Query 030906
Match_columns 169
No_of_seqs 316 out of 1519
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 06:22:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030906.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030906hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1552 Predicted alpha/beta h 99.3 5.1E-12 1.1E-16 105.2 5.4 63 1-63 194-256 (258)
2 TIGR03343 biphenyl_bphD 2-hydr 98.8 7.6E-09 1.7E-13 84.2 7.0 56 1-57 225-281 (282)
3 PLN02965 Probable pheophorbida 98.8 1.2E-08 2.6E-13 83.0 7.1 59 1-60 195-254 (255)
4 PLN02824 hydrolase, alpha/beta 98.8 1.4E-08 3.1E-13 84.0 6.6 57 1-58 236-293 (294)
5 TIGR03611 RutD pyrimidine util 98.8 2.1E-08 4.5E-13 78.9 7.1 56 1-57 200-256 (257)
6 PRK10349 carboxylesterase BioH 98.8 2.3E-08 4.9E-13 80.9 7.0 57 1-58 198-255 (256)
7 PHA02857 monoglyceride lipase; 98.7 4.2E-08 9.2E-13 80.1 7.5 59 1-59 211-273 (276)
8 KOG4391 Predicted alpha/beta h 98.7 1.9E-08 4E-13 83.0 5.1 63 1-63 223-286 (300)
9 PF00326 Peptidase_S9: Prolyl 98.7 3.2E-08 6.9E-13 78.6 6.4 61 1-61 146-211 (213)
10 TIGR02240 PHA_depoly_arom poly 98.7 5.1E-08 1.1E-12 80.1 7.2 58 1-60 209-267 (276)
11 PRK07581 hypothetical protein; 98.7 5.6E-08 1.2E-12 82.4 7.4 61 1-62 277-339 (339)
12 TIGR03056 bchO_mg_che_rel puta 98.7 5.7E-08 1.2E-12 78.1 7.1 56 1-57 222-278 (278)
13 PLN02385 hydrolase; alpha/beta 98.7 4.9E-08 1.1E-12 83.4 6.9 60 1-60 281-346 (349)
14 PLN02679 hydrolase, alpha/beta 98.7 4.9E-08 1.1E-12 84.3 6.4 58 1-59 294-357 (360)
15 KOG1454 Predicted hydrolase/ac 98.6 7.9E-08 1.7E-12 82.8 7.3 58 1-59 266-324 (326)
16 TIGR02427 protocat_pcaD 3-oxoa 98.6 1E-07 2.2E-12 74.1 6.8 56 1-57 195-251 (251)
17 PRK03592 haloalkane dehalogena 98.6 6.8E-08 1.5E-12 79.9 6.0 60 1-61 230-291 (295)
18 PLN02298 hydrolase, alpha/beta 98.6 8.2E-08 1.8E-12 81.0 6.4 60 1-60 253-318 (330)
19 PLN03087 BODYGUARD 1 domain co 98.6 1E-07 2.2E-12 86.2 7.2 57 1-58 420-478 (481)
20 PRK03204 haloalkane dehalogena 98.6 9.7E-08 2.1E-12 79.6 6.5 56 1-57 229-286 (286)
21 PRK06489 hypothetical protein; 98.6 1.6E-07 3.4E-12 80.8 7.2 59 1-61 294-359 (360)
22 PRK10749 lysophospholipase L2; 98.6 1.3E-07 2.8E-12 80.5 6.4 59 1-59 261-329 (330)
23 PRK10673 acyl-CoA esterase; Pr 98.6 2E-07 4.3E-12 74.6 6.9 57 1-58 197-254 (255)
24 PRK13604 luxD acyl transferase 98.5 2E-07 4.4E-12 80.0 6.9 57 1-61 204-261 (307)
25 PRK08775 homoserine O-acetyltr 98.5 1.8E-07 3.8E-12 79.9 5.8 60 1-60 279-340 (343)
26 PRK00870 haloalkane dehalogena 98.5 1.8E-07 3.8E-12 77.9 5.7 57 1-58 241-300 (302)
27 PLN02652 hydrolase; alpha/beta 98.5 3.6E-07 7.9E-12 80.5 7.1 61 1-61 326-389 (395)
28 PLN02578 hydrolase 98.5 4.4E-07 9.5E-12 78.0 7.4 55 1-57 298-353 (354)
29 PRK10566 esterase; Provisional 98.5 5.5E-07 1.2E-11 72.5 7.2 56 1-59 188-248 (249)
30 PRK00175 metX homoserine O-ace 98.4 5.4E-07 1.2E-11 78.3 6.7 60 1-60 311-375 (379)
31 TIGR01392 homoserO_Ac_trn homo 98.4 3.8E-07 8.3E-12 78.1 5.5 56 1-57 290-351 (351)
32 TIGR01249 pro_imino_pep_1 prol 98.4 1E-06 2.2E-11 73.9 7.5 55 1-58 250-304 (306)
33 PLN03084 alpha/beta hydrolase 98.3 1.8E-06 4E-11 75.9 7.3 55 1-57 327-382 (383)
34 PF08386 Abhydrolase_4: TAP-li 98.3 3.2E-06 6.9E-11 61.3 6.7 59 1-60 36-95 (103)
35 TIGR01607 PST-A Plasmodium sub 98.3 2.7E-06 5.8E-11 72.9 7.3 58 1-58 272-332 (332)
36 COG1506 DAP2 Dipeptidyl aminop 98.3 2.4E-06 5.2E-11 79.2 7.5 61 1-61 553-618 (620)
37 PLN02894 hydrolase, alpha/beta 98.3 3E-06 6.5E-11 74.6 7.7 63 1-64 327-390 (402)
38 PF02230 Abhydrolase_2: Phosph 98.3 3.7E-06 8E-11 67.4 7.6 56 1-59 157-215 (216)
39 PRK11460 putative hydrolase; P 98.2 4.3E-06 9.3E-11 68.2 7.4 54 1-57 150-206 (232)
40 PRK06765 homoserine O-acetyltr 98.2 3.9E-06 8.4E-11 74.0 7.0 58 1-58 325-387 (389)
41 KOG2984 Predicted hydrolase [G 98.1 1.7E-06 3.7E-11 70.9 3.5 58 1-59 218-276 (277)
42 KOG4667 Predicted esterase [Li 98.1 2.5E-06 5.4E-11 70.4 3.8 57 1-58 201-257 (269)
43 PLN02980 2-oxoglutarate decarb 98.0 7.7E-06 1.7E-10 83.3 6.6 64 1-65 1570-1645(1655)
44 PLN02511 hydrolase 98.0 5.9E-06 1.3E-10 72.4 4.8 60 1-61 300-367 (388)
45 COG1073 Hydrolases of the alph 98.0 1.7E-05 3.6E-10 63.8 6.7 59 1-59 234-297 (299)
46 PLN02211 methyl indole-3-aceta 98.0 2.4E-05 5.3E-10 65.0 7.6 56 1-58 213-269 (273)
47 PRK05855 short chain dehydroge 98.0 8.2E-06 1.8E-10 72.9 4.9 58 1-60 235-293 (582)
48 COG1647 Esterase/lipase [Gener 98.0 1.1E-05 2.4E-10 66.5 5.2 57 1-57 183-242 (243)
49 PLN02872 triacylglycerol lipas 98.0 1.6E-05 3.5E-10 70.3 6.6 63 1-63 327-393 (395)
50 KOG2382 Predicted alpha/beta h 98.0 1.5E-05 3.3E-10 68.6 5.8 59 1-60 255-314 (315)
51 KOG1455 Lysophospholipase [Lip 97.9 1.5E-05 3.2E-10 68.3 5.1 58 1-58 248-311 (313)
52 PRK05077 frsA fermentation/res 97.9 3.8E-05 8.2E-10 68.1 7.1 56 1-59 357-412 (414)
53 KOG4178 Soluble epoxide hydrol 97.8 4.6E-05 1E-09 65.8 6.8 60 1-60 260-321 (322)
54 COG2267 PldB Lysophospholipase 97.7 6.9E-05 1.5E-09 63.8 6.2 61 1-61 230-296 (298)
55 COG0596 MhpC Predicted hydrola 97.7 0.00012 2.5E-09 55.5 6.8 57 1-57 223-280 (282)
56 COG0400 Predicted esterase [Ge 97.7 0.0001 2.2E-09 60.1 6.4 54 1-58 148-204 (207)
57 PRK07868 acyl-CoA synthetase; 97.7 8.4E-05 1.8E-09 72.3 6.8 60 1-61 299-363 (994)
58 PF01738 DLH: Dienelactone hyd 97.7 0.00014 3.1E-09 57.9 6.8 59 1-59 147-217 (218)
59 PRK10985 putative hydrolase; P 97.6 0.0001 2.3E-09 62.5 5.5 58 1-59 257-320 (324)
60 TIGR01836 PHA_synth_III_C poly 97.6 0.00014 3E-09 62.4 6.0 57 1-58 288-349 (350)
61 COG2945 Predicted hydrolase of 97.2 0.00052 1.1E-08 55.7 4.8 55 1-57 151-205 (210)
62 KOG4409 Predicted hydrolase/ac 97.2 0.00093 2E-08 58.4 6.4 58 1-59 305-364 (365)
63 TIGR03100 hydr1_PEP hydrolase, 97.1 0.00071 1.5E-08 56.2 5.0 57 1-57 209-273 (274)
64 TIGR01838 PHA_synth_I poly(R)- 97.1 0.00059 1.3E-08 62.7 4.8 43 1-44 417-459 (532)
65 PLN02442 S-formylglutathione h 97.1 0.0013 2.8E-08 55.2 6.2 59 1-60 219-281 (283)
66 KOG2551 Phospholipase/carboxyh 97.0 0.002 4.4E-08 53.2 6.4 57 1-60 165-221 (230)
67 TIGR02821 fghA_ester_D S-formy 97.0 0.0015 3.2E-08 54.3 5.6 55 1-56 213-271 (275)
68 COG3545 Predicted esterase of 96.9 0.0028 6E-08 50.7 6.2 57 1-59 119-179 (181)
69 TIGR01250 pro_imino_pep_2 prol 96.9 0.0035 7.7E-08 49.6 6.8 44 13-57 244-288 (288)
70 KOG2100 Dipeptidyl aminopeptid 96.9 0.0037 8E-08 59.7 7.8 63 2-64 685-752 (755)
71 TIGR01849 PHB_depoly_PhaZ poly 96.9 0.0013 2.9E-08 58.6 4.6 58 1-58 340-405 (406)
72 PF08840 BAAT_C: BAAT / Acyl-C 96.7 0.0027 5.9E-08 51.3 5.0 41 1-41 117-163 (213)
73 PF10142 PhoPQ_related: PhoPQ- 96.7 0.0035 7.5E-08 55.3 6.0 61 1-63 264-324 (367)
74 PRK05371 x-prolyl-dipeptidyl a 96.6 0.006 1.3E-07 58.4 7.4 60 1-61 457-521 (767)
75 PF07519 Tannase: Tannase and 96.6 0.0029 6.4E-08 57.3 4.6 60 2-61 356-429 (474)
76 KOG2112 Lysophospholipase [Lip 96.5 0.0047 1E-07 50.4 5.0 55 1-58 146-203 (206)
77 PRK10115 protease 2; Provision 96.4 0.0082 1.8E-07 56.7 6.8 59 1-59 608-675 (686)
78 PF05448 AXE1: Acetyl xylan es 96.4 0.0067 1.4E-07 52.3 5.4 55 1-58 264-319 (320)
79 KOG3043 Predicted hydrolase re 96.3 0.013 2.8E-07 48.6 6.5 59 1-59 166-240 (242)
80 PRK10162 acetyl esterase; Prov 96.2 0.012 2.6E-07 50.1 6.0 58 1-60 250-316 (318)
81 PF03583 LIP: Secretory lipase 96.1 0.015 3.2E-07 49.3 6.3 54 1-54 221-280 (290)
82 TIGR03695 menH_SHCHC 2-succiny 96.0 0.018 3.8E-07 44.1 5.8 42 15-57 209-251 (251)
83 COG0412 Dienelactone hydrolase 95.8 0.04 8.7E-07 45.4 7.1 60 1-60 160-234 (236)
84 COG3208 GrsT Predicted thioest 95.4 0.042 9.2E-07 45.9 6.0 57 1-58 178-235 (244)
85 PF06850 PHB_depo_C: PHB de-po 95.4 0.032 6.9E-07 45.3 5.1 58 1-58 136-201 (202)
86 KOG3253 Predicted alpha/beta h 95.2 0.09 2E-06 49.4 7.9 61 1-61 306-380 (784)
87 COG0429 Predicted hydrolase of 94.9 0.028 6.1E-07 49.0 3.6 60 1-60 276-341 (345)
88 PF00450 Peptidase_S10: Serine 94.2 0.054 1.2E-06 46.8 3.9 57 1-57 332-414 (415)
89 PLN02213 sinapoylglucose-malat 94.2 0.15 3.2E-06 43.7 6.5 57 1-58 235-316 (319)
90 PF08538 DUF1749: Protein of u 94.2 0.024 5.2E-07 48.8 1.6 57 1-57 234-303 (303)
91 TIGR01839 PHA_synth_II poly(R) 94.1 0.078 1.7E-06 49.2 4.7 40 1-41 443-482 (560)
92 PTZ00472 serine carboxypeptida 94.0 0.11 2.4E-06 46.9 5.6 58 1-58 366-458 (462)
93 PF06028 DUF915: Alpha/beta hy 93.4 0.12 2.5E-06 43.4 4.4 55 2-56 187-252 (255)
94 PF09752 DUF2048: Uncharacteri 93.2 0.15 3.3E-06 44.7 4.9 54 2-57 292-347 (348)
95 COG3571 Predicted hydrolase of 93.2 0.15 3.2E-06 40.9 4.2 39 1-41 144-182 (213)
96 PRK11126 2-succinyl-6-hydroxy- 93.0 0.11 2.4E-06 40.9 3.4 30 29-58 211-241 (242)
97 COG0657 Aes Esterase/lipase [L 92.5 0.32 6.9E-06 40.8 5.8 55 1-57 247-308 (312)
98 PLN00021 chlorophyllase 92.5 0.1 2.2E-06 44.9 2.7 42 1-42 191-242 (313)
99 PLN03016 sinapoylglucose-malat 92.1 0.47 1E-05 42.6 6.7 57 1-58 349-430 (433)
100 KOG2281 Dipeptidyl aminopeptid 91.7 0.4 8.7E-06 45.5 5.8 57 2-58 805-866 (867)
101 KOG1282 Serine carboxypeptidas 91.6 0.43 9.3E-06 43.3 5.8 59 1-59 365-448 (454)
102 PLN02209 serine carboxypeptida 91.3 0.64 1.4E-05 41.9 6.6 57 1-58 353-434 (437)
103 COG4287 PqaA PhoPQ-activated p 89.9 0.19 4.1E-06 44.9 1.9 43 1-43 331-373 (507)
104 COG3243 PhaC Poly(3-hydroxyalk 89.6 0.5 1.1E-05 42.6 4.3 62 1-63 332-403 (445)
105 COG2021 MET2 Homoserine acetyl 89.4 1.2 2.6E-05 39.5 6.4 58 1-58 308-367 (368)
106 PF02273 Acyl_transf_2: Acyl t 89.1 0.95 2.1E-05 38.5 5.4 44 1-44 197-241 (294)
107 KOG1551 Uncharacterized conser 88.9 0.83 1.8E-05 39.3 5.0 58 2-61 309-368 (371)
108 PF10605 3HBOH: 3HB-oligomer h 88.6 0.25 5.5E-06 46.3 1.8 41 1-41 557-604 (690)
109 COG1505 Serine proteases of th 88.2 1.7 3.7E-05 40.9 6.8 59 1-59 582-646 (648)
110 PRK14875 acetoin dehydrogenase 88.0 0.69 1.5E-05 39.0 4.0 34 25-58 336-370 (371)
111 TIGR01738 bioH putative pimelo 85.8 3.3 7.2E-05 31.4 6.5 18 29-46 217-234 (245)
112 COG3458 Acetyl esterase (deace 85.8 1.9 4.1E-05 37.1 5.4 43 1-43 261-303 (321)
113 KOG2521 Uncharacterized conser 85.1 2.9 6.2E-05 36.8 6.4 67 1-67 227-298 (350)
114 PF05705 DUF829: Eukaryotic pr 84.8 1.2 2.7E-05 35.9 3.8 49 1-49 180-232 (240)
115 COG4099 Predicted peptidase [G 84.0 0.53 1.1E-05 41.1 1.3 43 1-43 317-369 (387)
116 KOG1515 Arylacetamide deacetyl 83.2 2.1 4.6E-05 37.4 4.7 57 1-59 270-335 (336)
117 KOG1838 Alpha/beta hydrolase [ 81.0 2.2 4.7E-05 38.4 4.0 62 1-63 324-392 (409)
118 PF06500 DUF1100: Alpha/beta h 79.7 2.4 5.2E-05 38.1 3.9 54 1-58 354-408 (411)
119 KOG2624 Triglyceride lipase-ch 75.5 7.3 0.00016 34.9 5.7 60 1-60 334-399 (403)
120 COG4814 Uncharacterized protei 71.8 13 0.00028 31.8 6.0 57 2-58 219-286 (288)
121 COG4553 DepA Poly-beta-hydroxy 71.8 5.9 0.00013 34.7 4.0 62 2-63 342-411 (415)
122 PF03096 Ndr: Ndr family; Int 71.2 12 0.00025 32.2 5.7 58 1-60 221-280 (283)
123 COG4757 Predicted alpha/beta h 70.8 11 0.00024 31.9 5.3 56 1-56 218-280 (281)
124 PF11339 DUF3141: Protein of u 66.0 11 0.00025 35.1 4.9 66 1-66 299-378 (581)
125 PRK10673 acyl-CoA esterase; Pr 65.7 30 0.00065 27.1 6.8 56 1-59 18-78 (255)
126 PF11144 DUF2920: Protein of u 61.9 31 0.00068 31.0 6.8 61 3-63 297-372 (403)
127 PLN02824 hydrolase, alpha/beta 61.2 34 0.00073 27.8 6.5 57 1-60 31-100 (294)
128 PRK10439 enterobactin/ferric e 60.1 14 0.00031 32.9 4.4 49 2-52 352-403 (411)
129 TIGR02240 PHA_depoly_arom poly 60.1 37 0.00081 27.4 6.6 57 1-60 27-89 (276)
130 PF12146 Hydrolase_4: Putative 57.9 34 0.00074 23.2 5.1 53 2-57 19-79 (79)
131 KOG4627 Kynurenine formamidase 56.1 17 0.00037 30.4 3.8 41 1-42 209-249 (270)
132 PLN02578 hydrolase 53.7 66 0.0014 27.4 7.3 58 1-61 88-151 (354)
133 PRK11071 esterase YqiA; Provis 52.5 19 0.00041 28.2 3.5 28 29-57 162-189 (190)
134 PF12740 Chlorophyllase2: Chlo 51.6 16 0.00034 30.9 3.1 45 1-45 156-210 (259)
135 PRK04940 hypothetical protein; 51.3 38 0.00081 27.1 5.0 34 23-57 145-178 (180)
136 PRK03592 haloalkane dehalogena 51.3 76 0.0017 25.7 7.1 57 1-60 29-91 (295)
137 PF12697 Abhydrolase_6: Alpha/ 50.7 67 0.0014 23.5 6.2 57 2-61 1-65 (228)
138 PLN02733 phosphatidylcholine-s 44.6 13 0.00028 33.7 1.5 54 3-60 370-423 (440)
139 PF06342 DUF1057: Alpha/beta h 44.6 52 0.0011 28.4 5.1 27 1-27 214-240 (297)
140 COG4188 Predicted dienelactone 41.3 14 0.00031 32.8 1.3 44 1-44 253-298 (365)
141 PF13709 DUF4159: Domain of un 40.7 1.4E+02 0.0029 24.1 6.8 36 1-37 55-90 (207)
142 KOG2931 Differentiation-relate 39.9 1.4E+02 0.003 26.2 7.0 62 1-64 248-311 (326)
143 PF00975 Thioesterase: Thioest 39.6 25 0.00055 27.3 2.4 43 1-44 170-215 (229)
144 TIGR03056 bchO_mg_che_rel puta 38.9 1.7E+02 0.0036 22.8 7.1 56 1-59 30-92 (278)
145 PRK14875 acetoin dehydrogenase 37.4 1.2E+02 0.0027 25.2 6.4 57 1-60 133-195 (371)
146 PLN03084 alpha/beta hydrolase 37.1 95 0.0021 27.3 5.8 57 1-60 129-195 (383)
147 KOG2237 Predicted serine prote 36.6 91 0.002 30.0 5.8 61 2-62 635-708 (712)
148 PRK00870 haloalkane dehalogena 36.6 1.4E+02 0.003 24.4 6.4 56 1-59 48-112 (302)
149 PRK03204 haloalkane dehalogena 35.9 1.7E+02 0.0037 23.9 6.9 56 1-59 36-98 (286)
150 PLN02679 hydrolase, alpha/beta 35.6 1.8E+02 0.0038 24.9 7.2 56 1-59 90-152 (360)
151 PF05576 Peptidase_S37: PS-10 34.8 32 0.00068 31.3 2.4 51 2-57 354-412 (448)
152 TIGR03611 RutD pyrimidine util 33.9 1.9E+02 0.0042 21.8 6.6 56 1-59 15-77 (257)
153 TIGR02427 protocat_pcaD 3-oxoa 32.4 2.1E+02 0.0046 21.3 6.5 55 2-59 16-76 (251)
154 PF01674 Lipase_2: Lipase (cla 32.1 63 0.0014 26.4 3.6 62 1-62 3-72 (219)
155 TIGR01738 bioH putative pimelo 31.2 89 0.0019 23.4 4.2 38 1-41 6-43 (245)
156 PF14714 KH_dom-like: KH-domai 30.7 90 0.0019 21.4 3.7 27 1-27 40-66 (80)
157 KOG3975 Uncharacterized conser 29.5 1.2E+02 0.0026 26.1 4.9 54 2-56 245-300 (301)
158 PF05577 Peptidase_S28: Serine 28.6 40 0.00086 29.7 2.0 36 2-41 379-414 (434)
159 COG3509 LpqC Poly(3-hydroxybut 27.4 1.4E+02 0.0031 26.0 5.1 38 4-41 213-276 (312)
160 TIGR03100 hydr1_PEP hydrolase, 27.4 3.1E+02 0.0067 22.3 7.1 60 1-60 28-93 (274)
161 PRK05077 frsA fermentation/res 26.9 2.8E+02 0.0061 24.5 7.1 58 1-59 195-259 (414)
162 PF06821 Ser_hydrolase: Serine 26.5 1.4E+02 0.003 23.1 4.6 14 30-43 143-156 (171)
163 PLN02652 hydrolase; alpha/beta 25.8 1.9E+02 0.0041 25.5 5.8 57 1-60 138-202 (395)
164 KOG2541 Palmitoyl protein thio 25.2 3E+02 0.0065 23.8 6.6 28 1-28 25-54 (296)
