 2222221 27899999999998763
No 117
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=78.71 E-value=8.1 Score=33.62 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=34.6
Q ss_pred hHHHHHHHHcCCcEEEcCCCCCC----cccc-C-CceEEe-C----CCHHHHHHHHHHHHhcC
Q 030899 10 CIAILEAASCGLLTVSTRVGGVP----EVLP-D-DMVVLA-E----PDPGDMVLAIRKAISLL 61 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~~----evl~-~-~~~~l~-~----~d~~~la~~i~~li~~~ 61 (169)
-.+++||+.+|+|+|+-...+=. ..+. . +.+.-. . -+.+++.+++.+++.+.
T Consensus 366 ~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 366 WSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEE 428 (481)
T ss_pred hhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCC
Confidence 45889999999999987765421 2221 2 323222 1 26789999999998763
No 118
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=78.69 E-value=13 Score=30.80 Aligned_cols=53 Identities=6% Similarity=-0.058 Sum_probs=33.7
Q ss_pred chHHHHHHHHcCCcEEEcCCCC-C---Cc-----ccc-CCceEEeCC---CHHHHHHHHHHHHhcC
Q 030899 9 FCIAILEAASCGLLTVSTRVGG-V---PE-----VLP-DDMVVLAEP---DPGDMVLAIRKAISLL 61 (169)
Q Consensus 9 fgl~ilEAma~G~PVVat~~gg-~---~e-----vl~-~~~~~l~~~---d~~~la~~i~~li~~~ 61 (169)
=+.++.|++++|+|.|.-.... . .+ .+. .+....... +++.+.+.+.++++++
T Consensus 261 G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~ 326 (352)
T PRK12446 261 GSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNN 326 (352)
T ss_pred ChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCH
Confidence 4678999999999999775421 1 11 122 233323222 6788999999887653
No 119
>PF14851 FAM176: FAM176 family
Probab=77.60 E-value=11 Score=27.72 Aligned_cols=44 Identities=20% Similarity=0.351 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHccCchHHHHHHHHHHHHHHHH
Q 030899 82 VAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLW 130 (169)
Q Consensus 82 ~a~~~~~vy~~i~~~~~~~~~~rl~~~~~~g~~~~~~~~~~~~~~~~~~ 130 (169)
+.......|..+.+. .++..-|+-+|+-+|+++++++++..+-+
T Consensus 4 llSnsLaaya~I~~~-----PE~~aLYFv~gVC~GLlLtLcllV~risc 47 (153)
T PF14851_consen 4 LLSNSLAAYAHIRDN-----PERFALYFVSGVCAGLLLTLCLLVIRISC 47 (153)
T ss_pred HHHHHHHHHHHHHhC-----hHHHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 345567777777654 57888888999999999999988777655
No 120
>PLN03004 UDP-glycosyltransferase
Probab=77.26 E-value=3 Score=35.93 Aligned_cols=51 Identities=14% Similarity=0.164 Sum_probs=34.0
Q ss_pred hHHHHHHHHcCCcEEEcCCCC----CCcccc-C-CceEEeC------CCHHHHHHHHHHHHhc
Q 030899 10 CIAILEAASCGLLTVSTRVGG----VPEVLP-D-DMVVLAE------PDPGDMVLAIRKAISL 60 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg----~~evl~-~-~~~~l~~------~d~~~la~~i~~li~~ 60 (169)
-.+++||+++|+|+|+....+ ....+. . +.+..+. .+.+++.+++++++.+
T Consensus 362 ~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~ 424 (451)
T PLN03004 362 WNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGE 424 (451)
T ss_pred chHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcC
Confidence 358999999999999876543 222332 2 3333232 2678999999998864
No 121
>PF11167 DUF2953: Protein of unknown function (DUF2953); InterPro: IPR021338 This family of proteins has no known function.
Probab=76.47 E-value=3.1 Score=24.56 Aligned_cols=39 Identities=23% Similarity=0.265 Sum_probs=25.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCC
Q 030899 112 GAWAGKLFCLVMIIDYLLWRFLELWKPAEDIEEVPDIVLPC 152 (169)
Q Consensus 112 g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~~~~ 152 (169)
|...|.+..+...+.-++.+.+.. ++.+|.+.|+|....
T Consensus 12 gi~~G~l~~~~~~l~~~l~~~~~~--~~~~i~V~P~F~~~~ 50 (53)
T PF11167_consen 12 GILYGLLWAIKGILYGFLSRRFKI--KKPRINVNPDFNKEV 50 (53)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccC--CCCeEEEEeCCCccc
Confidence 444455555555555555555565 889999999997554
No 122
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=76.39 E-value=5.3 Score=32.31 Aligned_cols=50 Identities=22% Similarity=0.008 Sum_probs=29.8
Q ss_pred HHHHHHHHcCCcEEEcCCCCCCcc------cc-CCceEEeCCCHHHHHHHHHHHHhc
Q 030899 11 IAILEAASCGLLTVSTRVGGVPEV------LP-DDMVVLAEPDPGDMVLAIRKAISL 60 (169)
Q Consensus 11 l~ilEAma~G~PVVat~~gg~~ev------l~-~~~~~l~~~d~~~la~~i~~li~~ 60 (169)
.++.||+++|+|+|.....+..|. +. .+.+...+.+.-++.+++...+.+
T Consensus 258 ~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~~~~~~~~~~~~~ 314 (321)
T TIGR00661 258 SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKELRLLEAILDIRNM 314 (321)
T ss_pred HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhHHHHHHHHhcccc
Confidence 468899999999999887665552 22 233334443222455555444444
No 123
>PLN02562 UDP-glycosyltransferase
Probab=76.09 E-value=4.9 Score=34.51 Aligned_cols=51 Identities=18% Similarity=0.145 Sum_probs=33.7
Q ss_pred hHHHHHHHHcCCcEEEcCCCCC----CccccC--CceEEe-CCCHHHHHHHHHHHHhc
Q 030899 10 CIAILEAASCGLLTVSTRVGGV----PEVLPD--DMVVLA-EPDPGDMVLAIRKAISL 60 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~----~evl~~--~~~~l~-~~d~~~la~~i~~li~~ 60 (169)
-.+++||+.+|+|+|+....+= ...+.+ +.+.-. ..+.+++.+++++++.+
T Consensus 356 ~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~~v~~~l~~ 413 (448)
T PLN02562 356 WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEEGLRKVMED 413 (448)
T ss_pred chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHHHHHHHhCC
Confidence 4578999999999998766441 222222 222212 23788999999999865
No 124
>PLN03007 UDP-glucosyltransferase family protein
Probab=75.91 E-value=8.6 Score=33.32 Aligned_cols=52 Identities=25% Similarity=0.257 Sum_probs=33.3
Q ss_pred hHHHHHHHHcCCcEEEcCCCCCC--------ccccCCceE-E------eCC--CHHHHHHHHHHHHhcC
Q 030899 10 CIAILEAASCGLLTVSTRVGGVP--------EVLPDDMVV-L------AEP--DPGDMVLAIRKAISLL 61 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~~--------evl~~~~~~-l------~~~--d~~~la~~i~~li~~~ 61 (169)
-.+++||+++|+|+|+....+=. ++..-|... . ... +.+++.+++++++.+.
T Consensus 373 ~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 373 WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGE 441 (482)
T ss_pred chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCc
Confidence 35899999999999987664311 111112111 0 111 6789999999998764
No 125
>PLN02173 UDP-glucosyl transferase family protein
Probab=75.87 E-value=4.7 Score=34.71 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=34.1
Q ss_pred chHHHHHHHHcCCcEEEcCCCCC----CccccC--CceE-EeC------CCHHHHHHHHHHHHhc
Q 030899 9 FCIAILEAASCGLLTVSTRVGGV----PEVLPD--DMVV-LAE------PDPGDMVLAIRKAISL 60 (169)
Q Consensus 9 fgl~ilEAma~G~PVVat~~gg~----~evl~~--~~~~-l~~------~d~~~la~~i~~li~~ 60 (169)
=..+++||+++|+|+|+-..-+= ...+.+ +.+. +.. -+.+++.+++++++.+
T Consensus 344 GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~ 408 (449)
T PLN02173 344 GWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEG 408 (449)
T ss_pred ccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcC
Confidence 34689999999999998765431 112222 2222 211 1579999999999875
No 126
>PLN02208 glycosyltransferase family protein
Probab=75.40 E-value=14 Score=31.76 Aligned_cols=52 Identities=12% Similarity=0.029 Sum_probs=34.1
Q ss_pred hHHHHHHHHcCCcEEEcCCCC----CCccccC--CceEEeC------CCHHHHHHHHHHHHhcC
Q 030899 10 CIAILEAASCGLLTVSTRVGG----VPEVLPD--DMVVLAE------PDPGDMVLAIRKAISLL 61 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg----~~evl~~--~~~~l~~------~d~~~la~~i~~li~~~ 61 (169)
-.+++||+++|+|+|+-..-+ ....+.+ +.+.... -+.+++.+++.+++.+.
T Consensus 339 ~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~ 402 (442)
T PLN02208 339 PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKD 402 (442)
T ss_pred chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCC
Confidence 357899999999999876643 1122222 2222221 26689999999998754
No 127
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=75.20 E-value=9.9 Score=31.75 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=35.5
Q ss_pred hHHHHHHHHcCCcEEEcCCCCC--------CccccC-CceEEeCC---CHHHHHHHHHHHHhcCC
Q 030899 10 CIAILEAASCGLLTVSTRVGGV--------PEVLPD-DMVVLAEP---DPGDMVLAIRKAISLLP 62 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~--------~evl~~-~~~~l~~~---d~~~la~~i~~li~~~~ 62 (169)
++++.|..++|+|+|--..+.. ...+.+ +....+.. +++.+.+.|.+++++++
T Consensus 262 a~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~ 326 (357)
T COG0707 262 ALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPE 326 (357)
T ss_pred ccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHH
Confidence 5789999999999986554432 112223 33333333 47899999999998744
No 128
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=74.98 E-value=9.4 Score=31.64 Aligned_cols=52 Identities=25% Similarity=0.239 Sum_probs=35.0
Q ss_pred chHHHHHHHHcCCcEEEcCCCC---CCccccCCceEEeCCCHHHHHHHHHHHHhc
Q 030899 9 FCIAILEAASCGLLTVSTRVGG---VPEVLPDDMVVLAEPDPGDMVLAIRKAISL 60 (169)
Q Consensus 9 fgl~ilEAma~G~PVVat~~gg---~~evl~~~~~~l~~~d~~~la~~i~~li~~ 60 (169)
-|....||...|+|.|++..|- +.+.+.+.+-.+-..|++++.+.+.+....
