Query 030904
Match_columns 169
No_of_seqs 140 out of 1544
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 06:20:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030904.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030904hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 1.2E-30 2.6E-35 168.7 11.4 141 14-162 50-195 (226)
2 KOG4412 26S proteasome regulat 100.0 1.2E-30 2.7E-35 168.7 7.9 120 36-162 37-162 (226)
3 KOG0509 Ankyrin repeat and DHH 99.9 2.4E-26 5.3E-31 172.7 10.4 131 12-152 55-186 (600)
4 PHA02791 ankyrin-like protein; 99.9 7E-25 1.5E-29 156.7 14.8 135 15-161 74-216 (284)
5 KOG0509 Ankyrin repeat and DHH 99.9 1.9E-25 4.1E-30 168.0 12.2 140 15-164 91-236 (600)
6 PHA02791 ankyrin-like protein; 99.9 9.4E-25 2E-29 156.0 14.7 133 15-161 43-182 (284)
7 PHA02878 ankyrin repeat protei 99.9 1.2E-24 2.5E-29 166.9 14.8 141 15-165 147-294 (477)
8 PHA02875 ankyrin repeat protei 99.9 6.9E-24 1.5E-28 160.0 14.7 117 36-160 101-223 (413)
9 PHA02875 ankyrin repeat protei 99.9 7.4E-24 1.6E-28 159.8 14.8 137 16-162 49-191 (413)
10 PHA02878 ankyrin repeat protei 99.9 6.6E-24 1.4E-28 162.7 14.7 142 11-162 46-258 (477)
11 KOG0508 Ankyrin repeat protein 99.9 1.4E-24 3E-29 158.6 9.8 138 12-160 94-236 (615)
12 PHA02874 ankyrin repeat protei 99.9 1.4E-23 3.1E-28 159.2 15.4 144 15-161 104-277 (434)
13 PHA03100 ankyrin repeat protei 99.9 9.9E-24 2.1E-28 161.9 14.3 139 14-162 155-306 (480)
14 PHA03095 ankyrin-like protein; 99.9 1.6E-23 3.4E-28 160.4 14.9 143 10-162 22-177 (471)
15 PHA02859 ankyrin repeat protei 99.9 2.5E-23 5.3E-28 143.4 13.7 137 13-162 32-182 (209)
16 PHA02946 ankyin-like protein; 99.9 2.6E-23 5.6E-28 157.7 14.5 115 12-130 49-166 (446)
17 PHA02874 ankyrin repeat protei 99.9 3.2E-23 6.8E-28 157.3 15.0 142 12-162 45-213 (434)
18 PHA02716 CPXV016; CPX019; EVM0 99.9 2.1E-23 4.6E-28 164.2 13.7 127 15-151 192-359 (764)
19 PHA02859 ankyrin repeat protei 99.9 4.9E-23 1.1E-27 142.0 13.8 131 13-152 64-200 (209)
20 PHA02716 CPXV016; CPX019; EVM0 99.9 5.1E-23 1.1E-27 162.1 14.5 143 11-162 151-342 (764)
21 PHA02741 hypothetical protein; 99.9 5.5E-23 1.2E-27 137.4 11.8 122 33-161 17-154 (169)
22 PHA02795 ankyrin-like protein; 99.9 7.7E-23 1.7E-27 152.0 13.3 139 13-163 129-286 (437)
23 PHA03100 ankyrin repeat protei 99.9 8.6E-23 1.9E-27 156.7 14.0 142 11-162 44-199 (480)
24 PHA02743 Viral ankyrin protein 99.9 7.1E-23 1.5E-27 136.4 11.1 121 34-162 17-151 (166)
25 PHA03095 ankyrin-like protein; 99.9 2.8E-22 6E-27 153.5 14.5 139 14-162 166-313 (471)
26 PHA02798 ankyrin-like protein; 99.9 3.1E-22 6.7E-27 153.9 13.9 113 14-129 50-173 (489)
27 PHA02798 ankyrin-like protein; 99.9 3.1E-22 6.7E-27 153.9 13.8 139 12-162 15-171 (489)
28 PHA02989 ankyrin repeat protei 99.9 4.3E-22 9.3E-27 153.3 14.4 146 13-161 86-278 (494)
29 PHA02946 ankyin-like protein; 99.9 6.6E-22 1.4E-26 150.1 14.0 106 48-162 151-266 (446)
30 PLN03192 Voltage-dependent pot 99.9 6.1E-22 1.3E-26 160.1 14.3 138 13-162 536-678 (823)
31 PHA02989 ankyrin repeat protei 99.9 8.5E-22 1.8E-26 151.7 14.0 139 14-162 123-312 (494)
32 KOG0512 Fetal globin-inducing 99.9 7.6E-22 1.7E-26 127.3 10.0 113 41-160 67-185 (228)
33 PHA02730 ankyrin-like protein; 99.9 1.4E-21 3E-26 151.7 13.3 140 13-163 357-522 (672)
34 PHA02876 ankyrin repeat protei 99.9 2.5E-21 5.5E-26 154.2 14.4 137 14-160 354-495 (682)
35 KOG0508 Ankyrin repeat protein 99.9 6.7E-22 1.5E-26 144.7 9.3 144 11-162 51-206 (615)
36 PHA02876 ankyrin repeat protei 99.9 4.9E-21 1.1E-25 152.5 14.9 146 14-162 286-466 (682)
37 PHA02917 ankyrin-like protein; 99.9 4.9E-21 1.1E-25 150.8 14.0 141 14-164 47-256 (661)
38 PHA02884 ankyrin repeat protei 99.9 3.5E-21 7.6E-26 138.0 11.8 106 39-152 35-145 (300)
39 KOG0502 Integral membrane anky 99.9 6.2E-22 1.4E-26 132.3 7.3 123 31-161 154-280 (296)
40 KOG0195 Integrin-linked kinase 99.9 1.5E-21 3.3E-26 135.5 9.4 117 31-155 28-144 (448)
41 PHA02736 Viral ankyrin protein 99.9 1.9E-21 4.1E-26 128.2 8.9 123 33-162 13-149 (154)
42 KOG0510 Ankyrin repeat protein 99.9 5.1E-21 1.1E-25 147.7 12.2 146 10-162 233-400 (929)
43 PHA02884 ankyrin repeat protei 99.9 1.9E-20 4.1E-25 134.2 13.6 138 13-163 44-186 (300)
44 PHA02795 ankyrin-like protein; 99.9 1.9E-20 4.1E-25 139.4 13.4 144 9-162 84-244 (437)
45 PF12796 Ank_2: Ankyrin repeat 99.9 2.7E-20 5.8E-25 111.7 11.4 85 41-130 1-85 (89)
46 PHA02743 Viral ankyrin protein 99.9 2.2E-20 4.8E-25 124.4 12.1 119 17-145 39-162 (166)
47 KOG0510 Ankyrin repeat protein 99.8 1.4E-20 3.1E-25 145.2 11.5 146 13-166 198-368 (929)
48 KOG4177 Ankyrin [Cell wall/mem 99.8 8.7E-21 1.9E-25 152.9 10.0 143 11-163 483-630 (1143)
49 PHA02917 ankyrin-like protein; 99.8 9.9E-20 2.1E-24 143.5 14.2 147 10-166 7-224 (661)
50 KOG0512 Fetal globin-inducing 99.8 1E-19 2.2E-24 117.5 9.6 126 18-152 79-206 (228)
51 KOG4177 Ankyrin [Cell wall/mem 99.8 6.9E-20 1.5E-24 147.8 10.2 138 10-152 515-652 (1143)
52 PHA02730 ankyrin-like protein; 99.8 3.4E-19 7.3E-24 138.6 13.2 149 10-163 15-179 (672)
53 PHA02792 ankyrin-like protein; 99.8 6.1E-19 1.3E-23 136.0 13.5 138 13-162 319-476 (631)
54 KOG0502 Integral membrane anky 99.8 2.1E-19 4.5E-24 120.3 8.8 120 34-163 126-250 (296)
55 KOG0505 Myosin phosphatase, re 99.8 1.3E-18 2.8E-23 129.1 11.3 136 16-161 54-253 (527)
56 PLN03192 Voltage-dependent pot 99.8 2.9E-18 6.3E-23 138.9 14.4 118 34-161 522-644 (823)
57 KOG4214 Myotrophin and similar 99.8 2.8E-18 6.1E-23 99.8 8.6 102 41-151 6-107 (117)
58 cd00204 ANK ankyrin repeats; 99.8 1.4E-17 3E-22 105.3 12.4 117 34-158 4-125 (126)
59 PHA02741 hypothetical protein; 99.8 6.7E-18 1.5E-22 112.8 11.4 116 12-130 31-158 (169)
60 KOG0514 Ankyrin repeat protein 99.8 5.8E-19 1.3E-23 125.8 6.0 125 33-165 264-399 (452)
61 TIGR00870 trp transient-recept 99.8 5.6E-18 1.2E-22 136.2 11.5 126 34-160 125-278 (743)
62 PHA02736 Viral ankyrin protein 99.8 3.9E-18 8.5E-23 112.4 7.4 97 33-130 51-152 (154)
63 KOG0514 Ankyrin repeat protein 99.7 5.3E-17 1.1E-21 115.9 10.8 136 14-160 280-428 (452)
64 PHA02792 ankyrin-like protein; 99.7 1.9E-16 4E-21 122.4 13.7 133 12-145 349-494 (631)
65 KOG0195 Integrin-linked kinase 99.7 6.6E-18 1.4E-22 117.6 4.5 111 45-162 8-123 (448)
66 KOG3676 Ca2+-permeable cation 99.7 7.6E-17 1.6E-21 125.0 9.5 125 31-161 178-330 (782)
67 COG0666 Arp FOG: Ankyrin repea 99.7 1.1E-15 2.4E-20 105.8 13.9 122 32-161 68-202 (235)
68 PF12796 Ank_2: Ankyrin repeat 99.7 2E-16 4.4E-21 94.7 8.8 76 75-161 1-81 (89)
69 TIGR00870 trp transient-recept 99.7 2.4E-16 5.2E-21 126.9 11.1 77 69-152 126-216 (743)
70 PTZ00322 6-phosphofructo-2-kin 99.7 5.8E-16 1.2E-20 122.8 12.5 106 39-152 84-196 (664)
71 KOG0505 Myosin phosphatase, re 99.7 1.5E-16 3.2E-21 118.3 8.1 131 12-152 83-272 (527)
72 KOG0507 CASK-interacting adapt 99.7 1.5E-16 3.2E-21 122.5 7.0 122 32-161 44-170 (854)
73 KOG0515 p53-interacting protei 99.6 7.2E-16 1.6E-20 114.8 8.6 106 39-151 552-657 (752)
74 PF13637 Ank_4: Ankyrin repeat 99.6 1.9E-15 4E-20 82.0 6.4 54 71-124 1-54 (54)
75 PF13857 Ank_5: Ankyrin repeat 99.6 5.1E-16 1.1E-20 84.7 3.0 50 62-111 7-56 (56)
76 KOG4214 Myotrophin and similar 99.6 4.1E-15 9E-20 86.6 6.5 95 12-111 13-107 (117)
77 PF13857 Ank_5: Ankyrin repeat 99.6 1.9E-15 4.1E-20 82.4 4.5 55 90-151 1-56 (56)
78 KOG0507 CASK-interacting adapt 99.6 9.8E-15 2.1E-19 112.7 8.2 145 14-161 61-211 (854)
79 COG0666 Arp FOG: Ankyrin repea 99.5 1.1E-13 2.5E-18 95.7 11.4 111 14-127 85-203 (235)
80 cd00204 ANK ankyrin repeats; 99.5 4.1E-13 8.9E-18 84.6 12.1 109 13-124 18-126 (126)
81 PF13637 Ank_4: Ankyrin repeat 99.5 3E-14 6.6E-19 77.2 5.6 54 37-91 1-54 (54)
82 KOG1710 MYND Zn-finger and ank 99.5 5.5E-13 1.2E-17 93.1 10.0 112 11-126 22-134 (396)
83 KOG1710 MYND Zn-finger and ank 99.5 3.8E-13 8.3E-18 93.8 8.3 106 39-152 14-120 (396)
84 PTZ00322 6-phosphofructo-2-kin 99.4 9.1E-13 2E-17 104.8 8.6 81 74-161 85-170 (664)
85 KOG3676 Ca2+-permeable cation 99.4 2.1E-12 4.4E-17 100.8 9.8 114 12-126 194-330 (782)
86 KOG4369 RTK signaling protein 99.4 1.5E-12 3.2E-17 104.8 7.3 142 11-160 766-913 (2131)
87 KOG0515 p53-interacting protei 99.3 3.6E-12 7.8E-17 95.4 7.6 93 31-124 577-672 (752)
88 KOG4369 RTK signaling protein 99.3 2.3E-12 5E-17 103.7 6.4 152 8-160 863-1048(2131)
89 KOG0506 Glutaminase (contains 99.2 3.5E-11 7.6E-16 89.1 6.1 92 35-127 504-596 (622)
90 KOG0818 GTPase-activating prot 99.2 4.6E-10 9.9E-15 83.7 11.6 87 39-126 135-222 (669)
91 KOG0783 Uncharacterized conser 99.2 2.4E-11 5.3E-16 95.3 3.5 95 17-113 33-128 (1267)
92 KOG0783 Uncharacterized conser 99.1 7.9E-11 1.7E-15 92.6 3.2 83 63-152 44-127 (1267)
93 PF13606 Ank_3: Ankyrin repeat 98.9 1.6E-09 3.4E-14 51.0 3.8 28 71-98 2-29 (30)
94 PF00023 Ank: Ankyrin repeat H 98.9 2.6E-09 5.5E-14 51.5 4.3 31 71-101 2-32 (33)
95 KOG0506 Glutaminase (contains 98.9 2.9E-09 6.3E-14 79.2 4.9 77 69-152 504-581 (622)
96 KOG0705 GTPase-activating prot 98.9 2.7E-08 5.8E-13 75.8 9.9 97 34-132 622-722 (749)
97 KOG0522 Ankyrin repeat protein 98.9 1E-08 2.3E-13 77.1 7.5 88 39-126 22-110 (560)
98 PF13606 Ank_3: Ankyrin repeat 98.9 4.1E-09 8.8E-14 49.5 3.5 28 103-130 1-28 (30)
99 PF00023 Ank: Ankyrin repeat H 98.8 1E-08 2.2E-13 49.4 3.9 28 103-130 1-28 (33)
100 KOG0782 Predicted diacylglycer 98.7 7.4E-08 1.6E-12 73.5 7.6 92 33-124 895-987 (1004)
101 KOG0511 Ankyrin repeat protein 98.7 1.7E-07 3.7E-12 68.3 9.1 74 33-109 34-107 (516)
102 KOG0818 GTPase-activating prot 98.7 7.8E-08 1.7E-12 72.1 7.2 71 74-151 136-207 (669)
103 KOG2384 Major histocompatibili 98.7 1.6E-07 3.5E-12 62.3 7.6 65 62-126 3-68 (223)
104 KOG0782 Predicted diacylglycer 98.7 8.4E-08 1.8E-12 73.3 7.1 113 41-161 870-989 (1004)
105 KOG0521 Putative GTPase activa 98.6 5.5E-08 1.2E-12 78.3 4.5 96 25-121 644-739 (785)
106 KOG0511 Ankyrin repeat protein 98.5 6.2E-07 1.3E-11 65.5 7.6 73 72-151 37-109 (516)
107 KOG0705 GTPase-activating prot 98.4 7.9E-07 1.7E-11 68.0 7.1 80 17-97 639-720 (749)
108 KOG0521 Putative GTPase activa 98.4 2.2E-07 4.8E-12 74.9 3.7 77 69-152 654-730 (785)
109 KOG0522 Ankyrin repeat protein 98.4 1.3E-06 2.9E-11 66.1 7.3 79 12-92 31-109 (560)
110 KOG2384 Major histocompatibili 98.3 4E-06 8.7E-11 55.8 6.5 70 28-98 3-73 (223)
111 KOG0520 Uncharacterized conser 98.2 2.3E-06 4.9E-11 69.5 5.9 100 31-130 568-667 (975)
112 KOG3609 Receptor-activated Ca2 98.2 4.6E-06 1E-10 66.5 7.0 116 41-163 29-155 (822)
113 KOG0520 Uncharacterized conser 98.1 2.2E-06 4.7E-11 69.6 2.8 114 10-126 582-702 (975)
114 KOG3609 Receptor-activated Ca2 98.1 2.3E-05 5.1E-10 62.6 8.2 112 12-131 36-158 (822)
115 KOG2505 Ankyrin repeat protein 97.6 0.00015 3.4E-09 55.0 4.9 65 15-80 404-472 (591)
116 KOG2505 Ankyrin repeat protein 97.3 0.00082 1.8E-08 51.2 6.2 69 84-159 404-480 (591)
117 smart00248 ANK ankyrin repeats 97.3 0.0008 1.7E-08 29.9 3.9 21 106-126 4-24 (30)
118 smart00248 ANK ankyrin repeats 97.2 0.00077 1.7E-08 30.0 3.6 27 70-96 1-27 (30)
119 PF06128 Shigella_OspC: Shigel 96.3 0.028 6E-07 39.1 6.9 95 34-130 176-280 (284)
120 PF11929 DUF3447: Domain of un 90.2 1.2 2.6E-05 25.4 4.8 47 39-93 8-54 (76)
121 PF06128 Shigella_OspC: Shigel 89.6 1 2.3E-05 31.6 4.8 57 40-96 218-279 (284)
122 PF11929 DUF3447: Domain of un 85.3 2.3 5.1E-05 24.2 4.0 48 72-126 7-54 (76)
123 KOG1709 Guanidinoacetate methy 79.4 2.3 4.9E-05 29.8 2.8 35 61-95 5-39 (271)
124 PF03158 DUF249: Multigene fam 79.0 5.7 0.00012 27.0 4.4 80 39-125 106-191 (192)
125 PF03158 DUF249: Multigene fam 74.8 8.7 0.00019 26.1 4.4 91 35-131 74-170 (192)
126 KOG3836 HLH transcription fact 45.2 6.9 0.00015 31.5 -0.1 45 85-129 410-454 (605)
127 KOG3836 HLH transcription fact 40.2 7.9 0.00017 31.2 -0.4 57 44-101 403-459 (605)
128 KOG4591 Uncharacterized conser 36.1 14 0.0003 25.6 0.3 47 102-151 220-267 (280)
129 COG1732 OpuBC Periplasmic glyc 35.1 48 0.001 24.6 2.9 35 51-85 50-85 (300)
130 KOG1595 CCCH-type Zn-finger pr 33.4 8.9 0.00019 30.4 -1.0 71 71-150 58-132 (528)
131 KOG1709 Guanidinoacetate methy 32.2 46 0.001 23.6 2.3 24 39-63 17-40 (271)
132 TIGR03853 matur_matur probable 31.7 87 0.0019 18.1 3.0 13 152-164 48-60 (77)
133 PF10678 DUF2492: Protein of u 28.5 1E+02 0.0023 17.8 3.0 13 152-164 50-62 (78)
134 KOG4335 FERM domain-containing 27.0 39 0.00086 26.9 1.4 72 84-161 157-228 (558)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.2e-30 Score=168.74 Aligned_cols=141 Identities=26% Similarity=0.351 Sum_probs=118.2
Q ss_pred hHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 030904 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (169)
Q Consensus 14 ~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~ 93 (169)
..+++.||+. ..++.++..+..||||||.||..|+.++++.|+.+.++++|..+..|.|+||||+..+..+++++|++.
T Consensus 50 ~~eiv~fLls-q~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ 128 (226)
T KOG4412|consen 50 HVEIVYFLLS-QPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEK 128 (226)
T ss_pred chhHHHHHHh-cCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhc
Confidence 4567788875 355555566888999999999999999999999877888998888999999999999999999999999
Q ss_pred CCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccch-h----hHHHHhhhcc
Q 030904 94 GASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQ-N----DLVSLFIMQQ 162 (169)
Q Consensus 94 g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A-~----~~~~~li~~~ 162 (169)
|+.++.+|..|+||||.|+.-|...++++|+..|+.. |.+|+.|+||||.| + +..-+|+.+|
T Consensus 129 ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~-------n~qDk~G~TpL~~al~e~~~d~a~lLV~~g 195 (226)
T KOG4412|consen 129 GALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPL-------NTQDKYGFTPLHHALAEGHPDVAVLLVRAG 195 (226)
T ss_pred CCCCcccccccCchhHHHHhccchhhHHHHHhcCCCC-------CcccccCccHHHHHHhccCchHHHHHHHhc
Confidence 9999999999999999999999999999999888776 78899999999988 2 6666666654
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.2e-30 Score=168.69 Aligned_cols=120 Identities=28% Similarity=0.337 Sum_probs=114.3
Q ss_pred chhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCCCccCCCCCChHHHHHhc
Q 030904 36 PHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER-GASLEAKDEDGAIPLHDACAG 114 (169)
Q Consensus 36 ~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~-g~~~~~~~~~~~t~l~~a~~~ 114 (169)
.+.|||||||..|+.+++.+|+...+..+|.+|..||||||+|+..|..++|+.|+.+ |++++..++.|+||||+|+..
T Consensus 37 D~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK 116 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGK 116 (226)
T ss_pred cCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcC
Confidence 7889999999999999999999776899999999999999999999999999999999 999999999999999999999
Q ss_pred ChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhcc
Q 030904 115 GFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQQ 162 (169)
Q Consensus 115 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~~ 162 (169)
|..++.++|++.|+.+ +.+|..|.||||.|+ +++++||..+
T Consensus 117 ~r~eIaqlLle~ga~i-------~~kD~~~qtplHRAAavGklkvie~Li~~~ 162 (226)
T KOG4412|consen 117 GRLEIAQLLLEKGALI-------RIKDKQGQTPLHRAAAVGKLKVIEYLISQG 162 (226)
T ss_pred ChhhHHHHHHhcCCCC-------cccccccCchhHHHHhccchhhHHHHHhcC
Confidence 9999999999999987 899999999999985 9999999954
No 3
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.94 E-value=2.4e-26 Score=172.69 Aligned_cols=131 Identities=24% Similarity=0.292 Sum_probs=98.1
Q ss_pred CChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccC-CCCCcHHHHHHhcCCHHHHHHH
Q 030904 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPV-EDGDTALHLTCLYGYLPCVQLL 90 (169)
Q Consensus 12 ~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~~g~~~L~~a~~~~~~~~~~~l 90 (169)
++-+.+.+++...|..++-. +..|.++|||||.+++.+++++|+++ |+++|... ..+.||||||+++|+..++++|
T Consensus 55 G~l~~v~~lve~~g~~v~~~--D~~g~tlLHWAAiNNrl~v~r~li~~-gadvn~~gG~l~stPLHWAar~G~~~vv~lL 131 (600)
T KOG0509|consen 55 GELETVKELVESEGESVNNP--DREGVTLLHWAAINNRLDVARYLISH-GADVNAIGGVLGSTPLHWAARNGHISVVDLL 131 (600)
T ss_pred chHHHHHHHHhhcCcCCCCC--CcCCccceeHHHHcCcHHHHHHHHHc-CCCccccCCCCCCCcchHHHHcCcHHHHHHH
Confidence 33444555444446666543 33777778888888888888888877 77888776 5577888888888888888888
Q ss_pred HHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh
Q 030904 91 LERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN 152 (169)
Q Consensus 91 l~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~ 152 (169)
+++||+++.+|..|.+|+|.|++.|+..++-+++.++.++ +.+|.+|+|||++|+
T Consensus 132 lqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~-------d~~D~~grTpLmwAa 186 (600)
T KOG0509|consen 132 LQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADI-------DLRDNNGRTPLMWAA 186 (600)
T ss_pred HHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccC-------CCcCCCCCCHHHHHH
Confidence 8888888888888888888888888888888888888776 677777777777774
No 4
>PHA02791 ankyrin-like protein; Provisional
Probab=99.93 E-value=7e-25 Score=156.67 Aligned_cols=135 Identities=13% Similarity=0.059 Sum_probs=78.4
Q ss_pred HHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCC-cHHHHHHhcCCHHHHHHHHHc
Q 030904 15 EEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGD-TALHLTCLYGYLPCVQLLLER 93 (169)
Q Consensus 15 ~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~-~~L~~a~~~~~~~~~~~ll~~ 93 (169)
.+++++|++.|++++.. +..|.||||+|+..|+.+++++|++. +++++.++..|+ ||||+|+..++.+++++|++.
T Consensus 74 ~eiV~lLL~~Gadvn~~--d~~G~TpLh~Aa~~g~~eivk~Ll~~-gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~ 150 (284)
T PHA02791 74 TKIVKILLFSGMDDSQF--DDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE 150 (284)
T ss_pred HHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhc
Confidence 44555555555555432 33455666666666666666666555 555555555543 556666666666666666655
Q ss_pred CCCCCccC-CCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCc-ccchh-----hHHHHhhhc
Q 030904 94 GASLEAKD-EDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTD-CDDQN-----DLVSLFIMQ 161 (169)
Q Consensus 94 g~~~~~~~-~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tp-l~~A~-----~~~~~li~~ 161 (169)
+.+. .+ ..|.||||+|++.|+.+++++|+++|+++ +.++..|.|| ||+|+ +++++||+.
T Consensus 151 ~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~-------n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~ 216 (284)
T PHA02791 151 IPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTST-------NTNNSLLFIPDIKLAIDNKDLEMLQALFKY 216 (284)
T ss_pred CCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCC-------CcccCCCCChHHHHHHHcCCHHHHHHHHHC
Confidence 4322 11 13566666666666666666666666665 5666666665 77764 777777763
No 5
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.93 E-value=1.9e-25 Score=167.96 Aligned_cols=140 Identities=22% Similarity=0.284 Sum_probs=126.2
Q ss_pred HHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 030904 15 EEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERG 94 (169)
Q Consensus 15 ~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g 94 (169)
-.+.++++++|+++|.-.- ..+.||||||+++|+..++..|+++ |++++.+|..|.+|+|.|+.+++...+.|++..|
T Consensus 91 l~v~r~li~~gadvn~~gG-~l~stPLHWAar~G~~~vv~lLlqh-GAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~ 168 (600)
T KOG0509|consen 91 LDVARYLISHGADVNAIGG-VLGSTPLHWAARNGHISVVDLLLQH-GADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKG 168 (600)
T ss_pred HHHHHHHHHcCCCccccCC-CCCCCcchHHHHcCcHHHHHHHHHc-CCCCceecCCCCcHHHHHHHhCchHHHHHHHHhc
Confidence 3588999999999996543 5778999999999999999999998 9999999999999999999999999999999999
Q ss_pred CCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhccc-CCCCCcccchh-----hHHHHhhhcccc
Q 030904 95 ASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVD-AEGDTDCDDQN-----DLVSLFIMQQEV 164 (169)
Q Consensus 95 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~-~~g~tpl~~A~-----~~~~~li~~~~~ 164 (169)
++++.+|.+|+|||++|+.+|+...++.|+..|+.+ +.+| ..|.||||+|+ ..+. ||.+++.