165 KOG2564 Predicted acetyltransf 25.2 65 0.0014 28.2 2.6 35 26-60 293-328 (343)
166 COG2908 Uncharacterized protei 24.4 80 0.0017 26.4 3.0 25 1-27 107-131 (237)
167 COG2267 PldB Lysophospholipase 24.1 1.7E+02 0.0038 24.6 5.1 58 2-61 37-102 (298)
168 PRK10749 lysophospholipase L2; 24.1 2.9E+02 0.0064 23.0 6.5 56 1-59 56-124 (330)
169 COG2382 Fes Enterochelin ester 24.1 1.5E+02 0.0033 25.6 4.7 49 5-56 245-296 (299)
170 PLN02965 Probable pheophorbida 23.2 2.6E+02 0.0055 22.1 5.7 56 2-60 6-69 (255)
171 PRK05855 short chain dehydroge 20.3 3.8E+02 0.0083 23.7 6.7 56 1-59 27-90 (582)
No 1
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.27 E-value=5.1e-12 Score=105.23 Aligned_cols=63 Identities=57% Similarity=1.059 Sum_probs=60.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccHHHHHHHHHHHHhhhcCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFPEYLRHLKKFITSVEKSP 63 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~pe~~~~l~~FL~~~~~s~ 63 (169)
|||||||+.|++||++||.+||+.++++.+.+|+.|+||+.++.+++|+..+..|+..+.+.+
T Consensus 194 PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~~~~~ 256 (258)
T KOG1552|consen 194 PVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYIEHLRRFISSVLPSQ 256 (258)
T ss_pred CEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHHHHHHHHHHHhcccC
Confidence 899999999999999999999999999889999999999999999999999999999887654
No 2
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.84 E-value=7.6e-09 Score=84.21 Aligned_cols=56 Identities=20% Similarity=0.153 Sum_probs=52.3
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~ 57 (169)
|+|+|+|++|.+||+..++.++..+++ +++++++++||+.+.+.| .+.+.|..||.
T Consensus 225 Pvlli~G~~D~~v~~~~~~~~~~~~~~-~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 225 KTLVTWGRDDRFVPLDHGLKLLWNMPD-AQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CEEEEEccCCCcCCchhHHHHHHhCCC-CEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 899999999999999999999999988 789999999999988887 78899999986
No 3
>PLN02965 Probable pheophorbidase
Probab=98.81 E-value=1.2e-08 Score=83.02 Aligned_cols=59 Identities=14% Similarity=0.185 Sum_probs=54.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~~ 60 (169)
|+|+|+|++|.++|+..++.+.+.+++ +++++++|+||+.+.+.| +++..|.+|++.+.
T Consensus 195 P~lvi~g~~D~~~~~~~~~~~~~~~~~-a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 195 PRVYIKTAKDNLFDPVRQDVMVENWPP-AQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred CEEEEEcCCCCCCCHHHHHHHHHhCCc-ceEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999998 689999999999988887 89999999988653
No 4
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.77 E-value=1.4e-08 Score=83.97 Aligned_cols=57 Identities=19% Similarity=0.217 Sum_probs=51.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~ 58 (169)
|||||+|++|.++|+..++.+.+.++. .+++++++|||+.+.+.| ++...|.+||+.
T Consensus 236 P~lvi~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 236 PVLIAWGEKDPWEPVELGRAYANFDAV-EDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred CeEEEEecCCCCCChHHHHHHHhcCCc-cceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 899999999999999999998877765 689999999999988877 889999999975
No 5
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.77 E-value=2.1e-08 Score=78.92 Aligned_cols=56 Identities=20% Similarity=0.204 Sum_probs=51.0
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~ 57 (169)
|+|||||++|.++|++.++.+++.+++ .++++++++||..+.+.+ +++..|.+||+
T Consensus 200 P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 200 PVLLIANRDDMLVPYTQSLRLAAALPN-AQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred cEEEEecCcCcccCHHHHHHHHHhcCC-ceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 899999999999999999999999887 589999999999877666 78899999986
No 6
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.75 E-value=2.3e-08 Score=80.90 Aligned_cols=57 Identities=19% Similarity=0.166 Sum_probs=51.8
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~ 58 (169)
|||||+|++|.++|.+.+..+.+.+++ +++++++++||+.+.+.| .|+..|.+|-+.
T Consensus 198 P~lii~G~~D~~~~~~~~~~~~~~i~~-~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 198 PFLRLYGYLDGLVPRKVVPMLDKLWPH-SESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CeEEEecCCCccCCHHHHHHHHHhCCC-CeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 899999999999999999999999988 689999999999988887 788899988653
No 7
>PHA02857 monoglyceride lipase; Provisional
Probab=98.71 E-value=4.2e-08 Score=80.14 Aligned_cols=59 Identities=19% Similarity=0.219 Sum_probs=51.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH----HHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP----EYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p----e~~~~l~~FL~~~ 59 (169)
|||||||++|.+||+..++.+++.+....++++++|+||..+.+.+ ++++.+.+||...
T Consensus 211 Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 211 PILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999988554689999999999876543 6888899999864
No 8
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.71 E-value=1.9e-08 Score=83.02 Aligned_cols=63 Identities=30% Similarity=0.481 Sum_probs=58.6
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCc-cEEEeCCCCCCCCCccHHHHHHHHHHHHhhhcCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKY-EPLWLKGGNHCDLELFPEYLRHLKKFITSVEKSP 63 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~-el~~i~gagH~~~~~~pe~~~~l~~FL~~~~~s~ 63 (169)
|+|+|.|..|++||+-+..+||+.|+... .++.||+|.|++.|..+.|++.|.+||.++.++.
T Consensus 223 P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~~~~~ 286 (300)
T KOG4391|consen 223 PFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDFLAEVVKSS 286 (300)
T ss_pred ceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHHHHHhccCC
Confidence 89999999999999999999999999754 5999999999999999999999999999988853
No 9
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.71 E-value=3.2e-08 Score=78.56 Aligned_cols=61 Identities=20% Similarity=0.232 Sum_probs=49.8
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeCCCCCCCCCc-c-HHHHHHHHHHHHhhhc
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLKGGNHCDLEL-F-PEYLRHLKKFITSVEK 61 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~gagH~~~~~-~-pe~~~~l~~FL~~~~~ 61 (169)
|||||||++|.+||+.++..|++.+... .++++++++||..... . ..+...+.+||+...+
T Consensus 146 P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 146 PVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp EEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 8999999999999999999999998753 4799999999965432 2 2778899999987654
No 10
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.69 E-value=5.1e-08 Score=80.08 Aligned_cols=58 Identities=19% Similarity=0.087 Sum_probs=52.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~~ 60 (169)
|||||||++|.+||+.+++.|.+.+++ .+++++++ ||+.+.+.| +++..|.+||....
T Consensus 209 P~lii~G~~D~~v~~~~~~~l~~~~~~-~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 209 PTLVLAGDDDPIIPLINMRLLAWRIPN-AELHIIDD-GHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred CEEEEEeCCCCcCCHHHHHHHHHhCCC-CEEEEEcC-CCchhhccHHHHHHHHHHHHHHhh
Confidence 899999999999999999999999988 68889985 999888777 89999999998754
No 11
>PRK07581 hypothetical protein; Validated
Probab=98.68 E-value=5.6e-08 Score=82.42 Aligned_cols=61 Identities=11% Similarity=-0.079 Sum_probs=54.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCC-CCCCCCCc-cHHHHHHHHHHHHhhhcC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKG-GNHCDLEL-FPEYLRHLKKFITSVEKS 62 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~g-agH~~~~~-~pe~~~~l~~FL~~~~~s 62 (169)
|||||||++|.++|+..+..+.+.+++ .+++++++ +||..+.+ .+.++..|.+||.++..|
T Consensus 277 PtLvI~G~~D~~~p~~~~~~l~~~ip~-a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~~ 339 (339)
T PRK07581 277 KTFVMPISTDLYFPPEDCEAEAALIPN-AELRPIESIWGHLAGFGQNPADIAFIDAALKELLAS 339 (339)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEeCCCCCccccccCcHHHHHHHHHHHHHHHhC
Confidence 899999999999999999999999988 68999999 99987655 459999999999987643
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.68 E-value=5.7e-08 Score=78.14 Aligned_cols=56 Identities=13% Similarity=0.061 Sum_probs=50.9
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~ 57 (169)
|+|||+|++|.+||...++.+.+.+++ .++++++|+||+.+.+.+ ++++.|.+||+
T Consensus 222 P~lii~g~~D~~vp~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 222 PLHLIAGEEDKAVPPDESKRAATRVPT-ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred CEEEEEeCCCcccCHHHHHHHHHhccC-CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 899999999999999999999998887 689999999999877666 89999999984
No 13
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.67 E-value=4.9e-08 Score=83.44 Aligned_cols=60 Identities=27% Similarity=0.314 Sum_probs=51.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC-CccEEEeCCCCCCCCCccH-H----HHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE-KYEPLWLKGGNHCDLELFP-E----YLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~-~~el~~i~gagH~~~~~~p-e----~~~~l~~FL~~~~ 60 (169)
|||||||++|.+||+.+++.+++.++. ..++++|+|+||+.+.+.| + ++..|.+||....
T Consensus 281 P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 281 PLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred CEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 899999999999999999999998854 2589999999999876654 3 7788999998653
No 14
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.65 E-value=4.9e-08 Score=84.25 Aligned_cols=58 Identities=19% Similarity=0.162 Sum_probs=48.8
Q ss_pred CEEEEEeCCCCccCHHH-----HHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSH-----GRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~-----s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~ 59 (169)
|||||||++|.++|+.. ...|.+.+++ .++++|+|+||+.+.+.| +++..|.+||..+
T Consensus 294 PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~-~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 294 PILVLWGDQDPFTPLDGPVGKYFSSLPSQLPN-VTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred CEEEEEeCCCCCcCchhhHHHHHHhhhccCCc-eEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 89999999999999874 2345555666 689999999999988887 8899999999864
No 15
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.64 E-value=7.9e-08 Score=82.83 Aligned_cols=58 Identities=22% Similarity=0.260 Sum_probs=53.7
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~ 59 (169)
|+|||||..|+++|++.+..+...+++ .++++++||||..+.+.| +++..|..|+...
T Consensus 266 pvlii~G~~D~~~p~~~~~~~~~~~pn-~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 266 PVLIIWGDKDQIVPLELAEELKKKLPN-AELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred ceEEEEcCcCCccCHHHHHHHHhhCCC-ceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 899999999999999999999999966 799999999999988877 8999999999865
No 16
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.62 E-value=1e-07 Score=74.06 Aligned_cols=56 Identities=18% Similarity=0.211 Sum_probs=50.3
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~ 57 (169)
|+|||||++|.++|++....+.+.+++ .++++++++||+.+.+.+ ++.+.|.+||.
T Consensus 195 Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 195 PTLCIAGDQDGSTPPELVREIADLVPG-ARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CeEEEEeccCCcCChHHHHHHHHhCCC-ceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 899999999999999999999998887 689999999999877776 78889999973
No 17
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.61 E-value=6.8e-08 Score=79.91 Aligned_cols=60 Identities=12% Similarity=0.083 Sum_probs=48.8
Q ss_pred CEEEEEeCCCCccCH-HHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHhhhc
Q 030906 1 MWLVVQGTADEVVDC-SHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITSVEK 61 (169)
Q Consensus 1 PvLIIHG~~D~vVP~-~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~~~ 61 (169)
|||||||.+|.++++ ...+.+.+.+++ .++++++++||+.+.+.| ++++.|..||..+..
T Consensus 230 P~lii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 230 PKLLINAEPGAILTTGAIRDWCRSWPNQ-LEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CeEEEeccCCcccCcHHHHHHHHHhhhh-cceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 899999999999954 454444555665 689999999999988877 888999999986543
No 18
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.61 E-value=8.2e-08 Score=81.00 Aligned_cols=60 Identities=23% Similarity=0.223 Sum_probs=51.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC-CccEEEeCCCCCCCCCccH-----HHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE-KYEPLWLKGGNHCDLELFP-----EYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~-~~el~~i~gagH~~~~~~p-----e~~~~l~~FL~~~~ 60 (169)
|||||||++|.+||+.+++.|++.++. .+++++++|+||+.+.+.+ .++..|.+||....
T Consensus 253 PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 253 PFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred CEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999864 2689999999999875433 46778899998864
No 19
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.60 E-value=1e-07 Score=86.20 Aligned_cols=57 Identities=12% Similarity=0.125 Sum_probs=51.7
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCC-ccH-HHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLE-LFP-EYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~-~~p-e~~~~l~~FL~~ 58 (169)
|||||||.+|.++|+++++.+.+.+++ .++++++|+||+.+. +.| +|+..|.+|...
T Consensus 420 PtLII~Ge~D~ivP~~~~~~la~~iP~-a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 420 DVAIFHGGDDELIPVECSYAVKAKVPR-ARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred CEEEEEECCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 899999999999999999999999998 789999999999774 555 899999999864
No 20
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.60 E-value=9.7e-08 Score=79.57 Aligned_cols=56 Identities=16% Similarity=0.007 Sum_probs=49.7
Q ss_pred CEEEEEeCCCCccCH-HHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDC-SHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~-~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~ 57 (169)
|||||||.+|.++|+ ..++.+.+.+++ .++++++++||+.+.+.| +++..|.+||.