T Consensus 256 ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~~Gll~~~~~~~ei~~~v~~~~~~ 310 (335)
T PF04007_consen 256 GGTMAREAALLGTPAISCFPGKLLAVDKYLIEKGLLYHSTDPDEIVEYVRKNLGK 310 (335)
T ss_pred CcHHHHHHHHhCCCEEEecCCcchhHHHHHHHCCCeEecCCHHHHHHHHHHhhhc
Confidence 3567789999999999986543 333444433345556899988877665543
No 129
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=74.26 E-value=13 Score=31.43 Aligned_cols=79 Identities=16% Similarity=0.050 Sum_probs=53.2
Q ss_pred HHHHHHHcCCcEEEcCC-CCCCccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 030899 12 AILEAASCGLLTVSTRV-GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVY 90 (169)
Q Consensus 12 ~ilEAma~G~PVVat~~-gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~~~~~~~~~~~v~~~fsw~~~a~~~~~vy 90 (169)
..=||-+.|+||++-+. ..-||.+..+...++..+.+.+.+++..++++.+. .+.......-|.-.+..+++.++.
T Consensus 292 iqEEAp~lg~Pvl~lR~~TERPE~v~agt~~lvg~~~~~i~~~~~~ll~~~~~---~~~m~~~~npYgdg~as~rIv~~l 368 (383)
T COG0381 292 IQEEAPSLGKPVLVLRDTTERPEGVEAGTNILVGTDEENILDAATELLEDEEF---YERMSNAKNPYGDGNASERIVEIL 368 (383)
T ss_pred hhhhHHhcCCcEEeeccCCCCccceecCceEEeCccHHHHHHHHHHHhhChHH---HHHHhcccCCCcCcchHHHHHHHH
Confidence 34589999999997554 46678777777778888999999999999987430 111122344565555666666555
Q ss_pred HHH
Q 030899 91 DRA 93 (169)
Q Consensus 91 ~~i 93 (169)
..-
T Consensus 369 ~~~ 371 (383)
T COG0381 369 LNY 371 (383)
T ss_pred HHH
Confidence 443
No 130
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=72.75 E-value=8.3 Score=32.52 Aligned_cols=23 Identities=35% Similarity=0.273 Sum_probs=17.9
Q ss_pred chHHHHHHHHcCCcEE-EcCCCCC
Q 030899 9 FCIAILEAASCGLLTV-STRVGGV 31 (169)
Q Consensus 9 fgl~ilEAma~G~PVV-at~~gg~ 31 (169)
-|.+.+|++.+|+|.| +.++..+
T Consensus 272 SGT~tLE~aL~g~P~Vv~Yk~~~i 295 (381)
T COG0763 272 SGTATLEAALAGTPMVVAYKVKPI 295 (381)
T ss_pred ccHHHHHHHHhCCCEEEEEeccHH
Confidence 5899999999999977 4455443
No 131
>PLN00414 glycosyltransferase family protein
Probab=72.24 E-value=9.9 Score=32.70 Aligned_cols=52 Identities=8% Similarity=0.034 Sum_probs=34.3
Q ss_pred hHHHHHHHHcCCcEEEcCCCC----CCcccc-C-CceEEeC------CCHHHHHHHHHHHHhcC
Q 030899 10 CIAILEAASCGLLTVSTRVGG----VPEVLP-D-DMVVLAE------PDPGDMVLAIRKAISLL 61 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg----~~evl~-~-~~~~l~~------~d~~~la~~i~~li~~~ 61 (169)
-.+++||+++|+|+|+-...+ ....+. . +.+.-.. -+.+++.+++++++.+.
T Consensus 340 ~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~ 403 (446)
T PLN00414 340 FGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKD 403 (446)
T ss_pred hhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCC
Confidence 468899999999999876543 122222 2 2222221 26789999999999753
No 132
>PLN02448 UDP-glycosyltransferase family protein
Probab=71.94 E-value=41 Score=28.92 Aligned_cols=52 Identities=10% Similarity=0.058 Sum_probs=34.5
Q ss_pred hHHHHHHHHcCCcEEEcCCCCCCc----cccC--CceE-Ee-------CCCHHHHHHHHHHHHhcC
Q 030899 10 CIAILEAASCGLLTVSTRVGGVPE----VLPD--DMVV-LA-------EPDPGDMVLAIRKAISLL 61 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~~e----vl~~--~~~~-l~-------~~d~~~la~~i~~li~~~ 61 (169)
-.+++||+++|+|+|+-...+=.. .+.+ +.+. +. ..+.+++.+++++++.+.
T Consensus 351 ~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~ 416 (459)
T PLN02448 351 WNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLE 416 (459)
T ss_pred hhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCC
Confidence 468999999999999877654221 2222 2222 21 126789999999999763
No 133
>PLN02764 glycosyltransferase family protein
Probab=71.61 E-value=19 Score=31.18 Aligned_cols=52 Identities=15% Similarity=0.017 Sum_probs=34.7
Q ss_pred hHHHHHHHHcCCcEEEcCCCCC----CccccCC-ceEEe-------CCCHHHHHHHHHHHHhcC
Q 030899 10 CIAILEAASCGLLTVSTRVGGV----PEVLPDD-MVVLA-------EPDPGDMVLAIRKAISLL 61 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~----~evl~~~-~~~l~-------~~d~~~la~~i~~li~~~ 61 (169)
-.+++||+.+|+|+|+-...+= ...+.++ ..++. .-+.+++.+++++++.+.
T Consensus 345 ~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~ 408 (453)
T PLN02764 345 FGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRD 408 (453)
T ss_pred chHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCC
Confidence 4688999999999998776431 1233222 22322 126799999999999753
No 134
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=70.97 E-value=7 Score=31.16 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=29.5
Q ss_pred HHHHHHHcCCcEEEcCCCCCCcccc------C-CceEEeCC---CHHHHHHHHHH
Q 030899 12 AILEAASCGLLTVSTRVGGVPEVLP------D-DMVVLAEP---DPGDMVLAIRK 56 (169)
Q Consensus 12 ~ilEAma~G~PVVat~~gg~~evl~------~-~~~~l~~~---d~~~la~~i~~ 56 (169)
++.||+++|+|+|.-...+..|..- + |.+...+. +++.+.+.|++
T Consensus 262 t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~ 316 (318)
T PF13528_consen 262 TISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLER 316 (318)
T ss_pred HHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhc
Confidence 4899999999999887766555332 2 22223222 67777777764
No 135
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=69.31 E-value=23 Score=31.41 Aligned_cols=75 Identities=13% Similarity=0.181 Sum_probs=48.9
Q ss_pred HHHHHHHHcCCcEEEcCCCCCC---------------cc----------ccCCceEEeCC-CHHHHHHHHHHHHhcCCCC
Q 030899 11 IAILEAASCGLLTVSTRVGGVP---------------EV----------LPDDMVVLAEP-DPGDMVLAIRKAISLLPKI 64 (169)
Q Consensus 11 l~ilEAma~G~PVVat~~gg~~---------------ev----------l~~~~~~l~~~-d~~~la~~i~~li~~~~~~ 64 (169)
=+.+||+|.|+|.|-....... ++ +..-..+.++- |.+++.++|++++..+-.
T Consensus 355 PaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVytVd~~n~~~v~~Avk~il~~~v~- 433 (559)
T PF15024_consen 355 PAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYTVDINNSTEVEAAVKAILATPVE- 433 (559)
T ss_pred CChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEEEcCCCHHHHHHHHHHHHhcCCC-
Confidence 3689999999999866543221 11 11111222333 789999999999987431
Q ss_pred CHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 030899 65 DPQVMHERMKKLYNWHDVAKRTEIVYDR 92 (169)
Q Consensus 65 ~~~~~~~~v~~~fsw~~~a~~~~~vy~~ 92 (169)
-++-..|+-+.+.+|+..+++.
