BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030907
(169 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P7W0|OPA3_SCHPO OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPBC1703.11 PE=3 SV=1
Length = 218
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 6 VKLGTLALKTLSKPVAAKLKQQAAIHPRFRQSIVGIAQANHRITTRMQ--RRIYGHATGG 63
+K+G+L ++TLSKP+A +K QA H FR++ + AQ HR R+ R
Sbjct: 6 LKIGSLLVRTLSKPIANTIKAQAKEHKAFRKACIEFAQWMHRAEFRITGINRAKSGGANV 65
Query: 64 EIRPLNEEKAVQAAVDLIGEIFIFTVAGAAVIFEVQRSARSE-ARKEEI 111
+RPLN+ KAV A + E FIFTVAG A++FE R+ R E R++E+
Sbjct: 66 RLRPLNDAKAVDAGATFLSETFIFTVAGGAILFETWRARRKEKNRRDEV 114
>sp|Q1L9A2|OPA3_DANRE Optic atrophy 3 protein homolog OS=Danio rerio GN=opa3 PE=3 SV=1
Length = 157
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 3 LPVVKLGTLALKTLSKPVAAKLKQQAAIHPRFRQSI-VGIAQANHRITTRMQRRIYGHAT 61
P+ KL L ++ LSKPVA ++K A F+ I + AQA H I R + RI G
Sbjct: 6 FPIAKLLYLGVRQLSKPVANRIKAGARRSEFFKNYICLPPAQAYHWIEMRTKMRIMGF-R 64
Query: 62 GGEIRPLNEEKAVQAAVDLIGEIFIFTVAGAAVIFEVQRSARSEARKEEIRKQELEALRQ 121
G I+PLNE+ A + +L+GE IF + G ++ E R A + RKEE Q + +L+
Sbjct: 65 GSTIKPLNEDAAAELGAELLGEAIIFVIGGGCMVLEYSRQAANSRRKEEELAQSITSLQT 124
Query: 122 RDEGLARELELLRQKIEELEQL 143
+ LA E L +I E+ +L
Sbjct: 125 QLGELALTTETLDAQIREVNRL 146
>sp|Q9VCG3|OPA32_DROME Putative OPA3-like protein CG13603 OS=Drosophila melanogaster
GN=CG13601 PE=2 SV=1
Length = 255
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 2 VLPVVKLGTLALKTLSKPVAAKLKQQAAIHPRFRQSIVGIAQANHRITTRMQRRIYGHAT 61
V P KLG LA+K +SKP+A +K A P FR+ I + A ++ +++
Sbjct: 5 VFPAAKLGILAIKQVSKPIANVIKSNAKSSPFFRKYIC-MPPAQFYNWVEVKTKMWALNM 63
Query: 62 GGEIR--PLNEEKAVQAAVDLIGEIFIFTVAGAAVIFEVQRSARSEARKEEIRKQE 115
GG + PLNE A++ +L+GE IF++ +IFE R E +K E+ + E
Sbjct: 64 GGRVNVPPLNEAMAIELGANLLGEFIIFSIGAGLLIFEYSRQTIKENKKNELAQSE 119
>sp|Q54NW1|OPA3_DICDI OPA3-like protein OS=Dictyostelium discoideum GN=DDB_G0284959 PE=3
SV=1
Length = 199
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 81/143 (56%), Gaps = 9/143 (6%)
Query: 1 MVLPVVKLGTLALKTLSKPVAAKLKQQAAIHPRFRQSIVGIAQANHRITTRMQRRIYGHA 60
MVLP++K+G+L +K+L+KP++ ++K +A+ P F +V A+ H++ ++ + +
Sbjct: 1 MVLPLLKVGSLLIKSLAKPLSKQIKIRASKSPIFHDRVVRGARLWHKLDLKLTK--FNGD 58
Query: 61 TGGEIRPLNEEKAVQAAVDLIGEIFIFTVAGAAVIFEVQRSARSEARKEEIRKQELEALR 120
T + LN A+ +++ E F+ +VA +++E RS+ + +KE EAL+
Sbjct: 59 TTRKPVDLNVNAAIDLGTEIVSEAFLLSVAIGLLLYETSRSSEKDKKKE-------EALQ 111
Query: 121 QRDEGLARELELLRQKIEELEQL 143
R + L +LE+ ++ I L +
Sbjct: 112 NRFKNLEEKLEVQQETINNLTNV 134
>sp|Q641S2|OPA3_XENLA Optic atrophy 3 protein homolog OS=Xenopus laevis GN=opa3 PE=2 SV=1
Length = 151
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 3 LPVVKLGTLALKTLSKPVAAKLKQQAAIHPRFRQSI-VGIAQANHRITTRMQRRIYGHAT 61