T Consensus 229 PtliI~G~~D~~~~~~~~~~~~~~~ip~-~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 229 PTLLVWGMKDVAFRPKTILPRLRATFPD-HVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred CeEEEecCCCcccCcHHHHHHHHHhcCC-CeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 899999999999865 468889999998 689999999999988887 78899999973
No 21
>PRK06489 hypothetical protein; Provisional
Probab=98.57 E-value=1.6e-07 Score=80.79 Aligned_cols=59 Identities=15% Similarity=0.120 Sum_probs=52.0
Q ss_pred CEEEEEeCCCCccCHHHH--HHHHHHhcCCccEEEeCCC----CCCCCCccH-HHHHHHHHHHHhhhc
Q 030906 1 MWLVVQGTADEVVDCSHG--RQLWELCQEKYEPLWLKGG----NHCDLELFP-EYLRHLKKFITSVEK 61 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s--~~L~e~l~~~~el~~i~ga----gH~~~~~~p-e~~~~l~~FL~~~~~ 61 (169)
|||||+|++|.++|+..+ +.+.+.+++ .++++|+++ ||+.+ +.| +|+..|.+||..+.+
T Consensus 294 PvLvI~G~~D~~~p~~~~~~~~la~~ip~-a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 294 PVLAINSADDERNPPETGVMEAALKRVKH-GRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred CEEEEecCCCcccChhhHHHHHHHHhCcC-CeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhccc
Confidence 899999999999999976 789999988 689999996 99987 455 899999999987654
No 22
>PRK10749 lysophospholipase L2; Provisional
Probab=98.56 E-value=1.3e-07 Score=80.48 Aligned_cols=59 Identities=24% Similarity=0.214 Sum_probs=49.7
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC------CccEEEeCCCCCCCCCcc----HHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE------KYEPLWLKGGNHCDLELF----PEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~------~~el~~i~gagH~~~~~~----pe~~~~l~~FL~~~ 59 (169)
|||||||++|.+||++.++.+++.++. .+++++|+|+||..+.+. ..++..|.+||+..
T Consensus 261 P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 261 PLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 899999999999999999999998753 137999999999987543 36888899998753
No 23
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.55 E-value=2e-07 Score=74.61 Aligned_cols=57 Identities=16% Similarity=0.222 Sum_probs=52.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~ 58 (169)
|+|+|+|++|.+|+.+.++.+.+.+++ .++++++|+||+.+.+.| ++++.|..||..
T Consensus 197 P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 197 PALFIRGGNSPYVTEAYRDDLLAQFPQ-ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhCCC-cEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 899999999999999999999999988 689999999999887777 789999999974
No 24
>PRK13604 luxD acyl transferase; Provisional
Probab=98.54 E-value=2e-07 Score=79.97 Aligned_cols=57 Identities=26% Similarity=0.226 Sum_probs=46.0
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhc-CCccEEEeCCCCCCCCCccHHHHHHHHHHHHhhhc
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQ-EKYEPLWLKGGNHCDLELFPEYLRHLKKFITSVEK 61 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~-~~~el~~i~gagH~~~~~~pe~~~~l~~FL~~~~~ 61 (169)
|+|||||++|.+||+++++.|++.++ .++++++++|++|...+. .-.+.+|.+.+.+
T Consensus 204 PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~~----~~~~~~~~~~~~~ 261 (307)
T PRK13604 204 PFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGEN----LVVLRNFYQSVTK 261 (307)
T ss_pred CEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCcc----hHHHHHHHHHHHH
Confidence 89999999999999999999999986 457899999999987653 2344555555443
No 25
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.51 E-value=1.8e-07 Score=79.93 Aligned_cols=60 Identities=17% Similarity=-0.047 Sum_probs=52.6
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCC-CCCCCCCccH-HHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKG-GNHCDLELFP-EYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~g-agH~~~~~~p-e~~~~l~~FL~~~~ 60 (169)
|+|||+|++|.++|+..+..+++.+....+++++++ +||+.+.+.| +|+..|.+||..+.
T Consensus 279 PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 279 PTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred CeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 899999999999999999999998843368999985 9999888777 89999999998654
No 26
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.51 E-value=1.8e-07 Score=77.92 Aligned_cols=57 Identities=18% Similarity=0.115 Sum_probs=49.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCc--cEEEeCCCCCCCCCccH-HHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKY--EPLWLKGGNHCDLELFP-EYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~--el~~i~gagH~~~~~~p-e~~~~l~~FL~~ 58 (169)
|||||||++|.++|+.. ..+.+.+++.. .+++++|+||+.+.+.+ +++..|..||..
T Consensus 241 P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 241 PFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred ceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 89999999999999866 88888888732 37899999999887777 788899999975
No 27
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.47 E-value=3.6e-07 Score=80.54 Aligned_cols=61 Identities=21% Similarity=0.184 Sum_probs=52.6
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC-ccEEEeCCCCCCCCCc-c-HHHHHHHHHHHHhhhc
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK-YEPLWLKGGNHCDLEL-F-PEYLRHLKKFITSVEK 61 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~-~el~~i~gagH~~~~~-~-pe~~~~l~~FL~~~~~ 61 (169)
|+|||||++|.+||+++++.+++.+... .++++|+|++|..+.+ . .++++.|.+||.....
T Consensus 326 PvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 326 PFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999997653 5799999999997554 3 4899999999987553
No 28
>PLN02578 hydrolase
Probab=98.47 E-value=4.4e-07 Score=77.97 Aligned_cols=55 Identities=16% Similarity=0.289 Sum_probs=50.3
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~ 57 (169)
|+|+|||++|.+||...++.+.+.+++ .+++++ ++||+.+.+.| ++++.|.+||+
T Consensus 298 PvLiI~G~~D~~v~~~~~~~l~~~~p~-a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 298 PLLLLWGDLDPWVGPAKAEKIKAFYPD-TTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhCCC-CEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 899999999999999999999999988 588888 69999988877 89999999986
No 29
>PRK10566 esterase; Provisional
Probab=98.45 E-value=5.5e-07 Score=72.48 Aligned_cols=56 Identities=29% Similarity=0.344 Sum_probs=47.7
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC-----ccEEEeCCCCCCCCCccHHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK-----YEPLWLKGGNHCDLELFPEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~-----~el~~i~gagH~~~~~~pe~~~~l~~FL~~~ 59 (169)
|+|||||++|.+||+.++..|++.++.. .++++++|+||... +..+..+..||++.
T Consensus 188 P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~~~~~~~~fl~~~ 248 (249)
T PRK10566 188 PLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PEALDAGVAFFRQH 248 (249)
T ss_pred CEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HHHHHHHHHHHHhh
Confidence 8999999999999999999999988753 36778999999853 56788899999753
No 30
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.42 E-value=5.4e-07 Score=78.33 Aligned_cols=60 Identities=18% Similarity=0.146 Sum_probs=52.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeC-CCCCCCCCccH-HHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLK-GGNHCDLELFP-EYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~-gagH~~~~~~p-e~~~~l~~FL~~~~ 60 (169)
|||||+|++|.++|+..++.+.+.+++. ..+++++ ++||+.+.+.| +|+..|..||..+.
T Consensus 311 PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 311 RFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred CEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 8999999999999999999999999883 1566674 99999877776 88999999998754
No 31
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.41 E-value=3.8e-07 Score=78.07 Aligned_cols=56 Identities=16% Similarity=0.059 Sum_probs=48.9
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEE-----EeCCCCCCCCCccH-HHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPL-----WLKGGNHCDLELFP-EYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~-----~i~gagH~~~~~~p-e~~~~l~~FL~ 57 (169)
|||||+|.+|.++|+..++.+.+.+++ .+++ +++++||+.+.+.+ +|...|.+||.
T Consensus 290 P~Lvi~G~~D~~~p~~~~~~~a~~i~~-~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 290 PFLVVSITSDWLFPPAESRELAKALPA-AGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CEEEEEeCCccccCHHHHHHHHHHHhh-cCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 899999999999999999999999998 4443 56799999877776 88999999984
No 32
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.39 E-value=1e-06 Score=73.90 Aligned_cols=55 Identities=18% Similarity=0.143 Sum_probs=45.3
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccHHHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFPEYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~pe~~~~l~~FL~~ 58 (169)
|+|||||.+|.+||+..+..+++.+++ .++++++|+||+.+ .++.+..|.+|+..
T Consensus 250 P~lii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~--~~~~~~~i~~~~~~ 304 (306)
T TIGR01249 250 PTYIVHGRYDLCCPLQSAWALHKAFPE-AELKVTNNAGHSAF--DPNNLAALVHALET 304 (306)
T ss_pred CeEEEecCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCCCC--ChHHHHHHHHHHHH
Confidence 899999999999999999999999987 68999999999975 34444555555543
No 33
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.30 E-value=1.8e-06 Score=75.87 Aligned_cols=55 Identities=13% Similarity=0.011 Sum_probs=49.5
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~ 57 (169)
|||||||+.|.++++..++.+++.. + .+++++++|||+.+++.| +++..|..||.
T Consensus 327 PvLiI~G~~D~~v~~~~~~~~a~~~-~-a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 327 PITVCWGLRDRWLNYDGVEDFCKSS-Q-HKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred CEEEEeeCCCCCcCHHHHHHHHHhc-C-CeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 8999999999999999999988874 4 589999999999988887 88899999985
No 34
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.27 E-value=3.2e-06 Score=61.27 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=51.8
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCC-ccHHHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLE-LFPEYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~-~~pe~~~~l~~FL~~~~ 60 (169)
|+|||.|+.|.++|+..+..+.+.+++ ..++.++|.||..+. ..+-..+.|.+||..-.
T Consensus 36 piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~ 95 (103)
T PF08386_consen 36 PILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGT 95 (103)
T ss_pred CEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcceecCCChHHHHHHHHHHHcCC
Confidence 899999999999999999999999998 689999999999874 34567788999998544
No 35
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.26 E-value=2.7e-06 Score=72.90 Aligned_cols=58 Identities=16% Similarity=0.108 Sum_probs=50.0
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC-CccEEEeCCCCCCCCCcc--HHHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE-KYEPLWLKGGNHCDLELF--PEYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~-~~el~~i~gagH~~~~~~--pe~~~~l~~FL~~ 58 (169)
|+|||||++|.+|++..+..+++.+.. ..++++++|++|..+.+. ++++..|.+||.+
T Consensus 272 P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 272 PILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWISN 332 (332)
T ss_pred CEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhhC
Confidence 899999999999999999999988753 257899999999987664 4889999999863
No 36
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.26 E-value=2.4e-06 Score=79.21 Aligned_cols=61 Identities=18% Similarity=0.186 Sum_probs=51.3
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeCCCCCCCCCcc--HHHHHHHHHHHHhhhc
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLKGGNHCDLELF--PEYLRHLKKFITSVEK 61 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~gagH~~~~~~--pe~~~~l~~FL~~~~~ 61 (169)
|+|||||++|..||++++.+|++.|+.. +++++||+.||...... -.++..+.+||....+
T Consensus 553 P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 553 PLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred CEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999853 47999999999875522 3678888888887654
No 37
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.26 E-value=3e-06 Score=74.58 Aligned_cols=63 Identities=10% Similarity=-0.038 Sum_probs=51.5
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHhhhcCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITSVEKSPS 64 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~~~s~~ 64 (169)
|||+|+|.+|.+++ ..+..+++.+....++++++|+||+.+.+.| +|++.|.+|+.....-..
T Consensus 327 P~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~~ 390 (402)
T PLN02894 327 PTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPDR 390 (402)
T ss_pred CEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCCc
Confidence 89999999998765 6676777777544689999999999888877 899999999987665543
No 38
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.26 E-value=3.7e-06 Score=67.41 Aligned_cols=56 Identities=29% Similarity=0.362 Sum_probs=44.0
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeCCCCCCCCCccHHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLKGGNHCDLELFPEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~gagH~~~~~~pe~~~~l~~FL~~~ 59 (169)
|+|++||+.|.+||++.++.+++.+... .+++.|+|+||.. .++.+..+.+||.+.
T Consensus 157 pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i---~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 157 PILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI---SPEELRDLREFLEKH 215 (216)
T ss_dssp -EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----HHHHHHHHHHHHHH
T ss_pred cEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC---CHHHHHHHHHHHhhh
Confidence 7999999999999999999999999864 3688999999976 356777788888753
No 39
>PRK11460 putative hydrolase; Provisional
Probab=98.22 E-value=4.3e-06 Score=68.22 Aligned_cols=54 Identities=15% Similarity=0.117 Sum_probs=42.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeCCCCCCCCCccHHHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLKGGNHCDLELFPEYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~gagH~~~~~~pe~~~~l~~FL~ 57 (169)
|+|++||++|.+||++.++.+++.+... +++++++|+||... ++.+..+.+||.
T Consensus 150 pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~---~~~~~~~~~~l~ 206 (232)
T PRK11460 150 TIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID---PRLMQFALDRLR 206 (232)
T ss_pred cEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC---HHHHHHHHHHHH
Confidence 7999999999999999999999988743 46888999999863 334444444443
No 40
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.19 E-value=3.9e-06 Score=73.99 Aligned_cols=58 Identities=10% Similarity=0.074 Sum_probs=51.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC---CccEEEeCC-CCCCCCCccH-HHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE---KYEPLWLKG-GNHCDLELFP-EYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~---~~el~~i~g-agH~~~~~~p-e~~~~l~~FL~~ 58 (169)
|||||+|+.|.++|+..++.+.+.+++ ..+++++++ +||..+.+.+ ++...|.+||..
T Consensus 325 PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 325 NVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 899999999999999999999999974 367899985 9999877766 899999999964
No 41
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.15 E-value=1.7e-06 Score=70.91 Aligned_cols=58 Identities=17% Similarity=0.099 Sum_probs=53.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~ 59 (169)
|+||+||..|.+|+-.|+-.+....+. +++++++.++|+.+..++ +|+..+.+||+..
T Consensus 218 Ptli~hG~kDp~~~~~hv~fi~~~~~~-a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 218 PTLIMHGGKDPFCGDPHVCFIPVLKSL-AKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred CeeEeeCCcCCCCCCCCccchhhhccc-ceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 899999999999999999999988888 689999999999888776 8999999999853
No 42
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.11 E-value=2.5e-06 Score=70.36 Aligned_cols=57 Identities=18% Similarity=0.255 Sum_probs=49.8
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccHHHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFPEYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~pe~~~~l~~FL~~ 58 (169)
|||-+||.+|.|||.+.|..+++.+++ ++|.+++||.|+......+.......|+..
T Consensus 201 ~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iIEgADHnyt~~q~~l~~lgl~f~k~ 257 (269)
T KOG4667|consen 201 RVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEIIEGADHNYTGHQSQLVSLGLEFIKT 257 (269)
T ss_pred ceEEEeccCCceeechhHHHHHHhccC-CceEEecCCCcCccchhhhHhhhcceeEEe
Confidence 689999999999999999999999999 799999999999766556777777777654
No 43
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.05 E-value=7.7e-06 Score=83.32 Aligned_cols=64 Identities=20% Similarity=0.264 Sum_probs=54.3
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC-----------ccEEEeCCCCCCCCCccH-HHHHHHHHHHHhhhcCCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK-----------YEPLWLKGGNHCDLELFP-EYLRHLKKFITSVEKSPSR 65 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~-----------~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~~~s~~~ 65 (169)
|+|||+|++|.++| ..+..+.+.+++. .++++++++||+.+.+.| +|+..|..||....++.-+
T Consensus 1570 PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~~~~ 1645 (1655)
T PLN02980 1570 PLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNSSTP 1645 (1655)
T ss_pred CEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccccCCC
Confidence 89999999999885 7788888888762 379999999999988887 7999999999988765543
No 44
>PLN02511 hydrolase
Probab=98.03 E-value=5.9e-06 Score=72.37 Aligned_cols=60 Identities=15% Similarity=0.122 Sum_probs=48.4
Q ss_pred CEEEEEeCCCCccCHHHH-HHHHHHhcCCccEEEeCCCCCCCCCccH-H------HHHHHHHHHHhhhc
Q 030906 1 MWLVVQGTADEVVDCSHG-RQLWELCQEKYEPLWLKGGNHCDLELFP-E------YLRHLKKFITSVEK 61 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s-~~L~e~l~~~~el~~i~gagH~~~~~~p-e------~~~~l~~FL~~~~~ 61 (169)
|||||||.+|.++|+... ..+.+.+++ .+++++++|||+.+.+.+ . +...|.+||..+..
T Consensus 300 PtLiI~g~dDpi~p~~~~~~~~~~~~p~-~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 300 PLLCIQAANDPIAPARGIPREDIKANPN-CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred CeEEEEcCCCCcCCcccCcHhHHhcCCC-EEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 899999999999998765 455666666 689999999999877665 2 47899999987653
No 45
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.01 E-value=1.7e-05 Score=63.81 Aligned_cols=59 Identities=34% Similarity=0.502 Sum_probs=51.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC-CccEEEeCCCCCCCCC-ccH---HHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE-KYEPLWLKGGNHCDLE-LFP---EYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~-~~el~~i~gagH~~~~-~~p---e~~~~l~~FL~~~ 59 (169)
|+|++||..|.+||..++..++..+.. +.+++++++++|.... ..+ +++..+..||...
T Consensus 234 P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 234 PVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred ceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999998 6688899999999765 333 6888999998764
No 46
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.99 E-value=2.4e-05 Score=65.04 Aligned_cols=56 Identities=16% Similarity=0.096 Sum_probs=48.6
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~ 58 (169)
|+|+|+|++|.+||++..+.+.+.++. .++++++ +||.++...| ++...|..+...
T Consensus 213 P~l~I~g~~D~~ip~~~~~~m~~~~~~-~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 213 PRVYIKTLHDHVVKPEQQEAMIKRWPP-SQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred ceEEEEeCCCCCCCHHHHHHHHHhCCc-cEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 899999999999999999999999887 4788897 8999988877 777777777654
No 47
>PRK05855 short chain dehydrogenase; Validated
Probab=97.98 E-value=8.2e-06 Score=72.91 Aligned_cols=58 Identities=17% Similarity=0.067 Sum_probs=50.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~~ 60 (169)
|+|||||.+|.+||+..+..+.+.+++ ..+++++ +||+.+.+.| ++...|.+||....