T Consensus 434 ------Py~P~efT~egmLeRv~~~ie~ 455 (559)
T PF15024_consen 434 ------PYLPYEFTCEGMLERVNALIEK 455 (559)
T ss_pred ------CcCCcccCHHHHHHHHHHHHHh
Confidence 2234568889999998777653
No 136
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=66.08 E-value=15 Score=31.68 Aligned_cols=51 Identities=16% Similarity=0.183 Sum_probs=32.6
Q ss_pred hHHHHHHHHcCCcEEEcCCCCC----CccccC--C-ceEEe---C--CCHHHHHHHHHHHHhc
Q 030899 10 CIAILEAASCGLLTVSTRVGGV----PEVLPD--D-MVVLA---E--PDPGDMVLAIRKAISL 60 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~----~evl~~--~-~~~l~---~--~d~~~la~~i~~li~~ 60 (169)
..+++||+.+|+|+|+-...+= ...+.+ + ..++. . .+.+++.+++.+++.+
T Consensus 355 ~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~ 417 (455)
T PLN02152 355 WSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEE 417 (455)
T ss_pred cccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhh
Confidence 4578999999999998765431 112222 1 12221 1 1578999999999864
No 137
>PLN02167 UDP-glycosyltransferase family protein
Probab=63.87 E-value=23 Score=30.63 Aligned_cols=50 Identities=12% Similarity=0.143 Sum_probs=31.6
Q ss_pred HHHHHHHHcCCcEEEcCCCCCCc-----cccC-CceEEeC----------CCHHHHHHHHHHHHhc
Q 030899 11 IAILEAASCGLLTVSTRVGGVPE-----VLPD-DMVVLAE----------PDPGDMVLAIRKAISL 60 (169)
Q Consensus 11 l~ilEAma~G~PVVat~~gg~~e-----vl~~-~~~~l~~----------~d~~~la~~i~~li~~ 60 (169)
.+++||+++|+|+|+-...+=.. ++.. +.+.-+. -+.+++++++++++.+
T Consensus 369 nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~ 434 (475)
T PLN02167 369 NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDG 434 (475)
T ss_pred ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcC
Confidence 37899999999999876543111 1222 2222111 1578899999998864
No 138
>PLN02210 UDP-glucosyl transferase
Probab=63.77 E-value=24 Score=30.44 Aligned_cols=50 Identities=14% Similarity=0.054 Sum_probs=33.4
Q ss_pred HHHHHHHHcCCcEEEcCCCCCC----ccccC--CceEEeC-------CCHHHHHHHHHHHHhc
Q 030899 11 IAILEAASCGLLTVSTRVGGVP----EVLPD--DMVVLAE-------PDPGDMVLAIRKAISL 60 (169)
Q Consensus 11 l~ilEAma~G~PVVat~~gg~~----evl~~--~~~~l~~-------~d~~~la~~i~~li~~ 60 (169)
.+++||+++|+|+|+-...+=. ..+.+ +.+..+. -+.+++.+++++++.+
T Consensus 353 nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~ 415 (456)
T PLN02210 353 NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEG 415 (456)
T ss_pred ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcC
Confidence 4789999999999987664311 12222 3332221 2678999999999865
No 139
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=63.19 E-value=11 Score=31.64 Aligned_cols=54 Identities=28% Similarity=0.360 Sum_probs=32.9
Q ss_pred cchHHHHHHHHcCCcEE-EcCCCCC----------------CccccCCceE--E-eC-CCHHHHHHHHHHHHhcC
Q 030899 8 AFCIAILEAASCGLLTV-STRVGGV----------------PEVLPDDMVV--L-AE-PDPGDMVLAIRKAISLL 61 (169)
Q Consensus 8 ~fgl~ilEAma~G~PVV-at~~gg~----------------~evl~~~~~~--l-~~-~d~~~la~~i~~li~~~ 61 (169)
.-|.+.+|++..|+|.| +.+++.+ +.++-+.... + -. .+++.+++.+..++.+.
T Consensus 267 ~SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~ 341 (373)
T PF02684_consen 267 ASGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENP 341 (373)
T ss_pred cCCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCH
Confidence 35899999999999976 4444432 2222222110 1 11 26788888888877763
No 140
>PF06422 PDR_CDR: CDR ABC transporter; InterPro: IPR010929 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). In yeast, the PDR and CDR ABC transporters display extensive sequence homology, and confer resistance to several anti-fungal compounds by actively transporting their substrates out of the cell. These transporters have two homologous halves, each with an N-terminal intracellular hydrophilic region that contains an ATP-binding site, followed by a C-terminal membrane-associated region containing six transmembrane segments []. This entry represents a domain of the PDR/CDR ABC transporter comprising extracellular loop 3, transmembrane segment 6 and a linker region.; GO: 0005524 ATP binding, 0042626 ATPase activity, coupled to transmembrane movement of substances, 0006810 transport, 0016021 integral to membrane
Probab=62.84 E-value=15 Score=24.90 Aligned_cols=42 Identities=17% Similarity=-0.024 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcCCC
Q 030899 115 AGKLFCLVMIIDYLLWRFLELWKPAEDIEEVPDIVLPCQSDG 156 (169)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~~~~~~~~~ 156 (169)
+|++++.++.+..+.+.+++++.+.+.--...-|.+.+...+
T Consensus 52 ~GIli~f~i~f~~~~~~~~e~~~~~~~~~~~l~f~r~~~~~~ 93 (103)
T PF06422_consen 52 FGILIAFWIFFIVLTLLATEFIKFEKSGGEVLVFKRGKAPKK 93 (103)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCccEEEEeCCccchh
Confidence 466666666666667777888877777655555655444433
No 141
>PLN02555 limonoid glucosyltransferase
Probab=62.30 E-value=23 Score=30.82 Aligned_cols=51 Identities=20% Similarity=0.061 Sum_probs=32.9
Q ss_pred hHHHHHHHHcCCcEEEcCCCC----CCccccC--CceEEe------C--CCHHHHHHHHHHHHhc
Q 030899 10 CIAILEAASCGLLTVSTRVGG----VPEVLPD--DMVVLA------E--PDPGDMVLAIRKAISL 60 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg----~~evl~~--~~~~l~------~--~d~~~la~~i~~li~~ 60 (169)
-.+++||+.+|+|+|+...-+ ....+.+ +.+.-. . -+.+++.+++++++.+
T Consensus 365 ~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~ 429 (480)
T PLN02555 365 WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVG 429 (480)
T ss_pred cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcC
Confidence 457899999999999876643 1111222 222222 1 1578999999999865
No 142
>PLN02207 UDP-glycosyltransferase
Probab=60.73 E-value=15 Score=31.85 Aligned_cols=49 Identities=16% Similarity=0.139 Sum_probs=31.6
Q ss_pred HHHHHHHHcCCcEEEcCCCCC----CccccC-CceEE-e---------CC-CHHHHHHHHHHHHh
Q 030899 11 IAILEAASCGLLTVSTRVGGV----PEVLPD-DMVVL-A---------EP-DPGDMVLAIRKAIS 59 (169)
Q Consensus 11 l~ilEAma~G~PVVat~~gg~----~evl~~-~~~~l-~---------~~-d~~~la~~i~~li~ 59 (169)
.+++||+++|+|+|+-...+= ...+.+ -..++ + .. +.+++.+++++++.
T Consensus 361 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 361 NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMN 425 (468)
T ss_pred ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHh
Confidence 478999999999998766441 111222 12222 1 11 66899999999886
No 143
>PLN02554 UDP-glycosyltransferase family protein
Probab=58.64 E-value=18 Score=31.32 Aligned_cols=50 Identities=16% Similarity=0.167 Sum_probs=31.8
Q ss_pred hHHHHHHHHcCCcEEEcCCCCC----C-ccccC-CceEEeC-------------C-CHHHHHHHHHHHHh
Q 030899 10 CIAILEAASCGLLTVSTRVGGV----P-EVLPD-DMVVLAE-------------P-DPGDMVLAIRKAIS 59 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~----~-evl~~-~~~~l~~-------------~-d~~~la~~i~~li~ 59 (169)
-.+++||+.+|+|+|+-...+= . .++.. +.+.-+. . +.+++.+++++++.
T Consensus 370 ~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~ 439 (481)
T PLN02554 370 WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLME 439 (481)
T ss_pred cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhc
Confidence 3578999999999998766431 1 11222 2222211 1 67889999998885
No 144
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=55.54 E-value=23 Score=31.62 Aligned_cols=88 Identities=11% Similarity=0.012 Sum_probs=47.8
Q ss_pred chHHHHHHHHcCCcEEEcCCCCCC-----ccccC-CceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHH--hcCC
Q 030899 9 FCIAILEAASCGLLTVSTRVGGVP-----EVLPD-DMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMK--KLYN 78 (169)
Q Consensus 9 fgl~ilEAma~G~PVVat~~gg~~-----evl~~-~~~~l~~~d~~~la~~i~~li~~~~--~~~~~~~~~~v~--~~fs 78 (169)
-..+.+||+-+|+|||+--..-+. .++.. |..-++..+.++.++.-..+-++.. .+......+... .-|+
T Consensus 520 g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~vA~s~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d 599 (620)
T COG3914 520 GHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELVADSRADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFD 599 (620)
T ss_pred CccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhhcCCHHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccC
Confidence 346789999999999964211111 11111 1222344455555544444433331 112222222222 2589
Q ss_pred HHHHHHHHHHHHHHHHcC
Q 030899 79 WHDVAKRTEIVYDRALEC 96 (169)
Q Consensus 79 w~~~a~~~~~vy~~i~~~ 96 (169)
.+..+++++.+|..+.+.
T Consensus 600 ~~~far~le~~y~~M~~~ 617 (620)
T COG3914 600 PKAFARKLETLYWGMWSE 617 (620)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999988754
No 145
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=55.44 E-value=9.4 Score=30.08 Aligned_cols=17 Identities=24% Similarity=0.053 Sum_probs=15.2
Q ss_pred hHHHHHHHHcCCcEEEc
Q 030899 10 CIAILEAASCGLLTVST 26 (169)
Q Consensus 10 gl~ilEAma~G~PVVat 26 (169)
+.+-+||+..|+||++-
T Consensus 208 StvGlEAll~gkpVi~~ 224 (269)
T PF05159_consen 208 STVGLEALLHGKPVIVF 224 (269)
T ss_pred CHHHHHHHHcCCceEEe
Confidence 56889999999999985
No 146
>PLN00164 glucosyltransferase; Provisional
Probab=55.02 E-value=36 Score=29.54 Aligned_cols=50 Identities=16% Similarity=0.140 Sum_probs=32.6
Q ss_pred HHHHHHHHcCCcEEEcCCCC----CCccc-cC-CceEEeC--------CCHHHHHHHHHHHHhc
Q 030899 11 IAILEAASCGLLTVSTRVGG----VPEVL-PD-DMVVLAE--------PDPGDMVLAIRKAISL 60 (169)
Q Consensus 11 l~ilEAma~G~PVVat~~gg----~~evl-~~-~~~~l~~--------~d~~~la~~i~~li~~ 60 (169)
.+++||+++|+|+|+-..-+ ....+ .. +.+.-.. -+.+++.+++.+++.+
T Consensus 368 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~ 431 (480)
T PLN00164 368 NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGG 431 (480)
T ss_pred chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcC
Confidence 58899999999999876533 11122 22 2222221 1568999999999865
No 147
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=54.12 E-value=11 Score=27.79 Aligned_cols=21 Identities=14% Similarity=0.184 Sum_probs=17.1
Q ss_pred CcchHHHHHHHHcCCcEEEcC
Q 030899 7 EAFCIAILEAASCGLLTVSTR 27 (169)
Q Consensus 7 E~fgl~ilEAma~G~PVVat~ 27 (169)
.||--.+.+|++.|+||+++=
T Consensus 110 ~Glr~~i~~A~~~giPVLt~V 130 (159)
T PF10649_consen 110 RGLRDEIAAALAAGIPVLTAV 130 (159)
T ss_pred CCHHHHHHHHHHCCCCEEEEE
Confidence 356667899999999999863
No 148
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=53.10 E-value=39 Score=29.37 Aligned_cols=50 Identities=18% Similarity=0.326 Sum_probs=30.5
Q ss_pred hHHHHHHHHcCCcEEEcCCCC----CCcccc-C-CceEEe-C-----CCHHHHHHHHHHHHh
Q 030899 10 CIAILEAASCGLLTVSTRVGG----VPEVLP-D-DMVVLA-E-----PDPGDMVLAIRKAIS 59 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg----~~evl~-~-~~~~l~-~-----~d~~~la~~i~~li~ 59 (169)
-.+++||+++|+|+|+-...+ ....+. . +.+.-. . .+.+++.+++.+++.