T Consensus 169 ~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~-------~~~d~~~g~TpLHwa~~~gN~~~v~-Ll~~g~~ 236 (600)
T KOG0509|consen 169 ADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASL-------LLTDDNHGNTPLHWAVVGGNLTAVK-LLLEGGA 236 (600)
T ss_pred ccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccc-------cccccccCCchHHHHHhcCCcceEe-hhhhcCC
Confidence 999999999999999999999998899999999998 5555 99999999995 7777 5555543
No 6
>PHA02791 ankyrin-like protein; Provisional
Probab=99.93 E-value=9.4e-25 Score=156.03 Aligned_cols=133 Identities=19% Similarity=0.122 Sum_probs=67.2
Q ss_pred HHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 030904 15 EEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERG 94 (169)
Q Consensus 15 ~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g 94 (169)
..+++++++.|++++.. .+.||||+|+..|+.++++.|+.. |++++.++..|.||||+|+..++.+++++|++.|
T Consensus 43 ~eiv~~Ll~~ga~~n~~----d~~TpLh~Aa~~g~~eiV~lLL~~-Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~g 117 (284)
T PHA02791 43 VRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFS-GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN 117 (284)
T ss_pred HHHHHHHHHCcCCCcCC----CCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 33444455544444321 123555555555555555555544 4555555555555555555555555555555555
Q ss_pred CCCCccCCCCC-ChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhccc-CCCCCcccchh-----hHHHHhhhc
Q 030904 95 ASLEAKDEDGA-IPLHDACAGGFIEIVQLLINSASGTECVKRMLETVD-AEGDTDCDDQN-----DLVSLFIMQ 161 (169)
Q Consensus 95 ~~~~~~~~~~~-t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~-~~g~tpl~~A~-----~~~~~li~~ 161 (169)
++++.++..|+ ||||+|+..|+.+++++|++.+... .+ ..|.||||+|+ +++++|++.
T Consensus 118 adin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~---------~d~~~g~TpLh~Aa~~g~~eiv~lLL~~ 182 (284)
T PHA02791 118 WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST---------FDLAILLSCIHITIKNGHVDMMILLLDY 182 (284)
T ss_pred CCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc---------cccccCccHHHHHHHcCCHHHHHHHHHC
Confidence 55554444442 4555555555555555555543322 12 23567777664 666666663
No 7
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.93 E-value=1.2e-24 Score=166.87 Aligned_cols=141 Identities=23% Similarity=0.286 Sum_probs=124.6
Q ss_pred HHHHHHHHhcCCCCcccCCCcc-hhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 030904 15 EEDNALFEEDGVNMDLESETPP-HLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (169)
Q Consensus 15 ~~~~~~l~~~g~~~~~~~~~~~-~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~ 93 (169)
.++++++++.|++++.. +.. |.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++.
T Consensus 147 ~~iv~~Ll~~gadin~~--~~~~g~tpLh~A~~~~~~~iv~~Ll~~-gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ 223 (477)
T PHA02878 147 AEITKLLLSYGADINMK--DRHKGNTALHYATENKDQRLTELLLSY-GANVNIPDKTNNSPLHHAVKHYNKPIVHILLEN 223 (477)
T ss_pred HHHHHHHHHcCCCCCcc--CCCCCCCHHHHHHhCCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 34889999999998754 345 88999999999999999999998 999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCChHHHHHhc-ChHHHHHHHHhcCCCchhhhhhhhcccC-CCCCcccchh---hHHHHhhhc-cccc
Q 030904 94 GASLEAKDEDGAIPLHDACAG-GFIEIVQLLINSASGTECVKRMLETVDA-EGDTDCDDQN---DLVSLFIMQ-QEVN 165 (169)
Q Consensus 94 g~~~~~~~~~~~t~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~~~~~~~~-~g~tpl~~A~---~~~~~li~~-~~~~ 165 (169)
|++++.+|..|.||||+|+.. ++.+++++|+++|+++ +.++. .|.||||+|. +++++|++. .++|
T Consensus 224 ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadv-------n~~~~~~g~TpLh~A~~~~~~v~~Ll~~gadin 294 (477)
T PHA02878 224 GASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDV-------NAKSYILGLTALHSSIKSERKLKLLLEYGADIN 294 (477)
T ss_pred CCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCC-------CccCCCCCCCHHHHHccCHHHHHHHHHCCCCCC
Confidence 999999999999999999975 6899999999999998 56654 7899999984 788888884 3444
No 8
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.92 E-value=6.9e-24 Score=160.01 Aligned_cols=117 Identities=27% Similarity=0.380 Sum_probs=68.8
Q ss_pred chhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcC
Q 030904 36 PHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGG 115 (169)
Q Consensus 36 ~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~ 115 (169)
.|.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..|
T Consensus 101 ~g~tpL~~A~~~~~~~iv~~Ll~~-gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g 179 (413)
T PHA02875 101 DGMTPLHLATILKKLDIMKLLIAR-GADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKG 179 (413)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC
Confidence 345566666666666666666655 5566555556666666666666666666666666666666666666666666666
Q ss_pred hHHHHHHHHhcCCCchhhhhhhhcccCCC-CCcccchh-----hHHHHhhh
Q 030904 116 FIEIVQLLINSASGTECVKRMLETVDAEG-DTDCDDQN-----DLVSLFIM 160 (169)
Q Consensus 116 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~g-~tpl~~A~-----~~~~~li~ 160 (169)
+.+++++|++.|+++ +..+..| .||+|+|+ +++++|++
T Consensus 180 ~~eiv~~Ll~~ga~~-------n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~ 223 (413)
T PHA02875 180 DIAICKMLLDSGANI-------DYFGKNGCVAALCYAIENNKIDIVRLFIK 223 (413)
T ss_pred CHHHHHHHHhCCCCC-------CcCCCCCCchHHHHHHHcCCHHHHHHHHH
Confidence 666666666666655 3444444 34555553 56666665
No 9
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.92 E-value=7.4e-24 Score=159.83 Aligned_cols=137 Identities=28% Similarity=0.308 Sum_probs=101.0
Q ss_pred HHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCC-cccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 030904 16 EDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSI-DEPVEDGDTALHLTCLYGYLPCVQLLLERG 94 (169)
Q Consensus 16 ~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~-~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g 94 (169)
+++++|++.|++++.. ...+.+|||.|+..|+.+.+++|++. +... +..+..|.||||+|+..++.+++++|++.|
T Consensus 49 ~~v~~Ll~~ga~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g 125 (413)
T PHA02875 49 EAIKLLMKHGAIPDVK--YPDIESELHDAVEEGDVKAVEELLDL-GKFADDVFYKDGMTPLHLATILKKLDIMKLLIARG 125 (413)
T ss_pred HHHHHHHhCCCCcccc--CCCcccHHHHHHHCCCHHHHHHHHHc-CCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 3455555555544432 22334555555555555555555554 3322 233556889999999999999999999999
Q ss_pred CCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhcc
Q 030904 95 ASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQQ 162 (169)
Q Consensus 95 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~~ 162 (169)
++++.++..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+ +++++|++.|
T Consensus 126 ad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~-------~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~g 191 (413)
T PHA02875 126 ADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACL-------DIEDCCGCTPLIIAMAKGDIAICKMLLDSG 191 (413)
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC-------CCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 999988888999999999999999999999998887 788999999999995 8899999843
No 10
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.92 E-value=6.6e-24 Score=162.70 Aligned_cols=142 Identities=23% Similarity=0.255 Sum_probs=123.1
Q ss_pred CCChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHH---------------------------------------
Q 030904 11 EDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVH--------------------------------------- 51 (169)
Q Consensus 11 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~--------------------------------------- 51 (169)
..+..+++++|++.|++++.. +..|.||||+||..|+.+
T Consensus 46 ~~g~~e~vk~Ll~~gadvn~~--d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei~~~Ll~~ 123 (477)
T PHA02878 46 EARNLDVVKSLLTRGHNVNQP--DHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEIFKIILTN 123 (477)
T ss_pred HcCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHHHHHHHHhC
Confidence 455677889999999988754 567889999999876543
Q ss_pred -------------------------HHHHHHHhCCCCCcccCCC-CCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCC
Q 030904 52 -------------------------SLRLALDNLSGSIDEPVED-GDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGA 105 (169)
Q Consensus 52 -------------------------~~~~ll~~~~~~~~~~~~~-g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~ 105 (169)
+++.|++. |++++.++.. |.||||+|+..++.+++++|++.|++++..|..|.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~-gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~ 202 (477)
T PHA02878 124 RYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSY-GADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNN 202 (477)
T ss_pred cccCcccCcHHHHhhccchhhHHHHHHHHHHHc-CCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 44555555 7788888888 99999999999999999999999999999999999
Q ss_pred ChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh------hHHHHhhhcc
Q 030904 106 IPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN------DLVSLFIMQQ 162 (169)
Q Consensus 106 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~------~~~~~li~~~ 162 (169)
||||.|++.++.+++++|++.|+++ +.+|..|.||||+|+ +++++|++.|
T Consensus 203 tpLh~A~~~~~~~iv~~Ll~~ga~i-------n~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~g 258 (477)
T PHA02878 203 SPLHHAVKHYNKPIVHILLENGAST-------DARDKCGNTPLHISVGYCKDYDILKLLLEHG 258 (477)
T ss_pred CHHHHHHHhCCHHHHHHHHHcCCCC-------CCCCCCCCCHHHHHHHhcCCHHHHHHHHHcC
Confidence 9999999999999999999999998 789999999999984 7889999854
No 11
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.92 E-value=1.4e-24 Score=158.63 Aligned_cols=138 Identities=26% Similarity=0.373 Sum_probs=127.0
Q ss_pred CChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHH
Q 030904 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLL 91 (169)
Q Consensus 12 ~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll 91 (169)
-+--++++++++.|+++|...+ .+.|||..||.-|+++++++|+++ +++++..+..|.|.||+||..|+.+++++|+
T Consensus 94 AGHl~vVk~L~~~ga~VN~tT~--TNStPLraACfDG~leivKyLvE~-gad~~IanrhGhTcLmIa~ykGh~~I~qyLl 170 (615)
T KOG0508|consen 94 AGHLEVVKLLLRRGASVNDTTR--TNSTPLRAACFDGHLEIVKYLVEH-GADPEIANRHGHTCLMIACYKGHVDIAQYLL 170 (615)
T ss_pred cCcHHHHHHHHHhcCccccccc--cCCccHHHHHhcchhHHHHHHHHc-CCCCcccccCCCeeEEeeeccCchHHHHHHH
Confidence 4456799999999988875433 455999999999999999999988 9999999999999999999999999999999
Q ss_pred HcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhh
Q 030904 92 ERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIM 160 (169)
Q Consensus 92 ~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~ 160 (169)
+.|++++.++..|+|+||.++..|+.+++++|+.+|+.. .+|..|.|||-.|+ +++++|++
T Consensus 171 e~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i--------~~d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 171 EQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKI--------DVDGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred HhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCcee--------eecCCCCchHHHHhhhcchHHHHHHhc
Confidence 999999999999999999999999999999999999987 56788999999995 99999985
No 12
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.91 E-value=1.4e-23 Score=159.20 Aligned_cols=144 Identities=20% Similarity=0.385 Sum_probs=117.4
Q ss_pred HHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 030904 15 EEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERG 94 (169)
Q Consensus 15 ~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g 94 (169)
.+.++.+++.|++++. .+..|.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++.|
T Consensus 104 ~~~i~~ll~~g~d~n~--~~~~g~T~Lh~A~~~~~~~~v~~Ll~~-gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g 180 (434)
T PHA02874 104 KDMIKTILDCGIDVNI--KDAELKTFLHYAIKKGDLESIKMLFEY-GADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG 180 (434)
T ss_pred HHHHHHHHHCcCCCCC--CCCCCccHHHHHHHCCCHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC
Confidence 3455566666666654 456788999999999999999999998 9999999999999999999999999999999999
Q ss_pred CCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchh-------------------hhh-----hhhcccCCCCCcccc
Q 030904 95 ASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTEC-------------------VKR-----MLETVDAEGDTDCDD 150 (169)
Q Consensus 95 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~-------------------~~~-----~~~~~~~~g~tpl~~ 150 (169)
++++..+..|.||||+|+..|+.+++++|++.|+++.. +.. -++.+|..|.||||+
T Consensus 181 ~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~ 260 (434)
T PHA02874 181 AYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHH 260 (434)
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 99999999999999999999999999999999977520 000 124566677777777
Q ss_pred hh------hHHHHhhhc
Q 030904 151 QN------DLVSLFIMQ 161 (169)
Q Consensus 151 A~------~~~~~li~~ 161 (169)
|+ +++++|+..
T Consensus 261 A~~~~~~~~iv~~Ll~~ 277 (434)
T PHA02874 261 AINPPCDIDIIDILLYH 277 (434)
T ss_pred HHhcCCcHHHHHHHHHC
Confidence 64 566777763
No 13
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.91 E-value=9.9e-24 Score=161.86 Aligned_cols=139 Identities=24% Similarity=0.357 Sum_probs=99.3
Q ss_pred hHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCC------CcHHHHHHhcCC--HH
Q 030904 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDG------DTALHLTCLYGY--LP 85 (169)
Q Consensus 14 ~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g------~~~L~~a~~~~~--~~ 85 (169)
..++++++++.|++++... ..|.||||+|+..|+.+++++|++. |++++..+..| .+|||+|+..++ .+
T Consensus 155 ~~~iv~~Ll~~g~din~~d--~~g~tpL~~A~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 231 (480)
T PHA03100 155 DLKILKLLIDKGVDINAKN--RYGYTPLHIAVEKGNIDVIKFLLDN-GADINAGDIETLLFTIFETPLHIAACYNEITLE 231 (480)
T ss_pred hHHHHHHHHHCCCCccccc--CCCCCHHHHHHHhCCHHHHHHHHHc-CCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHH
Confidence 4556666666666665432 3566777777777777777777766 66666666666 677777777776 77
Q ss_pred HHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhh
Q 030904 86 CVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIM 160 (169)
Q Consensus 86 ~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~ 160 (169)
++++|++.|++++.+|..|.||||+|+..|+.+++++|++.|+++ +.++..|.||++.|+ +++++|++
T Consensus 232 iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~-------n~~d~~g~tpl~~A~~~~~~~iv~~Ll~ 304 (480)
T PHA03100 232 VVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANP-------NLVNKYGDTPLHIAILNNNKEIFKLLLN 304 (480)
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-------CccCCCCCcHHHHHHHhCCHHHHHHHHh
Confidence 777777777777777777778888887777777777777777776 677777888888774 77777777
Q ss_pred cc
Q 030904 161 QQ 162 (169)
Q Consensus 161 ~~ 162 (169)
.|
T Consensus 305 ~g 306 (480)
T PHA03100 305 NG 306 (480)
T ss_pred cC
Confidence 54
No 14
>PHA03095 ankyrin-like protein; Provisional
Probab=99.91 E-value=1.6e-23 Score=160.40 Aligned_cols=143 Identities=22% Similarity=0.277 Sum_probs=127.3
Q ss_pred CCCChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcC---CHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcC-CHH
Q 030904 10 EEDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLG---DVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYG-YLP 85 (169)
Q Consensus 10 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g---~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~-~~~ 85 (169)
.++.+.++++.+++.|++++.. +..|.||||+|+..+ +.++++.|++. |++++.++..|.||||+|+..+ ..+
T Consensus 22 ~~~~~~~~v~~Ll~~ga~vn~~--~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~-Gadin~~~~~g~TpLh~A~~~~~~~~ 98 (471)
T PHA03095 22 ASNVTVEEVRRLLAAGADVNFR--GEYGKTPLHLYLHYSSEKVKDIVRLLLEA-GADVNAPERCGFTPLHLYLYNATTLD 98 (471)
T ss_pred CCCCCHHHHHHHHHcCCCcccC--CCCCCCHHHHHHHhcCCChHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCcHH
Confidence 3455677888999999998754 557889999999998 99999999998 9999999999999999999999 599
Q ss_pred HHHHHHHcCCCCCccCCCCCChHHHHH--hcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-------hHHH
Q 030904 86 CVQLLLERGASLEAKDEDGAIPLHDAC--AGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-------DLVS 156 (169)
Q Consensus 86 ~~~~ll~~g~~~~~~~~~~~t~l~~a~--~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-------~~~~ 156 (169)
++++|+++|++++.++..|.||||+|+ ..++.+++++|+++|+++ +.+|..|.||||+|. ++++
T Consensus 99 iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~-------~~~d~~g~tpL~~a~~~~~~~~~iv~ 171 (471)
T PHA03095 99 VIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADV-------NALDLYGMTPLAVLLKSRNANVELLR 171 (471)
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCC-------CccCCCCCCHHHHHHHcCCCCHHHHH
Confidence 999999999999999999999999999 566889999999999998 788999999999873 7888
Q ss_pred Hhhhcc
Q 030904 157 LFIMQQ 162 (169)
Q Consensus 157 ~li~~~ 162 (169)
+|++.|
T Consensus 172 ~Ll~~g 177 (471)
T PHA03095 172 LLIDAG 177 (471)
T ss_pred HHHHcC
Confidence 988864
No 15
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.91 E-value=2.5e-23 Score=143.45 Aligned_cols=137 Identities=17% Similarity=0.199 Sum_probs=92.5
Q ss_pred ChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcC--CHHHHHHHHHhCCCCCcccC-CCCCcHHHHHHhc---CCHHH
Q 030904 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLG--DVHSLRLALDNLSGSIDEPV-EDGDTALHLTCLY---GYLPC 86 (169)
Q Consensus 13 ~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g--~~~~~~~ll~~~~~~~~~~~-~~g~~~L~~a~~~---~~~~~ 86 (169)
+....++.+++.. + ..+..|.||||+|+..+ +.+++++|++. |++++.++ ..|.||||+|+.. ++.++
T Consensus 32 ~~~~~vk~Li~~~---n--~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~-gadvn~~~~~~g~TpLh~a~~~~~~~~~ei 105 (209)
T PHA02859 32 DDIEGVKKWIKFV---N--DCNDLYETPIFSCLEKDKVNVEILKFLIEN-GADVNFKTRDNNLSALHHYLSFNKNVEPEI 105 (209)
T ss_pred CcHHHHHHHHHhh---h--ccCccCCCHHHHHHHcCCCCHHHHHHHHHC-CCCCCccCCCCCCCHHHHHHHhCccccHHH
Confidence 3344555555431 1 23445667777777643 67777777777 77777775 4677777776543 35677
Q ss_pred HHHHHHcCCCCCccCCCCCChHHHHHh--cChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccc-h-----hhHHHHh
Q 030904 87 VQLLLERGASLEAKDEDGAIPLHDACA--GGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDD-Q-----NDLVSLF 158 (169)
Q Consensus 87 ~~~ll~~g~~~~~~~~~~~t~l~~a~~--~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~-A-----~~~~~~l 158 (169)
+++|+++|++++.+|..|.||||+|+. .++.+++++|+++|+++ +.+|..|.||||. | .+++++|
T Consensus 106 v~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadi-------n~~d~~g~t~Lh~~a~~~~~~~iv~~L 178 (209)
T PHA02859 106 LKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSF-------LNKDFDNNNILYSYILFHSDKKIFDFL 178 (209)
T ss_pred HHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc-------ccccCCCCcHHHHHHHhcCCHHHHHHH
Confidence 777777777777777777788777765 35677777777777776 6777777788774 3 2677777
Q ss_pred hhcc
Q 030904 159 IMQQ 162 (169)
Q Consensus 159 i~~~ 162 (169)
++.|
T Consensus 179 l~~G 182 (209)
T PHA02859 179 TSLG 182 (209)
T ss_pred HHcC
Confidence 7643
No 16
>PHA02946 ankyin-like protein; Provisional
Probab=99.91 E-value=2.6e-23 Score=157.68 Aligned_cols=115 Identities=16% Similarity=0.162 Sum_probs=92.7
Q ss_pred CChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcC--CHHHHHH
Q 030904 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYG--YLPCVQL 89 (169)
Q Consensus 12 ~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~--~~~~~~~ 89 (169)
+....+++++++.|++++.. +..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..+ ..+++++
T Consensus 49 ~~~~~iv~~Ll~~Gadvn~~--d~~G~TpLh~Aa~~g~~eiv~lLL~~-GAdin~~d~~g~TpLh~A~~~~~~~~e~v~l 125 (446)
T PHA02946 49 GLDERFVEELLHRGYSPNET--DDDGNYPLHIASKINNNRIVAMLLTH-GADPNACDKQHKTPLYYLSGTDDEVIERINL 125 (446)
T ss_pred CCCHHHHHHHHHCcCCCCcc--CCCCCCHHHHHHHcCCHHHHHHHHHC-cCCCCCCCCCCCCHHHHHHHcCCchHHHHHH
Confidence 34567899999999998754 56788999999999999999999998 9999999999999999988765 4678888
Q ss_pred HHHcCCCCCc-cCCCCCChHHHHHhcChHHHHHHHHhcCCCc
Q 030904 90 LLERGASLEA-KDEDGAIPLHDACAGGFIEIVQLLINSASGT 130 (169)
Q Consensus 90 ll~~g~~~~~-~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~ 130 (169)
|+++|++++. .+..|.|||| |+..++.+++++|++.|+++
T Consensus 126 Ll~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~ 166 (446)
T PHA02946 126 LVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEA 166 (446)
T ss_pred HHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccc
Confidence 9988888874 5667777776 44456666666666666554
No 17
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.91 E-value=3.2e-23 Score=157.32 Aligned_cols=142 Identities=22% Similarity=0.371 Sum_probs=113.1
Q ss_pred CChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHh----------------------CCCCCcccCC
Q 030904 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDN----------------------LSGSIDEPVE 69 (169)
Q Consensus 12 ~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~----------------------~~~~~~~~~~ 69 (169)
.+..+++++|++.|++++.. +..+.+|||.|+..|+.+++++|++. .|++++.++.
T Consensus 45 ~g~~~iv~~Ll~~Ga~~n~~--~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~ 122 (434)
T PHA02874 45 SGDAKIVELFIKHGADINHI--NTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDA 122 (434)
T ss_pred cCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCC
Confidence 45556777888888877643 44567888888888888888888765 1344566777
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCccc
Q 030904 70 DGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCD 149 (169)
Q Consensus 70 ~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~ 149 (169)
.|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|+++ +.++..|.||||
T Consensus 123 ~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~-------n~~~~~g~tpL~ 195 (434)
T PHA02874 123 ELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYA-------NVKDNNGESPLH 195 (434)
T ss_pred CCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-------CCCCCCCCCHHH
Confidence 8888888888888888888888888888888888888888888888888888888888887 677888888888
Q ss_pred chh-----hHHHHhhhcc
Q 030904 150 DQN-----DLVSLFIMQQ 162 (169)
Q Consensus 150 ~A~-----~~~~~li~~~ 162 (169)
+|+ +++++|++.+
T Consensus 196 ~A~~~g~~~iv~~Ll~~g 213 (434)
T PHA02874 196 NAAEYGDYACIKLLIDHG 213 (434)
T ss_pred HHHHcCCHHHHHHHHhCC
Confidence 885 8888888754
No 18
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.91 E-value=2.1e-23 Score=164.20 Aligned_cols=127 Identities=19% Similarity=0.218 Sum_probs=80.3
Q ss_pred HHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCC--HHHHHHHHHhCCCCCcccCCCCCcHHHHH--------------
Q 030904 15 EEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGD--VHSLRLALDNLSGSIDEPVEDGDTALHLT-------------- 78 (169)
Q Consensus 15 ~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~--~~~~~~ll~~~~~~~~~~~~~g~~~L~~a-------------- 78 (169)
.+++++|++.|++++.. +..|.||||+|+..|+ .+++++|++. |++++.++..|+||||+|
T Consensus 192 ~eIVklLLe~GADVN~k--D~~G~TPLH~Aa~~g~~~~eIVklLLe~-GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvki 268 (764)
T PHA02716 192 IDILEWLCNNGVNVNLQ--NNHLITPLHTYLITGNVCASVIKKIIEL-GGDMDMKCVNGMSPIMTYIINIDNINPEITNI 268 (764)
T ss_pred HHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhhhccCHHHHHH
Confidence 35666666666666543 3456667777776664 3666666666 666666666677776653
Q ss_pred -----------------------HhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHh--cChHHHHHHHHhcCCCchhh
Q 030904 79 -----------------------CLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACA--GGFIEIVQLLINSASGTECV 133 (169)
Q Consensus 79 -----------------------~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~--~~~~~~~~~ll~~~~~~~~~ 133 (169)
+..++.+++++|++.|++++.+|..|+||||+|+. .++.+++++|++.|+++
T Consensus 269 Lie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADI--- 345 (764)
T PHA02716 269 YIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDL--- 345 (764)
T ss_pred HHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCC---
Confidence 22345566666666677666666667777776543 34566677777776665
Q ss_pred hhhhhcccCCCCCcccch
Q 030904 134 KRMLETVDAEGDTDCDDQ 151 (169)
Q Consensus 134 ~~~~~~~~~~g~tpl~~A 151 (169)
+.+|..|+||||+|
T Consensus 346 ----N~kD~~G~TPLH~A 359 (764)
T PHA02716 346 ----NEPDNIGNTVLHTY 359 (764)
T ss_pred ----ccCCCCCCCHHHHH
Confidence 56667777777754
No 19
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.91 E-value=4.9e-23 Score=141.97 Aligned_cols=131 Identities=21% Similarity=0.232 Sum_probs=115.7
Q ss_pred ChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHc---CCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHh--cCCHHHH
Q 030904 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQL---GDVHSLRLALDNLSGSIDEPVEDGDTALHLTCL--YGYLPCV 87 (169)
Q Consensus 13 ~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~--~~~~~~~ 87 (169)
...++++++++.|++++... ...|.||||+|+.. ++.+++++|++. |++++.++..|.||||+|+. .++.+++
T Consensus 64 ~~~eiv~~Ll~~gadvn~~~-~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~-gadin~~d~~G~TpLh~a~~~~~~~~~iv 141 (209)
T PHA02859 64 VNVEILKFLIENGADVNFKT-RDNNLSALHHYLSFNKNVEPEILKILIDS-GSSITEEDEDGKNLLHMYMCNFNVRINVI 141 (209)
T ss_pred CCHHHHHHHHHCCCCCCccC-CCCCCCHHHHHHHhCccccHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhccCCHHHH
Confidence 36789999999999997532 34678999998764 479999999988 99999999999999999876 4689999
Q ss_pred HHHHHcCCCCCccCCCCCChHHH-HHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh
Q 030904 88 QLLLERGASLEAKDEDGAIPLHD-ACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN 152 (169)
Q Consensus 88 ~~ll~~g~~~~~~~~~~~t~l~~-a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~ 152 (169)
++|++.|++++.+|..|.||||. ++..++.+++++|++.|+++ +.+|..|.||+++|.