T Consensus 235 P~lii~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 235 PVQLIVPTGDPYVRPALYDDLSRWVPR-LWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred ceEEEEeCCCcccCHHHhccccccCCc-ceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 899999999999999999999888776 5677776 6999888777 78899999998754
No 48
>COG1647 Esterase/lipase [General function prediction only]
Probab=97.98 E-value=1.1e-05 Score=66.53 Aligned_cols=57 Identities=25% Similarity=0.337 Sum_probs=50.0
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC-CccEEEeCCCCCCCCCcc--HHHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE-KYEPLWLKGGNHCDLELF--PEYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~-~~el~~i~gagH~~~~~~--pe~~~~l~~FL~ 57 (169)
|+||++|.+|++||.+.|..+|+.+.. .+++.|+++.||....+. ..+.+.|..||+
T Consensus 183 pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 183 PTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred chhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 899999999999999999999998864 457999999999876654 378889999996
No 49
>PLN02872 triacylglycerol lipase
Probab=97.98 E-value=1.6e-05 Score=70.26 Aligned_cols=63 Identities=22% Similarity=0.257 Sum_probs=52.9
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCC---CccH-HHHHHHHHHHHhhhcCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDL---ELFP-EYLRHLKKFITSVEKSP 63 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~---~~~p-e~~~~l~~FL~~~~~s~ 63 (169)
|++|++|++|.++++..+..+++.++...++++++++||..+ .+.+ +++..|.+||+....+.
T Consensus 327 Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~~ 393 (395)
T PLN02872 327 PLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKSS 393 (395)
T ss_pred cEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhcc
Confidence 899999999999999999999999987557889999999743 2444 68899999998765543
No 50
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.96 E-value=1.5e-05 Score=68.61 Aligned_cols=59 Identities=19% Similarity=0.232 Sum_probs=54.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~~ 60 (169)
|||+|+|.++..||.++-..+...++. ++++++++|||+.+.+.| +|+..|.+||...+
T Consensus 255 pvlfi~g~~S~fv~~~~~~~~~~~fp~-~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 255 PVLFIKGLQSKFVPDEHYPRMEKIFPN-VEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred ceeEEecCCCCCcChhHHHHHHHhccc-hheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 899999999999999999999998888 799999999999999988 89999999997653
No 51
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.92 E-value=1.5e-05 Score=68.28 Aligned_cols=58 Identities=19% Similarity=0.232 Sum_probs=49.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC-ccEEEeCCCCCCCCC--ccH---HHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK-YEPLWLKGGNHCDLE--LFP---EYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~-~el~~i~gagH~~~~--~~p---e~~~~l~~FL~~ 58 (169)
|+||+||++|.|+.++.++.||+.+... +.+-+|||+-|..+. ..+ .++..|.+||+.
T Consensus 248 PflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 248 PFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred cEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 8999999999999999999999999864 469999999999774 222 577788899875
No 52
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.87 E-value=3.8e-05 Score=68.08 Aligned_cols=56 Identities=11% Similarity=-0.007 Sum_probs=47.3
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccHHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFPEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~pe~~~~l~~FL~~~ 59 (169)
|+|||||++|.+||++.++.|...+++ .++++++++.| +...++++..|.+||...
T Consensus 357 PvLiI~G~~D~ivP~~~a~~l~~~~~~-~~l~~i~~~~~--~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 357 PMLSGYWKNDPFSPEEDSRLIASSSAD-GKLLEIPFKPV--YRNFDKALQEISDWLEDR 412 (414)
T ss_pred cEEEEecCCCCCCCHHHHHHHHHhCCC-CeEEEccCCCc--cCCHHHHHHHHHHHHHHH
Confidence 899999999999999999999888877 68999998722 234568999999999764
No 53
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=97.84 E-value=4.6e-05 Score=65.76 Aligned_cols=60 Identities=22% Similarity=0.206 Sum_probs=52.4
Q ss_pred CEEEEEeCCCCccCHH-HHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCS-HGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~-~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~~ 60 (169)
||++|+|..|.+.++. ++..+-..++.-.+.++++|+||+...+.| +++++|..||++..
T Consensus 260 Pv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 260 PVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred ceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhhc
Confidence 8999999999999976 777777778876688999999999888877 89999999998753
No 54
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.74 E-value=6.9e-05 Score=63.75 Aligned_cols=61 Identities=23% Similarity=0.229 Sum_probs=51.6
Q ss_pred CEEEEEeCCCCccC-HHHHHHHHHHhcCC-ccEEEeCCCCCCCCCcc----HHHHHHHHHHHHhhhc
Q 030906 1 MWLVVQGTADEVVD-CSHGRQLWELCQEK-YEPLWLKGGNHCDLELF----PEYLRHLKKFITSVEK 61 (169)
Q Consensus 1 PvLIIHG~~D~vVP-~~~s~~L~e~l~~~-~el~~i~gagH~~~~~~----pe~~~~l~~FL~~~~~ 61 (169)
||||+||++|.+|+ ......+++.+..+ +++.+|+|+.|..+.+. .++++.+.+||.....
T Consensus 230 PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 230 PVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred CEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 89999999999999 79999999988876 47999999999876653 4788888888876543
No 55
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.72 E-value=0.00012 Score=55.49 Aligned_cols=57 Identities=21% Similarity=0.278 Sum_probs=45.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~ 57 (169)
|+|+|+|..|.++|......+.+.++...++++++++||+.+.+.+ .++..+..|+.
T Consensus 223 P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 223 PTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred CeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 8999999999888887767776767643579999999999988776 67777766543
No 56
>COG0400 Predicted esterase [General function prediction only]
Probab=97.70 E-value=0.0001 Score=60.07 Aligned_cols=54 Identities=28% Similarity=0.370 Sum_probs=43.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeCCCCCCCCCccHHHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLKGGNHCDLELFPEYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~gagH~~~~~~pe~~~~l~~FL~~ 58 (169)
|||++||+.|.|||+..+.+|.+.+... ++..+++ +||... ++.++.+..||.+
T Consensus 148 pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~---~e~~~~~~~wl~~ 204 (207)
T COG0400 148 PILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIP---PEELEAARSWLAN 204 (207)
T ss_pred eEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCC---HHHHHHHHHHHHh
Confidence 8999999999999999999999887643 4688888 899753 3456666667764
No 57
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.69 E-value=8.4e-05 Score=72.32 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=51.7
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccE-EEeCCCCCCCCCc----cHHHHHHHHHHHHhhhc
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEP-LWLKGGNHCDLEL----FPEYLRHLKKFITSVEK 61 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el-~~i~gagH~~~~~----~pe~~~~l~~FL~~~~~ 61 (169)
|+|+|||+.|.++|+.+++.+.+.+++ .++ ++++++||+.+.. ..++|..|.+||.....
T Consensus 299 P~L~i~G~~D~ivp~~~~~~l~~~i~~-a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 299 PVLAFVGEVDDIGQPASVRGIRRAAPN-AEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 899999999999999999999999987 465 6789999997654 23899999999997654
No 58
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=97.67 E-value=0.00014 Score=57.88 Aligned_cols=59 Identities=15% Similarity=0.043 Sum_probs=42.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC---CccEEEeCCCCCCCCCc-----c----HHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE---KYEPLWLKGGNHCDLEL-----F----PEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~---~~el~~i~gagH~~~~~-----~----pe~~~~l~~FL~~~ 59 (169)
|+|+++|++|+.+|.+....+.+.+.. ..++++|+|++|..... . .+.+..+.+||+++
T Consensus 147 P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 147 PVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp -EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred CEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999888843 35799999999985432 1 15678889998764
No 59
>PRK10985 putative hydrolase; Provisional
Probab=97.61 E-value=0.0001 Score=62.54 Aligned_cols=58 Identities=14% Similarity=0.081 Sum_probs=45.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCcc----H--HHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELF----P--EYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~----p--e~~~~l~~FL~~~ 59 (169)
|+|||+|.+|.++|+.....+.+.+++ ..++++++|||+.+.+. + -+-..+.+||...
T Consensus 257 P~lii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 257 PTLIIHAKDDPFMTHEVIPKPESLPPN-VEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CEEEEecCCCCCCChhhChHHHHhCCC-eEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 899999999999999988887666655 67889999999876531 2 3445788888654
No 60
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=97.59 E-value=0.00014 Score=62.37 Aligned_cols=57 Identities=19% Similarity=0.278 Sum_probs=46.6
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC-ccEEEeCCCCCCCCCcc----HHHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK-YEPLWLKGGNHCDLELF----PEYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~-~el~~i~gagH~~~~~~----pe~~~~l~~FL~~ 58 (169)
|+|+++|++|.++|+..++.+++.++.. .++++++ +||..+... .+++..|.+||..
T Consensus 288 Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 288 PILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 8999999999999999999999998863 4577777 688764432 3788999999864
No 61
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.21 E-value=0.00052 Score=55.65 Aligned_cols=55 Identities=25% Similarity=0.261 Sum_probs=48.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccHHHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFPEYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~pe~~~~l~~FL~ 57 (169)
|+|||||+.|++|++......++-++ ..+++++|++|+.......+.+.|.+||.
T Consensus 151 ~~lvi~g~~Ddvv~l~~~l~~~~~~~--~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 151 PGLVIQGDADDVVDLVAVLKWQESIK--ITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred CceeEecChhhhhcHHHHHHhhcCCC--CceEEecCCCceecccHHHHHHHHHHHhh
Confidence 68999999999999999999888643 36889999999988777888999999985
No 62
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.19 E-value=0.00093 Score=58.43 Aligned_cols=58 Identities=17% Similarity=0.095 Sum_probs=47.0
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHh-cCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELC-QEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l-~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~ 59 (169)
||++|||..|-+ +...|..+...+ ...++.++++||||..+.++| .|++.|..++..+
T Consensus 305 pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 305 PVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred CEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 899999999865 677777777754 444689999999999888887 7888999988753
No 63
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.14 E-value=0.00071 Score=56.19 Aligned_cols=57 Identities=9% Similarity=0.041 Sum_probs=41.6
Q ss_pred CEEEEEeCCCCccCHHH-----HHHHHHHhc-CCccEEEeCCCCCCCCC-cc-HHHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSH-----GRQLWELCQ-EKYEPLWLKGGNHCDLE-LF-PEYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~-----s~~L~e~l~-~~~el~~i~gagH~~~~-~~-pe~~~~l~~FL~ 57 (169)
|+|+++|+.|.+++.-. +....+.+. ...+++++++++|+... .. .++...|.+||+
T Consensus 209 P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 209 PVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred cEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 89999999999875322 144445453 22689999999998733 33 389999999995
No 64
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.13 E-value=0.00059 Score=62.71 Aligned_cols=43 Identities=9% Similarity=0.001 Sum_probs=38.5
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCc
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLEL 44 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~ 44 (169)
|+|+|+|.+|.++|+..++.+.+.+++ ...++++++||+.+..
T Consensus 417 PvLvV~G~~D~IvP~~sa~~l~~~i~~-~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 417 PVYIIATREDHIAPWQSAYRGAALLGG-PKTFVLGESGHIAGVV 459 (532)
T ss_pred CEEEEeeCCCCcCCHHHHHHHHHHCCC-CEEEEECCCCCchHhh
Confidence 899999999999999999999999986 5778999999986543
No 65
>PLN02442 S-formylglutathione hydrolase
Probab=97.09 E-value=0.0013 Score=55.16 Aligned_cols=59 Identities=17% Similarity=0.183 Sum_probs=39.3
Q ss_pred CEEEEEeCCCCccCHH-HHHHHHHHhcC---CccEEEeCCCCCCCCCccHHHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCS-HGRQLWELCQE---KYEPLWLKGGNHCDLELFPEYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~-~s~~L~e~l~~---~~el~~i~gagH~~~~~~pe~~~~l~~FL~~~~ 60 (169)
|+||+||++|.+||.. ++..+++.+.. +.++++++|++|..+. ...++.....|.....
T Consensus 219 pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~~-~~~~i~~~~~~~~~~~ 281 (283)
T PLN02442 219 TILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYFF-IATFIDDHINHHAQAL 281 (283)
T ss_pred CEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHHH-HHHHHHHHHHHHHHHh
Confidence 8999999999999974 46666666543 3578999999997542 1233333344444433
No 66
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.01 E-value=0.002 Score=53.17 Aligned_cols=57 Identities=23% Similarity=0.268 Sum_probs=46.5
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccHHHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFPEYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~pe~~~~l~~FL~~~~ 60 (169)
|.|-|.|+.|.+||...+..|++.++++ .++.-.+||...... .|.+.|.+||....
T Consensus 165 PSLHi~G~~D~iv~~~~s~~L~~~~~~a--~vl~HpggH~VP~~~-~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 165 PSLHIFGETDTIVPSERSEQLAESFKDA--TVLEHPGGHIVPNKA-KYKEKIADFIQSFL 221 (230)
T ss_pred CeeEEecccceeecchHHHHHHHhcCCC--eEEecCCCccCCCch-HHHHHHHHHHHHHH
Confidence 7899999999999999999999999995 555556899865433 67778888887654
No 67
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.99 E-value=0.0015 Score=54.28 Aligned_cols=55 Identities=18% Similarity=0.224 Sum_probs=39.7
Q ss_pred CEEEEEeCCCCccCH-HHHHHHHHHhcCC---ccEEEeCCCCCCCCCccHHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDC-SHGRQLWELCQEK---YEPLWLKGGNHCDLELFPEYLRHLKKFI 56 (169)
Q Consensus 1 PvLIIHG~~D~vVP~-~~s~~L~e~l~~~---~el~~i~gagH~~~~~~pe~~~~l~~FL 56 (169)
|+||+||+.|.+||. .++..+.+.+... .++++++|++|..... ..++.....|.
T Consensus 213 plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~~-~~~~~~~~~~~ 271 (275)
T TIGR02821 213 TILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYFI-ASFIADHLRHH 271 (275)
T ss_pred CeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchhH-HHhHHHHHHHH
Confidence 789999999999999 5777777777643 4788899999986442 33444444444
No 68
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=96.92 E-value=0.0028 Score=50.66 Aligned_cols=57 Identities=19% Similarity=0.248 Sum_probs=48.9
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCC----CCccHHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCD----LELFPEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~----~~~~pe~~~~l~~FL~~~ 59 (169)
|.++++..+|++|++++++.+.+.... .|+.+..+||.+ +...|+....+.+|+...
T Consensus 119 ps~vvaSrnDp~~~~~~a~~~a~~wgs--~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~~ 179 (181)
T COG3545 119 PSVVVASRNDPYVSYEHAEDLANAWGS--ALVDVGEGGHINAESGFGPWPEGYALLAQLLSRA 179 (181)
T ss_pred ceeEEEecCCCCCCHHHHHHHHHhccH--hheecccccccchhhcCCCcHHHHHHHHHHhhhh
Confidence 689999999999999999999998877 689999999986 345678888888888654
No 69
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=96.89 E-value=0.0035 Score=49.59 Aligned_cols=44 Identities=23% Similarity=0.338 Sum_probs=37.3
Q ss_pred cCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHH
Q 030906 13 VDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFIT 57 (169)
Q Consensus 13 VP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~ 57 (169)
+++..++.+.+.+++ .++++++++||+.+.+.| ++...|..||+
T Consensus 244 ~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 244 MTPEAAREMQELIAG-SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cCHHHHHHHHHhccC-CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 467888888888877 589999999999888776 89999999984
No 70
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.87 E-value=0.0037 Score=59.70 Aligned_cols=63 Identities=22% Similarity=0.283 Sum_probs=52.1
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeCCCCCCCCCcc--HHHHHHHHHHHHhhhcCCC
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLKGGNHCDLELF--PEYLRHLKKFITSVEKSPS 64 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~gagH~~~~~~--pe~~~~l~~FL~~~~~s~~ 64 (169)
.|+|||+.|..|++.|+..|++.|..+ +.++++|+.+|....-. ..+...+..||..+...+.
T Consensus 685 ~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~~~ 752 (755)
T KOG2100|consen 685 LLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGSPV 752 (755)
T ss_pred EEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCccc
Confidence 499999999999999999999998864 36899999999976544 4777889999986555543
No 71
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=96.87 E-value=0.0013 Score=58.56 Aligned_cols=58 Identities=21% Similarity=0.295 Sum_probs=47.6
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHh---cCC-ccEEEeCCCCCCCCCcc----HHHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELC---QEK-YEPLWLKGGNHCDLELF----PEYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l---~~~-~el~~i~gagH~~~~~~----pe~~~~l~~FL~~ 58 (169)
|+|.|-|+.|.|+|+.+++.+.++| +.. +..+.++++||..+..- .+++..|.+||..
T Consensus 340 pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 340 ALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 7999999999999999999999997 432 34677779999876542 3788999999874
No 72
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.73 E-value=0.0027 Score=51.33 Aligned_cols=41 Identities=22% Similarity=0.238 Sum_probs=29.1
Q ss_pred CEEEEEeCCCCccCH-HHHHHHHHHhcCC-----ccEEEeCCCCCCC
Q 030906 1 MWLVVQGTADEVVDC-SHGRQLWELCQEK-----YEPLWLKGGNHCD 41 (169)
Q Consensus 1 PvLIIHG~~D~vVP~-~~s~~L~e~l~~~-----~el~~i~gagH~~ 41 (169)
|+|+|.|++|.+.|- .++..+.+.+... .+++.|++|||..
T Consensus 117 piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 117 PILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp EEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred CEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 799999999999996 4777777777653 3678899999984
No 73
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.72 E-value=0.0035 Score=55.26 Aligned_cols=61 Identities=10% Similarity=0.184 Sum_probs=54.0
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccHHHHHHHHHHHHhhhcCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFPEYLRHLKKFITSVEKSP 63 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~pe~~~~l~~FL~~~~~s~ 63 (169)
|.|||.|+.|+.-.++.+..+|..+++.+.+.++||++|.... ......|..|+..+....