T Consensus 371 ~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~ 432 (477)
T PLN02863 371 WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVS 432 (477)
T ss_pred chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhh
Confidence 358899999999999876543 111222 2 222222 1 156788888887763
No 149
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=50.94 E-value=22 Score=32.00 Aligned_cols=22 Identities=18% Similarity=0.108 Sum_probs=17.3
Q ss_pred cchHHHHHHHHcCCcEEE-cCCC
Q 030899 8 AFCIAILEAASCGLLTVS-TRVG 29 (169)
Q Consensus 8 ~fgl~ilEAma~G~PVVa-t~~g 29 (169)
+-|.+.+|++.+|+|.|+ .+++
T Consensus 495 aSGTaTLEaAL~g~PmVV~YK~s 517 (608)
T PRK01021 495 KCGTIVLETALNQTPTIVTCQLR 517 (608)
T ss_pred cCCHHHHHHHHhCCCEEEEEecC
Confidence 358999999999999774 4444
No 150
>COG4307 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.51 E-value=98 Score=25.10 Aligned_cols=43 Identities=12% Similarity=0.159 Sum_probs=34.8
Q ss_pred hcCCHHHHHH---HHHHHHHHHHcCCCCcHHHHHHHHHccCchHHH
Q 030899 75 KLYNWHDVAK---RTEIVYDRALECPNQNLVERLSRYLSCGAWAGK 117 (169)
Q Consensus 75 ~~fsw~~~a~---~~~~vy~~i~~~~~~~~~~rl~~~~~~g~~~~~ 117 (169)
.+|-|++.+. ++...++.+....+.....-|.+||..||-.+.
T Consensus 180 GHy~~drLI~d~a~~L~afralFGDeraDYaqAL~~~Y~~Gp~pdW 225 (349)
T COG4307 180 GHYYFDRLIADSADRLSAFRALFGDERADYAQALDRYYRGGPPPDW 225 (349)
T ss_pred hhHHHHHHHhhHHHHHHHHHHHhCCchhHHHHHHHHHhcCCCCCcc
Confidence 4588888864 478888999988888888899999999986644
No 151
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=49.23 E-value=30 Score=24.98 Aligned_cols=25 Identities=24% Similarity=0.247 Sum_probs=18.0
Q ss_pred HHHHHHHcCCcEE-EcCCCCCCcccc
Q 030899 12 AILEAASCGLLTV-STRVGGVPEVLP 36 (169)
Q Consensus 12 ~ilEAma~G~PVV-at~~gg~~evl~ 36 (169)
++=+-...|.||| +||+..+++.++
T Consensus 68 vi~~I~~~G~PviVAtDV~p~P~~V~ 93 (138)
T PF04312_consen 68 VIEWISEYGKPVIVATDVSPPPETVK 93 (138)
T ss_pred HHHHHHHcCCEEEEEecCCCCcHHHH
Confidence 3444557899986 899888777664
No 152
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=48.76 E-value=26 Score=29.07 Aligned_cols=50 Identities=10% Similarity=0.023 Sum_probs=33.1
Q ss_pred HHHHHHHcCC-cEEEcC-CCCCCccccCCceEEeCC--CHHHHHHHHHHHHhcC
Q 030899 12 AILEAASCGL-LTVSTR-VGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLL 61 (169)
Q Consensus 12 ~ilEAma~G~-PVVat~-~gg~~evl~~~~~~l~~~--d~~~la~~i~~li~~~ 61 (169)
.+..|+..|+ ||+-.. ...+.++++.+....+.. ++++|++.|..+.++.
T Consensus 246 K~~~al~~g~VPI~~G~~~~~~~~~~P~~SfI~~~df~s~~~La~yl~~l~~n~ 299 (349)
T PF00852_consen 246 KFWNALLAGTVPIYWGPPRPNYEEFAPPNSFIHVDDFKSPKELADYLKYLDKND 299 (349)
T ss_dssp HHHHHHHTTSEEEEES---TTHHHHS-GGGSEEGGGSSSHHHHHHHHHHHHT-H
T ss_pred HHHHHHHCCeEEEEECCEecccccCCCCCCccchhcCCCHHHHHHHHHHHhcCH
Confidence 4679999997 565431 345666777765444433 8999999999988773
No 153
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=48.73 E-value=12 Score=29.69 Aligned_cols=20 Identities=15% Similarity=0.260 Sum_probs=16.4
Q ss_pred cchHHHHHHHHcCC-cEEEcC
Q 030899 8 AFCIAILEAASCGL-LTVSTR 27 (169)
Q Consensus 8 ~fgl~ilEAma~G~-PVVat~ 27 (169)
.+..-+.|||++|| |||.++
T Consensus 248 ~~s~Rl~eal~~GcIPVii~d 268 (302)
T PF03016_consen 248 PWSRRLYEALAAGCIPVIISD 268 (302)
T ss_pred cccchHHHHhhhceeeEEecC
Confidence 36678999999997 888765
No 154
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=44.89 E-value=20 Score=25.78 Aligned_cols=52 Identities=21% Similarity=0.277 Sum_probs=29.1
Q ss_pred hHHHHHHHHcCCcEEEcCCCCCC--c-------cccCCceE-EeCC--CHHHHHHHHHHHHhcC
Q 030899 10 CIAILEAASCGLLTVSTRVGGVP--E-------VLPDDMVV-LAEP--DPGDMVLAIRKAISLL 61 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~~--e-------vl~~~~~~-l~~~--d~~~la~~i~~li~~~ 61 (169)
+.++.|++++|+|.|.-...+.. + +...+... +... +++.+.++|.+++.+.
T Consensus 82 ~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 82 AGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSDP 145 (167)
T ss_dssp CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCH
T ss_pred ccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCc
Confidence 46899999999998865554421 1 11222222 2222 4678888888887763
No 155
>PF11238 DUF3039: Protein of unknown function (DUF3039); InterPro: IPR021400 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=44.45 E-value=18 Score=22.08 Aligned_cols=15 Identities=33% Similarity=0.308 Sum_probs=13.2
Q ss_pred HHHHHHHcCCcEEEc
Q 030899 12 AILEAASCGLLTVST 26 (169)
Q Consensus 12 ~ilEAma~G~PVVat 26 (169)
.+.|++-.|.||++-
T Consensus 16 kI~esav~G~pVvAL 30 (58)
T PF11238_consen 16 KIAESAVMGTPVVAL 30 (58)
T ss_pred HHHHHHhcCceeEee
Confidence 589999999999974
No 156
>PF09753 Use1: Membrane fusion protein Use1; InterPro: IPR019150 This entry represents a family of proteins, approximately 300 residues in length, involved in vesicle transport. They have a single C-terminal transmembrane domain and a SNARE [soluble NSF (N-ethylmaleimide-sensitive fusion protein) attachment protein receptor] domain of approximately 60 residues. The SNARE domains are essential for membrane fusion and are conserved from yeasts to humans. Use1 is one of the three protein subunits that make up the SNARE complex and it is specifically required for Golgi-endoplasmic reticulum retrograde transport [].