P+ KL L ++ +SKP+A ++K A FR + + AQ H + R + RI G
Sbjct: 6 FPIAKLLYLGIRQISKPLANRIKAGARRSEFFRTYVCLPPAQVYHWVEMRSKMRIMGF-R 64
Query: 62 GGEIRPLNEEKAVQAAVDLIGEIFIFTVAGAAVIFEVQRSARSEARKE---EIRKQELEA 118
G I+PLNE+ A + +L+GE IF + G ++ E R + + RKE E R +EA
Sbjct: 65 GAVIKPLNEDAAAELGAELLGEAIIFLIGGGCMVAEYSRQSANSHRKEEEMEARLGSMEA 124
Query: 119 LRQRDEGLARELELLRQKIEELEQLA 144
R L ELE R ++ E +QLA
Sbjct: 125 EIARLGLLTEELE-TRARVTERQQLA 149
>sp|Q9H6K4|OPA3_HUMAN Optic atrophy 3 protein OS=Homo sapiens GN=OPA3 PE=1 SV=1
Length = 179
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 3 LPVVKLGTLALKTLSKPVAAKLKQQAAIHPRFRQSIV-GIAQANHRITTRMQRRIYGHAT 61
P+ KL L ++ +SKP+A ++K+ A F+ I AQ H + R + RI G
Sbjct: 6 FPMAKLLYLGIRQVSKPLANRIKEAARRSEFFKTYICLPPAQLYHWVEMRTKMRIMGF-R 64
Query: 62 GGEIRPLNEEKAVQAAVDLIGEIFIFTVAGAAVIFEVQRSARSEARKEEIRKQELEALR 120
G I+PLNEE A + +L+GE IF V G ++ E R + KEE ++ ALR
Sbjct: 65 GTVIKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQAQQRHKEEEQRAAWNALR 123
>sp|Q505D7|OPA3_MOUSE Optic atrophy 3 protein homolog OS=Mus musculus GN=Opa3 PE=1 SV=1
Length = 179
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 3 LPVVKLGTLALKTLSKPVAAKLKQQAAIHPRFRQSIVGI--AQANHRITTRMQRRIYGHA 60
P+ KL L ++ +SKP+A ++K AA F ++ + + AQ H + R + RI G
Sbjct: 6 FPMAKLFYLGIRQVSKPLANRIKD-AARRSEFFKTYICLPPAQLYHWVEMRTKMRIMGF- 63
Query: 61 TGGEIRPLNEEKAVQAAVDLIGEIFIFTVAGAAVIFEVQRSARSEARKEEIRKQELEALR 120
G I+PLNEE A + +L+GE IF V G ++ E R + KEE ++ AL+
Sbjct: 64 RGTTIKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQTQQRNKEEEQRAAWNALQ 123
>sp|Q05B66|OPA3_BOVIN Optic atrophy 3 protein homolog OS=Bos taurus GN=OPA3 PE=2 SV=1
Length = 191
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Query: 3 LPVVKLGTLALKTLSKPVAAKLKQQAAIHPRFRQSIV-GIAQANHRITTRMQRRIYGHAT 61
P+ KL L ++ +SKP+A ++K+ A F+ I AQ H + R + R+ G
Sbjct: 6 FPMAKLLYLGIRQVSKPLANRIKEAARRSEFFKTYICLPPAQLYHWVEMRAKMRLMGF-N 64
Query: 62 GGEIRPLNEEKAVQAAVDLIGEIFIFTVAGAAVIFEVQRSARSEARKEEIRKQELEALRQ 121
I+PLNEE A + +L+GE IF VA ++ E R + RKE + +A+R
Sbjct: 65 AETIKPLNEEAAAELGAELLGEATIFLVACGCLVLEYSRQKTQQRRKEGEQLAAWDAMRD 124
Query: 122 RDEGLARELELLRQKIE 138
+ LA LE L+ +++
Sbjct: 125 EVDHLALVLEALQAQVQ 141
>sp|Q9VCG2|OPA31_DROME Putative OPA3-like protein CG13602 OS=Drosophila melanogaster
GN=CG13602 PE=3 SV=2
Length = 111
Score = 37.4 bits (85), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 3 LPVVKLGTLALKTLSKPVAAKLKQQAAIHPRFRQSIV-GIAQANHRITTRMQRRIYGHAT 61
PV K+ +K +SKP L HP R+ I+ AQ + R + R+
Sbjct: 6 FPVGKIFIHGVKRISKPFGDLLIWMGKHHPFIRRYIIIPPAQLYNTFEVRSKLRMLRLKQ 65
Query: 62 GGEIRPLNEEKAVQAAVDLIGEIFIFTVAGAAVIFEVQRS 101
I PL+ A + D++ E F+F + + +E+ +
Sbjct: 66 PRRIPPLSTPVATRLGADMLSEAFVFGIGAGLIYYELSKC 105
>sp|F8VQB6|MYO10_MOUSE Unconventional myosin-X OS=Mus musculus GN=Myo10 PE=1 SV=1