T Consensus 264 PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--~~~~~~l~~f~~~~~~~~ 324 (367)
T PF10142_consen 264 PKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--SDVVQSLRAFYNRIQNGR 324 (367)
T ss_pred cEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch--HHHHHHHHHHHHHHHcCC
Confidence 7899999999999999999999999998789999999998755 777888999999876543
No 74
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=96.64 E-value=0.006 Score=58.38 Aligned_cols=60 Identities=22% Similarity=0.251 Sum_probs=45.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC---CccEEEeCCCCCCCCCcc--HHHHHHHHHHHHhhhc
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE---KYEPLWLKGGNHCDLELF--PEYLRHLKKFITSVEK 61 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~---~~el~~i~gagH~~~~~~--pe~~~~l~~FL~~~~~ 61 (169)
|+|+|||..|..|++.++..+|+.+.. +.+++ +..++|...... .++...+..||....+
T Consensus 457 PvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~-l~~g~H~~~~~~~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 457 SVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLF-LHQGGHVYPNNWQSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred CEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEE-EeCCCccCCCchhHHHHHHHHHHHHHhccc
Confidence 899999999999999999999999864 33454 445688654432 2677778888876543
No 75
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.57 E-value=0.0029 Score=57.31 Aligned_cols=60 Identities=18% Similarity=0.300 Sum_probs=47.4
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCC-----------ccEEEeCCCCCCCCCc--cH-HHHHHHHHHHHhhhc
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEK-----------YEPLWLKGGNHCDLEL--FP-EYLRHLKKFITSVEK 61 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~-----------~el~~i~gagH~~~~~--~p-e~~~~l~~FL~~~~~ 61 (169)
+|++||..|.+||+..+..+|+.+... +.|+.+||++|+.--. .+ ..+..|.+|+++-..
T Consensus 356 LI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~A 429 (474)
T PF07519_consen 356 LILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKA 429 (474)
T ss_pred EEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCC
Confidence 789999999999999999998876531 2588999999996433 22 788889999986443
No 76
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.51 E-value=0.0047 Score=50.40 Aligned_cols=55 Identities=25% Similarity=0.315 Sum_probs=43.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC---CccEEEeCCCCCCCCCccHHHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE---KYEPLWLKGGNHCDLELFPEYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~---~~el~~i~gagH~~~~~~pe~~~~l~~FL~~ 58 (169)
|+|..||+.|.+||+..++...+.+.. .+++..|+|.+|.. .++-+..|..|+..
T Consensus 146 ~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~---~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 146 PILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHST---SPQELDDLKSWIKT 203 (206)
T ss_pred hhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccc---cHHHHHHHHHHHHH
Confidence 689999999999999887777776654 35789999999975 34456667777765
No 77
>PRK10115 protease 2; Provisional
Probab=96.43 E-value=0.0082 Score=56.67 Aligned_cols=59 Identities=17% Similarity=0.050 Sum_probs=42.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEe---CCCCCCCCCccHHH---HHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWL---KGGNHCDLELFPEY---LRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i---~gagH~~~~~~pe~---~~~l~~FL~~~ 59 (169)
++||+||.+|.-||+.++.+++..+... .+++++ +++||......... ......||-..
T Consensus 608 ~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~ 675 (686)
T PRK10115 608 HLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIAL 675 (686)
T ss_pred ceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 1678899999999999999999999753 357777 99999854433222 33445565543
No 78
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=96.37 E-value=0.0067 Score=52.30 Aligned_cols=55 Identities=16% Similarity=0.033 Sum_probs=40.7
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccHHH-HHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFPEY-LRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~pe~-~~~l~~FL~~ 58 (169)
|+|+-.|-.|+++|++....+|..++.++++++++.+||.... ++ ......||.+
T Consensus 264 pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~---~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 264 PVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGP---EFQEDKQLNFLKE 319 (320)
T ss_dssp EEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTH---HHHHHHHHHHHHH
T ss_pred CEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchh---hHHHHHHHHHHhc
Confidence 7999999999999999999999999988899999999997533 33 5566667654
No 79
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.31 E-value=0.013 Score=48.64 Aligned_cols=59 Identities=17% Similarity=0.069 Sum_probs=45.8
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCc----cEEEeCCCCCCCCC-----ccH-------HHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKY----EPLWLKGGNHCDLE-----LFP-------EYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~----el~~i~gagH~~~~-----~~p-------e~~~~l~~FL~~~ 59 (169)
|||++.|+.|+++|+.....+-+.+.... ++.+|+|.+|..+. ..| +.++.+..||+.+
T Consensus 166 Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 166 PILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred CEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999998888888887643 48899999998652 112 4456677777654
No 80
>PRK10162 acetyl esterase; Provisional
Probab=96.19 E-value=0.012 Score=50.12 Aligned_cols=58 Identities=21% Similarity=0.221 Sum_probs=44.0
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeCCCCCCCCCc------cHHHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLKGGNHCDLEL------FPEYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~gagH~~~~~------~pe~~~~l~~FL~~~~ 60 (169)
|+||++|+.|.+++ .+..+++.+... +++++++|+.|..+.. ..+.+..+..||....
T Consensus 250 p~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 250 PCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred CeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 79999999999864 777888877653 4799999999975322 1266777888887653
No 81
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.14 E-value=0.015 Score=49.30 Aligned_cols=54 Identities=31% Similarity=0.314 Sum_probs=38.8
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHh-cCC---ccEEEeCCCCCCCCC--ccHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELC-QEK---YEPLWLKGGNHCDLE--LFPEYLRHLKK 54 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l-~~~---~el~~i~gagH~~~~--~~pe~~~~l~~ 54 (169)
|++|.||..|++||+.....+++.. ... .+++.+++++|.... ..+..+.+|.+
T Consensus 221 Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~ 280 (290)
T PF03583_consen 221 PVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDD 280 (290)
T ss_pred CEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHH
Confidence 8999999999999999888887754 332 357778999998532 23444444433
No 82
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=96.03 E-value=0.018 Score=44.12 Aligned_cols=42 Identities=12% Similarity=0.174 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHH
Q 030906 15 CSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFIT 57 (169)
Q Consensus 15 ~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~ 57 (169)
+..++.+.+.+++ .++++++++||+.+.+.+ ++...|.+||+
T Consensus 209 ~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 209 VQIAKEMQKLLPN-LTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred HHHHHHHHhcCCC-CcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 3667777777766 689999999999877766 78889999983
No 83
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.76 E-value=0.04 Score=45.37 Aligned_cols=60 Identities=10% Similarity=0.064 Sum_probs=48.5
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeCCCCCCCCC-------cc-----HHHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLKGGNHCDLE-------LF-----PEYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~gagH~~~~-------~~-----pe~~~~l~~FL~~~~ 60 (169)
|+|+++|+.|..+|...-..|...+... ..+.++++++|..+. .+ +.-|+.+..||....
T Consensus 160 pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 160 PVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred cEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999888888765 468899999997552 11 256888999998764
No 84
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.42 E-value=0.042 Score=45.93 Aligned_cols=57 Identities=18% Similarity=0.141 Sum_probs=48.3
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~ 58 (169)
|+.++.|.+|.+|..+......+...+..++.+|+ |||+.+.... ++...|.+++..
T Consensus 178 pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 178 PIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred ceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-CcceehhhhHHHHHHHHHHHhhh
Confidence 78999999999999999998888888767899998 6999877664 788888888753
No 85
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.40 E-value=0.032 Score=45.34 Aligned_cols=58 Identities=21% Similarity=0.276 Sum_probs=46.7
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC----ccEEEeCCCCCCCCCcc----HHHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK----YEPLWLKGGNHCDLELF----PEYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~----~el~~i~gagH~~~~~~----pe~~~~l~~FL~~ 58 (169)
++|-|-|+.|.|..+.+......+|.+- ..-++.+|+||+.++.- .++...|.+||..
T Consensus 136 aLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 136 ALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred eeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 4677999999999999999888888763 24677899999987653 3778889999864
No 86
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.18 E-value=0.09 Score=49.35 Aligned_cols=61 Identities=20% Similarity=0.182 Sum_probs=49.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCC------c----cH----HHHHHHHHHHHhhhc
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLE------L----FP----EYLRHLKKFITSVEK 61 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~------~----~p----e~~~~l~~FL~~~~~ 61 (169)
|||+|.|.+|..+++...+.+.+.+....+++|+.|++|..-. . +. .+.++|.+|+....+
T Consensus 306 PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt~~l~ 380 (784)
T KOG3253|consen 306 PVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTIALN 380 (784)
T ss_pred ceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHHHHHhhc
Confidence 8999999999999999999999999988899999999997521 1 11 345677777765444
No 87
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=94.90 E-value=0.028 Score=49.02 Aligned_cols=60 Identities=12% Similarity=0.117 Sum_probs=44.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCc----cHH--HHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLEL----FPE--YLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~----~pe--~~~~l~~FL~~~~ 60 (169)
|+||||..+|+++++...-.+....+....+..-+-|||..+.. .+. ..+.|.+||+...
T Consensus 276 PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 276 PTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred ceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 89999999999999987776665444436788889999986443 343 3457888887543
No 88
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=94.21 E-value=0.054 Score=46.78 Aligned_cols=57 Identities=14% Similarity=0.189 Sum_probs=42.9
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC-------------------------ccEEEeCCCCCCCCCccH-HHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK-------------------------YEPLWLKGGNHCDLELFP-EYLRHLKK 54 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~-------------------------~el~~i~gagH~~~~~~p-e~~~~l~~ 54 (169)
+|||.+|..|-+||+-..+...+.+.=. -.++++.||||+...+.| ..+..|..
T Consensus 332 rVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~~~ 411 (415)
T PF00450_consen 332 RVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMFRR 411 (415)
T ss_dssp EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHHHH
T ss_pred eeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHHHH
Confidence 4899999999999999999988876521 137889999999777777 77889999
Q ss_pred HHH
Q 030906 55 FIT 57 (169)
Q Consensus 55 FL~ 57 (169)
||.
T Consensus 412 fl~ 414 (415)
T PF00450_consen 412 FLK 414 (415)
T ss_dssp HHC
T ss_pred Hhc
Confidence 985
No 89
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.18 E-value=0.15 Score=43.69 Aligned_cols=57 Identities=18% Similarity=0.153 Sum_probs=45.5
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC-----------------------C-ccEEEeCCCCCCCCCccH-HHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE-----------------------K-YEPLWLKGGNHCDLELFP-EYLRHLKKF 55 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~-----------------------~-~el~~i~gagH~~~~~~p-e~~~~l~~F 55 (169)
+|||..|..|-+||+-..+.....+.= . -.++++-||||+... .| ..+..+..|
T Consensus 235 ~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~-qP~~al~m~~~f 313 (319)
T PLN02213 235 RSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEY-RPNETFIMFQRW 313 (319)
T ss_pred eEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCc-CHHHHHHHHHHH
Confidence 589999999999999988888877751 0 246678899999854 56 778889999
Q ss_pred HHh
Q 030906 56 ITS 58 (169)
Q Consensus 56 L~~ 58 (169)
|..
T Consensus 314 i~~ 316 (319)
T PLN02213 314 ISG 316 (319)
T ss_pred HcC
Confidence 864
No 90
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=94.18 E-value=0.024 Score=48.81 Aligned_cols=57 Identities=19% Similarity=0.092 Sum_probs=7.9
Q ss_pred CEEEEEeCCCCccCHH-HHHHHHHHhcCCc-------cEEEeCCCCCCCCCcc-----HHHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCS-HGRQLWELCQEKY-------EPLWLKGGNHCDLELF-----PEYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~-~s~~L~e~l~~~~-------el~~i~gagH~~~~~~-----pe~~~~l~~FL~ 57 (169)
|+||+.|.+|+.||.. .-+.|.+...... ..-+|+||+|..-... ..+.+.|..||+
T Consensus 234 plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 234 PLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -EEEEEE--TT-----------------------------------------------------------
T ss_pred ceEEEecCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 8999999999999975 4445555544322 1347999999864322 256778888874
No 91
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=94.06 E-value=0.078 Score=49.23 Aligned_cols=40 Identities=18% Similarity=0.048 Sum_probs=34.8
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCD 41 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~ 41 (169)
|+|+|.|..|.|||+..+..+.+++...++++.. .+||..
T Consensus 443 Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~-~gGHIg 482 (560)
T TIGR01839 443 DSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLS-NSGHIQ 482 (560)
T ss_pred CeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEec-CCCccc
Confidence 8999999999999999999999999876666666 578973
No 92
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=94.04 E-value=0.11 Score=46.93 Aligned_cols=58 Identities=12% Similarity=0.104 Sum_probs=46.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhc-------------------C---------------CccEEEeCCCCCCCCCccH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQ-------------------E---------------KYEPLWLKGGNHCDLELFP 46 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~-------------------~---------------~~el~~i~gagH~~~~~~p 46 (169)
+|||+.|..|-+||+...+.+...++ + ...++++.+|||+...+.|
T Consensus 366 kVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d~P 445 (462)
T PTZ00472 366 RVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMDQP 445 (462)
T ss_pred eEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhhHH
Confidence 58999999999999988887777664 0 0125667899999888877
Q ss_pred -HHHHHHHHHHHh
Q 030906 47 -EYLRHLKKFITS 58 (169)
Q Consensus 47 -e~~~~l~~FL~~ 58 (169)
..+..|..||..
T Consensus 446 ~~~~~~i~~fl~~ 458 (462)
T PTZ00472 446 AVALTMINRFLRN 458 (462)
T ss_pred HHHHHHHHHHHcC
Confidence 788899999864
No 93
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=93.42 E-value=0.12 Score=43.41 Aligned_cols=55 Identities=18% Similarity=0.256 Sum_probs=46.6
Q ss_pred EEEEEeC------CCCccCHHHHHHHHHHhcCCc---cEEEeC--CCCCCCCCccHHHHHHHHHHH
Q 030906 2 WLVVQGT------ADEVVDCSHGRQLWELCQEKY---EPLWLK--GGNHCDLELFPEYLRHLKKFI 56 (169)
Q Consensus 2 vLIIHG~------~D~vVP~~~s~~L~e~l~~~~---el~~i~--gagH~~~~~~pe~~~~l~~FL 56 (169)
||-|.|. .|.+||...+..|..+++... .-+.|. +|.|..+.+.+++...|.+||
T Consensus 187 VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 187 VLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQVDKLIIQFL 252 (255)
T ss_dssp EEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHHHHHHHHHHH
T ss_pred EEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCHHHHHHHHHHh
Confidence 7899998 899999999999999887643 344554 479999999999999999998
No 94
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=93.25 E-value=0.15 Score=44.75 Aligned_cols=54 Identities=17% Similarity=0.129 Sum_probs=43.3
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCC--CccHHHHHHHHHHHH
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDL--ELFPEYLRHLKKFIT 57 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~--~~~pe~~~~l~~FL~ 57 (169)
+.++.+++|..||......|.+..++ +++-+++| ||... .....|-+.|.+-|+
T Consensus 292 ii~V~A~~DaYVPr~~v~~Lq~~WPG-sEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 292 IIFVAAKNDAYVPRHGVLSLQEIWPG-SEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred EEEEEecCceEechhhcchHHHhCCC-CeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 68899999999999999999999988 79999986 99753 334467777766553
No 95
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=93.16 E-value=0.15 Score=40.92 Aligned_cols=39 Identities=26% Similarity=0.334 Sum_probs=30.9
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCD 41 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~ 41 (169)
|+||+||+.|.+-..+..-. | .+....+++|++++.|..
T Consensus 144 Ptli~qGtrD~fGtr~~Va~-y-~ls~~iev~wl~~adHDL 182 (213)
T COG3571 144 PTLITQGTRDEFGTRDEVAG-Y-ALSDPIEVVWLEDADHDL 182 (213)
T ss_pred CeEEeecccccccCHHHHHh-h-hcCCceEEEEeccCcccc
Confidence 89999999999888776632 2 244447999999999975
No 96
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=92.95 E-value=0.11 Score=40.94 Aligned_cols=30 Identities=10% Similarity=0.113 Sum_probs=26.5
Q ss_pred ccEEEeCCCCCCCCCccH-HHHHHHHHHHHh
Q 030906 29 YEPLWLKGGNHCDLELFP-EYLRHLKKFITS 58 (169)
Q Consensus 29 ~el~~i~gagH~~~~~~p-e~~~~l~~FL~~ 58 (169)
.++++++||||..+++.| ++.+.|..||..
T Consensus 211 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 211 LPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred CeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 579999999999988887 788899999975
No 97
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=92.52 E-value=0.32 Score=40.79 Aligned_cols=55 Identities=22% Similarity=0.120 Sum_probs=39.8
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeCCCCCCCCC-ccH---HHHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLKGGNHCDLE-LFP---EYLRHLKKFIT 57 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~gagH~~~~-~~p---e~~~~l~~FL~ 57 (169)
|+||++|+.|.+.+ .+..+.+.+... .+++.++|+.|.... ..+ ..+..+..||.
T Consensus 247 P~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 247 PTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred CEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcceeccccCcHHHHHHHHHHHHHHH
Confidence 89999999999988 777777777653 378999999996522 223 33455666665
No 98
>PLN00021 chlorophyllase
Probab=92.49 E-value=0.1 Score=44.85 Aligned_cols=42 Identities=14% Similarity=0.169 Sum_probs=32.9
Q ss_pred CEEEEEeCCCC-----ccC----HH-HHHHHHHHhcCCccEEEeCCCCCCCC
Q 030906 1 MWLVVQGTADE-----VVD----CS-HGRQLWELCQEKYEPLWLKGGNHCDL 42 (169)
Q Consensus 1 PvLIIHG~~D~-----vVP----~~-~s~~L~e~l~~~~el~~i~gagH~~~ 42 (169)
|+|||+|..|. ++| .. +-..+++.++.++.+++++++||+.+
T Consensus 191 P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~ 242 (313)
T PLN00021 191 PVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDM 242 (313)
T ss_pred CeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCccee
Confidence 89999999763 333 43 44778888988778889999999976
No 99
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=92.11 E-value=0.47 Score=42.65 Aligned_cols=57 Identities=18% Similarity=0.149 Sum_probs=45.6
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC------------------------ccEEEeCCCCCCCCCccH-HHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK------------------------YEPLWLKGGNHCDLELFP-EYLRHLKKF 55 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~------------------------~el~~i~gagH~~~~~~p-e~~~~l~~F 55 (169)
+|||..|..|-+||+-..+.....+.=. -.++++-||||+... .| ..+..+..|
T Consensus 349 rVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~-qP~~al~m~~~F 427 (433)
T PLN03016 349 RSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEY-RPNETFIMFQRW 427 (433)
T ss_pred eEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCC-CHHHHHHHHHHH
Confidence 5899999999999999988888776510 136778899999854 56 778889999
Q ss_pred HHh
Q 030906 56 ITS 58 (169)
Q Consensus 56 L~~ 58 (169)
|..