T Consensus 142 ~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi-------~~~d~~g~tpl~la~ 200 (209)
T PHA02859 142 KLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDI-------NETNKSGYNCYDLIK 200 (209)
T ss_pred HHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCC-------CCCCCCCCCHHHHHh
Confidence 99999999999999999999995 56788999999999999998 799999999999985
No 20
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.90 E-value=5.1e-23 Score=162.11 Aligned_cols=143 Identities=17% Similarity=0.143 Sum_probs=122.6
Q ss_pred CCChHHHHHHHHhcC-CCCcccCCCcchhHHHHHHHH--cCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCC--HH
Q 030904 11 EDDSEEDNALFEEDG-VNMDLESETPPHLRDLAAAAQ--LGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGY--LP 85 (169)
Q Consensus 11 ~~~~~~~~~~l~~~g-~~~~~~~~~~~~~t~l~~a~~--~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~--~~ 85 (169)
.+...+++++|++.| ++++.. .+..|.||||+|+. .++.+++++|++. |++++.++..|.||||+|+..++ .+
T Consensus 151 ~~v~leiVk~LLe~G~ADIN~~-~d~~G~TpLH~A~~n~~~~~eIVklLLe~-GADVN~kD~~G~TPLH~Aa~~g~~~~e 228 (764)
T PHA02716 151 RGIDLDLIKYMVDVGIVNLNYV-CKKTGYGILHAYLGNMYVDIDILEWLCNN-GVNVNLQNNHLITPLHTYLITGNVCAS 228 (764)
T ss_pred cCCCHHHHHHHHHCCCCCcccc-cCCCCCcHHHHHHHhccCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCCCHH
Confidence 356778999999999 887653 14578899998764 3678999999998 99999999999999999999985 48
Q ss_pred HHHHHHHcCCCCCccCCCCCChHHHH-------------------------------------HhcChHHHHHHHHhcCC
Q 030904 86 CVQLLLERGASLEAKDEDGAIPLHDA-------------------------------------CAGGFIEIVQLLINSAS 128 (169)
Q Consensus 86 ~~~~ll~~g~~~~~~~~~~~t~l~~a-------------------------------------~~~~~~~~~~~ll~~~~ 128 (169)
++++|++.|++++.++..|.||||.| ++.|+.+++++|++.|+
T Consensus 229 IVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GA 308 (764)
T PHA02716 229 VIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGV 308 (764)
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCC
Confidence 99999999999999999999999975 34567788899999998
Q ss_pred CchhhhhhhhcccCCCCCcccchh-------hHHHHhhhcc
Q 030904 129 GTECVKRMLETVDAEGDTDCDDQN-------DLVSLFIMQQ 162 (169)
Q Consensus 129 ~~~~~~~~~~~~~~~g~tpl~~A~-------~~~~~li~~~ 162 (169)
++ +.+|..|+||||+|+ +++++|++.|
T Consensus 309 dI-------N~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~G 342 (764)
T PHA02716 309 KL-------HYKDSAGRTCLHQYILRHNISTDIIKLLHEYG 342 (764)
T ss_pred ce-------eccCCCCCCHHHHHHHHhCCCchHHHHHHHcC
Confidence 87 789999999999863 7999999854
No 21
>PHA02741 hypothetical protein; Provisional
Probab=99.90 E-value=5.5e-23 Score=137.41 Aligned_cols=122 Identities=13% Similarity=0.150 Sum_probs=108.1
Q ss_pred CCcchhHHHHHHHHcCCHHHHHHHHHh-----CCCCCcccCCCCCcHHHHHHhcCC----HHHHHHHHHcCCCCCccCC-
Q 030904 33 ETPPHLRDLAAAAQLGDVHSLRLALDN-----LSGSIDEPVEDGDTALHLTCLYGY----LPCVQLLLERGASLEAKDE- 102 (169)
Q Consensus 33 ~~~~~~t~l~~a~~~g~~~~~~~ll~~-----~~~~~~~~~~~g~~~L~~a~~~~~----~~~~~~ll~~g~~~~~~~~- 102 (169)
.+..|.|+||+|+..|+.++++.|+.. .+++++.+|..|.||||+|+..++ .+++++|++.|++++.++.
T Consensus 17 ~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~ 96 (169)
T PHA02741 17 KNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEML 96 (169)
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcC
Confidence 355788999999999999999998642 257788999999999999999998 5789999999999999885
Q ss_pred CCCChHHHHHhcChHHHHHHHHh-cCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhc
Q 030904 103 DGAIPLHDACAGGFIEIVQLLIN-SASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQ 161 (169)
Q Consensus 103 ~~~t~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~ 161 (169)
.|.||||+|+..++.+++++|++ .|+++ +.+|..|+||||.|. +++++|++.
T Consensus 97 ~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~-------~~~n~~g~tpL~~A~~~~~~~iv~~L~~~ 154 (169)
T PHA02741 97 EGDTALHLAAHRRDHDLAEWLCCQPGIDL-------HFCNADNKSPFELAIDNEDVAMMQILREI 154 (169)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCC-------CcCCCCCCCHHHHHHHCCCHHHHHHHHHH
Confidence 89999999999999999999997 58887 788999999999994 888888874
No 22
>PHA02795 ankyrin-like protein; Provisional
Probab=99.90 E-value=7.7e-23 Score=152.04 Aligned_cols=139 Identities=14% Similarity=0.080 Sum_probs=122.1
Q ss_pred ChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCC-ccc-----CCCCCcHHHHHHhcCCHHH
Q 030904 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSI-DEP-----VEDGDTALHLTCLYGYLPC 86 (169)
Q Consensus 13 ~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~-~~~-----~~~g~~~L~~a~~~~~~~~ 86 (169)
....++++|+.+|++++.. .+.||+|.|+..++.+++++|+.. |++. +.. +..+.+++|.+...++.++
T Consensus 129 n~~eiV~~LI~~GADIn~~----~~~t~lh~A~~~~~~eIVk~Lls~-Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eI 203 (437)
T PHA02795 129 VEIDIVDFMVDHGAVIYKI----ECLNAYFRGICKKESSVVEFILNC-GIPDENDVKLDLYKIIQYTRGFLVDEPTVLEI 203 (437)
T ss_pred CCHHHHHHHHHCCCCCCCC----CCCCHHHHHHHcCcHHHHHHHHhc-CCcccccccchhhhhhccchhHHHHhcCHHHH
Confidence 5667999999999999752 336899999999999999999998 7632 222 1347889999999999999
Q ss_pred HHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-------------h
Q 030904 87 VQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-------------D 153 (169)
Q Consensus 87 ~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-------------~ 153 (169)
+++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++ +.++..|.||||.|+ +
T Consensus 204 ve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdI-------N~~d~~G~TpLh~Aa~~g~~~~~~~~~~e 276 (437)
T PHA02795 204 YKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANV-------NAVMSNGYTCLDVAVDRGSVIARRETHLK 276 (437)
T ss_pred HHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-------CCcCCCCCCHHHHHHHcCCcccccccHHH
Confidence 99999999999999999999999999999999999999999998 899999999999994 5
Q ss_pred HHHHhhhccc
Q 030904 154 LVSLFIMQQE 163 (169)
Q Consensus 154 ~~~~li~~~~ 163 (169)
++++|++++.
T Consensus 277 IvelLL~~ga 286 (437)
T PHA02795 277 ILEILLREPL 286 (437)
T ss_pred HHHHHHhCCC
Confidence 8999998643
No 23
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.90 E-value=8.6e-23 Score=156.69 Aligned_cols=142 Identities=19% Similarity=0.254 Sum_probs=130.2
Q ss_pred CCChHHHHHHHHhcCCCCcccCCCcchhHHHHH-----HHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHH--hcCC
Q 030904 11 EDDSEEDNALFEEDGVNMDLESETPPHLRDLAA-----AAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTC--LYGY 83 (169)
Q Consensus 11 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~-----a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~--~~~~ 83 (169)
.....++++.+++.|++++.. +..+.||||+ |+..++.++++.|++. |++++..+..|.||||+|+ ..++
T Consensus 44 ~~~~~~ivk~Ll~~g~~~~~~--~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~-ga~i~~~d~~g~tpL~~A~~~~~~~ 120 (480)
T PHA03100 44 EARNIDVVKILLDNGADINSS--TKNNSTPLHYLSNIKYNLTDVKEIVKLLLEY-GANVNAPDNNGITPLLYAISKKSNS 120 (480)
T ss_pred ccCCHHHHHHHHHcCCCCCCc--cccCcCHHHHHHHHHHHhhchHHHHHHHHHC-CCCCCCCCCCCCchhhHHHhcccCh
Confidence 456678899999999998754 4467799999 9999999999999998 9999999999999999999 9999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCChHHHHHhcC--hHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHH
Q 030904 84 LPCVQLLLERGASLEAKDEDGAIPLHDACAGG--FIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVS 156 (169)
Q Consensus 84 ~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~ 156 (169)
.+++++|++.|++++..+..|.||||.|+..+ +.+++++|+++|+++ +.++..|.||||+|+ ++++
T Consensus 121 ~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~di-------n~~d~~g~tpL~~A~~~~~~~iv~ 193 (480)
T PHA03100 121 YSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDI-------NAKNRYGYTPLHIAVEKGNIDVIK 193 (480)
T ss_pred HHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCc-------ccccCCCCCHHHHHHHhCCHHHHH
Confidence 99999999999999999999999999999999 999999999999998 788899999999995 8999
Q ss_pred Hhhhcc
Q 030904 157 LFIMQQ 162 (169)
Q Consensus 157 ~li~~~ 162 (169)
+|++.|
T Consensus 194 ~Ll~~g 199 (480)
T PHA03100 194 FLLDNG 199 (480)
T ss_pred HHHHcC
Confidence 999854
No 24
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.90 E-value=7.1e-23 Score=136.42 Aligned_cols=121 Identities=13% Similarity=0.221 Sum_probs=103.1
Q ss_pred CcchhHHHHHHHHcCCH----HHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHH---HHHHHHcCCCCCccC-CCCC
Q 030904 34 TPPHLRDLAAAAQLGDV----HSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPC---VQLLLERGASLEAKD-EDGA 105 (169)
Q Consensus 34 ~~~~~t~l~~a~~~g~~----~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~---~~~ll~~g~~~~~~~-~~~~ 105 (169)
...+.+++|.||..|+. +++++|++. +..++.+|..|+||||+|+..++.+. +++|++.|++++.++ ..|.
T Consensus 17 ~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~-g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~ 95 (166)
T PHA02743 17 DEDEQNTFLRICRTGNIYELMEVAPFISGD-GHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGN 95 (166)
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHHHhhc-chhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCC
Confidence 34555789999999998 445555655 88888889999999999999987654 789999999999998 5899
Q ss_pred ChHHHHHhcChHHHHHHHHh-cCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhcc
Q 030904 106 IPLHDACAGGFIEIVQLLIN-SASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQQ 162 (169)
Q Consensus 106 t~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~~ 162 (169)
||||+|+..++.+++++|++ .|+++ +.++..|.||||+|+ +++++|++.+
T Consensus 96 TpLh~A~~~g~~~iv~~Ll~~~gad~-------~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~g 151 (166)
T PHA02743 96 TLLHIAASTKNYELAEWLCRQLGVNL-------GAINYQHETAYHIAYKMRDRRMMEILRANG 151 (166)
T ss_pred cHHHHHHHhCCHHHHHHHHhccCCCc-------cCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999995 79887 788999999999995 8899999843
No 25
>PHA03095 ankyrin-like protein; Provisional
Probab=99.89 E-value=2.8e-22 Score=153.53 Aligned_cols=139 Identities=19% Similarity=0.124 Sum_probs=120.1
Q ss_pred hHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHc--CCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCH--HHHHH
Q 030904 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQL--GDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYL--PCVQL 89 (169)
Q Consensus 14 ~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~--g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~--~~~~~ 89 (169)
...+++++++.|++++.. +..|.||||+++.. ++.++++.|++. |++++.++..|.||||+|+..++. .++..
T Consensus 166 ~~~iv~~Ll~~g~~~~~~--d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~-g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ 242 (471)
T PHA03095 166 NVELLRLLIDAGADVYAV--DDRFRSLLHHHLQSFKPRARIVRELIRA-GCDPAATDMLGNTPLHSMATGSSCKRSLVLP 242 (471)
T ss_pred CHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHHCCCcHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcCCchHHHHHH
Confidence 456778888888877654 56778889988864 678888888888 899999999999999999998864 57888
Q ss_pred HHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhcc
Q 030904 90 LLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQQ 162 (169)
Q Consensus 90 ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~~ 162 (169)
++..|++++.+|..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||.|+ +++++|+..+
T Consensus 243 ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~-------n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~ 313 (471)
T PHA03095 243 LLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADI-------NAVSSDGNTPLSLMVRNNNGRAVRAALAKN 313 (471)
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-------cccCCCCCCHHHHHHHhCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999998 799999999999995 8888888754
No 26
>PHA02798 ankyrin-like protein; Provisional
Probab=99.89 E-value=3.1e-22 Score=153.93 Aligned_cols=113 Identities=23% Similarity=0.283 Sum_probs=59.0
Q ss_pred hHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHc-----CCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcC---CHH
Q 030904 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQL-----GDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYG---YLP 85 (169)
Q Consensus 14 ~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~-----g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~---~~~ 85 (169)
..+++++|++.|++++.. +..|.||||.++.. +..+++++|++. |+++|.++..|.||||+|+..+ +.+
T Consensus 50 ~~~iv~~Ll~~Gadvn~~--d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~-GadiN~~d~~G~TpLh~a~~~~~~~~~~ 126 (489)
T PHA02798 50 STDIVKLFINLGANVNGL--DNEYSTPLCTILSNIKDYKHMLDIVKILIEN-GADINKKNSDGETPLYCLLSNGYINNLE 126 (489)
T ss_pred CHHHHHHHHHCCCCCCCC--CCCCCChHHHHHHhHHhHHhHHHHHHHHHHC-CCCCCCCCCCcCcHHHHHHHcCCcChHH
Confidence 445555555555555432 23444555554432 345555555554 5555555555555555555443 345
Q ss_pred HHHHHHHcCCCCCccCCCCCChHHHHHhcCh---HHHHHHHHhcCCC
Q 030904 86 CVQLLLERGASLEAKDEDGAIPLHDACAGGF---IEIVQLLINSASG 129 (169)
Q Consensus 86 ~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~---~~~~~~ll~~~~~ 129 (169)
++++|++.|++++.+|..|.||||+|++.++ .+++++|++.|++
T Consensus 127 iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gad 173 (489)
T PHA02798 127 ILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVD 173 (489)
T ss_pred HHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCC
Confidence 5555555555555555555555555555544 4555555555443
No 27
>PHA02798 ankyrin-like protein; Provisional
Probab=99.89 E-value=3.1e-22 Score=153.90 Aligned_cols=139 Identities=17% Similarity=0.223 Sum_probs=104.7
Q ss_pred CChHHHHHHHHhcCCCCcccCCCcchhHHHHHHH--HcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhc-----CCH
Q 030904 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAA--QLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLY-----GYL 84 (169)
Q Consensus 12 ~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~--~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~-----~~~ 84 (169)
....+.++++++.+...+. ..+.|+++.+. ..++.+++++|++. |++++.++..|.||||.++.. +..
T Consensus 15 ~~~~~~v~~ll~~~~~~~~----~~~~~~~~~yl~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~TpL~~~~~n~~~~~~~~ 89 (489)
T PHA02798 15 NVKLSTVKLLIKSCNPNEI----VNEYSIFQKYLQRDSPSTDIVKLFINL-GANVNGLDNEYSTPLCTILSNIKDYKHML 89 (489)
T ss_pred cccHHHHHHHHhcCChhhh----cccchHHHHHHhCCCCCHHHHHHHHHC-CCCCCCCCCCCCChHHHHHHhHHhHHhHH
Confidence 3455577777765432222 23445555333 34578889999887 889988888899999887653 557
Q ss_pred HHHHHHHHcCCCCCccCCCCCChHHHHHhcC---hHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh--------h
Q 030904 85 PCVQLLLERGASLEAKDEDGAIPLHDACAGG---FIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN--------D 153 (169)
Q Consensus 85 ~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~--------~ 153 (169)
+++++|++.|++++.+|..|.||||+|+..+ +.+++++|+++|+++ +.+|..|.||||+|+ +
T Consensus 90 ~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv-------n~~d~~g~tpL~~a~~~~~~~~~~ 162 (489)
T PHA02798 90 DIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADT-------TLLDKDGFTMLQVYLQSNHHIDIE 162 (489)
T ss_pred HHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCc-------cccCCCCCcHHHHHHHcCCcchHH
Confidence 8899999999999998888999999998875 678889999999887 788888999998763 6
Q ss_pred HHHHhhhcc
Q 030904 154 LVSLFIMQQ 162 (169)
Q Consensus 154 ~~~~li~~~ 162 (169)
++++|++.|
T Consensus 163 vv~~Ll~~g 171 (489)
T PHA02798 163 IIKLLLEKG 171 (489)
T ss_pred HHHHHHHhC
Confidence 788888853
No 28
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.89 E-value=4.3e-22 Score=153.31 Aligned_cols=146 Identities=16% Similarity=0.167 Sum_probs=108.3
Q ss_pred ChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHc---CCHHHHHHHHHhCCCCC-cccCCCCCcHHHHHHhc--CCHHH
Q 030904 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQL---GDVHSLRLALDNLSGSI-DEPVEDGDTALHLTCLY--GYLPC 86 (169)
Q Consensus 13 ~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~---g~~~~~~~ll~~~~~~~-~~~~~~g~~~L~~a~~~--~~~~~ 86 (169)
...+++++|++.|++++.. +..|.||||.|+.. ++.+++++|++. |+++ +.++..|.||||+|+.. ++.++
T Consensus 86 ~~~~iv~~Ll~~Gadin~~--d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~-Gadin~~~d~~g~tpLh~a~~~~~~~~~i 162 (494)
T PHA02989 86 KIKKIVKLLLKFGADINLK--TFNGVSPIVCFIYNSNINNCDMLRFLLSK-GINVNDVKNSRGYNLLHMYLESFSVKKDV 162 (494)
T ss_pred hHHHHHHHHHHCCCCCCCC--CCCCCcHHHHHHHhcccCcHHHHHHHHHC-CCCcccccCCCCCCHHHHHHHhccCCHHH
Confidence 3456788888888887754 44677888877654 568888888887 8888 77888888888887653 57788
Q ss_pred HHHHHHcCCCCCc-cCCCCCChHHHHHhcC----hHHHHHHHHhcCCCchhhhh----------------------h---
Q 030904 87 VQLLLERGASLEA-KDEDGAIPLHDACAGG----FIEIVQLLINSASGTECVKR----------------------M--- 136 (169)
Q Consensus 87 ~~~ll~~g~~~~~-~~~~~~t~l~~a~~~~----~~~~~~~ll~~~~~~~~~~~----------------------~--- 136 (169)
+++|+++|++++. .+..|.||||.|++.+ +.+++++|++.|++++.... +
T Consensus 163 v~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~ 242 (494)
T PHA02989 163 IKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNF 242 (494)
T ss_pred HHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHH
Confidence 8888888888877 5677888888876654 77888888888877642110 0
Q ss_pred ------hhcccCCCCCcccchh-----hHHHHhhhc
Q 030904 137 ------LETVDAEGDTDCDDQN-----DLVSLFIMQ 161 (169)
Q Consensus 137 ------~~~~~~~g~tpl~~A~-----~~~~~li~~ 161 (169)
++.+|..|.||||+|+ +++++|++.
T Consensus 243 l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~ 278 (494)
T PHA02989 243 ILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKL 278 (494)
T ss_pred HHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHc
Confidence 2566777888888885 778888874
No 29
>PHA02946 ankyin-like protein; Provisional
Probab=99.88 E-value=6.6e-22 Score=150.06 Aligned_cols=106 Identities=16% Similarity=0.241 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcC--CHHHHHHHHHcCCCCCccCCCCCChHHHHHhcC--hHHHHHHH
Q 030904 48 GDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYG--YLPCVQLLLERGASLEAKDEDGAIPLHDACAGG--FIEIVQLL 123 (169)
Q Consensus 48 g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~--~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~--~~~~~~~l 123 (169)
|+.++++.|++. |++++.+|..|+||||+|+..+ +.+++++|++.|++++.+|..|.||||+|+..+ +.+++++|
T Consensus 151 ~~~~vv~~Ll~~-gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lL 229 (446)
T PHA02946 151 PSERVFKKIMSI-GFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLL 229 (446)
T ss_pred CChHHHHHHHhc-cccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHH
Confidence 333444444433 4444444445555555544432 234555555555555555555556666655543 45555555
Q ss_pred HhcCCCchhhhhhhhcccCCCCCcccchh------hHHHHhhhcc
Q 030904 124 INSASGTECVKRMLETVDAEGDTDCDDQN------DLVSLFIMQQ 162 (169)
Q Consensus 124 l~~~~~~~~~~~~~~~~~~~g~tpl~~A~------~~~~~li~~~ 162 (169)
++ |+++ +.+|..|.||||+|+ +++++|++.+
T Consensus 230 l~-gadi-------n~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g 266 (446)
T PHA02946 230 LP-STDV-------NKQNKFGDSPLTLLIKTLSPAHLINKLLSTS 266 (446)
T ss_pred Hc-CCCC-------CCCCCCCCCHHHHHHHhCChHHHHHHHHhCC
Confidence 53 4444 555666666666553 3445555543
No 30
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.88 E-value=6.1e-22 Score=160.09 Aligned_cols=138 Identities=16% Similarity=0.133 Sum_probs=118.2
Q ss_pred ChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 030904 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (169)
Q Consensus 13 ~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~ 92 (169)
+....++.+++.|++++. .+..|.||||+|+..|+.++++.|++. |++++.+|..|.||||+|+..|+.+++++|+.
T Consensus 536 g~~~~l~~Ll~~G~d~n~--~d~~G~TpLh~Aa~~g~~~~v~~Ll~~-gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~ 612 (823)
T PLN03192 536 GNAALLEELLKAKLDPDI--GDSKGRTPLHIAASKGYEDCVLVLLKH-ACNVHIRDANGNTALWNAISAKHHKIFRILYH 612 (823)
T ss_pred CCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHcChHHHHHHHHhc-CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHh
Confidence 455677888888888875 456788999999999999999999987 89999999999999999999999999999988
Q ss_pred cCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhcc
Q 030904 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQQ 162 (169)
Q Consensus 93 ~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~~ 162 (169)
.++..+. ..+.++||.|+..|+.++++.|+++|+++ +.+|.+|+||||+|+ +++++|++.|
T Consensus 613 ~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadi-------n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~G 678 (823)
T PLN03192 613 FASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNV-------DSEDHQGATALQVAMAEDHVDMVRLLIMNG 678 (823)
T ss_pred cCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCC-------CCCCCCCCCHHHHHHHCCcHHHHHHHHHcC
Confidence 7765443 34668999999999999999999999998 789999999999995 8999999854
No 31
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.88 E-value=8.5e-22 Score=151.66 Aligned_cols=139 Identities=17% Similarity=0.203 Sum_probs=118.4
Q ss_pred hHHHHHHHHhcCCCC-cccCCCcchhHHHHHHHHc--CCHHHHHHHHHhCCCCCcc-cCCCCCcHHHHHHhcC----CHH
Q 030904 14 SEEDNALFEEDGVNM-DLESETPPHLRDLAAAAQL--GDVHSLRLALDNLSGSIDE-PVEDGDTALHLTCLYG----YLP 85 (169)
Q Consensus 14 ~~~~~~~l~~~g~~~-~~~~~~~~~~t~l~~a~~~--g~~~~~~~ll~~~~~~~~~-~~~~g~~~L~~a~~~~----~~~ 85 (169)
..+++++|++.|+++ +. .+..|.||||+|+.. ++.++++.|++. |++++. .+..|.||||+++..+ +.+
T Consensus 123 ~~eiv~~Ll~~Gadin~~--~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~-Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~ 199 (494)
T PHA02989 123 NCDMLRFLLSKGINVNDV--KNSRGYNLLHMYLESFSVKKDVIKILLSF-GVNLFEKTSLYGLTPMNIYLRNDIDVISIK 199 (494)
T ss_pred cHHHHHHHHHCCCCcccc--cCCCCCCHHHHHHHhccCCHHHHHHHHHc-CCCccccccccCCChHHHHHhcccccccHH
Confidence 467889999999998 44 456788999998754 588999999988 999887 5788999999987654 788
Q ss_pred HHHHHHHcCCCCCc--------------------------------------cCCCCCChHHHHHhcChHHHHHHHHhcC
Q 030904 86 CVQLLLERGASLEA--------------------------------------KDEDGAIPLHDACAGGFIEIVQLLINSA 127 (169)
Q Consensus 86 ~~~~ll~~g~~~~~--------------------------------------~~~~~~t~l~~a~~~~~~~~~~~ll~~~ 127 (169)
++++|++.|++++. +|..|.||||+|+..|+.+++++|++.|
T Consensus 200 iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~G 279 (494)
T PHA02989 200 VIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLG 279 (494)
T ss_pred HHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcC
Confidence 99999988876553 4556999999999999999999999999
Q ss_pred CCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhcc
Q 030904 128 SGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQQ 162 (169)
Q Consensus 128 ~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~~ 162 (169)
+++ +.+|..|.||||+|+ ++++.|++.+
T Consensus 280 adi-------n~~d~~G~TpL~~A~~~~~~~iv~~LL~~~ 312 (494)
T PHA02989 280 DDI-------YNVSKDGDTVLTYAIKHGNIDMLNRILQLK 312 (494)
T ss_pred CCc-------cccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 998 899999999999995 8889988854
No 32
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.88 E-value=7.6e-22 Score=127.33 Aligned_cols=113 Identities=27% Similarity=0.299 Sum_probs=104.1
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHH
Q 030904 41 LAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIV 120 (169)
Q Consensus 41 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~ 120 (169)
+.+|+..+....|+.||+...-.+|.+|.+|+||||.|++.++.++++.|+.+|++.+++...|+||||.||.-.+.+++
T Consensus 67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va 146 (228)
T KOG0512|consen 67 LLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVA 146 (228)
T ss_pred HHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHH
Confidence 78999999999999999985556999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCchhhhhhhhcccCCCCCcccchh------hHHHHhhh
Q 030904 121 QLLINSASGTECVKRMLETVDAEGDTDCDDQN------DLVSLFIM 160 (169)
Q Consensus 121 ~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~------~~~~~li~ 160 (169)
.+|+++|+++ |.+..-..||||+|+ ..+.+|+.