Probab=42.04 E-value=1.6e+02 Score=23.03 Aligned_cols=24 Identities=29% Similarity=0.159 Sum_probs=11.8
Q ss_pred HHHHHHHHcc-CchHHHHHHHHHHH
Q 030899 102 VERLSRYLSC-GAWAGKLFCLVMII 125 (169)
Q Consensus 102 ~~rl~~~~~~-g~~~~~~~~~~~~~ 125 (169)
..|+..+.+. +-|+..++++++++
T Consensus 215 ~~rl~~~~~~~~~~~~~~~i~~v~~ 239 (251)
T PF09753_consen 215 SKRLKEHSSKSWGCWTWLMIFVVII 239 (251)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHH
Confidence 4477776632 22665544433333
No 157
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=39.34 E-value=64 Score=26.79 Aligned_cols=53 Identities=19% Similarity=0.083 Sum_probs=32.4
Q ss_pred chHHHHHHHHcCCcEEEcCCC---CCCccccCCceEEeCCCHHHHHHHHHHHHhcC
Q 030899 9 FCIAILEAASCGLLTVSTRVG---GVPEVLPDDMVVLAEPDPGDMVLAIRKAISLL 61 (169)
Q Consensus 9 fgl~ilEAma~G~PVVat~~g---g~~evl~~~~~~l~~~d~~~la~~i~~li~~~ 61 (169)
-|...-||+..|+|.|++.-| ++.+.+.+.+..+-..|+.+..+...+.+.++
T Consensus 260 ggTMarEaAlLGtpaIs~~pGkll~vdk~lie~G~~~~s~~~~~~~~~a~~~l~~~ 315 (346)
T COG1817 260 GGTMAREAALLGTPAISCYPGKLLAVDKYLIEKGLLYHSTDEIAIVEYAVRNLKYR 315 (346)
T ss_pred CchHHHHHHHhCCceEEecCCccccccHHHHhcCceeecCCHHHHHHHHHHHhhch
Confidence 355667999999999998844 23334333333344456665555555555543
No 158
>PF15202 Adipogenin: Adipogenin
Probab=39.04 E-value=1e+02 Score=19.49 Aligned_cols=15 Identities=13% Similarity=-0.128 Sum_probs=10.3
Q ss_pred cCCCCcccCCCCCCC
Q 030899 137 KPAEDIEEVPDIVLP 151 (169)
Q Consensus 137 ~p~~~i~~~~~~~~~ 151 (169)
.-.++-|+|-||..-
T Consensus 44 see~dsd~c~dwepw 58 (81)
T PF15202_consen 44 SEENDSDVCFDWEPW 58 (81)
T ss_pred ccccCcceeeccccc
Confidence 345677899999543
No 159
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=37.82 E-value=87 Score=24.82 Aligned_cols=78 Identities=9% Similarity=-0.051 Sum_probs=49.7
Q ss_pred HHHHcCCcEEEcCCC---CCCccccCCceEE-eCCCH--HHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHH
Q 030899 15 EAASCGLLTVSTRVG---GVPEVLPDDMVVL-AEPDP--GDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRT 86 (169)
Q Consensus 15 EAma~G~PVVat~~g---g~~evl~~~~~~l-~~~d~--~~la~~i~~li~~~~--~~~~~~~~~~v~~~fsw~~~a~~~ 86 (169)
=-|+|+-.|+..... -..+.+......+ +..|- +++.++|.-+..+++ +.+++++++.+.+..+.+.+..-+
T Consensus 163 ~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~sd~~l~~~i~~~~~~~~~a~~Ia~~~~~~~~~~L~~~~~~~Y~ 242 (256)
T smart00672 163 YILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLSMEDVYDYM 242 (256)
T ss_pred HHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCCchhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 357888777765531 1222333333332 22233 448999988887766 677888888888888888887766
Q ss_pred HHHHHH
Q 030899 87 EIVYDR 92 (169)
Q Consensus 87 ~~vy~~ 92 (169)
..++.+
T Consensus 243 ~~ll~e 248 (256)
T smart00672 243 FHLLQE 248 (256)
T ss_pred HHHHHH
Confidence 665543
No 160
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=37.41 E-value=44 Score=28.49 Aligned_cols=51 Identities=14% Similarity=0.130 Sum_probs=30.1
Q ss_pred HHHHHHHcCCcEEEcCCCC----CCc-cccCCceEEeCC---CHHHHHHHHHHHHhcCC
Q 030899 12 AILEAASCGLLTVSTRVGG----VPE-VLPDDMVVLAEP---DPGDMVLAIRKAISLLP 62 (169)
Q Consensus 12 ~ilEAma~G~PVVat~~gg----~~e-vl~~~~~~l~~~---d~~~la~~i~~li~~~~ 62 (169)
+++||+.+|+|+|+...-| ... +..++.+++... +...+.+++..++.+.+
T Consensus 366 St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~~~ 424 (496)
T KOG1192|consen 366 STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILENEE 424 (496)
T ss_pred HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcChH
Confidence 5699999999999654422 111 223344444332 22337788888877643
No 161
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=37.30 E-value=81 Score=23.89 Aligned_cols=27 Identities=11% Similarity=0.140 Sum_probs=21.0
Q ss_pred CCCCCcchHHHHHHHHcCCcEEEcCCC
Q 030899 3 NSLTEAFCIAILEAASCGLLTVSTRVG 29 (169)
Q Consensus 3 pS~~E~fgl~ilEAma~G~PVVat~~g 29 (169)
|...+...-.+-++...|+|||+.+.+
T Consensus 63 ~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 63 PVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp SSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred CCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 444556667778888999999998776
No 162
>COG3647 Predicted membrane protein [Function unknown]
Probab=35.21 E-value=1.5e+02 Score=22.24 Aligned_cols=40 Identities=20% Similarity=0.406 Sum_probs=27.0
Q ss_pred cHHHHHHHHHccCchHHHHHHHHHHHHH-HHHHHHHhhcCC
Q 030899 100 NLVERLSRYLSCGAWAGKLFCLVMIIDY-LLWRFLELWKPA 139 (169)
Q Consensus 100 ~~~~rl~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~p~ 139 (169)
+..+.+-|-+.+||+..-.|.++.++.. -.+-++||||.-
T Consensus 117 pvAewlLrr~~~gp~la~ffalf~~msiaA~YElIEWwyA~ 157 (205)
T COG3647 117 PVAEWLLRRYVRGPKLAAFFALFVAMSIAAMYELIEWWYAL 157 (205)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555567899988666665555444 466789999974
No 163
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=34.93 E-value=1e+02 Score=28.62 Aligned_cols=41 Identities=24% Similarity=0.051 Sum_probs=35.1
Q ss_pred CCCcchHHHHHHHHcCCcEEEcCCCCCCcccc--CCceEEeCC
Q 030899 5 LTEAFCIAILEAASCGLLTVSTRVGGVPEVLP--DDMVVLAEP 45 (169)
Q Consensus 5 ~~E~fgl~ilEAma~G~PVVat~~gg~~evl~--~~~~~l~~~ 45 (169)
-.|+-|.+-+=||.-|.+-|+|--|...|+.+ ++.+++..+
T Consensus 587 ~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 587 GKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred CccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 37999999999999999999999999999986 556666555
No 164
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=34.81 E-value=60 Score=26.59 Aligned_cols=51 Identities=10% Similarity=-0.038 Sum_probs=28.8
Q ss_pred hHHHHHHHHcCCcEEE--cCCC-------CCCccccCCceEEeCCCHHHHHHHHHHHHhcC
Q 030899 10 CIAILEAASCGLLTVS--TRVG-------GVPEVLPDDMVVLAEPDPGDMVLAIRKAISLL 61 (169)
Q Consensus 10 gl~ilEAma~G~PVVa--t~~g-------g~~evl~~~~~~l~~~d~~~la~~i~~li~~~ 61 (169)
+-++.|++.+++|||- .|.. ...+ ..+...|-...+.++|.++|..++.+.
T Consensus 278 SSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~pg~~~~~~~eL~~~i~~~~~~~ 337 (369)
T PF04464_consen 278 SSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDLPGPIVYNFEELIEAIENIIENP 337 (369)
T ss_dssp -THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSSSS-EESSHHHHHHHHTTHHHHH
T ss_pred hhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhCCCceeCCHHHHHHHHHhhhhCC
Confidence 3478899999999994 3332 1112 112222233347899999998887653
No 165
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=34.02 E-value=1.5e+02 Score=25.64 Aligned_cols=27 Identities=7% Similarity=-0.014 Sum_probs=20.8
Q ss_pred cCCCCCcchHHHHHHHHcCC-cEEEcCC
Q 030899 2 LNSLTEAFCIAILEAASCGL-LTVSTRV 28 (169)
Q Consensus 2 ~pS~~E~fgl~ilEAma~G~-PVVat~~ 28 (169)
.|+-.+...-.++||+..|| |||.++.
T Consensus 349 ~p~Gd~~ts~R~fdai~~gCvPViisd~ 376 (464)
T KOG1021|consen 349 CPPGDTPTSPRLFDAIVSGCVPVIISDG 376 (464)
T ss_pred CCCCCCcccHhHHHHHHhCCccEEEcCC
Confidence 35555556668999999997 8998876
No 166
>PF13263 PHP_C: PHP-associated; PDB: 2Z4G_B 2YXO_B 2YZ5_A 3DCP_B.
Probab=32.86 E-value=18 Score=21.44 Aligned_cols=43 Identities=19% Similarity=0.195 Sum_probs=14.8
Q ss_pred HHHHHHcCCcEEEcCCCCCCccccCCceEEeCC--CHHHHHHHHH
Q 030899 13 ILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP--DPGDMVLAIR 55 (169)
Q Consensus 13 ilEAma~G~PVVat~~gg~~evl~~~~~~l~~~--d~~~la~~i~ 55 (169)
.-=|...|+|+++..-.=..+.+....+.+..+ +.+++.++|.
T Consensus 8 ~~~A~~~~lp~~~gSDAH~~~~vG~~~t~~~~~~~s~~~l~~alr 52 (56)
T PF13263_consen 8 AELAEKYGLPFTGGSDAHFLEEVGRGYTEFEGPIRSPEELLEALR 52 (56)
T ss_dssp HHHHHHTT--EEEE--BSSGGGTTTTHHHH---------------
T ss_pred HHHHHHcCCCeEeEEcccChhhcCCEeeecccccccccccccccc
Confidence 334677899999543333455555554444222 5677777665
No 167
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=30.64 E-value=2.4e+02 Score=23.39 Aligned_cols=80 Identities=11% Similarity=-0.057 Sum_probs=50.3
Q ss_pred CCcchHHHHHHHHcCCcEEEc-CCCCCCccccCCceEEeCC---CHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHH
Q 030899 6 TEAFCIAILEAASCGLLTVST-RVGGVPEVLPDDMVVLAEP---DPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHD 81 (169)
Q Consensus 6 ~E~fgl~ilEAma~G~PVVat-~~gg~~evl~~~~~~l~~~---d~~~la~~i~~li~~~~~~~~~~~~~~v~~~fsw~~ 81 (169)
.+|+|. ++=.+..|+||+.+ ++.-..++...+...+.+. |...+.++=+++....+ +.+. |+-++
T Consensus 237 QQgiGn-l~lLi~~G~~v~l~r~n~fwqdl~e~gv~Vlf~~d~L~~~~v~e~~rql~~~dk--------~~I~--Ff~pn 305 (322)
T PRK02797 237 QQGIGT-LCLLIQLGKPVVLSRDNPFWQDLTEQGLPVLFTGDDLDEDIVREAQRQLASVDK--------NIIA--FFSPN 305 (322)
T ss_pred hhHHhH-HHHHHHCCCcEEEecCCchHHHHHhCCCeEEecCCcccHHHHHHHHHHHHhhCc--------ceee--ecCHh
Confidence 456664 44578999999855 6666677777776665444 34444444333333211 1222 89999
Q ss_pred HHHHHHHHHHHHHcC
Q 030899 82 VAKRTEIVYDRALEC 96 (169)
Q Consensus 82 ~a~~~~~vy~~i~~~ 96 (169)
..+.+.+++.....+
T Consensus 306 ~~~~W~~~l~~~~g~ 320 (322)
T PRK02797 306 YLQGWRNALAIAAGE 320 (322)
T ss_pred HHHHHHHHHHHhhCC
Confidence 999999998876544
No 168
>COG1983 PspC Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]
Probab=30.07 E-value=98 Score=19.63 Aligned_cols=41 Identities=20% Similarity=0.371 Sum_probs=24.1
Q ss_pred HHHHHHHHHccCchH-HHHHHHHHHHH------HHHHHHHHhhcCCCC
Q 030899 101 LVERLSRYLSCGAWA-GKLFCLVMIID------YLLWRFLELWKPAED 141 (169)
Q Consensus 101 ~~~rl~~~~~~g~~~-~~~~~~~~~~~------~~~~~~~~~~~p~~~ 141 (169)
....+..|++-.|.. ..++++..++. .+.+.++.++.|++.