Length = 2062
Score = 34.3 bits (77), Expect = 0.40, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 7/55 (12%)
Query: 99 QRSA---RSEARKEEIRKQELEALR--QRDEGLARELELLRQ--KIEELEQLAKQ 146
QR A R+ E R+QELEAL+ QR+ L RELE R+ ++EE+ +L K+
Sbjct: 841 QREADLLRAHQEAETRRQQELEALQKSQREADLTRELEKQRENKQVEEILRLEKE 895
>sp|D3ZJP6|MYO10_RAT Unconventional myosin-X OS=Rattus norvegicus GN=Myo10 PE=1 SV=1
Length = 2060
Score = 33.5 bits (75), Expect = 0.58, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Query: 99 QRSA---RSEARKEEIRKQELEALR--QRDEGLARELELLRQ--KIEELEQLAKQ 146
QR A R++ E ++QELEAL+ QR+ L RELE R+ ++EE+ +L K+
Sbjct: 841 QREADLLRAQQEAETRKQQELEALQKNQREADLTRELEKQRENKQVEEILRLEKE 895
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 107 RKEEIRKQELEAL-RQRDEGLARELELLRQKIEELEQ 142
++EE+++QE E L R++ E L +E EL RQ+ E L++
Sbjct: 2749 KEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQK 2785
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 107 RKEEIRKQELEAL-RQRDEGLARELELLRQKIEELEQ 142
++EE+++QE E L R++ E L +E EL RQ+ E L++
Sbjct: 2799 KEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQK 2835
Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 107 RKEEIRKQELEAL-RQRDEGLARELELLRQKIEELEQLAKQR 147
R+E+ R Q+ EAL RQ E L +E EL RQ+ E LE+ +++
Sbjct: 2777 RQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQ 2818
Score = 31.6 bits (70), Expect = 2.3, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 107 RKEEIRKQELEALRQRDEGLARELELLRQKIEELEQLAKQR 147
++EE+++QE E L Q++E L R+ + QK EEL++ ++R
Sbjct: 2771 KEEELKRQEQERL-QKEEALKRQEQERLQKEEELKRQEQER 2810
Score = 31.6 bits (70), Expect = 2.3, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 107 RKEEIRKQELEALRQRDEGLARELELLRQKIEELEQLAKQR 147
++EE+++QE E L Q++E L R+ + QK EEL++ ++R
Sbjct: 2821 KEEELKRQEQERL-QKEEALKRQEQERLQKEEELKRQEQER 2860
Score = 31.2 bits (69), Expect = 3.7, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 99 QRSARSEARKEEIRKQELEALRQRDEGLARELELLRQKIEEL---EQLAKQ 146
Q R E K+E ++E E RQ E L +E L RQ+ E L E+L +Q
Sbjct: 2756 QEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQ 2806
Score = 31.2 bits (69), Expect = 3.7, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 99 QRSARSEARKEEIRKQELEALRQRDEGLARELELLRQKIEEL---EQLAKQ 146
Q R E K+E ++E E RQ E L +E L RQ+ E L E+L +Q
Sbjct: 2806 QEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQ 2856
>sp|Q1MTN9|RLF2_SCHPO Chromatin assembly factor 1 subunit rlf2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rlf2 PE=3 SV=2
Length = 544
Score = 31.6 bits (70), Expect = 2.6, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Query: 91 GAAVIFEVQRSARSEARKEEIRKQELEALRQRDEGLARELE--------LLRQKIEELEQ 142
G+A + ++ + A++E IR++E E L++ E RE E + +K++ELE+