T Consensus 147 ~~LLqhgaDV-------nA~t~g~ltpLhlaa~~rn~r~t~~~Ll~ 185 (228)
T KOG0512|consen 147 GRLLQHGADV-------NAQTKGLLTPLHLAAGNRNSRDTLELLLH 185 (228)
T ss_pred HHHHhccCcc-------cccccccchhhHHhhcccchHHHHHHHhh
Confidence 9999999998 788888899999995 56666666
No 33
>PHA02730 ankyrin-like protein; Provisional
Probab=99.87 E-value=1.4e-21 Score=151.69 Aligned_cols=140 Identities=16% Similarity=0.172 Sum_probs=120.9
Q ss_pred ChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCC----HHHHHHHHHhCCC--CCcccCCCCCcHHHH---HHhcC-
Q 030904 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGD----VHSLRLALDNLSG--SIDEPVEDGDTALHL---TCLYG- 82 (169)
Q Consensus 13 ~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~----~~~~~~ll~~~~~--~~~~~~~~g~~~L~~---a~~~~- 82 (169)
...+++++|+++|++++.. ..|.||||+|+..++ .+++++|+.+ |+ +++.++..|.||||. +...+
T Consensus 357 v~ieIvelLIs~GAdIN~k---~~G~TpLH~Aa~~nnn~i~~eIvelLIs~-Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~ 432 (672)
T PHA02730 357 VSIPILRCMLDNGATMDKT---TDNNYPLHDYFVNNNNIVDVNVVRFIVEN-NGHMAINHVSNNGRLCMYGLILSRFNNC 432 (672)
T ss_pred CcHHHHHHHHHCCCCCCcC---CCCCcHHHHHHHHcCCcchHHHHHHHHHc-CCCccccccccCCCchHhHHHHHHhccc
Confidence 4678999999999999852 578899999998875 8999999998 65 688889999999984 33222
Q ss_pred --------CHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccC-CCCCcccchh-
Q 030904 83 --------YLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDA-EGDTDCDDQN- 152 (169)
Q Consensus 83 --------~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~-~g~tpl~~A~- 152 (169)
..+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|+++ +.++. .|.||+|.|+
T Consensus 433 ~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdI-------N~~d~~~g~TaL~~Aa~ 505 (672)
T PHA02730 433 GYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASV-------NTTSRSIINTAIQKSSY 505 (672)
T ss_pred cccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCC-------CCCCCcCCcCHHHHHHH
Confidence 235699999999999999999999999999999999999999999998 78886 5999999985
Q ss_pred ------hHHHHhhhccc
Q 030904 153 ------DLVSLFIMQQE 163 (169)
Q Consensus 153 ------~~~~~li~~~~ 163 (169)
+++++|++.+.
T Consensus 506 ~~~~~~eIv~~LLs~ga 522 (672)
T PHA02730 506 RRENKTKLVDLLLSYHP 522 (672)
T ss_pred hhcCcHHHHHHHHHcCC
Confidence 49999998764
No 34
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.87 E-value=2.5e-21 Score=154.15 Aligned_cols=137 Identities=20% Similarity=0.288 Sum_probs=83.4
Q ss_pred hHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCC-HHHHHHHHH
Q 030904 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGY-LPCVQLLLE 92 (169)
Q Consensus 14 ~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~-~~~~~~ll~ 92 (169)
...++.++++.|++++.. +..|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+..+. ..++++|++
T Consensus 354 ~~~iv~lLl~~gadin~~--d~~G~TpLh~Aa~~~~~~iv~~Ll~~-gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~ 430 (682)
T PHA02876 354 NKDIVITLLELGANVNAR--DYCDKTPIHYAAVRNNVVIINTLLDY-GADIEALSQKIGTALHFALCGTNPYMSVKTLID 430 (682)
T ss_pred cHHHHHHHHHcCCCCccC--CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCccccCCCCCchHHHHHHcCCHHHHHHHHHh
Confidence 344555556666655533 33555666666666666666666665 66666666666666666655443 345666666
Q ss_pred cCCCCCccCCCCCChHHHHHhcC-hHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh---hHHHHhhh
Q 030904 93 RGASLEAKDEDGAIPLHDACAGG-FIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN---DLVSLFIM 160 (169)
Q Consensus 93 ~g~~~~~~~~~~~t~l~~a~~~~-~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~---~~~~~li~ 160 (169)
.|++++.+|..|+||||+|+..+ +.+++++|++.|+++ +.+|..|.||++.|+ .+++.|+.
T Consensus 431 ~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~-------n~~d~~g~tpl~~a~~~~~~v~~Ll~ 495 (682)
T PHA02876 431 RGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADV-------NAINIQNQYPLLIALEYHGIVNILLH 495 (682)
T ss_pred CCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCC-------CCCCCCCCCHHHHHHHhCCHHHHHHH
Confidence 66666666666666666666654 456666666666665 566666666666664 44555544
No 35
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.87 E-value=6.7e-22 Score=144.75 Aligned_cols=144 Identities=24% Similarity=0.380 Sum_probs=128.1
Q ss_pred CCChHHHHHHHHh-cCCC------CcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCC
Q 030904 11 EDDSEEDNALFEE-DGVN------MDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGY 83 (169)
Q Consensus 11 ~~~~~~~~~~l~~-~g~~------~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~ 83 (169)
+.+..++++++++ -+++ +.+....-.|..||-.|+..|++++++.|+.. |+.+|.......|||-.||.-|+
T Consensus 51 RnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~-ga~VN~tT~TNStPLraACfDG~ 129 (615)
T KOG0508|consen 51 RNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRR-GASVNDTTRTNSTPLRAACFDGH 129 (615)
T ss_pred hcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHh-cCccccccccCCccHHHHHhcch
Confidence 4455677888876 3444 44566677888888888889999999999998 89999888888899999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHh
Q 030904 84 LPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLF 158 (169)
Q Consensus 84 ~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~l 158 (169)
.+++++|+++|+|+++.|+.|.|+|++||..|+.+++++|++.|+++ |.++.+|+|+||.++ +++++|
T Consensus 130 leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADv-------n~ks~kGNTALH~caEsG~vdivq~L 202 (615)
T KOG0508|consen 130 LEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADV-------NAKSYKGNTALHDCAESGSVDIVQLL 202 (615)
T ss_pred hHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCc-------chhcccCchHHHhhhhcccHHHHHHH
Confidence 99999999999999999999999999999999999999999999998 899999999999885 999999
Q ss_pred hhcc
Q 030904 159 IMQQ 162 (169)
Q Consensus 159 i~~~ 162 (169)
+..+
T Consensus 203 l~~g 206 (615)
T KOG0508|consen 203 LKHG 206 (615)
T ss_pred HhCC
Confidence 9854
No 36
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.87 E-value=4.9e-21 Score=152.50 Aligned_cols=146 Identities=19% Similarity=0.208 Sum_probs=95.4
Q ss_pred hHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcC-CHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhc-CCHHHHHHHH
Q 030904 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLG-DVHSLRLALDNLSGSIDEPVEDGDTALHLTCLY-GYLPCVQLLL 91 (169)
Q Consensus 14 ~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g-~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~-~~~~~~~~ll 91 (169)
...+++++++.|++++.. +..|.||||+|+..| ..+.++.|+.. |++++..+..|.||||+|+.. +..+++.+|+
T Consensus 286 ~~~iv~lLl~~gadin~~--d~~g~TpLh~Aa~~g~~~~~v~~Ll~~-gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl 362 (682)
T PHA02876 286 LSRLVPKLLERGADVNAK--NIKGETPLYLMAKNGYDTENIRTLIML-GADVNAADRLYITPLHQASTLDRNKDIVITLL 362 (682)
T ss_pred HHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHhCCCHHHHHHHHHc-CCCCCCcccCCCcHHHHHHHhCCcHHHHHHHH
Confidence 345677777777766543 345667777777766 46666666665 666666666666666666654 3455666666
Q ss_pred HcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchh---------------------hhhh------hhcccCCC
Q 030904 92 ERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTEC---------------------VKRM------LETVDAEG 144 (169)
Q Consensus 92 ~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~---------------------~~~~------~~~~~~~g 144 (169)
+.|++++.+|..|.||||+|+..|+.+++++|+++|++++. ++.+ ++.+|..|
T Consensus 363 ~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G 442 (682)
T PHA02876 363 ELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDL 442 (682)
T ss_pred HcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCC
Confidence 66666666666666666666666666666666666655421 0011 26788889
Q ss_pred CCcccchh------hHHHHhhhcc
Q 030904 145 DTDCDDQN------DLVSLFIMQQ 162 (169)
Q Consensus 145 ~tpl~~A~------~~~~~li~~~ 162 (169)
+||||+|+ +++++|++.|
T Consensus 443 ~TpLh~Aa~~~~~~~iv~lLl~~G 466 (682)
T PHA02876 443 STPLHYACKKNCKLDVIEMLLDNG 466 (682)
T ss_pred ChHHHHHHHhCCcHHHHHHHHHCC
Confidence 99999884 6788888844
No 37
>PHA02917 ankyrin-like protein; Provisional
Probab=99.87 E-value=4.9e-21 Score=150.77 Aligned_cols=141 Identities=20% Similarity=0.161 Sum_probs=110.1
Q ss_pred hHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcC-----------------------------------CHHHHHHHHH
Q 030904 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLG-----------------------------------DVHSLRLALD 58 (169)
Q Consensus 14 ~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g-----------------------------------~~~~~~~ll~ 58 (169)
..+++++|++.|++++ ..+..|+||||+|+..| +.+++++|++
T Consensus 47 ~~~~v~~Ll~~ga~v~--~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~ 124 (661)
T PHA02917 47 NVEVVKLLLDSGTNPL--HKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLVE 124 (661)
T ss_pred cHHHHHHHHHCCCCcc--ccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHHH
Confidence 3567777777777775 34556667777666543 4566777777
Q ss_pred hCCCCCcccCCCCCcHHHHH--HhcCCHHHHHHHHHcCCCCCccCC---CC-----------CChHHHHHh---------
Q 030904 59 NLSGSIDEPVEDGDTALHLT--CLYGYLPCVQLLLERGASLEAKDE---DG-----------AIPLHDACA--------- 113 (169)
Q Consensus 59 ~~~~~~~~~~~~g~~~L~~a--~~~~~~~~~~~ll~~g~~~~~~~~---~~-----------~t~l~~a~~--------- 113 (169)
. |++++.+|..|+||||.+ +..++.+++++|+++|++++..|. .| .||||+|+.
T Consensus 125 ~-Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ 203 (661)
T PHA02917 125 H-GFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDT 203 (661)
T ss_pred c-CCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccc
Confidence 7 899999999999999854 346899999999999999876543 23 599999975
Q ss_pred --cChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-------hHHHHhhhcccc
Q 030904 114 --GGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-------DLVSLFIMQQEV 164 (169)
Q Consensus 114 --~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-------~~~~~li~~~~~ 164 (169)
.++.+++++|+++|+++ +.+|.+|.||||+|+ +++++|+..++.
T Consensus 204 ~~~~~~eiv~~Li~~Gadv-------n~~d~~G~TpLh~A~~~g~~~~eivk~Li~g~d~ 256 (661)
T PHA02917 204 RAYVRPEVVKCLINHGIKP-------SSIDKNYCTALQYYIKSSHIDIDIVKLLMKGIDN 256 (661)
T ss_pred cccCcHHHHHHHHHCCCCc-------ccCCCCCCcHHHHHHHcCCCcHHHHHHHHhCCcc
Confidence 45889999999999998 899999999999995 699999875544
No 38
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.86 E-value=3.5e-21 Score=137.98 Aligned_cols=106 Identities=13% Similarity=0.135 Sum_probs=63.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCCCcccC----CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCcc-CCCCCChHHHHHh
Q 030904 39 RDLAAAAQLGDVHSLRLALDNLSGSIDEPV----EDGDTALHLTCLYGYLPCVQLLLERGASLEAK-DEDGAIPLHDACA 113 (169)
Q Consensus 39 t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~----~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~~t~l~~a~~ 113 (169)
++||.|+..|+.++++.|++. |++++.++ ..|.||||+|+..++.+++++|++.|++++.+ +..|.||||.|+.
T Consensus 35 ~lL~~A~~~~~~eivk~LL~~-GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~ 113 (300)
T PHA02884 35 NILYSSIKFHYTDIIDAILKL-GADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVL 113 (300)
T ss_pred HHHHHHHHcCCHHHHHHHHHC-CCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHH
Confidence 345555555666666666655 66665542 35666666666666666666666666666654 3356666666666
Q ss_pred cChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh
Q 030904 114 GGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN 152 (169)
Q Consensus 114 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~ 152 (169)
.++.+++++|++.|+++ +.+|..|.||+|+|+
T Consensus 114 ~~~~eivklLL~~GAdi-------n~kd~~G~TpL~~A~ 145 (300)
T PHA02884 114 HGCLKCLEILLSYGADI-------NIQTNDMVTPIELAL 145 (300)
T ss_pred cCCHHHHHHHHHCCCCC-------CCCCCCCCCHHHHHH
Confidence 66666666666666665 455666666666653
No 39
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.86 E-value=6.2e-22 Score=132.26 Aligned_cols=123 Identities=25% Similarity=0.280 Sum_probs=112.1
Q ss_pred cCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHH
Q 030904 31 ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHD 110 (169)
Q Consensus 31 ~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~ 110 (169)
+..+++|+|||.||+.+|+++.+++||+. |++++...+...++|.+|++.|..++|++|+.++.++|.-|++|-|||-+
T Consensus 154 N~~De~GfTpLiWAaa~G~i~vV~fLL~~-GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLly 232 (296)
T KOG0502|consen 154 NACDEFGFTPLIWAAAKGHIPVVQFLLNS-GADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLY 232 (296)
T ss_pred cCccccCchHhHHHHhcCchHHHHHHHHc-CCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeee
Confidence 45678999999999999999999999998 99999888888999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh----hHHHHhhhc
Q 030904 111 ACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN----DLVSLFIMQ 161 (169)
Q Consensus 111 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~----~~~~~li~~ 161 (169)
|++.+|..|++.|++.|+++ +..+..|.+++.+|+ .+|+..|++
T Consensus 233 Avrgnhvkcve~Ll~sGAd~-------t~e~dsGy~~mdlAValGyr~Vqqvie~ 280 (296)
T KOG0502|consen 233 AVRGNHVKCVESLLNSGADV-------TQEDDSGYWIMDLAVALGYRIVQQVIEK 280 (296)
T ss_pred eecCChHHHHHHHHhcCCCc-------ccccccCCcHHHHHHHhhhHHHHHHHHH
Confidence 99999999999999999998 788999999999995 556655553
No 40
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.86 E-value=1.5e-21 Score=135.47 Aligned_cols=117 Identities=28% Similarity=0.384 Sum_probs=109.3
Q ss_pred cCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHH
Q 030904 31 ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHD 110 (169)
Q Consensus 31 ~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~ 110 (169)
+..+.-|++|||+||..|+..+++.|+.. |+.+|..+....||||+|+.+|+.++++.|+++.+++|+.+..|.||||+
T Consensus 28 n~gddhgfsplhwaakegh~aivemll~r-garvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhy 106 (448)
T KOG0195|consen 28 NVGDDHGFSPLHWAAKEGHVAIVEMLLSR-GARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHY 106 (448)
T ss_pred ccccccCcchhhhhhhcccHHHHHHHHhc-ccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhh
Confidence 34466889999999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchhhHH
Q 030904 111 ACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDLV 155 (169)
Q Consensus 111 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~~~~ 155 (169)
||.-|...+.+-|+..|+.+ ++-|++|.||+.-|....
T Consensus 107 acfwgydqiaedli~~ga~v-------~icnk~g~tpldkakp~l 144 (448)
T KOG0195|consen 107 ACFWGYDQIAEDLISCGAAV-------NICNKKGMTPLDKAKPML 144 (448)
T ss_pred hhhhcHHHHHHHHHhcccee-------eecccCCCCchhhhchHH
Confidence 99999999999999999997 899999999999995433
No 41
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.86 E-value=1.9e-21 Score=128.17 Aligned_cols=123 Identities=19% Similarity=0.131 Sum_probs=99.0
Q ss_pred CCcchhHHHHHHHHcCCHHHHHHHHHh----CCCCCcccCCCCCcHHHHHHhcCCH---HHHHHHHHcCCCCCccC-CCC
Q 030904 33 ETPPHLRDLAAAAQLGDVHSLRLALDN----LSGSIDEPVEDGDTALHLTCLYGYL---PCVQLLLERGASLEAKD-EDG 104 (169)
Q Consensus 33 ~~~~~~t~l~~a~~~g~~~~~~~ll~~----~~~~~~~~~~~g~~~L~~a~~~~~~---~~~~~ll~~g~~~~~~~-~~~ 104 (169)
.+..|.||||+|+..|+...+...... .+...+.++..|.||||+|+..++. +++++|++.|++++.++ ..|
T Consensus 13 ~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g 92 (154)
T PHA02736 13 PDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFG 92 (154)
T ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCC
Confidence 355688999999999984322221111 0112335688999999999999876 46889999999999998 489
Q ss_pred CChHHHHHhcChHHHHHHHHh-cCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhcc
Q 030904 105 AIPLHDACAGGFIEIVQLLIN-SASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQQ 162 (169)
Q Consensus 105 ~t~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~~ 162 (169)
.||||+|+..++.+++++|++ .|+++ +.+|..|.||||+|+ +++++|+..+
T Consensus 93 ~T~Lh~A~~~~~~~i~~~Ll~~~g~d~-------n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~g 149 (154)
T PHA02736 93 NTPLHIAVYTQNYELATWLCNQPGVNM-------EILNYAFKTPYYVACERHDAKMMNILRAKG 149 (154)
T ss_pred CcHHHHHHHhCCHHHHHHHHhCCCCCC-------ccccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999997 58887 789999999999995 8899998854
No 42
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.86 E-value=5.1e-21 Score=147.65 Aligned_cols=146 Identities=26% Similarity=0.320 Sum_probs=124.5
Q ss_pred CCCChHHHHHHHHhcCCCCcc-------------cCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHH
Q 030904 10 EEDDSEEDNALFEEDGVNMDL-------------ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALH 76 (169)
Q Consensus 10 ~~~~~~~~~~~l~~~g~~~~~-------------~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~ 76 (169)
.++...+..+..++.|..... +..+..|.||||+||+.|+.+++..|+.. |++++.++.++.+|||
T Consensus 233 ve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~-Ga~I~~kn~d~~spLH 311 (929)
T KOG0510|consen 233 VEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGF-GASINSKNKDEESPLH 311 (929)
T ss_pred hhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHc-CCcccccCCCCCCchH
Confidence 345566666666666554421 33466789999999999999999999998 9999999999999999
Q ss_pred HHHhcCCHHHHHHHHH-cC-CCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhh--cccCCCCCcccchh
Q 030904 77 LTCLYGYLPCVQLLLE-RG-ASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLE--TVDAEGDTDCDDQN 152 (169)
Q Consensus 77 ~a~~~~~~~~~~~ll~-~g-~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~--~~~~~g~tpl~~A~ 152 (169)
.|+.+|+..+++-|++ .+ ...+..|-.|.||||.|+++||..+++.|++.|+... + ..|.+|.||||.|+
T Consensus 312 ~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~------~~~e~D~dg~TaLH~Aa 385 (929)
T KOG0510|consen 312 FAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFL------NMSEADSDGNTALHLAA 385 (929)
T ss_pred HHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhh------cccccccCCchhhhHHH
Confidence 9999999999999998 55 4568899999999999999999999999999999872 3 44999999999995
Q ss_pred -----hHHHHhhhcc
Q 030904 153 -----DLVSLFIMQQ 162 (169)
Q Consensus 153 -----~~~~~li~~~ 162 (169)
..+++||..|
T Consensus 386 ~~g~~~av~~Li~~G 400 (929)
T KOG0510|consen 386 KYGNTSAVQKLISHG 400 (929)
T ss_pred HhccHHHHHHHHHcC
Confidence 8999999964
No 43
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.86 E-value=1.9e-20 Score=134.23 Aligned_cols=138 Identities=14% Similarity=0.133 Sum_probs=116.5
Q ss_pred ChHHHHHHHHhcCCCCcccC--CCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCccc-CCCCCcHHHHHHhcCCHHHHHH
Q 030904 13 DSEEDNALFEEDGVNMDLES--ETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEP-VEDGDTALHLTCLYGYLPCVQL 89 (169)
Q Consensus 13 ~~~~~~~~l~~~g~~~~~~~--~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~~g~~~L~~a~~~~~~~~~~~ 89 (169)
...+++++|++.|++++... .+..|.||||+|+..++.+++++|++. |++++.+ +..|.||||+|+..++.+++++
T Consensus 44 ~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~-GADVN~~~~~~g~TpLh~Aa~~~~~eivkl 122 (300)
T PHA02884 44 HYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRY-GADVNRYAEEAKITPLYISVLHGCLKCLEI 122 (300)
T ss_pred CCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcCcccCCCCCCHHHHHHHcCCHHHHHH
Confidence 45678999999999998643 245789999999999999999999998 9999986 4679999999999999999999
Q ss_pred HHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccch--hhHHHHhhhccc
Q 030904 90 LLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQ--NDLVSLFIMQQE 163 (169)
Q Consensus 90 ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A--~~~~~~li~~~~ 163 (169)
|+..|++++.+|..|.||||+|++.++.+++.++... . .+..+.+|++.+ .+++++|+++.-
T Consensus 123 LL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~--~----------~~~~~~~~~~~~~n~ei~~~Lish~v 186 (300)
T PHA02884 123 LLSYGADINIQTNDMVTPIELALMICNNFLAFMICDN--E----------ISNFYKHPKKILINFDILKILVSHFI 186 (300)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCC--c----------ccccccChhhhhccHHHHHHHHHHHH
Confidence 9999999999999999999999999988887665432 2 245667888865 488888877543
No 44
>PHA02795 ankyrin-like protein; Provisional
Probab=99.85 E-value=1.9e-20 Score=139.39 Aligned_cols=144 Identities=14% Similarity=0.008 Sum_probs=122.9
Q ss_pred CCCCChHHHHHHHHhcCCCCcc----cCCCcchhHHHHHHHH--cCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcC
Q 030904 9 MEEDDSEEDNALFEEDGVNMDL----ESETPPHLRDLAAAAQ--LGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYG 82 (169)
Q Consensus 9 ~~~~~~~~~~~~l~~~g~~~~~----~~~~~~~~t~l~~a~~--~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~ 82 (169)
......-++++++..+|+++++ -..+...+|+||+++. .|+.+++++|+++ |++++.. .+.||+|+|+..+
T Consensus 84 ~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~-GADIn~~--~~~t~lh~A~~~~ 160 (437)
T PHA02795 84 FAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDH-GAVIYKI--ECLNAYFRGICKK 160 (437)
T ss_pred HhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHC-CCCCCCC--CCCCHHHHHHHcC
Confidence 3445677899999999999881 1245568899999999 8999999999998 9999874 4589999999999
Q ss_pred CHHHHHHHHHcCCCC-Ccc-----CCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh----
Q 030904 83 YLPCVQLLLERGASL-EAK-----DEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN---- 152 (169)
Q Consensus 83 ~~~~~~~ll~~g~~~-~~~-----~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~---- 152 (169)
+.+++++|+++|++. +.. +..+.|++|.+...++.+++++|+++|+++ +.+|..|.||||+|+
T Consensus 161 ~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADI-------N~kD~~G~TpLh~Aa~~g~ 233 (437)
T PHA02795 161 ESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDI-------NQLDAGGRTLLYRAIYAGY 233 (437)
T ss_pred cHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCc-------CcCCCCCCCHHHHHHHcCC
Confidence 999999999999853 222 134778999999999999999999999998 899999999999995
Q ss_pred -hHHHHhhhcc
Q 030904 153 -DLVSLFIMQQ 162 (169)
Q Consensus 153 -~~~~~li~~~ 162 (169)
+++++|++.|
T Consensus 234 ~eiVelLL~~G 244 (437)
T PHA02795 234 IDLVSWLLENG 244 (437)
T ss_pred HHHHHHHHHCC
Confidence 9999999954
No 45
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.85 E-value=2.7e-20 Score=111.67 Aligned_cols=85 Identities=39% Similarity=0.617 Sum_probs=79.3
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHH
Q 030904 41 LAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIV 120 (169)
Q Consensus 41 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~ 120 (169)
||+|+..|+.+++++|++. +.+++. |.+|||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++
T Consensus 1 L~~A~~~~~~~~~~~ll~~-~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 75 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEK-GADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIV 75 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHT-TSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHC-cCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHH
Confidence 7899999999999999997 777765 88999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCc
Q 030904 121 QLLINSASGT 130 (169)
Q Consensus 121 ~~ll~~~~~~ 130 (169)
++|+++|+++
T Consensus 76 ~~Ll~~g~~~ 85 (89)
T PF12796_consen 76 KLLLEHGADV 85 (89)
T ss_dssp HHHHHTTT-T
T ss_pred HHHHHcCCCC
Confidence 9999999987
No 46
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.85 E-value=2.2e-20 Score=124.40 Aligned_cols=119 Identities=14% Similarity=0.103 Sum_probs=101.6
Q ss_pred HHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHH---HHHHHHhCCCCCcccC-CCCCcHHHHHHhcCCHHHHHHHHH
Q 030904 17 DNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHS---LRLALDNLSGSIDEPV-EDGDTALHLTCLYGYLPCVQLLLE 92 (169)
Q Consensus 17 ~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~---~~~ll~~~~~~~~~~~-~~g~~~L~~a~~~~~~~~~~~ll~ 92 (169)
+++++.+.|..++ ..+..|.||||+|+..|+.+. +++|+.. |++++.++ ..|.||||+|+..++.+++++|+.
T Consensus 39 ~~~~l~~~g~~~~--~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~-Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~ 115 (166)
T PHA02743 39 VAPFISGDGHLLH--RYDHHGRQCTHMVAWYDRANAVMKIELLVNM-GADINARELGTGNTLLHIAASTKNYELAEWLCR 115 (166)
T ss_pred HHHHHhhcchhhh--ccCCCCCcHHHHHHHhCccCHHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHh
Confidence 4445667777665 345578899999999988654 7888887 99999998 589999999999999999999995
Q ss_pred -cCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCC
Q 030904 93 -RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGD 145 (169)
Q Consensus 93 -~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~ 145 (169)
.|++++.++..|.||||+|+..++.+++++|+++|+++ +.++..|.