T Consensus 428 i~~ 430 (433)
T PLN03016 428 ISG 430 (433)
T ss_pred HcC
Confidence 864
No 100
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=91.74 E-value=0.4 Score=45.51 Aligned_cols=57 Identities=25% Similarity=0.244 Sum_probs=46.1
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeCCCCCCCCCc--cHHHHHHHHHHHHh
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLKGGNHCDLEL--FPEYLRHLKKFITS 58 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~gagH~~~~~--~pe~~~~l~~FL~~ 58 (169)
+|++||--|+-|.+.|.-.|...|-.+ +++++||+..|+.-.. ..-|-..|..||++
T Consensus 805 LlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 805 LLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred EEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 689999999999999999998877543 5899999999986332 23556688999875
No 101
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=91.57 E-value=0.43 Score=43.34 Aligned_cols=59 Identities=17% Similarity=0.111 Sum_probs=45.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC------------------------ccEEEeCCCCCCCCCccH-HHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK------------------------YEPLWLKGGNHCDLELFP-EYLRHLKKF 55 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~------------------------~el~~i~gagH~~~~~~p-e~~~~l~~F 55 (169)
++||+.|+.|-+||+-..+...+.+.-. ..+..+.||||+.....| .....+..|
T Consensus 365 rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~f 444 (454)
T KOG1282|consen 365 RVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQRF 444 (454)
T ss_pred EEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHHH
Confidence 5899999999999998888865544321 024667899999877776 677899999
Q ss_pred HHhh
Q 030906 56 ITSV 59 (169)
Q Consensus 56 L~~~ 59 (169)
|...
T Consensus 445 l~g~ 448 (454)
T KOG1282|consen 445 LNGQ 448 (454)
T ss_pred HcCC
Confidence 9764
No 102
>PLN02209 serine carboxypeptidase
Probab=91.32 E-value=0.64 Score=41.90 Aligned_cols=57 Identities=18% Similarity=0.215 Sum_probs=45.7
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC------------------------ccEEEeCCCCCCCCCccH-HHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK------------------------YEPLWLKGGNHCDLELFP-EYLRHLKKF 55 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~------------------------~el~~i~gagH~~~~~~p-e~~~~l~~F 55 (169)
+|||+.|..|-+||+-..+.....+.=. -.++++-||||+.. ..| ..+..+..|
T Consensus 353 rVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~~f 431 (437)
T PLN02209 353 RSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQRW 431 (437)
T ss_pred eEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHHHH
Confidence 5899999999999999888888877610 13677889999985 466 788899999
Q ss_pred HHh
Q 030906 56 ITS 58 (169)
Q Consensus 56 L~~ 58 (169)
|..
T Consensus 432 i~~ 434 (437)
T PLN02209 432 ISG 434 (437)
T ss_pred HcC
Confidence 854
No 103
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=89.88 E-value=0.19 Score=44.90 Aligned_cols=43 Identities=7% Similarity=0.030 Sum_probs=38.9
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLE 43 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~ 43 (169)
|-.|+.|+.|+..+++.+..+|..+|+.+-|..+|++.|....
T Consensus 331 pKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n 373 (507)
T COG4287 331 PKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN 373 (507)
T ss_pred cceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH
Confidence 5689999999999999999999999997778899999998754
No 104
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=89.59 E-value=0.5 Score=42.60 Aligned_cols=62 Identities=11% Similarity=0.087 Sum_probs=45.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCc----cH--HHHH----HHHHHHHhhhcCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLEL----FP--EYLR----HLKKFITSVEKSP 63 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~----~p--e~~~----~l~~FL~~~~~s~ 63 (169)
|++++.|.+|.|+|++.......++++.++++ +-++||....- .+ .++. ....||..-..-|
T Consensus 332 pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~-l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~~~ 403 (445)
T COG3243 332 PVYNLAAEEDHIAPWSSVYLGARLLGGEVTFV-LSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKEHP 403 (445)
T ss_pred ceEEEeecccccCCHHHHHHHHHhcCCceEEE-EecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhccCC
Confidence 89999999999999999999999998855554 45689974322 12 4555 6677776544443
No 105
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=89.36 E-value=1.2 Score=39.47 Aligned_cols=58 Identities=19% Similarity=-0.005 Sum_probs=47.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEe-CCCCCCCCCc-cHHHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWL-KGGNHCDLEL-FPEYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i-~gagH~~~~~-~pe~~~~l~~FL~~ 58 (169)
|+||+-=+.|.+.|++....+.+.++....++.| ...||..+.. .+.+...|..||..
T Consensus 308 ~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 308 PVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred CEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 7999999999999999999999999986545444 5679976544 45777999999975
No 106
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=89.11 E-value=0.95 Score=38.46 Aligned_cols=44 Identities=18% Similarity=0.135 Sum_probs=32.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC-ccEEEeCCCCCCCCCc
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK-YEPLWLKGGNHCDLEL 44 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~-~el~~i~gagH~~~~~ 44 (169)
|++.+++.+|.-|.......+...+... +++|.++|++|...+.
T Consensus 197 P~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~en 241 (294)
T PF02273_consen 197 PFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLGEN 241 (294)
T ss_dssp -EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TTSS
T ss_pred CEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhhhC
Confidence 8999999999999999999998877653 4799999999986553
No 107
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.91 E-value=0.83 Score=39.32 Aligned_cols=58 Identities=22% Similarity=0.264 Sum_probs=46.5
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCC--ccHHHHHHHHHHHHhhhc
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLE--LFPEYLRHLKKFITSVEK 61 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~--~~pe~~~~l~~FL~~~~~ 61 (169)
++++.+++|..||-.....|.+.-|+ +++-+++ +||...+ .+..|-..|.+-|..+.+
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg-~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPG-CEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCC-CEEEEee-cCceeeeehhchHHHHHHHHHHHhhhh
Confidence 57889999999999777788777788 7888888 8997533 455788889888887664
No 108
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=88.59 E-value=0.25 Score=46.33 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=32.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC----C---ccEEEeCCCCCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE----K---YEPLWLKGGNHCD 41 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~----~---~el~~i~gagH~~ 41 (169)
|++|+||..|.++|+.|+-+-|-.+.. . ..+|.+.++-|++
T Consensus 557 PaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfD 604 (690)
T PF10605_consen 557 PAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFD 604 (690)
T ss_pred ceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeech
Confidence 899999999999999877666554432 1 2478899999986
No 109
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=88.20 E-value=1.7 Score=40.91 Aligned_cols=59 Identities=20% Similarity=0.095 Sum_probs=44.7
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCc---cEEEeCCCCCCCCCccH---HHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKY---EPLWLKGGNHCDLELFP---EYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~---el~~i~gagH~~~~~~p---e~~~~l~~FL~~~ 59 (169)
|+||-.|+.|.-|-|.||..++..|+... -++.-.++||+.-.... .....+..||.+.
T Consensus 582 ~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~ 646 (648)
T COG1505 582 PTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRT 646 (648)
T ss_pred CeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHh
Confidence 79999999999999999999999998643 24445689998754432 4556677777653
No 110
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=88.01 E-value=0.69 Score=38.99 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=27.2
Q ss_pred hcCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHh
Q 030906 25 CQEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITS 58 (169)
Q Consensus 25 l~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~ 58 (169)
+.....+++++|+||+.+.+.| ++...|.+||..
T Consensus 336 l~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 336 LPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred ccCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 3334678999999999887776 788899999864
No 111
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=85.82 E-value=3.3 Score=31.44 Aligned_cols=18 Identities=11% Similarity=0.028 Sum_probs=16.0
Q ss_pred ccEEEeCCCCCCCCCccH
Q 030906 29 YEPLWLKGGNHCDLELFP 46 (169)
Q Consensus 29 ~el~~i~gagH~~~~~~p 46 (169)
+++++++++||+.+.+.|
T Consensus 217 ~~~~~~~~~gH~~~~e~p 234 (245)
T TIGR01738 217 SELYIFAKAAHAPFLSHA 234 (245)
T ss_pred CeEEEeCCCCCCccccCH
Confidence 689999999999888777
No 112
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=85.76 E-value=1.9 Score=37.14 Aligned_cols=43 Identities=14% Similarity=-0.123 Sum_probs=37.7
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLE 43 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~ 43 (169)
|+|+.-|--|+++|++.--.+|+.+...+++-+++--+|..+.
T Consensus 261 pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~p 303 (321)
T COG3458 261 PVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGGP 303 (321)
T ss_pred ceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccCc
Confidence 8999999999999999999999999987777778777787543
No 113
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.11 E-value=2.9 Score=36.85 Aligned_cols=67 Identities=24% Similarity=0.314 Sum_probs=52.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCc---cEEEeCCCCCCCCCc-cH-HHHHHHHHHHHhhhcCCCCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKY---EPLWLKGGNHCDLEL-FP-EYLRHLKKFITSVEKSPSRRS 67 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~---el~~i~gagH~~~~~-~p-e~~~~l~~FL~~~~~s~~~~~ 67 (169)
+.|.+.|..|.|+|....+.+.+...... ..+-+.++-|..+.. +| .|++.+.+||.....+..+.+
T Consensus 227 ~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~~~~~ 298 (350)
T KOG2521|consen 227 NQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSYNLKN 298 (350)
T ss_pred cceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccccCCcc
Confidence 35778899999999999999977665532 345577899987553 45 899999999999888776654
No 114
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=84.76 E-value=1.2 Score=35.86 Aligned_cols=49 Identities=14% Similarity=0.087 Sum_probs=38.3
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeCCCCCCCCCc-cHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLKGGNHCDLEL-FPEYL 49 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~gagH~~~~~-~pe~~ 49 (169)
|-|+|++++|.+||+...+.+.+..... .....+++.+|..+.. +|+-.
T Consensus 180 p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y 232 (240)
T PF05705_consen 180 PRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRY 232 (240)
T ss_pred CeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHH
Confidence 6799999999999999999988877653 2466789999987653 45443
No 115
>COG4099 Predicted peptidase [General function prediction only]
Probab=83.99 E-value=0.53 Score=41.07 Aligned_cols=43 Identities=23% Similarity=0.275 Sum_probs=33.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCc------c----EEEeCCCCCCCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKY------E----PLWLKGGNHCDLE 43 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~------e----l~~i~gagH~~~~ 43 (169)
|+.|+|+.+|.++|.+++.-+++.++.-. + ..+.+|-.|...|
T Consensus 317 piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~~g~~~~eG~d~~g~w 369 (387)
T COG4099 317 PIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFLEGTTVLEGVDHSGVW 369 (387)
T ss_pred ceEEEEecCCCccccCcceeehHHHHhhccccchhhhhhccccccccCCCCcc
Confidence 78999999999999999999998887521 1 2455677776654
No 116
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=83.23 E-value=2.1 Score=37.37 Aligned_cols=57 Identities=21% Similarity=0.112 Sum_probs=41.0
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeCCCCCCCCCcc------HHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLKGGNHCDLELF------PEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~gagH~~~~~~------pe~~~~l~~FL~~~ 59 (169)
|+||+.+..|.+. ..+..+++.+... .+++.++++.|..+... .+++..+..||...
T Consensus 270 ~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 270 PTLVVVAGYDVLR--DEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred ceEEEEeCchhhh--hhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 5899999999886 6666677776643 35778999999753221 26777888888753
No 117
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=80.98 E-value=2.2 Score=38.36 Aligned_cols=62 Identities=13% Similarity=0.058 Sum_probs=39.4
Q ss_pred CEEEEEeCCCCccCHH-HHHHHHHHhcCCccEEEeCCCCCCCCCc----cH-HHHHH-HHHHHHhhhcCC
Q 030906 1 MWLVVQGTADEVVDCS-HGRQLWELCQEKYEPLWLKGGNHCDLEL----FP-EYLRH-LKKFITSVEKSP 63 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~-~s~~L~e~l~~~~el~~i~gagH~~~~~----~p-e~~~~-l~~FL~~~~~s~ 63 (169)
|+|+|+..+|.++|.. --......-++ .-+++-.-|||..+.+ .+ .+... +.+|+....-..
T Consensus 324 P~L~ina~DDPv~p~~~ip~~~~~~np~-v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~~~ 392 (409)
T KOG1838|consen 324 PLLCINAADDPVVPEEAIPIDDIKSNPN-VLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIFQD 392 (409)
T ss_pred cEEEEecCCCCCCCcccCCHHHHhcCCc-EEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHhhh
Confidence 8999999999999985 22222222222 3466677899986433 22 45555 888887655433
No 118
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=79.72 E-value=2.4 Score=38.13 Aligned_cols=54 Identities=20% Similarity=0.348 Sum_probs=36.6
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCC-CCCCCccHHHHHHHHHHHHh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGN-HCDLELFPEYLRHLKKFITS 58 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gag-H~~~~~~pe~~~~l~~FL~~ 58 (169)
|+|.|.|++|.++|.+...-++..-.. .+...|+... |+. ++.-+..+.+||+.
T Consensus 354 plL~i~~~~D~v~P~eD~~lia~~s~~-gk~~~~~~~~~~~g---y~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 354 PLLAINGEDDPVSPIEDSRLIAESSTD-GKALRIPSKPLHMG---YPQALDEIYKWLED 408 (411)
T ss_dssp -EEEEEETT-SSS-HHHHHHHHHTBTT--EEEEE-SSSHHHH---HHHHHHHHHHHHHH
T ss_pred ceEEeecCCCCCCCHHHHHHHHhcCCC-CceeecCCCccccc---hHHHHHHHHHHHHH
Confidence 899999999999999999998876655 4666666444 443 45666777777764
No 119
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=75.54 E-value=7.3 Score=34.94 Aligned_cols=60 Identities=15% Similarity=-0.022 Sum_probs=46.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCcc--EEEeCCCCCCCCCc----cHHHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYE--PLWLKGGNHCDLEL----FPEYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~e--l~~i~gagH~~~~~----~pe~~~~l~~FL~~~~ 60 (169)
||.+++|..|.++.++....++..+++... .+.+++-+|.++.. ...++..|.++|....
T Consensus 334 P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 334 PTALYYGDNDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred CEEEEecCCcccCCHHHHHHHHHhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 899999999999999999988888877543 33389999987432 2367777777777554
No 120
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=71.78 E-value=13 Score=31.81 Aligned_cols=57 Identities=19% Similarity=0.263 Sum_probs=44.8
Q ss_pred EEEEEeCC------CCccCHHHHHHHHHHhcCCcc-----EEEeCCCCCCCCCccHHHHHHHHHHHHh
Q 030906 2 WLVVQGTA------DEVVDCSHGRQLWELCQEKYE-----PLWLKGGNHCDLELFPEYLRHLKKFITS 58 (169)
Q Consensus 2 vLIIHG~~------D~vVP~~~s~~L~e~l~~~~e-----l~~i~gagH~~~~~~pe~~~~l~~FL~~ 58 (169)
+|+|.|+- |..||...+..++.++++... ++.=+.|.|.-+.+.+.....+..||-.
T Consensus 219 vl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~v~~yv~~FLw~ 286 (288)
T COG4814 219 VLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPTVAKYVKNFLWE 286 (288)
T ss_pred EEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChhHHHHHHHHhhc
Confidence 67888864 678999999999998887532 3333568999999999999999999853
No 121
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=71.77 E-value=5.9 Score=34.71 Aligned_cols=62 Identities=16% Similarity=0.288 Sum_probs=47.5
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCCc----cEEEeCCCCCCCCCcc----HHHHHHHHHHHHhhhcCC
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEKY----EPLWLKGGNHCDLELF----PEYLRHLKKFITSVEKSP 63 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~~----el~~i~gagH~~~~~~----pe~~~~l~~FL~~~~~s~ 63 (169)
+|-|-|++|.|--..+.+....+|.+-- ..+.-+++||...+.- .++...|.+|+....++.
T Consensus 342 L~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~~ 411 (415)
T COG4553 342 LFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDRSN 411 (415)
T ss_pred EEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCccc
Confidence 4678999999999988888877776531 3567799999976653 367789999998876543
No 122
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=71.22 E-value=12 Score=32.16 Aligned_cols=58 Identities=16% Similarity=0.085 Sum_probs=42.6
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC-ccEEEeCCCCCCCCCccH-HHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK-YEPLWLKGGNHCDLELFP-EYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~-~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~~ 60 (169)
|||+|.|+.-.. .+.+..+...+... ..++.+++||=..+++.| .+...+.-||+.+.