Sbjct: 70 GSAEAGKEKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEK 129
Query: 143 LAKQR 147
L K+R
Sbjct: 130 LEKER 134
>sp|Q0V8S0|HGS_BOVIN Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Bos
taurus GN=HGS PE=2 SV=1
Length = 777
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 101 SARSEARKEEIRKQELEALRQRDEGLARELELLRQKIEEL----EQLAKQR 147
SA E +E++R+ EA RQR LA++LE++RQK +E QLA QR
Sbjct: 483 SALREEHREKLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEVQRQLAIQR 533
>sp|Q99LI8|HGS_MOUSE Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus
musculus GN=Hgs PE=1 SV=2
Length = 775
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 101 SARSEARKEEIRKQELEALRQRDEGLARELELLRQKIEEL----EQLAKQR 147
SA E +E++R+ EA RQR LA++LE++RQK +E QLA QR
Sbjct: 483 SALREEHREKLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEVQRQLAIQR 533
>sp|Q11102|TG278_CAEEL Putative protein tag-278 OS=Caenorhabditis elegans GN=tag-278 PE=4
SV=1
Length = 1130
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 64 EIRPLNEE-KAVQAAVDLIGEIFIFTVAGAAVIFEVQRSARSEARKEEIRKQELEALRQR 122
EI+ L EE K+++ + +GE F + A ++E + +A A+ + +ELEALR
Sbjct: 243 EIQRLEEERKSLRTEKERLGETFEMKLRRAQSLYETELTA---AKM--LYTKELEALRDH 297
Query: 123 DEGLARELELLRQ-----KIEELEQLAKQRGLSGIFSFKH-ATADEAKL 165
+E L EL L RQ +++EL QL +R + S K+ TA E KL
Sbjct: 298 EEALKEEL-LARQDEFHDRLQEL-QLQSKRSREDLVSCKNDVTALEKKL 344
>sp|Q9JJ50|HGS_RAT Hepatocyte growth factor-regulated tyrosine kinase substrate
OS=Rattus norvegicus GN=Hgs PE=1 SV=1
Length = 776
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 101 SARSEARKEEIRKQELEALRQRDEGLARELELLRQKIEEL----EQLAKQR 147
SA E +E++R+ EA RQR LA++LE++RQK +E QLA QR
Sbjct: 484 SALREEHREKLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEVQRQLAIQR 534
>sp|O14964|HGS_HUMAN Hepatocyte growth factor-regulated tyrosine kinase substrate
OS=Homo sapiens GN=HGS PE=1 SV=1
Length = 777
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 101 SARSEARKEEIRKQELEALRQRDEGLARELELLRQKIEEL----EQLAKQR 147
SA E +E++R+ EA RQR LA++LE++RQK +E QLA QR
Sbjct: 485 SALREEHREKLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEVQRQLAIQR 535
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,096,560
Number of Sequences: 539616
Number of extensions: 1928251
Number of successful extensions: 16110
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 275
Number of HSP's that attempted gapping in prelim test: 15135
Number of HSP's gapped (non-prelim): 1161
length of query: 169
length of database: 191,569,459
effective HSP length: 109
effective length of query: 60
effective length of database: 132,751,315
effective search space: 7965078900
effective search space used: 7965078900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)