T Consensus 116 ~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~-------~~~~~~~~ 162 (166)
T PHA02743 116 QLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVC-------DDPLSIGL 162 (166)
T ss_pred ccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-------CCcccCCc
Confidence 79999999999999999999999999999999999997 56665554
No 47
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.85 E-value=1.4e-20 Score=145.18 Aligned_cols=146 Identities=27% Similarity=0.327 Sum_probs=117.1
Q ss_pred ChHHHHHHHHh-----cCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCC--------------CcccCCCCCc
Q 030904 13 DSEEDNALFEE-----DGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGS--------------IDEPVEDGDT 73 (169)
Q Consensus 13 ~~~~~~~~l~~-----~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~--------------~~~~~~~g~~ 73 (169)
.+.+..+.++. .+..+++. +..+.+|||.|+..|+.++++.+|+.+... ++..|.+|.|
T Consensus 198 ~s~e~mEi~l~~~g~~r~~~in~~--~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~t 275 (929)
T KOG0510|consen 198 GSKECMEIFLPEHGYERQTHINFD--NNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCT 275 (929)
T ss_pred cchhhhhhhhccccchhhcccccc--cCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCc
Confidence 34444555554 33344443 446678999999999999999999863222 2235788999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHh-cCCCchhhhhhhhcccCCCCCcccchh
Q 030904 74 ALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLIN-SASGTECVKRMLETVDAEGDTDCDDQN 152 (169)
Q Consensus 74 ~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~~~~~g~tpl~~A~ 152 (169)
|||+|++.|+.++++.|+..|++++.++.++.||||.|++.|+.++++.|++ .+... ++..|-.|.||||+|+
T Consensus 276 pLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rl------lne~D~~g~tpLHlaa 349 (929)
T KOG0510|consen 276 PLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRL------LNESDLHGMTPLHLAA 349 (929)
T ss_pred hHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccc------cccccccCCCchhhhh
Confidence 9999999999999999999999999999999999999999999999999998 44443 6889999999999995
Q ss_pred -----hHHHHhhhcccccc
Q 030904 153 -----DLVSLFIMQQEVNT 166 (169)
Q Consensus 153 -----~~~~~li~~~~~~~ 166 (169)
+++++||.+|....
T Consensus 350 ~~gH~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 350 KSGHDRVVQLLLNKGALFL 368 (929)
T ss_pred hcCHHHHHHHHHhcChhhh
Confidence 89999999876543
No 48
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.84 E-value=8.7e-21 Score=152.92 Aligned_cols=143 Identities=29% Similarity=0.428 Sum_probs=121.2
Q ss_pred CCChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH
Q 030904 11 EDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLL 90 (169)
Q Consensus 11 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~l 90 (169)
.......++.+++.++.++.. ...+.+++|.+...+....++.+++. |+.++.++..|+||||.|+.+|+.++|++|
T Consensus 483 q~Gh~~~~~llle~~~~~~~~--~~~~l~~lhla~~~~~v~~~~~l~~~-ga~v~~~~~r~~TpLh~A~~~g~v~~VkfL 559 (1143)
T KOG4177|consen 483 QEGHTEVVQLLLEGGANDNLD--AKKGLTPLHLAADEDTVKVAKILLEH-GANVDLRTGRGYTPLHVAVHYGNVDLVKFL 559 (1143)
T ss_pred ccCCchHHHHhhhcCCccCcc--chhccchhhhhhhhhhHHHHHHHhhc-CCceehhcccccchHHHHHhcCCchHHHHh
Confidence 344556777777777665543 45677888888888888888888888 889999999999999999999999999999
Q ss_pred HHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhccc
Q 030904 91 LERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQQE 163 (169)
Q Consensus 91 l~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~~~ 163 (169)
+++|++++.+++.|+||||.|+..|+.+++++|+++|+++ |..+.+|.|||+.|. +++++++..+.
T Consensus 560 Le~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~v-------na~d~~g~TpL~iA~~lg~~~~~k~l~~~~~ 630 (1143)
T KOG4177|consen 560 LEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASV-------NAADLDGFTPLHIAVRLGYLSVVKLLKVVTA 630 (1143)
T ss_pred hhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCC-------CcccccCcchhHHHHHhcccchhhHHHhccC
Confidence 9999999999999999999999999999999999999998 799999999999995 56666655433
No 49
>PHA02917 ankyrin-like protein; Provisional
Probab=99.83 E-value=9.9e-20 Score=143.46 Aligned_cols=147 Identities=17% Similarity=0.090 Sum_probs=113.8
Q ss_pred CCCChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHc---CCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcC----
Q 030904 10 EEDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQL---GDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYG---- 82 (169)
Q Consensus 10 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~---- 82 (169)
.++..-+.++.++.+|...+ ..+..|.||||+|+.. |+.++++.|++. |++++.++..|+||||+|+..|
T Consensus 7 ~~~~~~~~~~~l~~~~~~~~--~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~-ga~v~~~~~~g~TpL~~Aa~~g~~~v 83 (661)
T PHA02917 7 NEEVALDELKQMLRDRDPND--TRNQFKNNALHAYLFNEHCNNVEVVKLLLDS-GTNPLHKNWRQLTPLEEYTNSRHVKV 83 (661)
T ss_pred hhHHHHHHHHHHHhccCccc--ccCCCCCcHHHHHHHhhhcCcHHHHHHHHHC-CCCccccCCCCCCHHHHHHHcCChhH
Confidence 34444444455555666664 4466788999998665 889999999998 9999999999999999877644
Q ss_pred -------------------------------CHHHHHHHHHcCCCCCccCCCCCChHHHH--HhcChHHHHHHHHhcCCC
Q 030904 83 -------------------------------YLPCVQLLLERGASLEAKDEDGAIPLHDA--CAGGFIEIVQLLINSASG 129 (169)
Q Consensus 83 -------------------------------~~~~~~~ll~~g~~~~~~~~~~~t~l~~a--~~~~~~~~~~~ll~~~~~ 129 (169)
+.+++++|++.|++++.+|..|.||||.+ +..|+.+++++|+++|++
T Consensus 84 ~~~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~ 163 (661)
T PHA02917 84 NKDIAMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCS 163 (661)
T ss_pred HHHHHHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCC
Confidence 45678889999999999999999999954 457899999999999999
Q ss_pred chhhhhhhhcccC--------------CCCCcccchh----------------hHHHHhhh-cccccc
Q 030904 130 TECVKRMLETVDA--------------EGDTDCDDQN----------------DLVSLFIM-QQEVNT 166 (169)
Q Consensus 130 ~~~~~~~~~~~~~--------------~g~tpl~~A~----------------~~~~~li~-~~~~~~ 166 (169)
+ +.++. .+.||||+|+ +++++||+ ..++|.
T Consensus 164 v-------n~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~ 224 (661)
T PHA02917 164 V-------LYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS 224 (661)
T ss_pred c-------cccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc
Confidence 7 44332 2359999884 69999998 445543
No 50
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.82 E-value=1e-19 Score=117.54 Aligned_cols=126 Identities=19% Similarity=0.229 Sum_probs=106.1
Q ss_pred HHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Q 030904 18 NALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASL 97 (169)
Q Consensus 18 ~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~ 97 (169)
++.|++..++- .+.++..++||||.|+..|+.++++.|+.. |++.+.+...||||||-||...+.+++.+|+++|+++
T Consensus 79 V~~lL~e~an~-vNtrD~D~YTpLHRAaYn~h~div~~ll~~-gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDV 156 (228)
T KOG0512|consen 79 VQRLLSEKANH-VNTRDEDEYTPLHRAAYNGHLDIVHELLLS-GANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADV 156 (228)
T ss_pred HHHHHHhcccc-ccccccccccHHHHHHhcCchHHHHHHHHc-cCCcccccccCccchhhhhcccchhHHHHHHhccCcc
Confidence 34444433332 346788899999999999999999999988 9999999999999999999999999999999999999
Q ss_pred CccCCCCCChHHHHHhcChH-HHHHHHH-hcCCCchhhhhhhhcccCCCCCcccchh
Q 030904 98 EAKDEDGAIPLHDACAGGFI-EIVQLLI-NSASGTECVKRMLETVDAEGDTDCDDQN 152 (169)
Q Consensus 98 ~~~~~~~~t~l~~a~~~~~~-~~~~~ll-~~~~~~~~~~~~~~~~~~~g~tpl~~A~ 152 (169)
++......||||.|+...+. ..+++|+ ..+..+ ..++..+.||+..|-
T Consensus 157 nA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~p-------g~~nn~eeta~~iAR 206 (228)
T KOG0512|consen 157 NAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHP-------GLKNNLEETAFDIAR 206 (228)
T ss_pred cccccccchhhHHhhcccchHHHHHHHhhccccCh-------hhhcCccchHHHHHH
Confidence 99999899999999986654 4456554 567776 678899999999994
No 51
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.82 E-value=6.9e-20 Score=147.84 Aligned_cols=138 Identities=27% Similarity=0.371 Sum_probs=122.4
Q ss_pred CCCChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHH
Q 030904 10 EEDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQL 89 (169)
Q Consensus 10 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ 89 (169)
...+.....+.+.+.|++++.. +..++||||.||..|+.+.|++|+++ |++++.++..|+||||.|+.+|+.+++.+
T Consensus 515 ~~~~~v~~~~~l~~~ga~v~~~--~~r~~TpLh~A~~~g~v~~VkfLLe~-gAdv~ak~~~G~TPLH~Aa~~G~~~i~~L 591 (1143)
T KOG4177|consen 515 ADEDTVKVAKILLEHGANVDLR--TGRGYTPLHVAVHYGNVDLVKFLLEH-GADVNAKDKLGYTPLHQAAQQGHNDIAEL 591 (1143)
T ss_pred hhhhhHHHHHHHhhcCCceehh--cccccchHHHHHhcCCchHHHHhhhC-CccccccCCCCCChhhHHHHcChHHHHHH
Confidence 4556677888888999998865 66889999999999999999999999 99999999999999999999999999999
Q ss_pred HHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh
Q 030904 90 LLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN 152 (169)
Q Consensus 90 ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~ 152 (169)
|+++|+++|..|.+|.||||.|++.|+.++++.++..+..+. .......+++|.+|...+.
T Consensus 592 Llk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~--~~~~~~e~~~g~~p~~v~e 652 (1143)
T KOG4177|consen 592 LLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPA--ATDPVKENRKGAVPEDVAE 652 (1143)
T ss_pred HHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCccc--cccchhhhhcccChhhHHH
Confidence 999999999999999999999999999999999999988820 0011567899999988773
No 52
>PHA02730 ankyrin-like protein; Provisional
Probab=99.82 E-value=3.4e-19 Score=138.56 Aligned_cols=149 Identities=15% Similarity=0.034 Sum_probs=120.9
Q ss_pred CCCChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcC---CHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcC--CH
Q 030904 10 EEDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLG---DVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYG--YL 84 (169)
Q Consensus 10 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g---~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~--~~ 84 (169)
+++.+....+++++...+++ ...+..|.||||+|+..| +.++++.|++. |++++.+|..|.||||+|+.++ +.
T Consensus 15 ~~~~~~~~~~~~~~~~~~in-~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~-GAdin~kD~~G~TPLh~Aa~~~~~~~ 92 (672)
T PHA02730 15 DEDVTYKKIKLEIETCHNLS-KHIDRRGNNALHCYVSNKCDTDIKIVRLLLSR-GVERLCRNNEGLTPLGVYSKRKYVKS 92 (672)
T ss_pred cccchHHHHHHHHHHhcchh-hhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhC-CCCCcccCCCCCChHHHHHHcCCCcH
Confidence 45566677788888777776 345567899999999997 49999999988 9999999999999999999876 79
Q ss_pred HHHHHHHHcCC--CCCccCCCCCChHHHHHh--cChHHHHHHHHh-cCCCchhhhhhhhccc-CCCCCcccchh-----h
Q 030904 85 PCVQLLLERGA--SLEAKDEDGAIPLHDACA--GGFIEIVQLLIN-SASGTECVKRMLETVD-AEGDTDCDDQN-----D 153 (169)
Q Consensus 85 ~~~~~ll~~g~--~~~~~~~~~~t~l~~a~~--~~~~~~~~~ll~-~~~~~~~~~~~~~~~~-~~g~tpl~~A~-----~ 153 (169)
+++++|++.|+ +++..+.-+.+|++.++. +++.+++++|++ .+.+++.. .+..+ ..|-+|+++|. +
T Consensus 93 eIv~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~---~~~~~~~~~~~~~yl~~~~~~~e 169 (672)
T PHA02730 93 QIVHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKN---TNYYIHCLGLVDIYVTTPNPRPE 169 (672)
T ss_pred HHHHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhh---hhhhccccchhhhhHhcCCCchH
Confidence 99999999965 457778778999999888 899999999996 66776310 01111 37899999994 9
Q ss_pred HHHHhhhccc
Q 030904 154 LVSLFIMQQE 163 (169)
Q Consensus 154 ~~~~li~~~~ 163 (169)
++++||+.|.
T Consensus 170 IvklLi~~g~ 179 (672)
T PHA02730 170 VLLWLLKSEC 179 (672)
T ss_pred HHHHHHHcCC
Confidence 9999999654
No 53
>PHA02792 ankyrin-like protein; Provisional
Probab=99.81 E-value=6.1e-19 Score=135.97 Aligned_cols=138 Identities=12% Similarity=0.059 Sum_probs=119.1
Q ss_pred ChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCC--CcHHHHHHhcCCH---HHH
Q 030904 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDG--DTALHLTCLYGYL---PCV 87 (169)
Q Consensus 13 ~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g--~~~L~~a~~~~~~---~~~ 87 (169)
...++++++++.|++.. .......++.|+..|+.+++++|++. |++++.++..| .||||+|+..... +++
T Consensus 319 v~ieiIK~LId~Ga~~~----r~~~~n~~~~Aa~~gn~eIVelLIs~-GADIN~kD~~g~~~TpLh~A~~n~~~~v~~Il 393 (631)
T PHA02792 319 VYINVIKCMIDEGATLY----RFKHINKYFQKFDNRDPKVVEYILKN-GNVVVEDDDNIINIMPLFPTLSIHESDVLSIL 393 (631)
T ss_pred ccHHHHHHHHHCCCccc----cCCcchHHHHHHHcCCHHHHHHHHHc-CCchhhhcCCCCChhHHHHHHHhccHhHHHHH
Confidence 45678999999999975 12245568999999999999999998 99999988764 6999987766554 368
Q ss_pred HHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh---------------
Q 030904 88 QLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN--------------- 152 (169)
Q Consensus 88 ~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~--------------- 152 (169)
++++++|++++.+|..|.||||.|+..++.+++++|+++|+++ +.++..|.||++.|.
T Consensus 394 klLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADI-------N~kD~~G~TpL~~A~~~~~~~~~~i~~~~~ 466 (631)
T PHA02792 394 KLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADI-------NITTKYGSTCIGICVILAHACIPEIAELYI 466 (631)
T ss_pred HHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCC-------CCcCCCCCCHHHHHHHHHhcccHHHHHHHH
Confidence 8999999999999999999999999999999999999999998 899999999999983
Q ss_pred hHHHHhhhcc
Q 030904 153 DLVSLFIMQQ 162 (169)
Q Consensus 153 ~~~~~li~~~ 162 (169)
+++++|++++
T Consensus 467 ~il~lLLs~~ 476 (631)
T PHA02792 467 KILEIILSKL 476 (631)
T ss_pred HHHHHHHhcC
Confidence 5688888865
No 54
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.81 E-value=2.1e-19 Score=120.26 Aligned_cols=120 Identities=23% Similarity=0.241 Sum_probs=105.7
Q ss_pred CcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHh
Q 030904 34 TPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACA 113 (169)
Q Consensus 34 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~ 113 (169)
+..+++|+.+++.+.+.+.+..+. ...+|..|..|.|||.||+.+|+.++|++|++.|+++++......++|.+|++
T Consensus 126 s~~p~s~~slsVhql~L~~~~~~~---~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ 202 (296)
T KOG0502|consen 126 SLMPWSPLSLSVHQLHLDVVDLLV---NNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATR 202 (296)
T ss_pred ccccCChhhHHHHHHHHHHHHHHh---hccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhc
Confidence 446677888888777666555444 34688999999999999999999999999999999999999889999999999
Q ss_pred cChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccch-----hhHHHHhhhccc
Q 030904 114 GGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQ-----NDLVSLFIMQQE 163 (169)
Q Consensus 114 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A-----~~~~~~li~~~~ 163 (169)
.|..+++++|+.++.++ |.-|.+|.|||-+| +++++.||..|.
T Consensus 203 ggytdiV~lLL~r~vdV-------NvyDwNGgTpLlyAvrgnhvkcve~Ll~sGA 250 (296)
T KOG0502|consen 203 GGYTDIVELLLTREVDV-------NVYDWNGGTPLLYAVRGNHVKCVESLLNSGA 250 (296)
T ss_pred CChHHHHHHHHhcCCCc-------ceeccCCCceeeeeecCChHHHHHHHHhcCC
Confidence 99999999999999997 89999999999999 499999999553
No 55
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.79 E-value=1.3e-18 Score=129.12 Aligned_cols=136 Identities=25% Similarity=0.373 Sum_probs=117.9
Q ss_pred HHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCC
Q 030904 16 EDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGA 95 (169)
Q Consensus 16 ~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~ 95 (169)
.-+..++..|+.++ ..+..|+|+||.+|.-.+.+++++|++. ++.+|..|..|+||||.|+..++..++.+|++.|+
T Consensus 54 ~ev~~ll~~ga~~~--~~n~DglTalhq~~id~~~e~v~~l~e~-ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA 130 (527)
T KOG0505|consen 54 EEVRKLLNRGASPN--LCNVDGLTALHQACIDDNLEMVKFLVEN-GANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGA 130 (527)
T ss_pred HHHHHHhccCCCcc--ccCCccchhHHHHHhcccHHHHHHHHHh-cCCccccccccCCcchhhcccccHHHHHHHHHhhh
Confidence 34555666676664 4577889999999999999999999998 99999999999999999999999999999999887
Q ss_pred CCCccC-----------------------------------------------------------CCCCChHHHHHhcCh
Q 030904 96 SLEAKD-----------------------------------------------------------EDGAIPLHDACAGGF 116 (169)
Q Consensus 96 ~~~~~~-----------------------------------------------------------~~~~t~l~~a~~~~~ 116 (169)
++...+ ..|-|.||.|+.+|.
T Consensus 131 ~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy 210 (527)
T KOG0505|consen 131 NLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGY 210 (527)
T ss_pred hhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhH
Confidence 644333 236788999999999
Q ss_pred HHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhc
Q 030904 117 IEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQ 161 (169)
Q Consensus 117 ~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~ 161 (169)
.++.++|+++|.++ +.+|.+|+||||.|+ +.+++|++.
T Consensus 211 ~e~~~lLl~ag~~~-------~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ 253 (527)
T KOG0505|consen 211 TEVAALLLQAGYSV-------NIKDYDGWTPLHAAAHWGQEDACELLVEH 253 (527)
T ss_pred HHHHHHHHHhccCc-------ccccccCCCcccHHHHhhhHhHHHHHHHh
Confidence 99999999999998 899999999999985 888888873
No 56
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.79 E-value=2.9e-18 Score=138.92 Aligned_cols=118 Identities=22% Similarity=0.287 Sum_probs=107.2
Q ss_pred CcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHh
Q 030904 34 TPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACA 113 (169)
Q Consensus 34 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~ 113 (169)
++...++|+.||..|+.++++.|++. |++++..|..|.||||+|+..|+.+++++|++.|++++.+|.+|.||||.|+.
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~-G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~ 600 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKA-KLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAIS 600 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHH
Confidence 33456889999999999999999988 99999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhc
Q 030904 114 GGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQ 161 (169)
Q Consensus 114 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~ 161 (169)
.|+.+++++|++.+... + ...+.++||.|+ +++++|++.
T Consensus 601 ~g~~~iv~~L~~~~~~~-------~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~ 644 (823)
T PLN03192 601 AKHHKIFRILYHFASIS-------D--PHAAGDLLCTAAKRNDLTAMKELLKQ 644 (823)
T ss_pred hCCHHHHHHHHhcCccc-------C--cccCchHHHHHHHhCCHHHHHHHHHC
Confidence 99999999999887654 2 356789999995 899999984
No 57
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.78 E-value=2.8e-18 Score=99.76 Aligned_cols=102 Identities=24% Similarity=0.415 Sum_probs=91.7
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHH
Q 030904 41 LAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIV 120 (169)
Q Consensus 41 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~ 120 (169)
+.|+...|.++.++..+.. |.++|.. ..|++|||+|+-+|+.++++||+..|++++.+|..|.|||..|+..||.+++
T Consensus 6 ~~W~vkNG~~DeVk~~v~~-g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNE-GLNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred HhhhhccCcHHHHHHHHHc-cccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence 5688999999999999988 7777765 4899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCchhhhhhhhcccCCCCCcccch
Q 030904 121 QLLINSASGTECVKRMLETVDAEGDTDCDDQ 151 (169)
Q Consensus 121 ~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A 151 (169)
++|++.|++. ..+..+|.+.+..+
T Consensus 84 klLL~~GAdr-------t~~~PdG~~~~eat 107 (117)
T KOG4214|consen 84 KLLLQNGADR-------TIHAPDGTALIEAT 107 (117)
T ss_pred HHHHHcCccc-------ceeCCCchhHHhhc
Confidence 9999999997 56667777766655
No 58
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.77 E-value=1.4e-17 Score=105.26 Aligned_cols=117 Identities=33% Similarity=0.533 Sum_probs=105.6
Q ss_pred CcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHh
Q 030904 34 TPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACA 113 (169)
Q Consensus 34 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~ 113 (169)
+..|.||||+|+..++.+++++|+.. +...+..+..|.+|+|.|+..+..+++++|+..|+.++..+..+.||+|+|+.
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~-~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~ 82 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLEN-GADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR 82 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 35678999999999999999999988 77778889999999999999999999999999999888889999999999999
Q ss_pred cChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHh
Q 030904 114 GGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLF 158 (169)
Q Consensus 114 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~l 158 (169)
.++.+++++|++.+.+. +..+..|.||++.|. +++++|
T Consensus 83 ~~~~~~~~~L~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 83 NGNLDVVKLLLKHGADV-------NARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred cCcHHHHHHHHHcCCCC-------cccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 99999999999998776 678899999999985 555554
No 59
>PHA02741 hypothetical protein; Provisional
Probab=99.77 E-value=6.7e-18 Score=112.85 Aligned_cols=116 Identities=17% Similarity=0.157 Sum_probs=97.1
Q ss_pred CChHHHHHHHHh------cCCCCcccCCCcchhHHHHHHHHcCC----HHHHHHHHHhCCCCCcccCC-CCCcHHHHHHh
Q 030904 12 DDSEEDNALFEE------DGVNMDLESETPPHLRDLAAAAQLGD----VHSLRLALDNLSGSIDEPVE-DGDTALHLTCL 80 (169)
Q Consensus 12 ~~~~~~~~~l~~------~g~~~~~~~~~~~~~t~l~~a~~~g~----~~~~~~ll~~~~~~~~~~~~-~g~~~L~~a~~ 80 (169)
.+..++++++.. .|+++ +..+..|.||||+|+..|+ .+++++|+.. |++++.++. .|.||||+|+.
T Consensus 31 ~g~~~~v~~l~~~~~~~~~ga~i--n~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~-gadin~~~~~~g~TpLh~A~~ 107 (169)
T PHA02741 31 CGCFDIIARFTPFIRGDCHAAAL--NATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL-GADINAQEMLEGDTALHLAAH 107 (169)
T ss_pred cCCHHHHHHHHHHhccchhhhhh--hccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc-CCCCCCCCcCCCCCHHHHHHH
Confidence 344556665532 23444 4556688999999999998 5888999987 999999885 89999999999
Q ss_pred cCCHHHHHHHHH-cCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCc
Q 030904 81 YGYLPCVQLLLE-RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGT 130 (169)
Q Consensus 81 ~~~~~~~~~ll~-~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~ 130 (169)
.++.+++++|+. .|++++..|..|.||||.|+..++.+++++|++.+...
T Consensus 108 ~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 108 RRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred cCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 999999999998 49999999999999999999999999999999876543
No 60
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.77 E-value=5.8e-19 Score=125.76 Aligned_cols=125 Identities=20% Similarity=0.277 Sum_probs=72.8
Q ss_pred CCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhc-----CCHHHHHHHHHcCCCCCcc-CCCCCC
Q 030904 33 ETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLY-----GYLPCVQLLLERGASLEAK-DEDGAI 106 (169)
Q Consensus 33 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~-----~~~~~~~~ll~~g~~~~~~-~~~~~t 106 (169)
.+..|.|+|||++..+++++|+.||+.+-++++.+++.|+||+++++.. .+..+|.-|+..| ++|++ ...|+|
T Consensus 264 aDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQT 342 (452)
T KOG0514|consen 264 ADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQT 342 (452)
T ss_pred hcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhhcch
Confidence 3556667777777777777777777775567777777766666655432 1334444444332 33332 234555
Q ss_pred hHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhccccc
Q 030904 107 PLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQQEVN 165 (169)
Q Consensus 107 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~~~~~ 165 (169)
+|.+|+.+|+.++++.||.+|+++ |++|.+|-|+|.+|+ +|+++|+....-|
T Consensus 343 ALMLAVSHGr~d~vk~LLacgAdV-------NiQDdDGSTALMCA~EHGhkEivklLLA~p~cd 399 (452)
T KOG0514|consen 343 ALMLAVSHGRVDMVKALLACGADV-------NIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCD 399 (452)
T ss_pred hhhhhhhcCcHHHHHHHHHccCCC-------ccccCCccHHHhhhhhhChHHHHHHHhccCccc
Confidence 666666666666666665555554 555555666665553 5555555544433
No 61
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.76 E-value=5.6e-18 Score=136.22 Aligned_cols=126 Identities=19% Similarity=0.187 Sum_probs=107.2
Q ss_pred CcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccC--------------CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCc
Q 030904 34 TPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPV--------------EDGDTALHLTCLYGYLPCVQLLLERGASLEA 99 (169)
Q Consensus 34 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~--------------~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~ 99 (169)
...|.||||.|+..|+.++++.|++. |++++.++ ..|.+|||.|+..++.+++++|++.|++++.
T Consensus 125 ~~~G~TpLhlAa~~~~~eiVklLL~~-GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~ 203 (743)
T TIGR00870 125 FTPGITALHLAAHRQNYEIVKLLLER-GASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILT 203 (743)
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHhC-CCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh
Confidence 34689999999999999999999998 99888653 3589999999999999999999999999999
Q ss_pred cCCCCCChHHHHHhcC---------hHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhh
Q 030904 100 KDEDGAIPLHDACAGG---------FIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIM 160 (169)
Q Consensus 100 ~~~~~~t~l~~a~~~~---------~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~ 160 (169)
+|..|+||||+|+..+ ...+.+++++.+........+.+.+|.+|.||||+|+ ++++++++
T Consensus 204 ~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~ 278 (743)
T TIGR00870 204 ADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLA 278 (743)
T ss_pred HhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHH
Confidence 9999999999999987 2346677777766654444455778999999999995 88888888
No 62
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.75 E-value=3.9e-18 Score=112.36 Aligned_cols=97 Identities=14% Similarity=0.163 Sum_probs=88.5
Q ss_pred CCcchhHHHHHHHHcCCHH---HHHHHHHhCCCCCcccC-CCCCcHHHHHHhcCCHHHHHHHHHc-CCCCCccCCCCCCh
Q 030904 33 ETPPHLRDLAAAAQLGDVH---SLRLALDNLSGSIDEPV-EDGDTALHLTCLYGYLPCVQLLLER-GASLEAKDEDGAIP 107 (169)
Q Consensus 33 ~~~~~~t~l~~a~~~g~~~---~~~~ll~~~~~~~~~~~-~~g~~~L~~a~~~~~~~~~~~ll~~-g~~~~~~~~~~~t~ 107 (169)
.+..|.||||+|+..|+.+ .+++|++. |++++.++ ..|.||||+|+..++.+++++|+.. |++++.++..|.||
T Consensus 51 ~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~-gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tp 129 (154)
T PHA02736 51 YNRHGKQCVHIVSNPDKADPQEKLKLLMEW-GADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTP 129 (154)
T ss_pred hcCCCCEEEEeecccCchhHHHHHHHHHHc-CCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCH
Confidence 4667889999999999864 57888887 99999998 5899999999999999999999984 89999999999999
Q ss_pred HHHHHhcChHHHHHHHHhcCCCc
Q 030904 108 LHDACAGGFIEIVQLLINSASGT 130 (169)
Q Consensus 108 l~~a~~~~~~~~~~~ll~~~~~~ 130 (169)
||+|+..|+.+++++|++.|++.