T Consensus 221 ~vLlvvG~~Sp~--~~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~G 280 (283)
T PF03096_consen 221 PVLLVVGDNSPH--VDDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMG 280 (283)
T ss_dssp -EEEEEETTSTT--HHHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTT
T ss_pred CeEEEEecCCcc--hhhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccCC
Confidence 799999997543 56778888888653 368899999988888887 88889999998653
No 123
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=70.78 E-value=11 Score=31.94 Aligned_cols=56 Identities=9% Similarity=-0.016 Sum_probs=43.3
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCc-cEEEeCCC----CCCCCCccH--HHHHHHHHHH
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKY-EPLWLKGG----NHCDLELFP--EYLRHLKKFI 56 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~-el~~i~ga----gH~~~~~~p--e~~~~l~~FL 56 (169)
|++.+-..+|.-+|+.....|.....++. +...++.+ ||+.....+ ..++.+..|+
T Consensus 218 Pi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 218 PITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred ceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 88999999999999999999999888742 56666655 999876653 5666666554
No 124
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=65.95 E-value=11 Score=35.10 Aligned_cols=66 Identities=12% Similarity=0.087 Sum_probs=41.1
Q ss_pred CEEEEEeCCCCccCHHHHHHH----H---HHhcCCcc---EEEeCCCCCCCCCccH----HHHHHHHHHHHhhhcCCCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQL----W---ELCQEKYE---PLWLKGGNHCDLELFP----EYLRHLKKFITSVEKSPSRR 66 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L----~---e~l~~~~e---l~~i~gagH~~~~~~p----e~~~~l~~FL~~~~~s~~~~ 66 (169)
|++|+.|..|.|+|+.++..- | +.+..... +.+-+..||..++-.. .-...|..-|+.++..|+.-
T Consensus 299 Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFVS~~VarkEH~~i~~~ld~Ie~LpPGL 378 (581)
T PF11339_consen 299 PIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIFVSGKVARKEHREIASNLDLIEALPPGL 378 (581)
T ss_pred CEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEEeccHhhHHHHHHHHHHHHHHhccCCcc
Confidence 899999999999999988422 1 12222222 3345789998766543 22234555566677666543
No 125
>PRK10673 acyl-CoA esterase; Provisional
Probab=65.69 E-value=30 Score=27.08 Aligned_cols=56 Identities=13% Similarity=0.089 Sum_probs=33.9
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCC-----CCccHHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCD-----LELFPEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~-----~~~~pe~~~~l~~FL~~~ 59 (169)
|++++||-.... ..-..+...+.....++.++--||.. .+....+.+.|..+|+.+
T Consensus 18 ~iv~lhG~~~~~---~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l 78 (255)
T PRK10673 18 PIVLVHGLFGSL---DNLGVLARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDAL 78 (255)
T ss_pred CEEEECCCCCch---hHHHHHHHHHhhCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHc
Confidence 689999976653 22233444454446777777777752 122346666777777753
No 126
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=61.89 E-value=31 Score=31.04 Aligned_cols=61 Identities=10% Similarity=0.153 Sum_probs=42.1
Q ss_pred EEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEe-----------CCCCCCC-CCccHHHHHHHHHHHHhhhcCC
Q 030906 3 LVVQGTADEVVDCSHGRQLWELCQEK---YEPLWL-----------KGGNHCD-LELFPEYLRHLKKFITSVEKSP 63 (169)
Q Consensus 3 LIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i-----------~gagH~~-~~~~pe~~~~l~~FL~~~~~s~ 63 (169)
+.+|+..|..+|++.-+.|++.+.+. ++++.+ .+..|+. +....-|.+.|-..|+++...+
T Consensus 297 vsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek~~~~~ 372 (403)
T PF11144_consen 297 VSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEKLQGRK 372 (403)
T ss_pred EEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHHHhhccc
Confidence 56899999999999999999988763 466666 5667864 3333345556666666544433
No 127
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=61.15 E-value=34 Score=27.83 Aligned_cols=57 Identities=14% Similarity=0.078 Sum_probs=35.3
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCC-------------CccHHHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDL-------------ELFPEYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~-------------~~~pe~~~~l~~FL~~~~ 60 (169)
|+|++||..... ..-..+...+...+.++.++--||+.- +....+...|..||..+.
T Consensus 31 ~vlllHG~~~~~---~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~ 100 (294)
T PLN02824 31 ALVLVHGFGGNA---DHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVV 100 (294)
T ss_pred eEEEECCCCCCh---hHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhc
Confidence 689999986543 233334445554466777776666531 122477788888887643
No 128
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=60.14 E-value=14 Score=32.91 Aligned_cols=49 Identities=12% Similarity=0.111 Sum_probs=31.3
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCC---ccEEEeCCCCCCCCCccHHHHHHH
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEK---YEPLWLKGGNHCDLELFPEYLRHL 52 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~---~el~~i~gagH~~~~~~pe~~~~l 52 (169)
++|-+|+.|..+ +...+.|++.+... +.+.+++| ||........+...|
T Consensus 352 ~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~~~Wr~~L~~~L 403 (411)
T PRK10439 352 IVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHDALCWRGGLIQGL 403 (411)
T ss_pred EEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcCHHHHHHHHHHHH
Confidence 567789988654 56778888888754 35677775 796543333333333
No 129
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=60.14 E-value=37 Score=27.35 Aligned_cols=57 Identities=11% Similarity=0.106 Sum_probs=36.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCC------ccHHHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLE------LFPEYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~------~~pe~~~~l~~FL~~~~ 60 (169)
|++++||-....- .-..+.+.+...+.++.++--||..-. ..+.+.+.+.+||+.+.
T Consensus 27 plvllHG~~~~~~---~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~ 89 (276)
T TIGR02240 27 PLLIFNGIGANLE---LVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD 89 (276)
T ss_pred cEEEEeCCCcchH---HHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC
Confidence 7999999765432 223444555554678888877887421 23467777888887653
No 130
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=57.93 E-value=34 Score=23.16 Aligned_cols=53 Identities=25% Similarity=0.413 Sum_probs=31.6
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHh-cCCccEEEeCCCCCCCCC-------ccHHHHHHHHHHHH
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELC-QEKYEPLWLKGGNHCDLE-------LFPEYLRHLKKFIT 57 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l-~~~~el~~i~gagH~~~~-------~~pe~~~~l~~FL~ 57 (169)
|+|+||..+..--+.+ |++.+ .+...++.++--||..-. ....+++.|..|++
T Consensus 19 v~i~HG~~eh~~ry~~---~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 19 VVIVHGFGEHSGRYAH---LAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEeCCcHHHHHHHHH---HHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 6899999765443322 22333 233567888888887422 22467777777763
No 131
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=56.13 E-value=17 Score=30.43 Aligned_cols=41 Identities=17% Similarity=0.155 Sum_probs=35.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDL 42 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~ 42 (169)
|+||+.|.+|.---+++.+.+...+.. +.+..|+|.+|..+
T Consensus 209 ~ilVv~~~~espklieQnrdf~~q~~~-a~~~~f~n~~hy~I 249 (270)
T KOG4627|consen 209 WILVVAAEHESPKLIEQNRDFADQLRK-ASFTLFKNYDHYDI 249 (270)
T ss_pred eeeEeeecccCcHHHHhhhhHHHHhhh-cceeecCCcchhhH
Confidence 689999999988778999998888777 67999999999864
No 132
>PLN02578 hydrolase
Probab=53.66 E-value=66 Score=27.35 Aligned_cols=58 Identities=16% Similarity=0.048 Sum_probs=36.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCC------ccHHHHHHHHHHHHhhhc
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLE------LFPEYLRHLKKFITSVEK 61 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~------~~pe~~~~l~~FL~~~~~ 61 (169)
|+|+|||-... ..+-..+...+...+.++.++-.||..-. ....+...|.+|++.+..
T Consensus 88 ~vvliHG~~~~---~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~ 151 (354)
T PLN02578 88 PIVLIHGFGAS---AFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVK 151 (354)
T ss_pred eEEEECCCCCC---HHHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhcc
Confidence 78999998764 22223334445444678888877886421 123566788888887643
No 133
>PRK11071 esterase YqiA; Provisional
Probab=52.55 E-value=19 Score=28.18 Aligned_cols=28 Identities=25% Similarity=0.466 Sum_probs=21.6
Q ss_pred ccEEEeCCCCCCCCCccHHHHHHHHHHHH
Q 030906 29 YEPLWLKGGNHCDLELFPEYLRHLKKFIT 57 (169)
Q Consensus 29 ~el~~i~gagH~~~~~~pe~~~~l~~FL~ 57 (169)
+.+++++||+|..- ...+++..+.+||.
T Consensus 162 ~~~~~~~ggdH~f~-~~~~~~~~i~~fl~ 189 (190)
T PRK11071 162 CRQTVEEGGNHAFV-GFERYFNQIVDFLG 189 (190)
T ss_pred cceEEECCCCcchh-hHHHhHHHHHHHhc
Confidence 35778899999862 23688899999975
No 134
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=51.62 E-value=16 Score=30.88 Aligned_cols=45 Identities=16% Similarity=0.079 Sum_probs=31.5
Q ss_pred CEEEEEeCCCC---------ccCH-HHHHHHHHHhcCCccEEEeCCCCCCCCCcc
Q 030906 1 MWLVVQGTADE---------VVDC-SHGRQLWELCQEKYEPLWLKGGNHCDLELF 45 (169)
Q Consensus 1 PvLIIHG~~D~---------vVP~-~~s~~L~e~l~~~~el~~i~gagH~~~~~~ 45 (169)
|+|||-..-.. -+|. .+-.++|+.++.+.-.+++.++||+.+.+.
T Consensus 156 P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd 210 (259)
T PF12740_consen 156 PALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDD 210 (259)
T ss_pred CeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcC
Confidence 78888555553 2232 366778888888766778899999976554
No 135
>PRK04940 hypothetical protein; Provisional
Probab=51.31 E-value=38 Score=27.09 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=24.3
Q ss_pred HHhcCCccEEEeCCCCCCCCCccHHHHHHHHHHHH
Q 030906 23 ELCQEKYEPLWLKGGNHCDLELFPEYLRHLKKFIT 57 (169)
Q Consensus 23 e~l~~~~el~~i~gagH~~~~~~pe~~~~l~~FL~ 57 (169)
+.+.+.+..++.+||.|. +...+.++..|..|+.
T Consensus 145 ~~y~~~y~~~v~~GGdH~-f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 145 EELHPYYEIVWDEEQTHK-FKNISPHLQRIKAFKT 178 (180)
T ss_pred HHhccCceEEEECCCCCC-CCCHHHHHHHHHHHHh
Confidence 344443368888988886 4456778999999985
No 136
>PRK03592 haloalkane dehalogenase; Provisional
Probab=51.27 E-value=76 Score=25.73 Aligned_cols=57 Identities=11% Similarity=-0.041 Sum_probs=35.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCC------CccHHHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDL------ELFPEYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~------~~~pe~~~~l~~FL~~~~ 60 (169)
|+|+|||.--.. ..-..++..+.....++.++--||..- +....+...|.+||+.+.
T Consensus 29 ~vvllHG~~~~~---~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~ 91 (295)
T PRK03592 29 PIVFLHGNPTSS---YLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALG 91 (295)
T ss_pred EEEEECCCCCCH---HHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 789999975333 222344555555467878777777632 123466777888887654
No 137
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=50.69 E-value=67 Score=23.54 Aligned_cols=57 Identities=12% Similarity=0.170 Sum_probs=34.6
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCC--------ccHHHHHHHHHHHHhhhc
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLE--------LFPEYLRHLKKFITSVEK 61 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~--------~~pe~~~~l~~FL~~~~~ 61 (169)
|++|||.....-.+.. +.+.+...+.++.++--||..-. ....+...|..||+.+..
T Consensus 1 vv~~hG~~~~~~~~~~---~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~ 65 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDP---LAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGI 65 (228)
T ss_dssp EEEE-STTTTGGGGHH---HHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTT
T ss_pred eEEECCCCCCHHHHHH---HHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccc
Confidence 6899999876644443 44444444677776666665321 123677788888877654
No 138
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=44.62 E-value=13 Score=33.69 Aligned_cols=54 Identities=15% Similarity=0.078 Sum_probs=40.0
Q ss_pred EEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCCccHHHHHHHHHHHHhhh
Q 030906 3 LVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLELFPEYLRHLKKFITSVE 60 (169)
Q Consensus 3 LIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~~~pe~~~~l~~FL~~~~ 60 (169)
-++.|..|.+||...++..- +.. ...+.++ +.|..+...+++++.|..||....
T Consensus 370 ~~~y~dGDGTV~~~S~~~~~--~~~-~~~~~l~-~~H~~il~n~~v~~~I~~fL~~g~ 423 (440)
T PLN02733 370 EYTYVDGDGTVPVESAKADG--LNA-VARVGVP-GDHRGILRDEHVFRILKHWLKVGE 423 (440)
T ss_pred eEEEeCCCCEEecchhhccC--ccc-cccccCC-chHHHHhcCHHHHHHHHHHHhcCC
Confidence 36789999999998876541 212 2344555 899998888999999999996543
No 139
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=44.55 E-value=52 Score=28.42 Aligned_cols=27 Identities=11% Similarity=0.094 Sum_probs=22.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE 27 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~ 27 (169)
|+||++|..|.+|--+....+.+...+
T Consensus 214 kvli~ygg~DhLIEeeI~~E~a~~f~~ 240 (297)
T PF06342_consen 214 KVLIAYGGKDHLIEEEISFEFAMKFKG 240 (297)
T ss_pred cEEEEEcCcchhhHHHHHHHHHHHhCC
Confidence 689999999999998888887765543
No 140
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=41.28 E-value=14 Score=32.77 Aligned_cols=44 Identities=14% Similarity=0.075 Sum_probs=35.3
Q ss_pred CEEEEEeCCCCccCHH-HHHHHHHHhcCCc-cEEEeCCCCCCCCCc
Q 030906 1 MWLVVQGTADEVVDCS-HGRQLWELCQEKY-EPLWLKGGNHCDLEL 44 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~-~s~~L~e~l~~~~-el~~i~gagH~~~~~ 44 (169)
|++++-|..|.+.|+. .....+..+++.. .+..++|+.|..+.+
T Consensus 253 P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~ 298 (365)
T COG4188 253 PVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLE 298 (365)
T ss_pred ceeeecccccccCCcccccccccccCCcchhheeecCCCccccccc
Confidence 8999999999998875 5666777888853 477899999987544
No 141
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=40.74 E-value=1.4e+02 Score=24.12 Aligned_cols=36 Identities=14% Similarity=0.027 Sum_probs=30.8
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGG 37 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~ga 37 (169)
|+|.++|..+.....+....|-+.+.+ .=+++++.+
T Consensus 55 P~ly~~g~~~~~~s~~e~~~Lr~Yl~~-GGfl~~D~~ 90 (207)
T PF13709_consen 55 PFLYWPGHGDFPLSDEEIANLRRYLEN-GGFLLFDDR 90 (207)
T ss_pred CEEEEeCCCCCCCCHHHHHHHHHHHHc-CCEEEEECC
Confidence 899999999998888899999999887 457778766
No 142
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=39.89 E-value=1.4e+02 Score=26.20 Aligned_cols=62 Identities=18% Similarity=0.065 Sum_probs=45.5
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCC-ccEEEeCCCCCCCCCccH-HHHHHHHHHHHhhhcCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEK-YEPLWLKGGNHCDLELFP-EYLRHLKKFITSVEKSPS 64 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~-~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~~~s~~ 64 (169)
|||+|.|+.-.- .+....+...+... ..++.+.++|=...++.| .+.+.+.-||+...-.++
T Consensus 248 ~vllvvGd~Sp~--~~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy~~s 311 (326)
T KOG2931|consen 248 PVLLVVGDNSPH--VSAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGYLPS 311 (326)
T ss_pred cEEEEecCCCch--hhhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCCcccc
Confidence 799999987543 34555666555432 358888899998888777 888999999997765543
No 143
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=39.60 E-value=25 Score=27.32 Aligned_cols=43 Identities=14% Similarity=0.219 Sum_probs=29.7
Q ss_pred CEEEEEeCCCCccCHH---HHHHHHHHhcCCccEEEeCCCCCCCCCc
Q 030906 1 MWLVVQGTADEVVDCS---HGRQLWELCQEKYEPLWLKGGNHCDLEL 44 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~---~s~~L~e~l~~~~el~~i~gagH~~~~~ 44 (169)
|++++.+..|..+... ......+.+.+...++.++ |+|..+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~H~~~l~ 215 (229)
T PF00975_consen 170 PITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GDHFSMLK 215 (229)
T ss_dssp EEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SETTGHHS
T ss_pred cEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CCCcEecc
Confidence 3677888888888877 3344555566655677777 59987665
No 144
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=38.92 E-value=1.7e+02 Score=22.83 Aligned_cols=56 Identities=14% Similarity=0.128 Sum_probs=32.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCC-------CccHHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDL-------ELFPEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~-------~~~pe~~~~l~~FL~~~ 59 (169)
|++++||.... ...-..+.+.+.....++.++-.||..- +....+...|..+++..
T Consensus 30 ~vv~~hG~~~~---~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~ 92 (278)
T TIGR03056 30 LLLLLHGTGAS---THSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE 92 (278)
T ss_pred eEEEEcCCCCC---HHHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc
Confidence 58899997543 2222344555555466777766666531 12235666677777643
No 145
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=37.39 E-value=1.2e+02 Score=25.20 Aligned_cols=57 Identities=9% Similarity=0.032 Sum_probs=34.4
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCC------CccHHHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDL------ELFPEYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~------~~~pe~~~~l~~FL~~~~ 60 (169)
|+|++||-....-.+ ..+...+...+.++.++.-||... .....+...+..++..+.
T Consensus 133 ~vl~~HG~~~~~~~~---~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 195 (371)
T PRK14875 133 PVVLIHGFGGDLNNW---LFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALG 195 (371)
T ss_pred eEEEECCCCCccchH---HHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 589999976544333 233444444467788888888632 122366667777776543
No 146
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=37.12 E-value=95 Score=27.32 Aligned_cols=57 Identities=12% Similarity=0.198 Sum_probs=36.5
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCC----------CccHHHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDL----------ELFPEYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~----------~~~pe~~~~l~~FL~~~~ 60 (169)
|+|+|||--...-.+. .+...+...+.++.++=-||..- +....+.+.|..||+.+.
T Consensus 129 ~ivllHG~~~~~~~w~---~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~ 195 (383)
T PLN03084 129 PVLLIHGFPSQAYSYR---KVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK 195 (383)
T ss_pred eEEEECCCCCCHHHHH---HHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC
Confidence 5899999875543332 33444545467888777777631 123477788888888654
No 147
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=36.65 E-value=91 Score=29.99 Aligned_cols=61 Identities=15% Similarity=-0.030 Sum_probs=40.2
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCC----------ccEEEeCCCCCCCCCccH---HHHHHHHHHHHhhhcC
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEK----------YEPLWLKGGNHCDLELFP---EYLRHLKKFITSVEKS 62 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~----------~el~~i~gagH~~~~~~p---e~~~~l~~FL~~~~~s 62 (169)
+||..+.+|.-|++.++..+.+.++.. .-+-+-.+|||..-.... +-.+.+..||..+..+
T Consensus 635 ~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~~ 708 (712)
T KOG2237|consen 635 MLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKMLNS 708 (712)
T ss_pred eEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHhcC
Confidence 789999998888888777777666532 124556899998633222 2334566677766543
No 148
>PRK00870 haloalkane dehalogenase; Provisional
Probab=36.60 E-value=1.4e+02 Score=24.41 Aligned_cols=56 Identities=5% Similarity=0.001 Sum_probs=31.9
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC-CccEEEeCCCCCCCC--------CccHHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE-KYEPLWLKGGNHCDL--------ELFPEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~-~~el~~i~gagH~~~--------~~~pe~~~~l~~FL~~~ 59 (169)
|+++|||--.. ...-..+...+.. .+.++.++--||..- +....+.+.|.+||+.+
T Consensus 48 ~lvliHG~~~~---~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l 112 (302)
T PRK00870 48 PVLLLHGEPSW---SYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL 112 (302)
T ss_pred EEEEECCCCCc---hhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc
Confidence 58999996422 2222334444542 356777766666531 11246777888888754
No 149
>PRK03204 haloalkane dehalogenase; Provisional
Probab=35.85 E-value=1.7e+02 Score=23.92 Aligned_cols=56 Identities=13% Similarity=0.047 Sum_probs=33.6
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCC-------ccHHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLE-------LFPEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~-------~~pe~~~~l~~FL~~~ 59 (169)
|++++||..+.. ..-..+...+.+.+.++.++--||..-. ....+...|..|++.+
T Consensus 36 ~iv~lHG~~~~~---~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~ 98 (286)
T PRK03204 36 PILLCHGNPTWS---FLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL 98 (286)
T ss_pred EEEEECCCCccH---HHHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh
Confidence 689999985321 1123344555554678888888886421 1235666777777653
No 150
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=35.57 E-value=1.8e+02 Score=24.89 Aligned_cols=56 Identities=14% Similarity=0.158 Sum_probs=33.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCC--CC-----ccHHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCD--LE-----LFPEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~--~~-----~~pe~~~~l~~FL~~~ 59 (169)
|+|++||-.-.. ..=..++..+...+.++.++--||.. .. ....+...|.+||+.+
T Consensus 90 ~lvllHG~~~~~---~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l 152 (360)
T PLN02679 90 PVLLVHGFGASI---PHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV 152 (360)
T ss_pred eEEEECCCCCCH---HHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh
Confidence 689999986432 22233344454446777777667763 11 1236667788888754
No 151
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=34.76 E-value=32 Score=31.34 Aligned_cols=51 Identities=24% Similarity=0.263 Sum_probs=30.2
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCC--ccEEEeCCCCCCC-CCc---c--HHHHHHHHHHHH
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEK--YEPLWLKGGNHCD-LEL---F--PEYLRHLKKFIT 57 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~--~el~~i~gagH~~-~~~---~--pe~~~~l~~FL~ 57 (169)
+|+|+|++|.- .|..+ ...+++ ..+++.||++|.. +.. . .+....|..|..
