BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030910
(169 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FBU|A Chain A, The Crystal Structure Of The Acetyltransferase (gnat
Family) From Bacillus Anthracis
pdb|3FBU|B Chain B, The Crystal Structure Of The Acetyltransferase (gnat
Family) From Bacillus Anthracis
Length = 168
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 1 MLKPIEITLRPFKISDVDDFMGWAGDENVTKYCRWNTFTFRDDAVAFLKEVIKSHPWYRA 60
+K + +R F+ D + + D +V KY FT D K + ++ +
Sbjct: 2 FIKAERLLIRKFEFKDWEAVHEYTSDSDVMKYIPEGVFTEEDTRNFVNKNMGENAKNFPV 61
Query: 61 ICVKDR-PIGSIYVMPGIGKDERRGEIGYAISAKYWGKGVATEAVKIAVACAFKELKYLD 119
I + + +G I G E EIG+ + KY+ KG A+EA + + FKE+K L
Sbjct: 62 ILIGENILVGHIVFHKYFG--EHTYEIGWVFNPKYFNKGYASEAAQATLKYGFKEMK-LH 118
Query: 120 RIEGLVFSENKASQRVMEKAGFIREGLLRK 149
RI EN S RVMEK G REG +K
Sbjct: 119 RIIATCQPENTPSYRVMEKIGMRREGYFKK 148
>pdb|3IGR|A Chain A, The Crystal Structure Of Ribosomal-protein-s5-alanine
Acetyltransferase From Vibrio Fischeri To 2.0a
pdb|3IGR|B Chain B, The Crystal Structure Of Ribosomal-protein-s5-alanine
Acetyltransferase From Vibrio Fischeri To 2.0a
Length = 184
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 84 GEIGYAISAKYWGKGVATEAVKIAVACAFKELKYLDRIEGLVFSENKASQRVMEKAGFIR 143
G +GY++ ++Y GKG+ AV + + FK + L RI N+ S +V+ GF++
Sbjct: 97 GHVGYSLDSEYQGKGIXRRAVNVTIDWXFKA-QNLHRIXAAYIPRNEKSAKVLAALGFVK 155
Query: 144 EGLLRKYFFVKGKSVDIVVFSTVEAD 169
EG +KY ++ G D ++ S + D
Sbjct: 156 EGEAKKYLYINGAWEDHILTSKINDD 181
>pdb|1NSL|A Chain A, Crystal Structure Of Probable Acetyltransferase
pdb|1NSL|B Chain B, Crystal Structure Of Probable Acetyltransferase
pdb|1NSL|C Chain C, Crystal Structure Of Probable Acetyltransferase
pdb|1NSL|D Chain D, Crystal Structure Of Probable Acetyltransferase
pdb|1NSL|E Chain E, Crystal Structure Of Probable Acetyltransferase
pdb|1NSL|F Chain F, Crystal Structure Of Probable Acetyltransferase
Length = 184
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 74 MPGIGKDERRGEIGYAISAKYWGKGVATEAVKIAVACAFKELKYLDRIEGLVFSENKASQ 133
+ + + R+ EIGY I+ ++ GKG+ T A + + AF+EL+ L+R+ N+ S+
Sbjct: 85 LHNLDQVNRKAEIGYWIAKEFEGKGIITAACRKLITYAFEELE-LNRVAICAAVGNEKSR 143
Query: 134 RVMEKAGFIREGLLRKYFFVKGKSVDIVVFSTV 166
V E+ GF+ EG R +V G D+V +S +
Sbjct: 144 AVPERIGFLEEGKARDGLYVNGXHHDLVYYSLL 176
>pdb|3TTH|A Chain A, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|B Chain B, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|C Chain C, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|D Chain D, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|E Chain E, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|F Chain F, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|G Chain G, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|H Chain H, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|I Chain I, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|J Chain J, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|K Chain K, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|L Chain L, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
Length = 170
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 63 VKDRPIGSIYVMPGIGKDERRGEIGYAISAKYWGKGVATEAVKIAVACAFKELKYLDRIE 122