T Consensus 130 L~~A~~~~~~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 130 YYVACERHDAKMMNILRAKGAQC 152 (154)
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999876
No 63
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.73 E-value=5.3e-17 Score=115.91 Aligned_cols=136 Identities=23% Similarity=0.331 Sum_probs=113.1
Q ss_pred hHHHHHHHHhcCC-CCcccCCCcchhHHHHHHHHc-----CCHHHHHHHHHhCCCCCccc-CCCCCcHHHHHHhcCCHHH
Q 030904 14 SEEDNALFEEDGV-NMDLESETPPHLRDLAAAAQL-----GDVHSLRLALDNLSGSIDEP-VEDGDTALHLTCLYGYLPC 86 (169)
Q Consensus 14 ~~~~~~~l~~~g~-~~~~~~~~~~~~t~l~~a~~~-----g~~~~~~~ll~~~~~~~~~~-~~~g~~~L~~a~~~~~~~~ 86 (169)
.-.+++.|++.|. ++| ..+.-|+||++.++.. .+..+|..|+.- | ++|.+ ...|+|+|++|+.+|+.++
T Consensus 280 NF~VV~~LLDSgvC~VD--~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m-g-nVNaKAsQ~gQTALMLAVSHGr~d~ 355 (452)
T KOG0514|consen 280 NFDVVSILLDSGVCDVD--QQNRAGYTPVMLAALAKLKQPADRTVVERLFKM-G-DVNAKASQHGQTALMLAVSHGRVDM 355 (452)
T ss_pred chHHHHHHhccCccccc--ccccccccHHHHHHHHhhcchhhHHHHHHHHhc-c-CcchhhhhhcchhhhhhhhcCcHHH
Confidence 3457777777665 444 4566899999988863 357889999976 3 56665 4679999999999999999
Q ss_pred HHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhc-CCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhh
Q 030904 87 VQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINS-ASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIM 160 (169)
Q Consensus 87 ~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~ 160 (169)
++.|+.+|+++|.+|.+|.|+|.+|+.+||.+++++||.. +++. ...|.+|-|+|..|. +|..+|..
T Consensus 356 vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~-------sLtD~DgSTAl~IAleagh~eIa~mlYa 428 (452)
T KOG0514|consen 356 VKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDI-------SLTDVDGSTALSIALEAGHREIAVMLYA 428 (452)
T ss_pred HHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccc-------eeecCCCchhhhhHHhcCchHHHHHHHH
Confidence 9999999999999999999999999999999999999964 6776 689999999999993 77766655
No 64
>PHA02792 ankyrin-like protein; Provisional
Probab=99.72 E-value=1.9e-16 Score=122.42 Aligned_cols=133 Identities=13% Similarity=0.216 Sum_probs=111.0
Q ss_pred CChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCH---HHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHH
Q 030904 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDV---HSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQ 88 (169)
Q Consensus 12 ~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~---~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~ 88 (169)
....+++++|++.|++++.......+.||||.|+..... +++++++.. |++++.+|..|.||||+|+..++.++++
T Consensus 349 ~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~-GADIN~kD~~G~TPLh~Aa~~~n~eive 427 (631)
T PHA02792 349 NRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPY-IDDINKIDKHGRSILYYCIESHSVSLVE 427 (631)
T ss_pred cCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhc-CCccccccccCcchHHHHHHcCCHHHHH
Confidence 345678999999999998766656678999988776654 357888887 9999999999999999999999999999
Q ss_pred HHHHcCCCCCccCCCCCChHHHHHh----------cChHHHHHHHHhcCCCchhhhhhhhcccCCCC
Q 030904 89 LLLERGASLEAKDEDGAIPLHDACA----------GGFIEIVQLLINSASGTECVKRMLETVDAEGD 145 (169)
Q Consensus 89 ~ll~~g~~~~~~~~~~~t~l~~a~~----------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~ 145 (169)
+|++.|++++.++..|.||||.|+. ....+++++|++++.++++.+..+......+.
T Consensus 428 lLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~~i~~T~~~~~~~~~ 494 (631)
T PHA02792 428 WLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIECIKKTVDYLSNDRY 494 (631)
T ss_pred HHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHhhccc
Confidence 9999999999999999999999975 22356799999999999887777665444444
No 65
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.71 E-value=6.6e-18 Score=117.55 Aligned_cols=111 Identities=26% Similarity=0.384 Sum_probs=97.9
Q ss_pred HHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHH
Q 030904 45 AQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLI 124 (169)
Q Consensus 45 ~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll 124 (169)
|+.|+.-.++..|+...-+.|.-|..|.+|||||++.|+..+++.|+.+|+.+|..+....||||+|+.+||.+++..|+
T Consensus 8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll 87 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLL 87 (448)
T ss_pred hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHH
Confidence 66666555666666546678888899999999999999999999999999999999998899999999999999999999
Q ss_pred hcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhcc
Q 030904 125 NSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQQ 162 (169)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~~ 162 (169)
+..+++ |..|..|+||||+|+ .+.+-|+.-|
T Consensus 88 ~~kadv-------navnehgntplhyacfwgydqiaedli~~g 123 (448)
T KOG0195|consen 88 SRKADV-------NAVNEHGNTPLHYACFWGYDQIAEDLISCG 123 (448)
T ss_pred HHhccc-------chhhccCCCchhhhhhhcHHHHHHHHHhcc
Confidence 999997 899999999999996 6777787743
No 66
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.70 E-value=7.6e-17 Score=124.96 Aligned_cols=125 Identities=20% Similarity=0.194 Sum_probs=108.9
Q ss_pred cCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCccc-----------------------CCCCCcHHHHHHhcCCHHHH
Q 030904 31 ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEP-----------------------VEDGDTALHLTCLYGYLPCV 87 (169)
Q Consensus 31 ~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~-----------------------~~~g~~~L~~a~~~~~~~~~ 87 (169)
......|.|+||.|+.+.+.++|+.|++. |+|++.+ -..|..||..|+.-++.+++
T Consensus 178 ~~eeY~GqSaLHiAIv~~~~~~V~lLl~~-gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eiv 256 (782)
T KOG3676|consen 178 TSEEYYGQSALHIAIVNRDAELVRLLLAA-GADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIV 256 (782)
T ss_pred hhHhhcCcchHHHHHHhccHHHHHHHHHc-CCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHH
Confidence 34566899999999999999999999998 9998852 12378999999999999999
Q ss_pred HHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhc
Q 030904 88 QLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQ 161 (169)
Q Consensus 88 ~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~ 161 (169)
++|+++|+|++++|.+|+|.||..+..-..++..+++++|++. +...+|.+|.|||-+|+ ++-+.++++
T Consensus 257 rlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~-----l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 257 RLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANA-----LEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred HHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCc-----cccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 9999999999999999999999999998899999999999981 12789999999999997 555555555
No 67
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.70 E-value=1.1e-15 Score=105.81 Aligned_cols=122 Identities=34% Similarity=0.484 Sum_probs=109.7
Q ss_pred CCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCC-----HHHHHHHHHcCC---CCCccCCC
Q 030904 32 SETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGY-----LPCVQLLLERGA---SLEAKDED 103 (169)
Q Consensus 32 ~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~-----~~~~~~ll~~g~---~~~~~~~~ 103 (169)
.......++++.++..+....+++++.. +++++.++..|.||||+|+..++ .+++++|+..|+ ..+.++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~ 146 (235)
T COG0666 68 ARDLDGRLPLHSAASKGDDKIVKLLLAS-GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED 146 (235)
T ss_pred cCCccccCHHHHHHHcCcHHHHHHHHHc-CCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence 3444567899999999999999999988 99999999999999999999999 999999999999 55667999
Q ss_pred CCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhc
Q 030904 104 GAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQ 161 (169)
Q Consensus 104 ~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~ 161 (169)
|.||||+|+..|+.++++.+++.|+++ +.++..|.|+++.|+ ++++.++..
T Consensus 147 g~tpl~~A~~~~~~~~~~~ll~~~~~~-------~~~~~~g~t~l~~a~~~~~~~~~~~l~~~ 202 (235)
T COG0666 147 GNTPLHWAALNGDADIVELLLEAGADP-------NSRNSYGVTALDPAAKNGRIELVKLLLDK 202 (235)
T ss_pred CCchhHHHHHcCchHHHHHHHhcCCCC-------cccccCCCcchhhhcccchHHHHHHHHhc
Confidence 999999999999999999999999998 688999999999994 667777664
No 68
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.70 E-value=2e-16 Score=94.73 Aligned_cols=76 Identities=32% Similarity=0.566 Sum_probs=70.7
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh--
Q 030904 75 LHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-- 152 (169)
Q Consensus 75 L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-- 152 (169)
||+|+..++.+++++|++.+.+++. |.||||+|+..|+.+++++|++.|+++ +.++..|+||||+|+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~-------~~~~~~g~t~L~~A~~~ 69 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADI-------NSQDKNGNTALHYAAEN 69 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCT-------T-BSTTSSBHHHHHHHT
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccc-------cccCCCCCCHHHHHHHc
Confidence 7999999999999999999988777 889999999999999999999999998 789999999999995
Q ss_pred ---hHHHHhhhc
Q 030904 153 ---DLVSLFIMQ 161 (169)
Q Consensus 153 ---~~~~~li~~ 161 (169)
+++++|++.
T Consensus 70 ~~~~~~~~Ll~~ 81 (89)
T PF12796_consen 70 GNLEIVKLLLEH 81 (89)
T ss_dssp THHHHHHHHHHT
T ss_pred CCHHHHHHHHHc
Confidence 999999986
No 69
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.69 E-value=2.4e-16 Score=126.86 Aligned_cols=77 Identities=38% Similarity=0.387 Sum_probs=65.9
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccC--------------CCCCChHHHHHhcChHHHHHHHHhcCCCchhhh
Q 030904 69 EDGDTALHLTCLYGYLPCVQLLLERGASLEAKD--------------EDGAIPLHDACAGGFIEIVQLLINSASGTECVK 134 (169)
Q Consensus 69 ~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~--------------~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 134 (169)
..|.||||+|+..++.+++++|+++|++++.++ ..|.||||.|+..|+.+++++|++.|+++
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi---- 201 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADI---- 201 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcch----
Confidence 358899999999999999999999999888653 25788999999999999999999999887
Q ss_pred hhhhcccCCCCCcccchh
Q 030904 135 RMLETVDAEGDTDCDDQN 152 (169)
Q Consensus 135 ~~~~~~~~~g~tpl~~A~ 152 (169)
+.+|..|+||||+|+
T Consensus 202 ---n~~d~~g~T~Lh~A~ 216 (743)
T TIGR00870 202 ---LTADSLGNTLLHLLV 216 (743)
T ss_pred ---hhHhhhhhHHHHHHH
Confidence 788889999999885
No 70
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.68 E-value=5.8e-16 Score=122.79 Aligned_cols=106 Identities=31% Similarity=0.429 Sum_probs=96.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHH
Q 030904 39 RDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIE 118 (169)
Q Consensus 39 t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~ 118 (169)
..|+.|+..|+.+.++.|++. |++++.+|..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..|+.+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~-Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~ 162 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTG-GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFRE 162 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence 458899999999999999998 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhc-------CCCchhhhhhhhcccCCCCCcccchh
Q 030904 119 IVQLLINS-------ASGTECVKRMLETVDAEGDTDCDDQN 152 (169)
Q Consensus 119 ~~~~ll~~-------~~~~~~~~~~~~~~~~~g~tpl~~A~ 152 (169)
++++|+++ |++. +..+..|.+|+..+.
T Consensus 163 iv~~Ll~~~~~~~~~ga~~-------~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 163 VVQLLSRHSQCHFELGANA-------KPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHhCCCcccccCCCC-------CccccCCCCccchhh
Confidence 99999998 6665 567777777776653
No 71
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.68 E-value=1.5e-16 Score=118.32 Aligned_cols=131 Identities=28% Similarity=0.395 Sum_probs=116.0
Q ss_pred CChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcc-------------------------
Q 030904 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDE------------------------- 66 (169)
Q Consensus 12 ~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~------------------------- 66 (169)
++...++.++.+.|++++-. +..+|||||.|+..|+..++++|+.. |++...
T Consensus 83 d~~~e~v~~l~e~ga~Vn~~--d~e~wtPlhaaascg~~~i~~~li~~-gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~ 159 (527)
T KOG0505|consen 83 DDNLEMVKFLVENGANVNAQ--DNEGWTPLHAAASCGYLNIVEYLIQH-GANLLAVNSDGNMPYDLAEDEATLDVLETEM 159 (527)
T ss_pred cccHHHHHHHHHhcCCcccc--ccccCCcchhhcccccHHHHHHHHHh-hhhhhhccCCCCCccccccCcchhHHHHHHH
Confidence 56778999999999999754 56889999999999999999999976 443221
Q ss_pred ----------------------------------cCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHH
Q 030904 67 ----------------------------------PVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDAC 112 (169)
Q Consensus 67 ----------------------------------~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~ 112 (169)
++..|-|.||+|+..|..++..+|++.|.+++.+|.+|+||||.|+
T Consensus 160 ~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA 239 (527)
T KOG0505|consen 160 ARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAA 239 (527)
T ss_pred HHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHH
Confidence 2333789999999999999999999999999999999999999999
Q ss_pred hcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh
Q 030904 113 AGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN 152 (169)
Q Consensus 113 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~ 152 (169)
.=|..++.++|+++|++. +.....|+||+.+|.
T Consensus 240 ~Wg~~~~~elL~~~ga~~-------d~~t~~g~~p~dv~d 272 (527)
T KOG0505|consen 240 HWGQEDACELLVEHGADM-------DAKTKMGETPLDVAD 272 (527)
T ss_pred HhhhHhHHHHHHHhhccc-------chhhhcCCCCccchh
Confidence 999999999999999998 688999999999995
No 72
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.67 E-value=1.5e-16 Score=122.52 Aligned_cols=122 Identities=24% Similarity=0.278 Sum_probs=113.1
Q ss_pred CCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHH
Q 030904 32 SETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDA 111 (169)
Q Consensus 32 ~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a 111 (169)
-.+..++|.||.|+.+|+.++.+.|++. .+.++..+..|.+|||+|+..|+.++++.++..+...++.+..|.||||.|
T Consensus 44 ~qd~~gfTalhha~Lng~~~is~llle~-ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhla 122 (854)
T KOG0507|consen 44 LQDYSGFTLLHHAVLNGQNQISKLLLDY-EALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLA 122 (854)
T ss_pred ccCccchhHHHHHHhcCchHHHHHHhcc-hhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchh
Confidence 3466899999999999999999999988 888888999999999999999999999999999988999999999999999
Q ss_pred HhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhc
Q 030904 112 CAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQ 161 (169)
Q Consensus 112 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~ 161 (169)
+++||.+++.+|+.+|+++ -++|..++|++.+|+ +++.+|+++
T Consensus 123 aqhgh~dvv~~Ll~~~adp-------~i~nns~~t~ldlA~qfgr~~Vvq~ll~~ 170 (854)
T KOG0507|consen 123 AQHGHLEVVFYLLKKNADP-------FIRNNSKETVLDLASRFGRAEVVQMLLQK 170 (854)
T ss_pred hhhcchHHHHHHHhcCCCc-------cccCcccccHHHHHHHhhhhHHHHHHhhh
Confidence 9999999999999999999 688999999999995 677777775
No 73
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.65 E-value=7.2e-16 Score=114.79 Aligned_cols=106 Identities=25% Similarity=0.343 Sum_probs=96.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHH
Q 030904 39 RDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIE 118 (169)
Q Consensus 39 t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~ 118 (169)
..|.-|+..|.+++|+..+.+ -.|+...+..|.|+||.|+..||.++|+||++.|+++|+.|.+|+||||+|+..++..
T Consensus 552 aLLLDaaLeGEldlVq~~i~e-v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~ 630 (752)
T KOG0515|consen 552 ALLLDAALEGELDLVQRIIYE-VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVP 630 (752)
T ss_pred HHHHhhhhcchHHHHHHHHHh-hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchH
Confidence 446789999999999999987 6688888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhhhhhhhcccCCCCCcccch
Q 030904 119 IVQLLINSASGTECVKRMLETVDAEGDTDCDDQ 151 (169)
Q Consensus 119 ~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A 151 (169)
+++.|++.|+.+ |..+=.++.|+..-+
T Consensus 631 ~ckqLVe~Gaav------fAsTlSDmeTa~eKC 657 (752)
T KOG0515|consen 631 MCKQLVESGAAV------FASTLSDMETAAEKC 657 (752)
T ss_pred HHHHHHhccceE------Eeeecccccchhhhc
Confidence 999999999988 566667778877655
No 74
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.62 E-value=1.9e-15 Score=82.00 Aligned_cols=54 Identities=50% Similarity=0.773 Sum_probs=40.4
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHH
Q 030904 71 GDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLI 124 (169)
Q Consensus 71 g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll 124 (169)
|.||||+|+..|+.+++++|++.|.+++.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 578888888888888888888888888888888888888888888888888875
No 75
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.60 E-value=5.1e-16 Score=84.71 Aligned_cols=50 Identities=42% Similarity=0.648 Sum_probs=20.9
Q ss_pred CCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHH
Q 030904 62 GSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDA 111 (169)
Q Consensus 62 ~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a 111 (169)
.+++.+|..|.||||+|+.+|+.+++++|++.|++++.+|..|+||+|+|
T Consensus 7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp --TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 55555666666666666666666666666655666666666666666654
No 76
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.60 E-value=4.1e-15 Score=86.64 Aligned_cols=95 Identities=24% Similarity=0.311 Sum_probs=80.1
Q ss_pred CChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHH
Q 030904 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLL 91 (169)
Q Consensus 12 ~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll 91 (169)
++-+++.+.+.+ |.+++- ..-+.+|||+|+..|..+++++|+.. |++++.+|+.|.|||..|+..||.+||++|+
T Consensus 13 G~~DeVk~~v~~-g~nVn~---~~ggR~plhyAAD~GQl~ilefli~i-GA~i~~kDKygITPLLsAvwEGH~~cVklLL 87 (117)
T KOG4214|consen 13 GEIDEVKQSVNE-GLNVNE---IYGGRTPLHYAADYGQLSILEFLISI-GANIQDKDKYGITPLLSAVWEGHRDCVKLLL 87 (117)
T ss_pred CcHHHHHHHHHc-cccHHH---HhCCcccchHhhhcchHHHHHHHHHh-ccccCCccccCCcHHHHHHHHhhHHHHHHHH
Confidence 444555555554 577653 33677999999999999999999998 9999999999999999999999999999999
Q ss_pred HcCCCCCccCCCCCChHHHH
Q 030904 92 ERGASLEAKDEDGAIPLHDA 111 (169)
Q Consensus 92 ~~g~~~~~~~~~~~t~l~~a 111 (169)
+.|++...+..+|.+.+..+
T Consensus 88 ~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 88 QNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred HcCcccceeCCCchhHHhhc
Confidence 99999988888887765544
No 77
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.59 E-value=1.9e-15 Score=82.43 Aligned_cols=55 Identities=36% Similarity=0.548 Sum_probs=29.4
Q ss_pred HHHcC-CCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccch
Q 030904 90 LLERG-ASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQ 151 (169)
Q Consensus 90 ll~~g-~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A 151 (169)
|++.| ++++.+|..|.||||+|++.|+.+++++|++.|+++ +.+|..|+||+|+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~-------~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADP-------NAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--T-------T---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCC-------CCCcCCCCCHHHhC
Confidence 45666 778888888888888888888888888888888887 78888888888876
No 78
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.57 E-value=9.8e-15 Score=112.68 Aligned_cols=145 Identities=17% Similarity=0.123 Sum_probs=113.0
Q ss_pred hHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 030904 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (169)
Q Consensus 14 ~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~ 93 (169)
...++.++++..+-+++.+ ..|.+|||+|+..|+.+.++.++.+ +...|.....|.+|||.++.+|+.+++.+|+++
T Consensus 61 ~~~is~llle~ea~ldl~d--~kg~~plhlaaw~g~~e~vkmll~q-~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~ 137 (854)
T KOG0507|consen 61 QNQISKLLLDYEALLDLCD--TKGILPLHLAAWNGNLEIVKMLLLQ-TDILNAVNIENETPLHLAAQHGHLEVVFYLLKK 137 (854)
T ss_pred chHHHHHHhcchhhhhhhh--ccCcceEEehhhcCcchHHHHHHhc-ccCCCcccccCcCccchhhhhcchHHHHHHHhc
Confidence 3457788888878777654 5777899999999999999999888 677888888999999999999999999999999
Q ss_pred CCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhh-hhhhcccCCCCCcccchh-----hHHHHhhhc
Q 030904 94 GASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVK-RMLETVDAEGDTDCDDQN-----DLVSLFIMQ 161 (169)
Q Consensus 94 g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~~~~~~g~tpl~~A~-----~~~~~li~~ 161 (169)
|++.-.++..+.|++..|++.|..+++++|++......... .--..++-.+.+|+|+|+ ++++.|++.
T Consensus 138 ~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~a 211 (854)
T KOG0507|consen 138 NADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEA 211 (854)
T ss_pred CCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhc
Confidence 99988889999999999999999999988887632211000 001245566788888884 777777773
No 79
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.55 E-value=1.1e-13 Score=95.74 Aligned_cols=111 Identities=29% Similarity=0.407 Sum_probs=99.7
Q ss_pred hHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCC-----HHHHHHHHHhCCC---CCcccCCCCCcHHHHHHhcCCHH
Q 030904 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGD-----VHSLRLALDNLSG---SIDEPVEDGDTALHLTCLYGYLP 85 (169)
Q Consensus 14 ~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~-----~~~~~~ll~~~~~---~~~~~~~~g~~~L~~a~~~~~~~ 85 (169)
...++..+...|.+++. .+..|.||||+|+..++ .++++.|++. ++ ..+.++..|.||||+|+..++.+
T Consensus 85 ~~~~~~~l~~~~~~~~~--~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~-g~~~~~~~~~~~~g~tpl~~A~~~~~~~ 161 (235)
T COG0666 85 DDKIVKLLLASGADVNA--KDADGDTPLHLAALNGNPPEGNIEVAKLLLEA-GADLDVNNLRDEDGNTPLHWAALNGDAD 161 (235)
T ss_pred cHHHHHHHHHcCCCccc--ccCCCCcHHHHHHhcCCcccchHHHHHHHHHc-CCCCCCccccCCCCCchhHHHHHcCchH
Confidence 44455778888888854 46688899999999999 9999999998 77 66667999999999999999999
Q ss_pred HHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcC
Q 030904 86 CVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSA 127 (169)
Q Consensus 86 ~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~ 127 (169)
++++++..|++++.++..|.|++++|+..++.+++..+++.+
T Consensus 162 ~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 162 IVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred HHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999865
No 80
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.53 E-value=4.1e-13 Score=84.57 Aligned_cols=109 Identities=34% Similarity=0.555 Sum_probs=96.4
Q ss_pred ChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 030904 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (169)
Q Consensus 13 ~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~ 92 (169)
.....++.+.+.+.+.+ ..+..|.+|+|.|+..++.+++++|+.. ++.++..+..+.+|+|+|+..++.+++++|+.
T Consensus 18 ~~~~~i~~li~~~~~~~--~~~~~g~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~ 94 (126)
T cd00204 18 GHLEVVKLLLENGADVN--AKDNDGRTPLHLAAKNGHLEIVKLLLEK-GADVNARDKDGNTPLHLAARNGNLDVVKLLLK 94 (126)
T ss_pred CcHHHHHHHHHcCCCCC--ccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 44578888888888763 3455777999999999999999999998 77888888899999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhcChHHHHHHHH
Q 030904 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLI 124 (169)
Q Consensus 93 ~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll 124 (169)
.+.+++..+..+.||++.|...++.+++++|+
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 95 HGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred cCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 99999999999999999999999999998873
No 81
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.53 E-value=3e-14 Score=77.17 Aligned_cols=54 Identities=31% Similarity=0.460 Sum_probs=45.6
Q ss_pred hhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHH
Q 030904 37 HLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLL 91 (169)
Q Consensus 37 ~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll 91 (169)
|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~-~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEH-GADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHT-TSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 46899999999999999999998 9999999999999999999999999999986
No 82
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.48 E-value=5.5e-13 Score=93.07 Aligned_cols=112 Identities=24% Similarity=0.291 Sum_probs=92.4
Q ss_pred CCChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCccc-CCCCCcHHHHHHhcCCHHHHHH
Q 030904 11 EDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEP-VEDGDTALHLTCLYGYLPCVQL 89 (169)
Q Consensus 11 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~~g~~~L~~a~~~~~~~~~~~ 89 (169)
+.+.+....++... - +.+..++.|.++|..|+.+|+.++++.|++. |+|+|.. +..++||||.|+..|+.+++.+
T Consensus 22 Kndt~~a~~LLs~v-r--~vn~~D~sGMs~LahAaykGnl~~v~lll~~-gaDvN~~qhg~~YTpLmFAALSGn~dvcrl 97 (396)
T KOG1710|consen 22 KNDTEAALALLSTV-R--QVNQRDPSGMSVLAHAAYKGNLTLVELLLEL-GADVNDKQHGTLYTPLMFAALSGNQDVCRL 97 (396)
T ss_pred cCcHHHHHHHHHHh-h--hhhccCCCcccHHHHHHhcCcHHHHHHHHHh-CCCcCcccccccccHHHHHHHcCCchHHHH
Confidence 45555555555441 1 2334577888999999999999999999998 9998864 6788999999999999999999
Q ss_pred HHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhc
Q 030904 90 LLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINS 126 (169)
Q Consensus 90 ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~ 126 (169)
|++.|+.....+.-|+|+-..|+.-|+.+++..+-.+
T Consensus 98 lldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 98 LLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred HHhccCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 9999999999999999999999999999988877543
No 83
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.46 E-value=3.8e-13 Score=93.82 Aligned_cols=106 Identities=23% Similarity=0.270 Sum_probs=97.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCc-cCCCCCChHHHHHhcChH
Q 030904 39 RDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEA-KDEDGAIPLHDACAGGFI 117 (169)
Q Consensus 39 t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~~t~l~~a~~~~~~ 117 (169)
.||..+..+++.+....||.. .-.+|.+|..|.++|..|+..|+.+++++|++.|+|+|. ++..+.|||+.|+-.|+.