T Consensus 17 VcgGla~yf~id~tlVRll~vl~~~~~~~~~~~ii~Yiia~~imP~~~ 64 (70)
T COG1983 17 VCGGLAEYFGIDPTLVRLLFVLLTLFGGLTGFGIIAYIIAALIMPSEE 64 (70)
T ss_pred eehhHHHHhCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHCCCCc
Confidence 344667777776655 44555555553 334556677777764
No 169
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=29.81 E-value=1.6e+02 Score=20.73 Aligned_cols=25 Identities=12% Similarity=0.360 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCC
Q 030899 116 GKLFCLVMIIDYLLWRFLELWKPAE 140 (169)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~p~~ 140 (169)
..+..++..+.-++..++.++.|++
T Consensus 88 ~~i~g~~~~~~G~~~i~l~~~~~~~ 112 (136)
T PF08507_consen 88 SIIIGLLLFLVGVIYIILGFFCPIK 112 (136)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3444445555556667778888877
No 170
>PRK06569 F0F1 ATP synthase subunit B'; Validated
Probab=28.35 E-value=72 Score=23.48 Aligned_cols=25 Identities=16% Similarity=0.341 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC
Q 030899 115 AGKLFCLVMIIDYLLWRFLELWKPA 139 (169)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~p~ 139 (169)
++-+|+.++.+..+++.+-.+++|+
T Consensus 10 ~sqifw~iI~FlILy~ll~kf~~pp 34 (155)
T PRK06569 10 YSQIFWLIVTFGLLYIFVYKFITPK 34 (155)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 4556666777777777777777775
No 171
>PF13169 Poxvirus_B22R_N: Poxvirus B22R protein N-terminal
Probab=28.30 E-value=1.7e+02 Score=19.46 Aligned_cols=30 Identities=13% Similarity=0.361 Sum_probs=23.8
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHcCCC
Q 030899 69 MHERMKKLYNWHDVAKRTEIVYDRALECPN 98 (169)
Q Consensus 69 ~~~~v~~~fsw~~~a~~~~~vy~~i~~~~~ 98 (169)
-+.++...|+|..+.+...+.|.+......
T Consensus 42 E~~~l~~~fnWt~I~~~V~~~F~~~C~~~s 71 (92)
T PF13169_consen 42 EKERLESKFNWTSIRESVKDEFIKKCNNNS 71 (92)
T ss_pred HHHHHHhcCChHHHHHHHHHHHHHHhcCCC
Confidence 345677889999999999999987765543
No 172
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=27.07 E-value=78 Score=25.23 Aligned_cols=25 Identities=28% Similarity=0.365 Sum_probs=18.3
Q ss_pred HHHHHHHHcCCcEEE-cCCCCCCccc
Q 030899 11 IAILEAASCGLLTVS-TRVGGVPEVL 35 (169)
Q Consensus 11 l~ilEAma~G~PVVa-t~~gg~~evl 35 (169)
+++.||-..|+|||+ .|+..-++.+
T Consensus 170 iAv~EA~klgIPVvAlvDTn~dpd~V 195 (252)
T COG0052 170 IAVKEANKLGIPVVALVDTNCDPDGV 195 (252)
T ss_pred HHHHHHHHcCCCEEEEecCCCCCccC
Confidence 689999999999996 4444444443
No 173
>COG1879 RbsB ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]
Probab=26.85 E-value=2.1e+02 Score=22.74 Aligned_cols=32 Identities=16% Similarity=0.063 Sum_probs=25.1
Q ss_pred cCCCCCcchHHHHHHHHcCCcEEEcCCCCCCc
Q 030899 2 LNSLTEAFCIAILEAASCGLLTVSTRVGGVPE 33 (169)
Q Consensus 2 ~pS~~E~fgl~ilEAma~G~PVVat~~gg~~e 33 (169)
.|.-.+++.-++-+|...|+|||+-+......
T Consensus 98 ~~~d~~~~~~~v~~a~~aGIpVv~~d~~~~~~ 129 (322)
T COG1879 98 NPVDPDALTPAVKKAKAAGIPVVTVDSDIPGP 129 (322)
T ss_pred cCCChhhhHHHHHHHHHCCCcEEEEecCCCCC
Confidence 35556777888999999999999988764443
No 174
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=26.80 E-value=83 Score=25.28 Aligned_cols=18 Identities=33% Similarity=0.624 Sum_probs=10.2
Q ss_pred CCcchHHHHHHHHcCCcEEEc
Q 030899 6 TEAFCIAILEAASCGLLTVST 26 (169)
Q Consensus 6 ~E~fgl~ilEAma~G~PVVat 26 (169)
.|.|--++ -+||+|||.+
T Consensus 191 ~e~F~~vv---~~~~vpVvia 208 (265)
T COG1830 191 PESFRRVV---AACGVPVVIA 208 (265)
T ss_pred hHHHHHHH---HhCCCCEEEe
Confidence 34444443 3577887766
No 175
>PF15586 Imm47: Immunity protein 47
Probab=25.97 E-value=2e+02 Score=19.94 Aligned_cols=36 Identities=22% Similarity=0.433 Sum_probs=21.8
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Q 030899 73 MKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRY 108 (169)
Q Consensus 73 v~~~fsw~~~a~~~~~vy~~i~~~~~~~~~~rl~~~ 108 (169)
+...|+|+.+.+.+.++.+++-...=....++|.|+
T Consensus 72 Iv~~yd~~~I~~~i~~~i~~c~~~~W~~~~~kLsr~ 107 (116)
T PF15586_consen 72 IVEEYDYDEIKKTIERIIESCEGDDWDEIAEKLSRY 107 (116)
T ss_pred EEecCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHh
Confidence 445578877777777777766443333344555555
No 176
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=25.84 E-value=75 Score=22.41 Aligned_cols=10 Identities=10% Similarity=0.252 Sum_probs=0.4
Q ss_pred cCCCCcccCC
Q 030899 137 KPAEDIEEVP 146 (169)
Q Consensus 137 ~p~~~i~~~~ 146 (169)
.-+...|..|
T Consensus 92 ~Kk~~~~~~p 101 (122)
T PF01102_consen 92 RKKSSSDVQP 101 (122)
T ss_dssp S---------
T ss_pred hccCCCCCCC
Confidence 3344444444
No 177
>PF10999 DUF2839: Protein of unknown function (DUF2839); InterPro: IPR021262 This bacterial family of unknown function appear to be restricted to Cyanobacteria.
Probab=25.61 E-value=94 Score=19.57 Aligned_cols=14 Identities=21% Similarity=0.631 Sum_probs=9.5
Q ss_pred HHHHHHccCchHHH
Q 030899 104 RLSRYLSCGAWAGK 117 (169)
Q Consensus 104 rl~~~~~~g~~~~~ 117 (169)
.+..+.-.|+|.|+
T Consensus 35 ~~~~~ttkg~w~gi 48 (68)
T PF10999_consen 35 QFYKLTTKGPWIGI 48 (68)
T ss_pred HHHHHhhcccchhH
Confidence 34445567999987
No 178
>PF06345 Drf_DAD: DRF Autoregulatory Domain; InterPro: IPR010465 This domain is found in Diaphanous-related formins (Drfs). It binds the N-terminal GTPase-binding domain; this link is broken when GTP-bound Rho binds to the GBD and activates the protein. The addition of diaphanous activating domains (DAD) to mammalian cells induces actin filament formation, stabilises microtubules, and activates serum-response mediated transcription [].; PDB: 3O4X_H 3OBV_E 2BAP_C 2F31_B.
Probab=25.38 E-value=64 Score=13.84 Aligned_cols=10 Identities=40% Similarity=0.564 Sum_probs=7.7
Q ss_pred HHHHHHHcCC
Q 030899 12 AILEAASCGL 21 (169)
Q Consensus 12 ~ilEAma~G~ 21 (169)
+++||+..|.
T Consensus 5 sllealqtg~ 14 (15)
T PF06345_consen 5 SLLEALQTGS 14 (15)
T ss_dssp HHHHHHHHST
T ss_pred HHHHHHHccC
Confidence 5789988774
No 179
>KOG3894 consensus SNARE protein Syntaxin 18/UFE1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.19 E-value=1.3e+02 Score=24.83 Aligned_cols=37 Identities=8% Similarity=0.116 Sum_probs=22.4
Q ss_pred HHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhhcC
Q 030899 102 VERLSRYLSCGAWAGKLFCLVMIIDYLLWRFLELWKP 138 (169)
Q Consensus 102 ~~rl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~p 138 (169)
.+.+.+....+...+....+.+++.-+.+-||+|.+|
T Consensus 280 Ne~irka~~~~~~~r~~~lf~llvlsf~lLFldwy~~ 316 (316)
T KOG3894|consen 280 NEEIRKAKRNNGGLRVFLLFFLLVLSFSLLFLDWYYK 316 (316)
T ss_pred HHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhhcCC
Confidence 3455555544444445455556666677778999775
No 180
>KOG1053 consensus Glutamate-gated NMDA-type ion channel receptor subunit GRIN2A and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=24.90 E-value=87 Score=29.83 Aligned_cols=25 Identities=16% Similarity=0.390 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCC
Q 030899 116 GKLFCLVMIIDYLLWRFLELWKPAE 140 (169)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~p~~ 140 (169)
-++|+++.++..+..+++||+.|-.