T Consensus 354 mlFVYG~nDPW----~A~~f-~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 354 MLFVYGENDPW----SAEPF-RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred EEEEeCCCCCc----ccCcc-ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 68999999953 22222 222222 3467789999974 211 1 256667777765
No 152
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=33.91 E-value=1.9e+02 Score=21.85 Aligned_cols=56 Identities=4% Similarity=0.033 Sum_probs=31.7
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCC-------CccHHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDL-------ELFPEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~-------~~~pe~~~~l~~FL~~~ 59 (169)
+++++||-...- ..-..+...+...+.++.++--||..- +....+...|.+|++.+
T Consensus 15 ~iv~lhG~~~~~---~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 15 VVVLSSGLGGSG---SYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL 77 (257)
T ss_pred EEEEEcCCCcch---hHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh
Confidence 478899976432 222223344444467777777777532 11235666777777654
No 153
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=32.36 E-value=2.1e+02 Score=21.27 Aligned_cols=55 Identities=4% Similarity=0.051 Sum_probs=30.0
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCC--CC----ccHHHHHHHHHHHHhh
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCD--LE----LFPEYLRHLKKFITSV 59 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~--~~----~~pe~~~~l~~FL~~~ 59 (169)
++++||...... .-..+.+.+.....++.++-.||.. .. ....+.+.+..+++.+
T Consensus 16 li~~hg~~~~~~---~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~ 76 (251)
T TIGR02427 16 LVFINSLGTDLR---MWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL 76 (251)
T ss_pred EEEEcCcccchh---hHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 578888754432 2233445555545677766666643 11 1235566666666654
No 154
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=32.06 E-value=63 Score=26.40 Aligned_cols=62 Identities=21% Similarity=0.098 Sum_probs=28.8
Q ss_pred CEEEEEeCCC-CccCHH-HHHHHHHHhcCCccEEEeCCCCCCCCC--c--c--HHHHHHHHHHHHhhhcC
Q 030906 1 MWLVVQGTAD-EVVDCS-HGRQLWELCQEKYEPLWLKGGNHCDLE--L--F--PEYLRHLKKFITSVEKS 62 (169)
Q Consensus 1 PvLIIHG~~D-~vVP~~-~s~~L~e~l~~~~el~~i~gagH~~~~--~--~--pe~~~~l~~FL~~~~~s 62 (169)
||++|||... ....+. .+..|...=-...+++-+.=++..... . . -+....|..|++.+...
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~ 72 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAY 72 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHh
Confidence 8999999997 444443 334433211111245555433332211 1 1 14557899999887643
No 155
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=31.20 E-value=89 Score=23.36 Aligned_cols=38 Identities=13% Similarity=0.025 Sum_probs=23.9
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCD 41 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~ 41 (169)
|++++||-... ...-..++..+.....++.++-.||..
T Consensus 6 ~iv~~HG~~~~---~~~~~~~~~~l~~~~~vi~~d~~G~G~ 43 (245)
T TIGR01738 6 HLVLIHGWGMN---AEVFRCLDEELSAHFTLHLVDLPGHGR 43 (245)
T ss_pred eEEEEcCCCCc---hhhHHHHHHhhccCeEEEEecCCcCcc
Confidence 68999997543 333345555665545677777667764
No 156
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=30.71 E-value=90 Score=21.36 Aligned_cols=27 Identities=22% Similarity=0.038 Sum_probs=21.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE 27 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~ 27 (169)
|++++++..-..++.+....|...+..
T Consensus 40 PtFv~f~N~~~~~~~sY~ryL~n~lRe 66 (80)
T PF14714_consen 40 PTFVLFVNDPELLPESYKRYLENQLRE 66 (80)
T ss_dssp TEEEEEES-CCC--HHHHHHHHHHHHH
T ss_pred CEEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 899999999999999999998887765
No 157
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=29.55 E-value=1.2e+02 Score=26.13 Aligned_cols=54 Identities=13% Similarity=-0.108 Sum_probs=37.4
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCCc-cEEEeCCCCCCCCCccH-HHHHHHHHHH
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEKY-EPLWLKGGNHCDLELFP-EYLRHLKKFI 56 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~~-el~~i~gagH~~~~~~p-e~~~~l~~FL 56 (169)
+-+..|+.|.-||..++..+.+.+++.- ++-. ++..|....... .....+.+.|
T Consensus 245 l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 245 LWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred EEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 3567899999999999999999888732 2333 788898655444 3334444443
No 158
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=28.61 E-value=40 Score=29.71 Aligned_cols=36 Identities=17% Similarity=0.317 Sum_probs=20.8
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCC
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCD 41 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~ 41 (169)
|++++|..|+=-+.. +..........++|+||+|+.
T Consensus 379 viFtNG~~DPW~~lg----v~~~~~~~~~~~~I~g~~Hc~ 414 (434)
T PF05577_consen 379 VIFTNGELDPWRALG----VTSDSSDSVPAIVIPGGAHCS 414 (434)
T ss_dssp EEEEEETT-CCGGGS------S-SSSSEEEEEETT--TTG
T ss_pred EEeeCCCCCCccccc----CCCCCCCCcccEEECCCeeec
Confidence 789999999876665 222222323467899999984
No 159
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=27.45 E-value=1.4e+02 Score=25.98 Aligned_cols=38 Identities=24% Similarity=0.375 Sum_probs=24.3
Q ss_pred EEEeCCCCccCHHHHHHHHHHhcC--------------------------CccEEEeCCCCCCC
Q 030906 4 VVQGTADEVVDCSHGRQLWELCQE--------------------------KYEPLWLKGGNHCD 41 (169)
Q Consensus 4 IIHG~~D~vVP~~~s~~L~e~l~~--------------------------~~el~~i~gagH~~ 41 (169)
|-||..|.+|+...+..-|..+.. ..+++.|.|+||..
T Consensus 213 ~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~~~~~~~~~~~~~~~~~V~~y~i~g~GH~w 276 (312)
T COG3509 213 IGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELPDVGDGTDYDTCDGNARVELYTIDGGGHTW 276 (312)
T ss_pred cccccccccccHHHHHHHHHHhcCCCCCCcccccCCCcccceeeccCCCcceEEEEEeCCcccC
Confidence 455666666655555555555432 12688999999974
No 160
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=27.41 E-value=3.1e+02 Score=22.33 Aligned_cols=60 Identities=17% Similarity=0.005 Sum_probs=33.0
Q ss_pred CEEEEEeCCCCcc-CHHHHHHHHHHhcC-CccEEEeCCCCCCCC----CccHHHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVV-DCSHGRQLWELCQE-KYEPLWLKGGNHCDL----ELFPEYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vV-P~~~s~~L~e~l~~-~~el~~i~gagH~~~----~~~pe~~~~l~~FL~~~~ 60 (169)
++++|||..+..+ .......+.+.+.. ...++.++=-||..- .....+...+..++..+.
T Consensus 28 ~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~ 93 (274)
T TIGR03100 28 GVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFR 93 (274)
T ss_pred eEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4788888776554 33333455555543 256777776677631 122244455555555543
No 161
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=26.93 E-value=2.8e+02 Score=24.50 Aligned_cols=58 Identities=10% Similarity=-0.117 Sum_probs=29.5
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHh-cCCccEEEeCCCCCCCC--C----ccHHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELC-QEKYEPLWLKGGNHCDL--E----LFPEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l-~~~~el~~i~gagH~~~--~----~~pe~~~~l~~FL~~~ 59 (169)
|++||||.-|....- .-..+...+ ...+.++.++.-||..- . +...+...+.+||...
T Consensus 195 P~Vli~gG~~~~~~~-~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~ 259 (414)
T PRK05077 195 PTVLVCGGLDSLQTD-YYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNV 259 (414)
T ss_pred cEEEEeCCcccchhh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhC
Confidence 788899887754211 111222333 33356777776666531 1 1123345666777543
No 162
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=26.49 E-value=1.4e+02 Score=23.13 Aligned_cols=14 Identities=36% Similarity=0.596 Sum_probs=11.0
Q ss_pred cEEEeCCCCCCCCC
Q 030906 30 EPLWLKGGNHCDLE 43 (169)
Q Consensus 30 el~~i~gagH~~~~ 43 (169)
+++.++++||++..
T Consensus 143 ~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 143 ELIILGGGGHFNAA 156 (171)
T ss_dssp EEEEETS-TTSSGG
T ss_pred CeEECCCCCCcccc
Confidence 79999999998744
No 163
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=25.83 E-value=1.9e+02 Score=25.50 Aligned_cols=57 Identities=5% Similarity=0.102 Sum_probs=33.1
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhc-CCccEEEeCCCCCCCCC-------ccHHHHHHHHHHHHhhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQ-EKYEPLWLKGGNHCDLE-------LFPEYLRHLKKFITSVE 60 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~-~~~el~~i~gagH~~~~-------~~pe~~~~l~~FL~~~~ 60 (169)
+++++||-.+.. ..-..+.+.+. ..+.++.++--||..-. ....+...+..|++.+.
T Consensus 138 ~Vl~lHG~~~~~---~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~ 202 (395)
T PLN02652 138 ILIIIHGLNEHS---GRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIR 202 (395)
T ss_pred EEEEECCchHHH---HHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 478999986542 22233444443 33577888777886311 22355667777777654
No 164
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=25.18 E-value=3e+02 Score=23.82 Aligned_cols=28 Identities=21% Similarity=0.144 Sum_probs=22.7
Q ss_pred CEEEEEeCCCCccC--HHHHHHHHHHhcCC
Q 030906 1 MWLVVQGTADEVVD--CSHGRQLWELCQEK 28 (169)
Q Consensus 1 PvLIIHG~~D~vVP--~~~s~~L~e~l~~~ 28 (169)
|+.|+||-.|.-.. ..+-.++.+.+++.
T Consensus 25 P~ii~HGigd~c~~~~~~~~~q~l~~~~g~ 54 (296)
T KOG2541|consen 25 PVIVWHGIGDSCSSLSMANLTQLLEELPGS 54 (296)
T ss_pred CEEEEeccCcccccchHHHHHHHHHhCCCC
Confidence 89999999999888 56667777777763
No 165
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=25.15 E-value=65 Score=28.15 Aligned_cols=35 Identities=23% Similarity=0.076 Sum_probs=29.0
Q ss_pred cCCccEEEeCCCCCCCCCccH-HHHHHHHHHHHhhh
Q 030906 26 QEKYEPLWLKGGNHCDLELFP-EYLRHLKKFITSVE 60 (169)
Q Consensus 26 ~~~~el~~i~gagH~~~~~~p-e~~~~l~~FL~~~~ 60 (169)
+++.++.+++.+||+.+++.| .+...+..|+....
T Consensus 293 QGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 293 QGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred ccceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 345679999999999999888 78888999987655
No 166
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.36 E-value=80 Score=26.43 Aligned_cols=25 Identities=16% Similarity=0.183 Sum_probs=19.7
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcC
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQE 27 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~ 27 (169)
++||+|| |.+++...+.+.+.....
T Consensus 107 ~~Ll~HG--D~f~t~~~~y~~~r~~~~ 131 (237)
T COG2908 107 RILLAHG--DTFCTDDRAYQWFRYKVH 131 (237)
T ss_pred EEEEEeC--CcccchHHHHHHHHHHcc
Confidence 5899999 689998888877766554
No 167
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=24.13 E-value=1.7e+02 Score=24.62 Aligned_cols=58 Identities=16% Similarity=0.269 Sum_probs=37.6
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCCC--c------cHHHHHHHHHHHHhhhc
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDLE--L------FPEYLRHLKKFITSVEK 61 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~~--~------~pe~~~~l~~FL~~~~~ 61 (169)
|+|+||-.+...-+.+. ...+......++.++--||..-. . ...|+..+..|++.+..
T Consensus 37 Vvl~HG~~Eh~~ry~~l--a~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~ 102 (298)
T COG2267 37 VVLVHGLGEHSGRYEEL--ADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAE 102 (298)
T ss_pred EEEecCchHHHHHHHHH--HHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhc
Confidence 78999998876555541 12222343678888888887542 1 23677888888887653
No 168
>PRK10749 lysophospholipase L2; Provisional
Probab=24.12 E-value=2.9e+02 Score=23.04 Aligned_cols=56 Identities=18% Similarity=0.269 Sum_probs=32.2
Q ss_pred CEEEEEeCCCCccCHHHHHHHHH-HhcCCccEEEeCCCCCCCCC------------ccHHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWE-LCQEKYEPLWLKGGNHCDLE------------LFPEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e-~l~~~~el~~i~gagH~~~~------------~~pe~~~~l~~FL~~~ 59 (169)
+|||+||-......+ ..+.. .+...+.++.++--||+.-. ....+...+..|++.+
T Consensus 56 ~vll~HG~~~~~~~y---~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 124 (330)
T PRK10749 56 VVVICPGRIESYVKY---AELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQE 124 (330)
T ss_pred EEEEECCccchHHHH---HHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHH
Confidence 489999975432212 12222 23343677888877887421 2236677777777654
No 169
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=24.10 E-value=1.5e+02 Score=25.65 Aligned_cols=49 Identities=16% Similarity=0.053 Sum_probs=28.9
Q ss_pred EEeCCCCccCHHHHHHHHHHhcCCc---cEEEeCCCCCCCCCccHHHHHHHHHHH
Q 030906 5 VQGTADEVVDCSHGRQLWELCQEKY---EPLWLKGGNHCDLELFPEYLRHLKKFI 56 (169)
Q Consensus 5 IHG~~D~vVP~~~s~~L~e~l~~~~---el~~i~gagH~~~~~~pe~~~~l~~FL 56 (169)
.-|..+.++++. +.|++.|..+. .+-.|+| ||...+..+.+.+.|..++
T Consensus 245 ~g~~~~~~~~pN--r~L~~~L~~~g~~~~yre~~G-gHdw~~Wr~~l~~~L~~l~ 296 (299)
T COG2382 245 TGGEEGDFLRPN--RALAAQLEKKGIPYYYREYPG-GHDWAWWRPALAEGLQLLL 296 (299)
T ss_pred cCCccccccchh--HHHHHHHHhcCCcceeeecCC-CCchhHhHHHHHHHHHHhh
Confidence 334455555544 45666666533 3556887 9987666666666665554
No 170
>PLN02965 Probable pheophorbidase
Probab=23.25 E-value=2.6e+02 Score=22.11 Aligned_cols=56 Identities=13% Similarity=0.102 Sum_probs=32.1
Q ss_pred EEEEEeCCCCccCHHHHHHHHHHh-cCCccEEEeCCCCCCCC-------CccHHHHHHHHHHHHhhh
Q 030906 2 WLVVQGTADEVVDCSHGRQLWELC-QEKYEPLWLKGGNHCDL-------ELFPEYLRHLKKFITSVE 60 (169)
Q Consensus 2 vLIIHG~~D~vVP~~~s~~L~e~l-~~~~el~~i~gagH~~~-------~~~pe~~~~l~~FL~~~~ 60 (169)
++++||.--.. ..=..+...+ ...+.++.++--||+.- +....+...|.++|+.+.
T Consensus 6 vvllHG~~~~~---~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~ 69 (255)
T PLN02965 6 FVFVHGASHGA---WCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLP 69 (255)
T ss_pred EEEECCCCCCc---CcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcC
Confidence 78999975221 1122333444 33356777777777621 123467777888887653
No 171
>PRK05855 short chain dehydrogenase; Validated
Probab=20.32 E-value=3.8e+02 Score=23.72 Aligned_cols=56 Identities=11% Similarity=0.077 Sum_probs=33.8
Q ss_pred CEEEEEeCCCCccCHHHHHHHHHHhcCCccEEEeCCCCCCCC--------CccHHHHHHHHHHHHhh
Q 030906 1 MWLVVQGTADEVVDCSHGRQLWELCQEKYEPLWLKGGNHCDL--------ELFPEYLRHLKKFITSV 59 (169)
Q Consensus 1 PvLIIHG~~D~vVP~~~s~~L~e~l~~~~el~~i~gagH~~~--------~~~pe~~~~l~~FL~~~ 59 (169)
|+|++||.....-.+ ..+.+.+...+.++.++-.||..- +....+...+..|++.+
T Consensus 27 ~ivllHG~~~~~~~w---~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l 90 (582)
T PRK05855 27 TVVLVHGYPDNHEVW---DGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAV 90 (582)
T ss_pred eEEEEcCCCchHHHH---HHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHh
Confidence 589999997553222 234444544467777776677531 11246677777777754
Done!