T Consensus 14 ~~Lle~i~Kndt~~a~~LLs~-vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~ 92 (396)
T KOG1710|consen 14 SPLLEAIDKNDTEAALALLST-VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQ 92 (396)
T ss_pred hHHHHHHccCcHHHHHHHHHH-hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCc
Confidence 679999999999999999987 556899999999999999999999999999999999986 456789999999999999
Q ss_pred HHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh
Q 030904 118 EIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN 152 (169)
Q Consensus 118 ~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~ 152 (169)
++.+.|++.|+.+ ...|.-|+|+-..|+
T Consensus 93 dvcrllldaGa~~-------~~vNsvgrTAaqmAA 120 (396)
T KOG1710|consen 93 DVCRLLLDAGARM-------YLVNSVGRTAAQMAA 120 (396)
T ss_pred hHHHHHHhccCcc-------ccccchhhhHHHHHH
Confidence 9999999999998 678888999998874
No 84
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.41 E-value=9.1e-13 Score=104.78 Aligned_cols=81 Identities=28% Similarity=0.474 Sum_probs=76.7
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-
Q 030904 74 ALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN- 152 (169)
Q Consensus 74 ~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~- 152 (169)
.|+.|+..|+.+.+++|+..|++++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadv-------n~~d~~G~TpLh~A~~ 157 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADP-------TLLDKDGKTPLELAEE 157 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-------CCCCCCCCCHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999998 799999999999995
Q ss_pred ----hHHHHhhhc
Q 030904 153 ----DLVSLFIMQ 161 (169)
Q Consensus 153 ----~~~~~li~~ 161 (169)
+++++|+..
T Consensus 158 ~g~~~iv~~Ll~~ 170 (664)
T PTZ00322 158 NGFREVVQLLSRH 170 (664)
T ss_pred CCcHHHHHHHHhC
Confidence 899999876
No 85
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.40 E-value=2.1e-12 Score=100.79 Aligned_cols=114 Identities=22% Similarity=0.228 Sum_probs=102.2
Q ss_pred CChHHHHHHHHhcCCCCcc---------cC---C---------CcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCC
Q 030904 12 DDSEEDNALFEEDGVNMDL---------ES---E---------TPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVED 70 (169)
Q Consensus 12 ~~~~~~~~~l~~~g~~~~~---------~~---~---------~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~ 70 (169)
..+-+.+.+|++.|++++. .+ . -+.|-.||..||..++.++++.|+++ |++++.+|..
T Consensus 194 ~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~-gAd~~aqDS~ 272 (782)
T KOG3676|consen 194 NRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH-GADPNAQDSN 272 (782)
T ss_pred hccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc-CCCCCccccC
Confidence 3456688999999999863 11 1 34677899999999999999999998 9999999999
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCC--CCccCCCCCChHHHHHhcChHHHHHHHHhc
Q 030904 71 GDTALHLTCLYGYLPCVQLLLERGAS--LEAKDEDGAIPLHDACAGGFIEIVQLLINS 126 (169)
Q Consensus 71 g~~~L~~a~~~~~~~~~~~ll~~g~~--~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~ 126 (169)
|+|.||..+.+-..++.+++++.|++ ...+|+.|-|||.+|++.|..++.+.+++.
T Consensus 273 GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 273 GNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred CChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 99999999999889999999999999 889999999999999999999999999987
No 86
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.37 E-value=1.5e-12 Score=104.82 Aligned_cols=142 Identities=23% Similarity=0.302 Sum_probs=117.6
Q ss_pred CCChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCccc-CCCCCcHHHHHHhcCCHHHHHH
Q 030904 11 EDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEP-VEDGDTALHLTCLYGYLPCVQL 89 (169)
Q Consensus 11 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~~g~~~L~~a~~~~~~~~~~~ 89 (169)
++...+++++++..|+++. -+++.|++||..|+..|+...++.|+.+ .+++... |+.+.|+|.+||..|+.+++++
T Consensus 766 aggh~e~vellv~rganie--hrdkkgf~plImaatagh~tvV~~llk~-ha~veaQsdrtkdt~lSlacsggr~~vvel 842 (2131)
T KOG4369|consen 766 AGGHREEVELLVVRGANIE--HRDKKGFVPLIMAATAGHITVVQDLLKA-HADVEAQSDRTKDTMLSLACSGGRTRVVEL 842 (2131)
T ss_pred cCccHHHHHHHHHhccccc--ccccccchhhhhhcccCchHHHHHHHhh-hhhhhhhcccccCceEEEecCCCcchHHHH
Confidence 5677889999999999875 4577889999999999999999999987 7777654 6788999999999999999999
Q ss_pred HHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhh
Q 030904 90 LLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIM 160 (169)
Q Consensus 90 ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~ 160 (169)
|+..|++-..++-...|||.+|...|..+++++|+..|..+.. ..-.+.|-.||.+|. +.+..|++
T Consensus 843 Ll~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInS-----rtgSklgisPLmlatmngh~~at~~ll~ 913 (2131)
T KOG4369|consen 843 LLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINS-----RTGSKLGISPLMLATMNGHQAATLSLLQ 913 (2131)
T ss_pred HHHhhccccccchhhcCchhhhcCcchHHHHHHHhhccccccc-----ccccccCcchhhhhhhccccHHHHHHhc
Confidence 9999999988888899999999999999999999999977621 223466777777774 55556665
No 87
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35 E-value=3.6e-12 Score=95.44 Aligned_cols=93 Identities=19% Similarity=0.267 Sum_probs=80.9
Q ss_pred cCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccC-CCCCChHH
Q 030904 31 ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKD-EDGAIPLH 109 (169)
Q Consensus 31 ~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~-~~~~t~l~ 109 (169)
...+..|.|+||.|+..|+.++|+||++. |+++|..|.+||||||.|+.+.+..+++.|.+.|+.+-+.. .++.|+..
T Consensus 577 SqpNdEGITaLHNAiCaghyeIVkFLi~~-ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~e 655 (752)
T KOG0515|consen 577 SQPNDEGITALHNAICAGHYEIVKFLIEF-GANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAE 655 (752)
T ss_pred CCCCccchhHHhhhhhcchhHHHHHHHhc-CCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhh
Confidence 34577899999999999999999999998 99999999999999999999999999999999999886654 46778875
Q ss_pred HH--HhcChHHHHHHHH
Q 030904 110 DA--CAGGFIEIVQLLI 124 (169)
Q Consensus 110 ~a--~~~~~~~~~~~ll 124 (169)
-+ ...|..+|.++|-
T Consensus 656 KCee~eeGY~~CsqyL~ 672 (752)
T KOG0515|consen 656 KCEEMEEGYDQCSQYLY 672 (752)
T ss_pred hcchhhhhHHHHHHHHH
Confidence 54 3577888888875
No 88
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.33 E-value=2.3e-12 Score=103.71 Aligned_cols=152 Identities=19% Similarity=0.281 Sum_probs=120.6
Q ss_pred CCCCCChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccC-CCCCcHHHHHHhcCCHHH
Q 030904 8 MMEEDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPV-EDGDTALHLTCLYGYLPC 86 (169)
Q Consensus 8 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~~g~~~L~~a~~~~~~~~ 86 (169)
+.+.+...++++.++..|.+++.......|..||..|...|+.+.++.||+. |.++|..- -..+|.|.+|+..|+.++
T Consensus 863 la~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~-gsdiNaqIeTNrnTaltla~fqgr~ev 941 (2131)
T KOG4369|consen 863 LARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQP-GSDINAQIETNRNTALTLALFQGRPEV 941 (2131)
T ss_pred hhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcc-cchhccccccccccceeeccccCcchH
Confidence 3456778888999999998888877888888999999999999999999988 77777542 345688888888888888
Q ss_pred HHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCch----------------------hhhhh------hh
Q 030904 87 VQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTE----------------------CVKRM------LE 138 (169)
Q Consensus 87 ~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~----------------------~~~~~------~~ 138 (169)
+.+|+.+.+++..+...|-|||.-++..|.+++-+.|+..|++.+ .+..+ ++
T Consensus 942 v~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~ 1021 (2131)
T KOG4369|consen 942 VFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVR 1021 (2131)
T ss_pred HHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCcccee
Confidence 888888888888888888888888888888888888888888763 11222 35
Q ss_pred cccCCCCCcccchh-----hHHHHhhh
Q 030904 139 TVDAEGDTDCDDQN-----DLVSLFIM 160 (169)
Q Consensus 139 ~~~~~g~tpl~~A~-----~~~~~li~ 160 (169)
++|.+|.|+|.+|+ ..+..|++
T Consensus 1022 v~NkkG~T~Lwla~~Gg~lss~~il~~ 1048 (2131)
T KOG4369|consen 1022 VPNKKGCTVLWLASAGGALSSCPILVS 1048 (2131)
T ss_pred cccCCCCcccchhccCCccccchHHhh
Confidence 78899999999884 55555655
No 89
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.20 E-value=3.5e-11 Score=89.10 Aligned_cols=92 Identities=28% Similarity=0.313 Sum_probs=84.7
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCCCccCCCCCChHHHHHh
Q 030904 35 PPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER-GASLEAKDEDGAIPLHDACA 113 (169)
Q Consensus 35 ~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~-g~~~~~~~~~~~t~l~~a~~ 113 (169)
..+.-++.+|+..|+.+.++.+.-. +.+.+.+|.+.+|+||+|+..|+.++++||++. +.+.+.+|+||+|||.-|..
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~-g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~ 582 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQ-GMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH 582 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHh-cccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence 3456678999999999999998888 999999999999999999999999999999987 78999999999999999999
Q ss_pred cChHHHHHHHHhcC
Q 030904 114 GGFIEIVQLLINSA 127 (169)
Q Consensus 114 ~~~~~~~~~ll~~~ 127 (169)
++|.+++++|-+.-
T Consensus 583 F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 583 FKHKEVVKLLEEAQ 596 (622)
T ss_pred cCcHHHHHHHHHHh
Confidence 99999999987653
No 90
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.19 E-value=4.6e-10 Score=83.72 Aligned_cols=87 Identities=25% Similarity=0.355 Sum_probs=79.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCCCcccC-CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChH
Q 030904 39 RDLAAAAQLGDVHSLRLALDNLSGSIDEPV-EDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFI 117 (169)
Q Consensus 39 t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~ 117 (169)
..||.+++.|+.+.+-.||.. |+++|..+ ..|.||||.|++.|+..-+++|+-+|+++.+.|.+|.||+.+|-..||.
T Consensus 135 rQLhasvRt~nlet~LRll~l-GA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~ 213 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSL-GAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHH 213 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHc-ccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCch
Confidence 459999999999999999988 99999887 4599999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 030904 118 EIVQLLINS 126 (169)
Q Consensus 118 ~~~~~ll~~ 126 (169)
++.+.|++.
T Consensus 214 ~laeRl~e~ 222 (669)
T KOG0818|consen 214 ELAERLVEI 222 (669)
T ss_pred HHHHHHHHH
Confidence 888777653
No 91
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.15 E-value=2.4e-11 Score=95.33 Aligned_cols=95 Identities=28% Similarity=0.326 Sum_probs=83.8
Q ss_pred HHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccC-CCCCcHHHHHHhcCCHHHHHHHHHcCC
Q 030904 17 DNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPV-EDGDTALHLTCLYGYLPCVQLLLERGA 95 (169)
Q Consensus 17 ~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~~g~~~L~~a~~~~~~~~~~~ll~~g~ 95 (169)
+..++.+.+.+. .+..+..|.++||.++..+..+++++||++ |+++..+| ..|+||||.|..+|+.+++..|+.+|+
T Consensus 33 lk~F~~k~c~n~-anikD~~GR~alH~~~S~~k~~~l~wLlqh-Gidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~ 110 (1267)
T KOG0783|consen 33 LKGFSEKSCQNL-ANIKDRYGRTALHIAVSENKNSFLRWLLQH-GIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGR 110 (1267)
T ss_pred HHHHHHHhhhhh-hhHHHhhccceeeeeeccchhHHHHHHHhc-CceeeeccccccchHhhHhhhhchHHHHHHHHhcCC
Confidence 566777777776 455677899999999999999999999998 99999988 569999999999999999999999999
Q ss_pred CCCccCCCCCChHHHHHh
Q 030904 96 SLEAKDEDGAIPLHDACA 113 (169)
Q Consensus 96 ~~~~~~~~~~t~l~~a~~ 113 (169)
....+|..|.+||...++
T Consensus 111 SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 111 SLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred ceEEecccCCCHHHHHhh
Confidence 999999999999988776
No 92
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.07 E-value=7.9e-11 Score=92.57 Aligned_cols=83 Identities=25% Similarity=0.267 Sum_probs=76.9
Q ss_pred CCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCC-CCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhccc
Q 030904 63 SIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDE-DGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVD 141 (169)
Q Consensus 63 ~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~-~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 141 (169)
-+|.+|..|+++||+++..+..++++||+++|+++..+|. .|+||||.|...|+++++-.|+.+|... .++|
T Consensus 44 ~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL-------~i~D 116 (1267)
T KOG0783|consen 44 LANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSL-------RIKD 116 (1267)
T ss_pred hhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCce-------EEec
Confidence 4788899999999999999999999999999999999885 7999999999999999999999999887 7999
Q ss_pred CCCCCcccchh
Q 030904 142 AEGDTDCDDQN 152 (169)
Q Consensus 142 ~~g~tpl~~A~ 152 (169)
+.|.+||..-+
T Consensus 117 keglsplq~~~ 127 (1267)
T KOG0783|consen 117 KEGLSPLQFLS 127 (1267)
T ss_pred ccCCCHHHHHh
Confidence 99999998653
No 93
>PF13606 Ank_3: Ankyrin repeat
Probab=98.95 E-value=1.6e-09 Score=50.96 Aligned_cols=28 Identities=43% Similarity=0.701 Sum_probs=13.3
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCCC
Q 030904 71 GDTALHLTCLYGYLPCVQLLLERGASLE 98 (169)
Q Consensus 71 g~~~L~~a~~~~~~~~~~~ll~~g~~~~ 98 (169)
|+||||+|+..|+.+++++|+++|++++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 4444444444444444444444444443
No 94
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.93 E-value=2.6e-09 Score=51.53 Aligned_cols=31 Identities=42% Similarity=0.659 Sum_probs=19.2
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCCCccC
Q 030904 71 GDTALHLTCLYGYLPCVQLLLERGASLEAKD 101 (169)
Q Consensus 71 g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~ 101 (169)
|.||||+|+..++.+++++|+++|++++.+|
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 5566666666666666666666666665554
No 95
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.88 E-value=2.9e-09 Score=79.21 Aligned_cols=77 Identities=30% Similarity=0.406 Sum_probs=70.1
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHh-cCCCchhhhhhhhcccCCCCCc
Q 030904 69 EDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLIN-SASGTECVKRMLETVDAEGDTD 147 (169)
Q Consensus 69 ~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~~~~~g~tp 147 (169)
..+..++++|++.|....++-+.-.|.+++.+|.+.+|+||.|+..|+.+++++|++ .+.++ +.+|++|+||
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~-------~~kDRw~rtP 576 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDP-------DPKDRWGRTP 576 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCC-------ChhhccCCCc
Confidence 445678999999999999998888999999999999999999999999999999997 56777 7999999999
Q ss_pred ccchh
Q 030904 148 CDDQN 152 (169)
Q Consensus 148 l~~A~ 152 (169)
|.-|.
T Consensus 577 lDdA~ 581 (622)
T KOG0506|consen 577 LDDAK 581 (622)
T ss_pred chHhH
Confidence 99994
No 96
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.87 E-value=2.7e-08 Score=75.76 Aligned_cols=97 Identities=29% Similarity=0.379 Sum_probs=80.9
Q ss_pred CcchhHHHHHHHHcCCHHHHHHHHHhCCCC--Cc--ccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHH
Q 030904 34 TPPHLRDLAAAAQLGDVHSLRLALDNLSGS--ID--EPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLH 109 (169)
Q Consensus 34 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~--~~--~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~ 109 (169)
.+.|. .|..|....+...+-.||.+ |.. ++ .-+.+|+|+||+|++.|+..+.++|+=+|+|+.++|..|+|+|.
T Consensus 622 ~~lgq-qLl~A~~~~Dl~t~~lLLAh-g~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~ 699 (749)
T KOG0705|consen 622 EPLGQ-QLLRAVAAEDLQTAILLLAH-GSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALF 699 (749)
T ss_pred CchHH-HHHHHHHHHHHHHHHHHHhc-cCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhh
Confidence 34453 46667777788888888877 432 22 23577899999999999999999999999999999999999999
Q ss_pred HHHhcChHHHHHHHHhcCCCchh
Q 030904 110 DACAGGFIEIVQLLINSASGTEC 132 (169)
Q Consensus 110 ~a~~~~~~~~~~~ll~~~~~~~~ 132 (169)
+|-+.|..+++.+|+++|+..++
T Consensus 700 yar~a~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 700 YARQAGSQECIDVLLQYGCPDEC 722 (749)
T ss_pred hHhhcccHHHHHHHHHcCCCccc
Confidence 99999999999999999988753
No 97
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.86 E-value=1e-08 Score=77.15 Aligned_cols=88 Identities=31% Similarity=0.405 Sum_probs=75.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHh-CCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChH
Q 030904 39 RDLAAAAQLGDVHSLRLALDN-LSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFI 117 (169)
Q Consensus 39 t~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~ 117 (169)
.|+|++......+.+...+.. -...++.+|..|.||||.|+.-|+...+..|+..|+++..+++.|++|||-|+..|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 458889888887777665544 2446788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 030904 118 EIVQLLINS 126 (169)
Q Consensus 118 ~~~~~ll~~ 126 (169)
+++..++.+
T Consensus 102 q~i~~vlr~ 110 (560)
T KOG0522|consen 102 QIITEVLRH 110 (560)
T ss_pred HHHHHHHHH
Confidence 888777654
No 98
>PF13606 Ank_3: Ankyrin repeat
Probab=98.86 E-value=4.1e-09 Score=49.53 Aligned_cols=28 Identities=39% Similarity=0.656 Sum_probs=26.6
Q ss_pred CCCChHHHHHhcChHHHHHHHHhcCCCc
Q 030904 103 DGAIPLHDACAGGFIEIVQLLINSASGT 130 (169)
Q Consensus 103 ~~~t~l~~a~~~~~~~~~~~ll~~~~~~ 130 (169)
+|+||||+|++.|+.+++++|+++|+++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 5899999999999999999999999987
No 99
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.80 E-value=1e-08 Score=49.42 Aligned_cols=28 Identities=39% Similarity=0.654 Sum_probs=26.9
Q ss_pred CCCChHHHHHhcChHHHHHHHHhcCCCc
Q 030904 103 DGAIPLHDACAGGFIEIVQLLINSASGT 130 (169)
Q Consensus 103 ~~~t~l~~a~~~~~~~~~~~ll~~~~~~ 130 (169)
+|.||||+|+..|+.+++++|+++|+++
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~ 28 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADI 28 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCC
Confidence 5899999999999999999999999998
No 100
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.70 E-value=7.4e-08 Score=73.55 Aligned_cols=92 Identities=30% Similarity=0.369 Sum_probs=60.6
Q ss_pred CCcchhHHHHHHHHcCCHHHHHHHHHhCCC-CCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHH
Q 030904 33 ETPPHLRDLAAAAQLGDVHSLRLALDNLSG-SIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDA 111 (169)
Q Consensus 33 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~-~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a 111 (169)
+.+...+.||+|+..|+-++++++|++... ..+..+..|.|+||-|+..++..++++|.+.|+.....|..|.||-..|
T Consensus 895 ~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~era 974 (1004)
T KOG0782|consen 895 QGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERA 974 (1004)
T ss_pred eCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHH
Confidence 344556667777777777777777766222 2344456677777777777777777777777776666667777777777
Q ss_pred HhcChHHHHHHHH
Q 030904 112 CAGGFIEIVQLLI 124 (169)
Q Consensus 112 ~~~~~~~~~~~ll 124 (169)
.+.|+.++..+|-
T Consensus 975 qqa~d~dlaayle 987 (1004)
T KOG0782|consen 975 QQAGDPDLAAYLE 987 (1004)
T ss_pred HhcCCchHHHHHh
Confidence 7777776666654
No 101
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.70 E-value=1.7e-07 Score=68.30 Aligned_cols=74 Identities=27% Similarity=0.297 Sum_probs=64.4
Q ss_pred CCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHH
Q 030904 33 ETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLH 109 (169)
Q Consensus 33 ~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~ 109 (169)
+.+.+- |..||+.|+.+.+++|++. |.++|.+|....+||.+|+..||.+++++|+++|+-...-...|..++.
T Consensus 34 ~~~f~e--lceacR~GD~d~v~~LVet-gvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~Y 107 (516)
T KOG0511|consen 34 KVPFGE--LCEACRAGDVDRVRYLVET-GVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHY 107 (516)
T ss_pred cCchHH--HHHHhhcccHHHHHHHHHh-CCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhh
Confidence 344444 8899999999999999997 9999999999999999999999999999999999987766666765543
No 102
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.68 E-value=7.8e-08 Score=72.14 Aligned_cols=71 Identities=31% Similarity=0.321 Sum_probs=65.2
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCccC-CCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccch
Q 030904 74 ALHLTCLYGYLPCVQLLLERGASLEAKD-EDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQ 151 (169)
Q Consensus 74 ~L~~a~~~~~~~~~~~ll~~g~~~~~~~-~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A 151 (169)
-||.+++.++.+.+--|+..|++.|.-+ ..|.||||.|++.|+..-+++|+-+|+++ +.+|.+|.||+.+|
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~-------~a~d~~GmtP~~~A 207 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADP-------GAQDSSGMTPVDYA 207 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCC-------CCCCCCCCcHHHHH
Confidence 4788899999998888889999998754 57899999999999999999999999998 89999999999999
No 103
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.67 E-value=1.6e-07 Score=62.27 Aligned_cols=65 Identities=31% Similarity=0.296 Sum_probs=41.4
Q ss_pred CCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcC-CCCCccCCCCCChHHHHHhcChHHHHHHHHhc
Q 030904 62 GSIDEPVEDGDTALHLTCLYGYLPCVQLLLERG-ASLEAKDEDGAIPLHDACAGGFIEIVQLLINS 126 (169)
Q Consensus 62 ~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g-~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~ 126 (169)
.++|.+|..|||+++.|+..|+.+.+.||+.+| +.+.+.|..+.+++.+|.+.|..+++..|.+.
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 345666666666666666666666666666666 56666666666666666666666666666554
No 104
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.67 E-value=8.4e-08 Score=73.27 Aligned_cols=113 Identities=26% Similarity=0.333 Sum_probs=91.5
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCC--CCccCCCCCChHHHHHhcChHH
Q 030904 41 LAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGAS--LEAKDEDGAIPLHDACAGGFIE 118 (169)
Q Consensus 41 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~--~~~~~~~~~t~l~~a~~~~~~~ 118 (169)
+..|+..+++--+.....+ |.+.-.++.+.++.||+|+.-|+-++|+|++.+|.. .++.+..|.|+||-|+-.++..
T Consensus 870 il~av~~~D~~klqE~h~~-gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~ 948 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLN-GGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRA 948 (1004)
T ss_pred HHHHHHhccHHHHHHHHhc-CCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchH
Confidence 4456666665445554545 666777888889999999999999999999999853 5778899999999999999999
Q ss_pred HHHHHHhcCCCchhhhhhhhcccCCCCCcccchh-----hHHHHhhhc
Q 030904 119 IVQLLINSASGTECVKRMLETVDAEGDTDCDDQN-----DLVSLFIMQ 161 (169)
Q Consensus 119 ~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~-----~~~~~li~~ 161 (169)
+..+|++.|+.. ..+|.+|.||-.-|- ++..+|=.+
T Consensus 949 vc~~lvdagasl-------~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 949 VCQLLVDAGASL-------RKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred HHHHHHhcchhh-------eecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 999999999987 688999999998873 666665443
No 105
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.59 E-value=5.5e-08 Score=78.30 Aligned_cols=96 Identities=29% Similarity=0.310 Sum_probs=69.9
Q ss_pred CCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCC
Q 030904 25 GVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDG 104 (169)
Q Consensus 25 g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~ 104 (169)
+...++......+.++||.|+..|..-.+++|++. ++++|..+..|.+|+|.+...|+...+..++++|++.++.+..|
T Consensus 644 ~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~-ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~ 722 (785)
T KOG0521|consen 644 GCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQN-GADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDG 722 (785)
T ss_pred hhhhccchhhhcccchhhhhhccchHHHHHHHHhc-CCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccC
Confidence 44455554555667778888888887777777777 77788888888888888888887777777777788877777788
Q ss_pred CChHHHHHhcChHHHHH
Q 030904 105 AIPLHDACAGGFIEIVQ 121 (169)
Q Consensus 105 ~t~l~~a~~~~~~~~~~ 121 (169)
.+++++|....+.+++-
T Consensus 723 ~~~l~~a~~~~~~d~~~ 739 (785)
T KOG0521|consen 723 KLPLDIAMEAANADIVL 739 (785)
T ss_pred cchhhHHhhhccccHHH
Confidence 88887776555444433
No 106
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.51 E-value=6.2e-07 Score=65.48 Aligned_cols=73 Identities=25% Similarity=0.273 Sum_probs=62.5
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccch
Q 030904 72 DTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQ 151 (169)
Q Consensus 72 ~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A 151 (169)
..-|..||+.|..+.+++|++.|.++|.+|++..+||.+|+--||.+++++|+++|+..+ .-..+|.-++..|
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~-------rdtf~G~RC~Yga 109 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICS-------RDTFDGDRCHYGA 109 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccc-------ccccCcchhhhhh
Confidence 445889999999999999999999999999999999999999999999999999998872 2224555555555
No 107
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.44 E-value=7.9e-07 Score=68.03 Aligned_cols=80 Identities=21% Similarity=0.221 Sum_probs=67.3
Q ss_pred HHHHHHhcCCCCcc--cCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 030904 17 DNALFEEDGVNMDL--ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERG 94 (169)
Q Consensus 17 ~~~~l~~~g~~~~~--~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g 94 (169)
..-+|+.+|-.... ...++.|.|+||.||..|+..+.+.|+=. |+++..+|..|+|+|.||...|..+|++.|+++|
T Consensus 639 t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWy-g~dv~~rda~g~t~l~yar~a~sqec~d~llq~g 717 (749)
T KOG0705|consen 639 TAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWY-GVDVMARDAHGRTALFYARQAGSQECIDVLLQYG 717 (749)
T ss_pred HHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHh-CccceecccCCchhhhhHhhcccHHHHHHHHHcC
Confidence 34456677765543 33566789999999999999999988865 9999999999999999999999999999999998
Q ss_pred CCC
Q 030904 95 ASL 97 (169)
Q Consensus 95 ~~~ 97 (169)
++-
T Consensus 718 cp~ 720 (749)
T KOG0705|consen 718 CPD 720 (749)
T ss_pred CCc
Confidence 753
No 108
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.41 E-value=2.2e-07 Score=74.87 Aligned_cols=77 Identities=32% Similarity=0.439 Sum_probs=73.3
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcc
Q 030904 69 EDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDC 148 (169)
Q Consensus 69 ~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl 148 (169)
..|.++||.|+..+....+++|+++|++++..|..|+||+|.+...|+......++++|+++ +..+..|.+|+
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~-------~a~~~~~~~~l 726 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADP-------NAFDPDGKLPL 726 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccc-------cccCccCcchh
Confidence 55799999999999999999999999999999999999999999999999999999999999 78899999999
Q ss_pred cchh
Q 030904 149 DDQN 152 (169)
Q Consensus 149 ~~A~ 152 (169)
..|.