T Consensus 568 VmmFVm~livaai~vFlFEy~SPvg 592 (1258)
T KOG1053|consen 568 VMMFVMCLIVAAITVFLFEYFSPVG 592 (1258)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCccc
Confidence 4678889999999999999999954
No 181
>PF10856 DUF2678: Protein of unknown function (DUF2678); InterPro: IPR022564 This family of proteins has no known function.
Probab=24.77 E-value=47 Score=23.24 Aligned_cols=29 Identities=17% Similarity=0.513 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcccCCCC
Q 030899 118 LFCLVMIIDYLLWRFLELWKPAEDIEEVPDI 148 (169)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~ 148 (169)
.|+++.++..+-..+|-|||=+-++| |+|
T Consensus 63 ffavcI~l~~~s~~lLI~WYR~gdl~--Pkf 91 (118)
T PF10856_consen 63 FFAVCILLICISAILLIFWYRQGDLD--PKF 91 (118)
T ss_pred ehHHHHHHHHHHHHhheeehhcCCCC--hhH
Confidence 56677777777888899999888877 665
No 182
>PRK14472 F0F1 ATP synthase subunit B; Provisional
Probab=24.73 E-value=87 Score=23.07 Aligned_cols=27 Identities=11% Similarity=0.074 Sum_probs=13.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHhhcC
Q 030899 112 GAWAGKLFCLVMIIDYLLWRFLELWKP 138 (169)
Q Consensus 112 g~~~~~~~~~~~~~~~~~~~~~~~~~p 138 (169)
+|.++.+|+.++.+..+++.+.-|+||
T Consensus 15 ~~~~~~~~~~~i~Flil~~lL~~~l~k 41 (175)
T PRK14472 15 SPNPGLIFWTAVTFVIVLLILKKIAWG 41 (175)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 444455555555555444444455554
No 183
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=24.52 E-value=1e+02 Score=26.06 Aligned_cols=83 Identities=10% Similarity=0.005 Sum_probs=52.3
Q ss_pred HHHHHHcCCcEEEcCCC---CCCccccCCceEE-eCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHH
Q 030899 13 ILEAASCGLLTVSTRVG---GVPEVLPDDMVVL-AEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAK 84 (169)
Q Consensus 13 ilEAma~G~PVVat~~g---g~~evl~~~~~~l-~~~--d~~~la~~i~~li~~~~--~~~~~~~~~~v~~~fsw~~~a~ 84 (169)
+-=-|+||-.|+..+.. -..+.+......+ +.. +..++.++|..+.++++ +.+++++++.+.+..+.+.+..
T Consensus 230 lkylL~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~~ 309 (395)
T PF05686_consen 230 LKYLLACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVEWLNAHDDEAQRIAENGQRFAREYLTMEDVYC 309 (395)
T ss_pred HHHHHcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhhhcccChHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 33448889888875432 1122233333332 233 67888888887777665 6788888888888888888876
Q ss_pred HHHHH---HHHHHc
Q 030899 85 RTEIV---YDRALE 95 (169)
Q Consensus 85 ~~~~v---y~~i~~ 95 (169)
-+..+ |.+++.
T Consensus 310 Y~~~LL~eYa~l~~ 323 (395)
T PF05686_consen 310 YWRRLLLEYAKLLR 323 (395)
T ss_pred HHHHHHHHHHHHhC
Confidence 55444 444544
No 184
>PRK09174 F0F1 ATP synthase subunit B'; Validated
Probab=24.28 E-value=72 Score=24.44 Aligned_cols=25 Identities=16% Similarity=0.259 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC
Q 030899 115 AGKLFCLVMIIDYLLWRFLELWKPA 139 (169)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~p~ 139 (169)
.+-++++++.+..|++.+-.++||+
T Consensus 53 ~~~l~w~~I~FliL~~lL~k~~~~p 77 (204)
T PRK09174 53 ASQLLWLAITFGLFYLFMSRVILPR 77 (204)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666666666664
No 185
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=23.92 E-value=3.4e+02 Score=25.21 Aligned_cols=61 Identities=21% Similarity=0.309 Sum_probs=48.8
Q ss_pred cCCCCCcchHHHHHHHHcC----CcEEEcCCCCCCccccCCceEEeCCCHHHHHHHHHHHHhcCC
Q 030899 2 LNSLTEAFCIAILEAASCG----LLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP 62 (169)
Q Consensus 2 ~pS~~E~fgl~ilEAma~G----~PVVat~~gg~~evl~~~~~~l~~~d~~~la~~i~~li~~~~ 62 (169)
..|+.+|..++.+|...|. .+.|.+..-|..+.++++...+-+-|.+.++.++..+++...
T Consensus 378 v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~ 442 (732)
T KOG1050|consen 378 VTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSD 442 (732)
T ss_pred ecccccccchhhhHHHHhhcccCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCH
Confidence 3577899999999999885 567777777778888777765555599999999999998765
No 186
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=23.76 E-value=1.5e+02 Score=25.46 Aligned_cols=51 Identities=12% Similarity=0.182 Sum_probs=31.2
Q ss_pred HHHHHHHcCCcEEEcCCC----CCCccccCCce-EEeCC-CHHHHHHHHHHHHhcCC
Q 030899 12 AILEAASCGLLTVSTRVG----GVPEVLPDDMV-VLAEP-DPGDMVLAIRKAISLLP 62 (169)
Q Consensus 12 ~ilEAma~G~PVVat~~g----g~~evl~~~~~-~l~~~-d~~~la~~i~~li~~~~ 62 (169)
+++=|++.|+|+|+-... |+-+.+.-... .-... +.+++.+.+.+++++.+
T Consensus 338 a~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r~ 394 (426)
T PRK10017 338 SAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLP 394 (426)
T ss_pred HHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhCHH
Confidence 467789999999965442 22233322221 11222 67889999999888743
No 187
>PLN03015 UDP-glucosyl transferase
Probab=23.74 E-value=64 Score=28.08 Aligned_cols=50 Identities=16% Similarity=0.221 Sum_probs=31.4
Q ss_pred hHHHHHHHHcCCcEEEcCCCCC----Cccc-cC-CceEEeC-------CCHHHHHHHHHHHHh
Q 030899 10 CIAILEAASCGLLTVSTRVGGV----PEVL-PD-DMVVLAE-------PDPGDMVLAIRKAIS 59 (169)
Q Consensus 10 gl~ilEAma~G~PVVat~~gg~----~evl-~~-~~~~l~~-------~d~~~la~~i~~li~ 59 (169)
-.+++||+++|+|+|+-...+= ...+ .. +.+.-.. -+.+++.+++++++.
T Consensus 363 wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~ 425 (470)
T PLN03015 363 WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVA 425 (470)
T ss_pred chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHc
Confidence 3588999999999998766431 1112 11 1121121 156889999999885
No 188
>PF10767 DUF2593: Protein of unknown function (DUF2593); InterPro: IPR019703 This entry represents proteins that appear to be restricted to Enterobacteriaceae. Some members are annotated as YbjO, however there is currently no known function.
Probab=23.15 E-value=99 Score=22.33 Aligned_cols=22 Identities=27% Similarity=0.691 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC
Q 030899 118 LFCLVMIIDYLLWRFLELWKPA 139 (169)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~p~ 139 (169)
+.+=+.++.|++..-+.|+||+
T Consensus 80 l~~Q~~v~~Yml~ASlg~~~Pe 101 (144)
T PF10767_consen 80 LACQILVVGYMLMASLGWFYPE 101 (144)
T ss_pred HHHHHHHHHHHHHHHhccCCcc
Confidence 4444577889999999999986
No 189
>PF03918 CcmH: Cytochrome C biogenesis protein; InterPro: IPR005616 Members of this family include NrfF, CcmH, CycL, Ccl2.; PDB: 2KW0_A 2HL7_A.
Probab=22.40 E-value=88 Score=22.74 Aligned_cols=67 Identities=15% Similarity=0.131 Sum_probs=19.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHH-HHcCCCCcHHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 030899 66 PQVMHERMKKLYNWHDVAKRTEIVYDR-ALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLWRFLELWKPA 139 (169)
Q Consensus 66 ~~~~~~~v~~~fsw~~~a~~~~~vy~~-i~~~~~~~~~~rl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~ 139 (169)
....++.+.+-.|-+.+.+.+.+-|-+ ++-.+..+.. ..-.|.+++.++++.+..++..+-.|-.+.
T Consensus 63 R~~I~~~l~~G~s~~eI~~~~v~rYG~~Vl~~Pp~~~~-------~~~lW~~P~~~l~~g~~~~~~~~rr~~~~~ 130 (148)
T PF03918_consen 63 RREIREMLAEGKSDEEIIDYFVERYGEFVLYEPPFKGF-------TWLLWLGPFLLLLLGGALLFRRLRRWRRRA 130 (148)
T ss_dssp HHHHHHHHHHT--HHHHHHHHHHHHTTT-EES--S----------------------------------------
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHhcCcceeecCCCCcc-------HHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 444556677778888888888888854 4444433211 122444444444444444444444443333
No 190
>TIGR00746 arcC carbamate kinase. The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff.