T Consensus 727 ~~a~ 730 (785)
T KOG0521|consen 727 DIAM 730 (785)
T ss_pred hHHh
Confidence 9984
No 109
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.40 E-value=1.3e-06 Score=66.13 Aligned_cols=79 Identities=22% Similarity=0.309 Sum_probs=63.8
Q ss_pred CChHHHHHHHHhcCCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHH
Q 030904 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLL 91 (169)
Q Consensus 12 ~~~~~~~~~l~~~g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll 91 (169)
.+.....+.+... ....+...+..|.||||.|+..|+...++.|+.+ ++++..++..|++|||-|+..|+..++..++
T Consensus 31 ~~~~sl~~el~~~-~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a-~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vl 108 (560)
T KOG0522|consen 31 TDSDSLEQELLAK-VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSA-GADVSIKNNEGWSPLHEAVSTGNEQIITEVL 108 (560)
T ss_pred cchhhHHHHHhhh-hhceeccccCCCCccHHHHHHhcCHHHHHHHHhc-CCCccccccccccHHHHHHHcCCHHHHHHHH
Confidence 4444555555444 4445556677889999999999999999999999 9999999999999999999999988776655
Q ss_pred H
Q 030904 92 E 92 (169)
Q Consensus 92 ~ 92 (169)
.
T Consensus 109 r 109 (560)
T KOG0522|consen 109 R 109 (560)
T ss_pred H
Confidence 4
No 110
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.27 E-value=4e-06 Score=55.78 Aligned_cols=70 Identities=17% Similarity=0.107 Sum_probs=61.9
Q ss_pred CcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCC-CCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCC
Q 030904 28 MDLESETPPHLRDLAAAAQLGDVHSLRLALDNLS-GSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLE 98 (169)
Q Consensus 28 ~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~ 98 (169)
.+++..+..|||+++.|+..|..+.+.+|+.. | +.+...|..+.+.+.+|-+.|+.++++.|.+...+-.
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgr-g~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets 73 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGR-GVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETS 73 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhcc-CcccccccccccchHHHHHHhcChHHHHHHHHHHhccCC
Confidence 34556788999999999999999999999999 6 8899999999999999999999999999998754433
No 111
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.25 E-value=2.3e-06 Score=69.51 Aligned_cols=100 Identities=21% Similarity=0.209 Sum_probs=77.1
Q ss_pred cCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHH
Q 030904 31 ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHD 110 (169)
Q Consensus 31 ~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~ 110 (169)
....-.+.+.+|.++..+..-.++.+++-.+.....-+.+|...+|.++..|..-.+..+.-.|..++.+|..|+||||+
T Consensus 568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~w 647 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHW 647 (975)
T ss_pred ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccch
Confidence 33456788999999999999888888874233444556777788888665554333334344588999999999999999
Q ss_pred HHhcChHHHHHHHHhcCCCc
Q 030904 111 ACAGGFIEIVQLLINSASGT 130 (169)
Q Consensus 111 a~~~~~~~~~~~ll~~~~~~ 130 (169)
|..+|+..++..|++.|+++
T Consensus 648 Aa~~G~e~l~a~l~~lga~~ 667 (975)
T KOG0520|consen 648 AAFRGREKLVASLIELGADP 667 (975)
T ss_pred HhhcCHHHHHHHHHHhcccc
Confidence 99999999999999888776
No 112
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.22 E-value=4.6e-06 Score=66.50 Aligned_cols=116 Identities=21% Similarity=0.137 Sum_probs=90.6
Q ss_pred HHHHHHcCCHHHHHHHHHhCC---CCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChH
Q 030904 41 LAAAAQLGDVHSLRLALDNLS---GSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFI 117 (169)
Q Consensus 41 l~~a~~~g~~~~~~~ll~~~~---~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~ 117 (169)
...|+..|+...++..++... .++|..|.-|+++|+.|....+.++.++|++.+... ..+|.+|++.|..
T Consensus 29 fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~v 101 (822)
T KOG3609|consen 29 FLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGSV 101 (822)
T ss_pred HHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHHH
Confidence 556999999999999998643 357788999999999999999999999999876544 3589999999999
Q ss_pred HHHHHHHhcCCCchhhhhhh---hcccCCCCCcccchh-----hHHHHhhhccc
Q 030904 118 EIVQLLINSASGTECVKRML---ETVDAEGDTDCDDQN-----DLVSLFIMQQE 163 (169)
Q Consensus 118 ~~~~~ll~~~~~~~~~~~~~---~~~~~~g~tpl~~A~-----~~~~~li~~~~ 163 (169)
++++.++.+-.......... ...-..+-||+.+|+ ||+++||.++.
T Consensus 102 ~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~ 155 (822)
T KOG3609|consen 102 PLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH 155 (822)
T ss_pred HHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence 99999998743331100000 123466789999996 99999999764
No 113
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.09 E-value=2.2e-06 Score=69.61 Aligned_cols=114 Identities=20% Similarity=0.029 Sum_probs=84.5
Q ss_pred CCCChHHHHHHHHhc-CCCCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHH
Q 030904 10 EEDDSEEDNALFEED-GVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQ 88 (169)
Q Consensus 10 ~~~~~~~~~~~l~~~-g~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~ 88 (169)
++.+.+++++.+++. |-.....+.++.|. +|. |..+..+....++.-.+..++.+|..|+||||||+.+|+..++.
T Consensus 582 a~~lyawLie~~~e~~~~~~~eld~d~qgV--~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a 658 (975)
T KOG0520|consen 582 AELLYAWLIEKVIEWAGSGDLELDRDGQGV--IHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVA 658 (975)
T ss_pred HHHhHHHHHHHHhcccccCchhhcccCCCh--hhH-hhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHH
Confidence 345566677777775 55555555667776 776 55556666666665558889999999999999999999999999
Q ss_pred HHHHcCCCCCc------cCCCCCChHHHHHhcChHHHHHHHHhc
Q 030904 89 LLLERGASLEA------KDEDGAIPLHDACAGGFIEIVQLLINS 126 (169)
Q Consensus 89 ~ll~~g~~~~~------~~~~~~t~l~~a~~~~~~~~~~~ll~~ 126 (169)
.|+..|++..+ ....|.|+...|..+|+..+..+|-+.
T Consensus 659 ~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 659 SLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred HHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 99988765433 234688999999999988777666544
No 114
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.07 E-value=2.3e-05 Score=62.65 Aligned_cols=112 Identities=23% Similarity=0.198 Sum_probs=86.2
Q ss_pred CChHHHHHHHHhcCC-CCcccCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHH
Q 030904 12 DDSEEDNALFEEDGV-NMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLL 90 (169)
Q Consensus 12 ~~~~~~~~~l~~~g~-~~~~~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~l 90 (169)
++...+.+.+...+. ..|++-.++.|.++|+.|....+.++.+.|+++ +... ..+|..|+..+..++++.+
T Consensus 36 gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~-~~~~-------gdALL~aI~~~~v~~VE~l 107 (822)
T KOG3609|consen 36 GDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDT-SSEE-------GDALLLAIAVGSVPLVELL 107 (822)
T ss_pred CChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcC-cccc-------chHHHHHHHHHHHHHHHHH
Confidence 334444444444333 356677899999999999999999999999988 5443 2588889999999999999
Q ss_pred HHcCCCCC----------ccCCCCCChHHHHHhcChHHHHHHHHhcCCCch
Q 030904 91 LERGASLE----------AKDEDGAIPLHDACAGGFIEIVQLLINSASGTE 131 (169)
Q Consensus 91 l~~g~~~~----------~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~ 131 (169)
+.+..... ..-..+.||+.+|+..++.+|+++|+.+|+.++
T Consensus 108 l~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 108 LVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred HhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 98744331 122356799999999999999999999998873
No 115
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.55 E-value=0.00015 Score=54.99 Aligned_cols=65 Identities=15% Similarity=0.118 Sum_probs=46.6
Q ss_pred HHHHHHHHhcCCCCcc----cCCCcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHh
Q 030904 15 EEDNALFEEDGVNMDL----ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCL 80 (169)
Q Consensus 15 ~~~~~~l~~~g~~~~~----~~~~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~ 80 (169)
...++.+.++++..|+ .......-|+||+|+..|..+++.++|+. ++|+..+|..|.||..++..
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Lee-g~Dp~~kd~~Grtpy~ls~n 472 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEE-GCDPSTKDGAGRTPYSLSAN 472 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHh-cCCchhcccCCCCccccccc
Confidence 4455666666666554 22334456788888888888888888888 78888888888888887663
No 116
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.32 E-value=0.00082 Score=51.24 Aligned_cols=69 Identities=26% Similarity=0.231 Sum_probs=41.4
Q ss_pred HHHHHHHHHcCCCCCcc------CCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchh--hHH
Q 030904 84 LPCVQLLLERGASLEAK------DEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN--DLV 155 (169)
Q Consensus 84 ~~~~~~ll~~g~~~~~~------~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~--~~~ 155 (169)
...+++|.+.+...|.. +.--.|+||+|+..|...++..+|+.|+++ -.+|..|.||+.++. ++-
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp-------~~kd~~Grtpy~ls~nkdVk 476 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDP-------STKDGAGRTPYSLSANKDVK 476 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCc-------hhcccCCCCcccccccHHHH
Confidence 44566666665544321 222446677777777777777777777776 566777777777663 444
Q ss_pred HHhh
Q 030904 156 SLFI 159 (169)
Q Consensus 156 ~~li 159 (169)
+.++
T Consensus 477 ~~F~ 480 (591)
T KOG2505|consen 477 SIFI 480 (591)
T ss_pred HHHH
Confidence 4443
No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.27 E-value=0.0008 Score=29.89 Aligned_cols=21 Identities=43% Similarity=0.751 Sum_probs=8.2
Q ss_pred ChHHHHHhcChHHHHHHHHhc
Q 030904 106 IPLHDACAGGFIEIVQLLINS 126 (169)
Q Consensus 106 t~l~~a~~~~~~~~~~~ll~~ 126 (169)
||+|+++..++.++++.|++.
T Consensus 4 ~~l~~~~~~~~~~~~~~ll~~ 24 (30)
T smart00248 4 TPLHLAAENGNLEVVKLLLDK 24 (30)
T ss_pred CHHHHHHHcCCHHHHHHHHHc
Confidence 333333333333333333333
No 118
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.22 E-value=0.00077 Score=29.96 Aligned_cols=27 Identities=52% Similarity=0.805 Sum_probs=23.6
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCC
Q 030904 70 DGDTALHLTCLYGYLPCVQLLLERGAS 96 (169)
Q Consensus 70 ~g~~~L~~a~~~~~~~~~~~ll~~g~~ 96 (169)
.|.+|+|+++..++.++++.|++.+.+
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 367999999999999999999988764
No 119
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.32 E-value=0.028 Score=39.05 Aligned_cols=95 Identities=11% Similarity=0.075 Sum_probs=68.2
Q ss_pred CcchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccC----CCCCcHHHHHHh-c-CCHHHHHHHHHcC-CCCCc---cCCC
Q 030904 34 TPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPV----EDGDTALHLTCL-Y-GYLPCVQLLLERG-ASLEA---KDED 103 (169)
Q Consensus 34 ~~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~----~~g~~~L~~a~~-~-~~~~~~~~ll~~g-~~~~~---~~~~ 103 (169)
...-++++.++...+..+++.+|+.+.... ..| ..+.--+.++.. . .+..++++++++| +++|. +.+.
T Consensus 176 KkdA~~Am~~si~~~K~dva~~lls~f~ft--~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NS 253 (284)
T PF06128_consen 176 KKDAHQAMWLSIGNAKEDVALYLLSKFNFT--KQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNS 253 (284)
T ss_pred hHHHHHHHHHHhcccHHHHHHHHHhhccee--cchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCC
Confidence 334567788888888889999998763321 212 223334445433 2 3556899999998 67764 4678
Q ss_pred CCChHHHHHhcChHHHHHHHHhcCCCc
Q 030904 104 GAIPLHDACAGGFIEIVQLLINSASGT 130 (169)
Q Consensus 104 ~~t~l~~a~~~~~~~~~~~ll~~~~~~ 130 (169)
|.|.|..|.+.++.+++.+|+++|+..
T Consensus 254 GdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 254 GDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred cchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 999999999999999999999999854
No 120
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=90.22 E-value=1.2 Score=25.43 Aligned_cols=47 Identities=17% Similarity=0.203 Sum_probs=37.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 030904 39 RDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (169)
Q Consensus 39 t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~ 93 (169)
..+..|...|+.++++.+++. + .++ ...+..|+...+-+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~-~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKK-N-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHH-h-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 457889999999999998876 3 222 3578889999899999999875
No 121
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=89.57 E-value=1 Score=31.55 Aligned_cols=57 Identities=21% Similarity=0.247 Sum_probs=45.2
Q ss_pred HHHHHHHc--CCHHHHHHHHHhCCCCCccc---CCCCCcHHHHHHhcCCHHHHHHHHHcCCC
Q 030904 40 DLAAAAQL--GDVHSLRLALDNLSGSIDEP---VEDGDTALHLTCLYGYLPCVQLLLERGAS 96 (169)
Q Consensus 40 ~l~~a~~~--g~~~~~~~ll~~~~~~~~~~---~~~g~~~L~~a~~~~~~~~~~~ll~~g~~ 96 (169)
-+-++... .+..++++.+.++=+++|.+ ..+|.|-|..|..++..+++.+|+++|+-
T Consensus 218 dieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 218 DIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred hHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 45555543 45788899998844677753 57899999999999999999999999983
No 122
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=85.31 E-value=2.3 Score=24.17 Aligned_cols=48 Identities=19% Similarity=0.203 Sum_probs=38.5
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhc
Q 030904 72 DTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINS 126 (169)
Q Consensus 72 ~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~ 126 (169)
...+..|...|..++++.+++.+. ++ ..++..|+..-+.+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~~-~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKNK-PD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhc-cH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 356889999999999999886541 11 4579999999999999999874
No 123
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=79.43 E-value=2.3 Score=29.83 Aligned_cols=35 Identities=14% Similarity=-0.015 Sum_probs=20.2
Q ss_pred CCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCC
Q 030904 61 SGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGA 95 (169)
Q Consensus 61 ~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~ 95 (169)
|+..|.-|....|+=..|.+.++....+.|++.|+
T Consensus 5 ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv 39 (271)
T KOG1709|consen 5 GAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGV 39 (271)
T ss_pred CCCccccChhhCCchHHHHHccHHHHHHHHHHcCC
Confidence 55555555555566666666666555566655554
No 124
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=79.00 E-value=5.7 Score=27.01 Aligned_cols=80 Identities=20% Similarity=0.147 Sum_probs=52.4
Q ss_pred HHHHHHHHcCCHHHHH----HHHHhCCCCCcccCC--CCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHH
Q 030904 39 RDLAAAAQLGDVHSLR----LALDNLSGSIDEPVE--DGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDAC 112 (169)
Q Consensus 39 t~l~~a~~~g~~~~~~----~ll~~~~~~~~~~~~--~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~t~l~~a~ 112 (169)
+.+-.|....+.++.. .+++. ...-...|. --..-|.+|+..|-...+.-.+++|.+++. ++|..|+
T Consensus 106 ~iFdIA~~~kDlsLyslGY~l~~~~-~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av 178 (192)
T PF03158_consen 106 DIFDIAFAKKDLSLYSLGYKLLFNR-MMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAV 178 (192)
T ss_pred hhhhhhhhccchhHHHHHHHHHHhh-cccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHH
Confidence 3466777788766643 23333 221111111 112346778999999988888899887654 7899999
Q ss_pred hcChHHHHHHHHh
Q 030904 113 AGGFIEIVQLLIN 125 (169)
Q Consensus 113 ~~~~~~~~~~ll~ 125 (169)
..++..++.+++.
T Consensus 179 ~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 179 KYNHRKILDYFIR 191 (192)
T ss_pred HhhHHHHHHHhhc
Confidence 9999999887764
No 125
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=74.77 E-value=8.7 Score=26.14 Aligned_cols=91 Identities=16% Similarity=0.134 Sum_probs=57.9
Q ss_pred cchhHHHHHHHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHH----HHHHHcCCCCCccCCC--CCChH
Q 030904 35 PPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCV----QLLLERGASLEAKDED--GAIPL 108 (169)
Q Consensus 35 ~~~~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~----~~ll~~g~~~~~~~~~--~~t~l 108 (169)
...++.+-.||...+.++++++-+... + ..-.+.+..|....+.++. .+++.+.....-.|.. -.--|
T Consensus 74 ~~~q~LFElAC~~qkydiV~WI~qnL~--i----~~~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl 147 (192)
T PF03158_consen 74 YLNQELFELACEEQKYDIVKWIGQNLH--I----YNPEDIFDIAFAKKDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHL 147 (192)
T ss_pred hHHHHHHHHHHHHccccHHHHHhhccC--C----CCchhhhhhhhhccchhHHHHHHHHHHhhcccccccCHHHHHHHHH
Confidence 456667788999999999999854411 1 1223556677777766542 3444543322111110 01236
Q ss_pred HHHHhcChHHHHHHHHhcCCCch
Q 030904 109 HDACAGGFIEIVQLLINSASGTE 131 (169)
Q Consensus 109 ~~a~~~~~~~~~~~ll~~~~~~~ 131 (169)
..|+..|-...+--.+.+|.+++
T Consensus 148 ~~a~~kgll~F~letlkygg~~~ 170 (192)
T PF03158_consen 148 EKAAAKGLLPFVLETLKYGGNVD 170 (192)
T ss_pred HHHHHCCCHHHHHHHHHcCCccc
Confidence 78999999999888889999984
No 126
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=45.20 E-value=6.9 Score=31.52 Aligned_cols=45 Identities=33% Similarity=0.420 Sum_probs=29.9
Q ss_pred HHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCC
Q 030904 85 PCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASG 129 (169)
Q Consensus 85 ~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~ 129 (169)
..+-.+.+.++..+..|..+.+|+|+++..|..++.+.++....+
T Consensus 410 s~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~ 454 (605)
T KOG3836|consen 410 SLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVA 454 (605)
T ss_pred cceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhh
Confidence 344445555666777777777888888877777777766654433
No 127
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=40.19 E-value=7.9 Score=31.20 Aligned_cols=57 Identities=21% Similarity=0.189 Sum_probs=40.2
Q ss_pred HHHcCCHHHHHHHHHhCCCCCcccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccC
Q 030904 44 AAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKD 101 (169)
Q Consensus 44 a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~L~~a~~~~~~~~~~~ll~~g~~~~~~~ 101 (169)
++..+....+-.+++. +...+..+..+.+|+|+++..|...+.+.++....++....
T Consensus 403 ~~~~~~ss~v~~lik~-~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~ 459 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKK-GAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKS 459 (605)
T ss_pred hhhcCCccceeeeecc-cCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhccc
Confidence 3444444444445555 78888889999999999999999999888877655444433
No 128
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=36.14 E-value=14 Score=25.64 Aligned_cols=47 Identities=19% Similarity=0.199 Sum_probs=34.5
Q ss_pred CCCCChHHHHHhcChHHHHH-HHHhcCCCchhhhhhhhcccCCCCCcccch
Q 030904 102 EDGAIPLHDACAGGFIEIVQ-LLINSASGTECVKRMLETVDAEGDTDCDDQ 151 (169)
Q Consensus 102 ~~~~t~l~~a~~~~~~~~~~-~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A 151 (169)
.....|||.+++-+..+++- ++++..+.+ ..++|.-|.+|..+|.+|
T Consensus 220 ~kTe~~LHk~iki~REDVl~LYfie~daki---P~~LNd~D~nG~~ALdiA 267 (280)
T KOG4591|consen 220 GKTENPLHKAIKIEREDVLFLYFIEMDAKI---PGILNDADHNGALALDIA 267 (280)
T ss_pred CCCcchhHHhhhccccceeeehhhhccccc---cccccccCCCchHHHHHH
Confidence 34456999999999988775 466655443 244678899999999887
No 129
>COG1732 OpuBC Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) [Cell envelope biogenesis, outer membrane]
Probab=35.10 E-value=48 Score=24.56 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=20.2
Q ss_pred HHHHHHHHhCCCCCcccCCCCCcHH-HHHHhcCCHH
Q 030904 51 HSLRLALDNLSGSIDEPVEDGDTAL-HLTCLYGYLP 85 (169)
Q Consensus 51 ~~~~~ll~~~~~~~~~~~~~g~~~L-~~a~~~~~~~ 85 (169)
+++..+|++.+..+..+...|.|++ |-|...|..+
T Consensus 50 ~m~~~lle~~~~kv~~~~~lG~t~v~~~Al~~G~ID 85 (300)
T COG1732 50 NILKQLLEKNGIKVEDKTGLGGTAVVRNALKSGDID 85 (300)
T ss_pred HHHHHHHHhcCCceeeccCCCchHHHHHHHHcCCCC
Confidence 4455666665555555666666643 5666666544
No 130
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=33.35 E-value=8.9 Score=30.38 Aligned_cols=71 Identities=15% Similarity=-0.024 Sum_probs=45.3
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcC-CCCCccCCCCCChHHHHHh---cChHHHHHHHHhcCCCchhhhhhhhcccCCCCC
Q 030904 71 GDTALHLTCLYGYLPCVQLLLERG-ASLEAKDEDGAIPLHDACA---GGFIEIVQLLINSASGTECVKRMLETVDAEGDT 146 (169)
Q Consensus 71 g~~~L~~a~~~~~~~~~~~ll~~g-~~~~~~~~~~~t~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~t 146 (169)
.++++.+|+..|..+++.+++..+ .+++-.-.+|.. |.+.. .+..+....|+.++... +.+|..|+.
T Consensus 58 qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~--~C~~~g~s~~~~e~~~hL~~~k~~~-------~~tda~g~~ 128 (528)
T KOG1595|consen 58 QRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDE--HCAVLGRSVGDTERTYHLRYYKTLP-------CVTDARGNC 128 (528)
T ss_pred cccccchhhhcCccccccceeecchhhccccCCCCcc--cchhcccccCCcceeEecccccccc-------CccccCCCc
Confidence 468888888888888888877765 455544444544 33332 34455555666666665 567777776
Q ss_pred cccc
Q 030904 147 DCDD 150 (169)
Q Consensus 147 pl~~ 150 (169)
+-..
T Consensus 129 ~~~v 132 (528)
T KOG1595|consen 129 VKNV 132 (528)
T ss_pred ccCc
Confidence 6543
No 131
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=32.20 E-value=46 Score=23.62 Aligned_cols=24 Identities=8% Similarity=-0.087 Sum_probs=14.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCC
Q 030904 39 RDLAAAAQLGDVHSLRLALDNLSGS 63 (169)
Q Consensus 39 t~l~~a~~~g~~~~~~~ll~~~~~~ 63 (169)
|+=-.|...++...-+.|++. |+.
T Consensus 17 t~gd~a~ern~~rly~~lv~~-gv~ 40 (271)
T KOG1709|consen 17 TVGDLALERNQSRLYRRLVEA-GVP 40 (271)
T ss_pred CchHHHHHccHHHHHHHHHHc-CCc
Confidence 444456667777777777766 543
No 132
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=31.74 E-value=87 Score=18.06 Aligned_cols=13 Identities=8% Similarity=0.465 Sum_probs=10.0
Q ss_pred hhHHHHhhhcccc
Q 030904 152 NDLVSLFIMQQEV 164 (169)
Q Consensus 152 ~~~~~~li~~~~~ 164 (169)
.+++.+|..+|-+
T Consensus 48 ~~Li~FL~~kgKf 60 (77)
T TIGR03853 48 DELLQFLLKKGKF 60 (77)
T ss_pred HHHHHHHHHCCCE
Confidence 4888999887654
No 133
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=28.47 E-value=1e+02 Score=17.79 Aligned_cols=13 Identities=15% Similarity=0.358 Sum_probs=9.6
Q ss_pred hhHHHHhhhcccc
Q 030904 152 NDLVSLFIMQQEV 164 (169)
Q Consensus 152 ~~~~~~li~~~~~ 164 (169)
.+++.+|..++-+
T Consensus 50 ~eLv~FL~~rgKf 62 (78)
T PF10678_consen 50 DELVDFLEERGKF 62 (78)
T ss_pred HHHHHHHHHcCCE
Confidence 4888888887643
No 134
>KOG4335 consensus FERM domain-containing protein KRIT1 [Signal transduction mechanisms]
Probab=26.99 E-value=39 Score=26.88 Aligned_cols=72 Identities=8% Similarity=-0.116 Sum_probs=42.0
Q ss_pred HHHHHHHHHcCCCCCccCCCCCChHHHHHhcChHHHHHHHHhcCCCchhhhhhhhcccCCCCCcccchhhHHHHhhhc
Q 030904 84 LPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDLVSLFIMQ 161 (169)
Q Consensus 84 ~~~~~~ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~li~~ 161 (169)
.++...+++.....+.....++++|+.+...+|.+.+.+....---. .+.....+.++.....+..++++.+
T Consensus 157 s~l~~v~lk~k~~p~~l~gq~sp~lll~~~s~h~~~v~~d~~~~~~~------rn~~~~~~re~~~~~ee~a~~n~ee 228 (558)
T KOG4335|consen 157 SPLLEVQLKPKHQPNYLLGQQSPELLLRFTSAHDDDVAMDEPFLQFR------RNVFFPKGRELQIIDEEVARLNYEE 228 (558)
T ss_pred CHHHHHhhccccCCchhhccCCchhhhhccCCchhhhhccccchHHh------hhhhcccCcchhhhHHHHHHHhHHH
Confidence 34555555555566666667778888887777777766544321111 1455566666666554554544443
Done!