Probab=22.17 E-value=2.4e+02 Score=23.17 Aligned_cols=49 Identities=22% Similarity=0.285 Sum_probs=33.1
Q ss_pred HHHHHHHcCCcEEEcCCCCCCccccCCceE-E-eCCCHHHHHHHHHHHHhc
Q 030899 12 AILEAASCGLLTVSTRVGGVPEVLPDDMVV-L-AEPDPGDMVLAIRKAISL 60 (169)
Q Consensus 12 ~ilEAma~G~PVVat~~gg~~evl~~~~~~-l-~~~d~~~la~~i~~li~~ 60 (169)
++-..+..|.+||++-.||+|-+-.++... . ..-|.+.++..+...++-
T Consensus 174 ~I~~LL~~G~iVI~~ggggiPvi~e~~~~~g~e~~id~D~lAa~lA~~l~A 224 (310)
T TIGR00746 174 TIKTLVENGVIVISSGGGGVPVVLEGAELKGVEAVIDKDLASEKLAEEVNA 224 (310)
T ss_pred HHHHHHHCCCEEEeCCCCCcCEEecCCeEEeeEecCCHHHHHHHHHHHhCC
Confidence 333477899999999999988655443221 1 123778888888777764
No 191
>PLN02534 UDP-glycosyltransferase
Probab=22.15 E-value=76 Score=27.76 Aligned_cols=22 Identities=9% Similarity=0.011 Sum_probs=18.1
Q ss_pred cchHHHHHHHHcCCcEEEcCCC
Q 030899 8 AFCIAILEAASCGLLTVSTRVG 29 (169)
Q Consensus 8 ~fgl~ilEAma~G~PVVat~~g 29 (169)
+=..+++||+++|+|+|+-...
T Consensus 370 ~G~ns~~ea~~~GvP~v~~P~~ 391 (491)
T PLN02534 370 CGWNSTIEGICSGVPMITWPLF 391 (491)
T ss_pred CccHHHHHHHHcCCCEEecccc
Confidence 3456899999999999987664
No 192
>KOG4677 consensus Golgi integral membrane protein [Intracellular trafficking, secretion, and vesicular transport; General function prediction only]
Probab=22.06 E-value=1.9e+02 Score=25.31 Aligned_cols=34 Identities=18% Similarity=-0.027 Sum_probs=27.3
Q ss_pred HHHHHHccCchHHHHHHHHHHHHHHHHHHHHhhc
Q 030899 104 RLSRYLSCGAWAGKLFCLVMIIDYLLWRFLELWK 137 (169)
Q Consensus 104 rl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (169)
++..+.+.-|.+.+.+.+..++.+||++|.-.=|
T Consensus 516 ~l~~~lr~~psArif~~~YmallHLWvmivlLTY 549 (554)
T KOG4677|consen 516 ELEKILRLLPSARIFWKNYMALLHLWVMIVLLTY 549 (554)
T ss_pred HHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhhc
Confidence 6667778889999999999999999988764433
No 193
>PRK13453 F0F1 ATP synthase subunit B; Provisional
Probab=21.53 E-value=1.1e+02 Score=22.61 Aligned_cols=27 Identities=19% Similarity=0.068 Sum_probs=13.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHhhcC
Q 030899 112 GAWAGKLFCLVMIIDYLLWRFLELWKP 138 (169)
Q Consensus 112 g~~~~~~~~~~~~~~~~~~~~~~~~~p 138 (169)
|+-.+.+++.++.+..+++.+-.|+||
T Consensus 15 ~~~~~t~~~~iInFliL~~lL~~~l~~ 41 (173)
T PRK13453 15 GVEWGTVIVTVLTFIVLLALLKKFAWG 41 (173)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443344554444455555555555554
No 194
>PF00863 Peptidase_C4: Peptidase family C4 This family belongs to family C4 of the peptidase classification.; InterPro: IPR001730 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. Nuclear inclusion A (NIA) proteases from potyviruses are cysteine peptidases belong to the MEROPS peptidase family C4 (NIa protease family, clan PA(C)) [, ]. Potyviruses include plant viruses in which the single-stranded RNA encodes a polyprotein with NIA protease activity, where proteolytic cleavage is specific for Gln+Gly sites. The NIA protease acts on the polyprotein, releasing itself by Gln+Gly cleavage at both the N- and C-termini. It further processes the polyprotein by cleavage at five similar sites in the C-terminal half of the sequence. In addition to its C-terminal protease activity, the NIA protease contains an N-terminal domain that has been implicated in the transcription process []. This peptidase is present in the nuclear inclusion protein of potyviruses.; GO: 0008234 cysteine-type peptidase activity, 0006508 proteolysis; PDB: 3MMG_B 1Q31_B 1LVB_A 1LVM_A.
Probab=21.26 E-value=50 Score=26.02 Aligned_cols=13 Identities=54% Similarity=0.830 Sum_probs=8.5
Q ss_pred HcCCcEEEcCCCC
Q 030899 18 SCGLLTVSTRVGG 30 (169)
Q Consensus 18 a~G~PVVat~~gg 30 (169)
-||+|+|++..|-
T Consensus 152 ~CG~PlVs~~Dg~ 164 (235)
T PF00863_consen 152 DCGLPLVSTKDGK 164 (235)
T ss_dssp -TT-EEEETTT--
T ss_pred ccCCcEEEcCCCc
Confidence 4999999998774
No 195
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=21.25 E-value=1.3e+02 Score=25.53 Aligned_cols=46 Identities=15% Similarity=0.219 Sum_probs=33.6
Q ss_pred HHHHcC-CcEEEcCCCCCCccccCCceEEeCC--CHHHHHHHHHHHHhcC
Q 030899 15 EAASCG-LLTVSTRVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLL 61 (169)
Q Consensus 15 EAma~G-~PVVat~~gg~~evl~~~~~~l~~~--d~~~la~~i~~li~~~ 61 (169)
-|+-.| +|||-.. +-..+.++++....+++ ++++|+..|+++-+++
T Consensus 272 ~al~~gsVPVvlg~-~n~e~fvP~~SfI~vdDF~s~~ela~ylk~L~~n~ 320 (372)
T KOG2619|consen 272 NALDAGSVPVVLGP-PNYENFVPPDSFIHVDDFQSPQELAAYLKKLDKNP 320 (372)
T ss_pred hhhhcCcccEEECC-ccccccCCCcceEehhhcCCHHHHHHHHHHhhcCH
Confidence 345555 5888766 66777888666555554 8999999999988773
No 196
>PRK14471 F0F1 ATP synthase subunit B; Provisional
Probab=21.13 E-value=1.2e+02 Score=22.06 Aligned_cols=24 Identities=17% Similarity=0.199 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC
Q 030899 116 GKLFCLVMIIDYLLWRFLELWKPA 139 (169)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~p~ 139 (169)
+.+++.++.+..+++.+-.|+||+
T Consensus 9 ~~~~~~~i~Flil~~ll~~~l~~p 32 (164)
T PRK14471 9 GLFFWQTILFLILLLLLAKFAWKP 32 (164)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHH
Confidence 445555555555555555666654
No 197
>PF08172 CASP_C: CASP C terminal; InterPro: IPR012955 This domain is the C-terminal region of the CASP family of proteins. These are Golgi membrane proteins which are thought to have a role in vesicle transport [].; GO: 0006891 intra-Golgi vesicle-mediated transport, 0030173 integral to Golgi membrane
Probab=21.03 E-value=4e+02 Score=21.08 Aligned_cols=55 Identities=20% Similarity=0.252 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHcC-------------CCCcHHHHH----HHHHccCchHHHHHHHHHHHHHHHHHHHHhh
Q 030899 82 VAKRTEIVYDRALEC-------------PNQNLVERL----SRYLSCGAWAGKLFCLVMIIDYLLWRFLELW 136 (169)
Q Consensus 82 ~a~~~~~vy~~i~~~-------------~~~~~~~rl----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 136 (169)
...+|.+.|++-++. ...+..+|+ .|+.-.-..+..+|++.+++.|+++++.-++
T Consensus 168 e~~rY~~~YE~~l~PF~~F~~~E~~R~~~~L~~~eR~~ls~~r~vL~nr~~R~~f~~Y~l~LH~lvf~~l~~ 239 (248)
T PF08172_consen 168 ESNRYSSAYEESLNPFAAFRKRERQRRYKRLSPPERIFLSLTRFVLSNRTTRMLFFFYCLGLHLLVFFVLYY 239 (248)
T ss_pred hHHHHHHHHHhccChHHHHhHhhHHHHHhcCChHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 345888888865542 112233443 4444444555677777777777777665554
No 198
>PRK14986 glycogen phosphorylase; Provisional
Probab=20.62 E-value=99 Score=28.95 Aligned_cols=48 Identities=23% Similarity=0.165 Sum_probs=39.2
Q ss_pred CCcchHHHHHHHHcCCcEEEcCCCCCCccccC--CceEEeCC-CHHHHHHH
Q 030899 6 TEAFCIAILEAASCGLLTVSTRVGGVPEVLPD--DMVVLAEP-DPGDMVLA 53 (169)
Q Consensus 6 ~E~fgl~ilEAma~G~PVVat~~gg~~evl~~--~~~~l~~~-d~~~la~~ 53 (169)
.|+-|.+-+=||.-|.+.++|--|...|+..+ +.+++... +.+++.+.
T Consensus 653 ~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~~~ev~~~ 703 (815)
T PRK14986 653 TEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEVEAL 703 (815)
T ss_pred ccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCCHHHHHHH
Confidence 79999999999999999999999999999875 55665554 66665543
No 199
>COG0711 AtpF F0F1-type ATP synthase, subunit b [Energy production and conversion]
Probab=20.14 E-value=1.3e+02 Score=22.01 Aligned_cols=22 Identities=14% Similarity=0.301 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC
Q 030899 118 LFCLVMIIDYLLWRFLELWKPA 139 (169)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~p~ 139 (169)
+++.++.+..+++.+..|+||+
T Consensus 9 ~~~~~i~F~ill~ll~~~~~~p 30 (161)
T COG0711 9 ILWQLIAFVILLWLLKKFVWKP 30 (161)
T ss_pred HHHHHHHHHHHHHHHHHHhHHH
Confidence 4555555555566666666664
Done!