+KD +G + + I RR E IS GKG ATEA + V AF L L +I
Sbjct: 65 LKDNKVGLV-ELTEIDFIHRRCEFAIIISPGEEGKGYATEATDLTVEYAFSILN-LHKIY 122
Query: 123 GLVFSENKASQRVMEKAGFIREGLLRKYFFVKGK 156
LV +N A+ + K+GF EG L ++ KG+
Sbjct: 123 LLVDEDNPAALHIYRKSGFAEEGKLVDEYYSKGR 156
>pdb|3TCV|A Chain A, Crystal Structure Of A Gcn5-Related N-Acetyltransferase
From Brucella Melitensis
pdb|3TCV|B Chain B, Crystal Structure Of A Gcn5-Related N-Acetyltransferase
From Brucella Melitensis
Length = 246
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 90 ISAKYWG-----KGVATEAVKIAVACAFKELKYLDRIEGLVFSENKASQRVMEKAGFIRE 144
I + YWG + ATEA + + F L Y R E +EN S+R E+ GF E
Sbjct: 129 IGSIYWGPLISRRPAATEAQFLFMQYVFDVLGYR-RYEWECHNENGPSRRAAERFGFRFE 187
Query: 145 GLLRKYFFVKGKSVDIVVFSTVEAD 169
G+ R++ VKG++ D FS ++++
Sbjct: 188 GIFRQHMVVKGRNRDTAWFSVLDSE 212
>pdb|3EG7|A Chain A, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|B Chain B, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|C Chain C, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|D Chain D, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|E Chain E, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|F Chain F, Spermidine N1-Acetyltransferase From Vibrio Cholerae
Length = 176
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 6 EITLRPFKISDVDDFMGWAGDENVTKYCRWNTFTFRDDAVAF--LKEVIKSH---PWYRA 60
++TLR + D+ + N+ Y W F + +F L+E+ H R
Sbjct: 7 QLTLRALERGDLRFIHNLNNNRNIXSY--W----FEEPYESFDELEELYNKHIHDNAERR 60
Query: 61 ICVKD---RPIGSIYVMPGIGKDERRGEIGYAISAKYWGKGVATEAVKIAVACAFKELKY 117
V+D IG + ++ I R E I+ ++ GKG A + A+ +F L
Sbjct: 61 FVVEDAQKNLIGLVELIE-INYIHRSAEFQIIIAPEHQGKGFARTLINRALDYSFTILN- 118
Query: 118 LDRIEGLVFSENKASQRVMEKAGFIREGLLRKYFFVKGKSVDI 160
L +I V EN + + E+ GF+ EG L + FF+ G+ D+
Sbjct: 119 LHKIYLHVAVENPKAVHLYEECGFVEEGHLVEEFFINGRYQDV 161
>pdb|2Z10|A Chain A, Crystal Structure Of Putative Acetyltransferase
pdb|2Z11|A Chain A, Crystal Structure Of Putative Acetyltransferase
Length = 194
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 85 EIGYAISAKYWGKGVATEAVKIAVACAFKELKYLDRIEGLVFSENKASQRVMEKAGFIRE 144
E+G + +WG EA + + AF+ L+ +R++ V N+ SQR +E G +RE
Sbjct: 91 ELGTMLFKPFWGSPANKEAKXLLLRHAFEVLRA-ERVQFKVDLRNERSQRALEALGAVRE 149
Query: 145 GLLRK-YFFVKGKSVDIVVFSTVEAD 169
G+LRK G D VV+S ++ +
Sbjct: 150 GVLRKNRRLPDGAFRDDVVYSVLKEE 175
>pdb|2ZXV|A Chain A, Crystal Structure Of Putative Acetyltransferase From T.
Thermophilus Hb8
pdb|2ZXV|B Chain B, Crystal Structure Of Putative Acetyltransferase From T.
Thermophilus Hb8
pdb|2ZXV|C Chain C, Crystal Structure Of Putative Acetyltransferase From T.
Thermophilus Hb8
pdb|2ZXV|D Chain D, Crystal Structure Of Putative Acetyltransferase From T.
Thermophilus Hb8
Length = 194
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 85 EIGYAISAKYWGKGVATEAVKIAVACAFKELKYLDRIEGLVFSENKASQRVMEKAGFIRE 144
E+G + +WG EA + + AF+ L+ +R++ V N+ SQR +E G +RE
Sbjct: 91 ELGTMLFKPFWGSPANKEAKYLLLRHAFEVLRA-ERVQFKVDLRNERSQRALEALGAVRE 149
Query: 145 GLLRK-YFFVKGKSVDIVVFSTVEAD 169
G+LRK G D VV+S ++ +
Sbjct: 150 GVLRKNRRLPDGAFRDDVVYSVLKEE 175
>pdb|2Z0Z|A Chain A, Crystal Structure Of Putative Acetyltransferase
Length = 194
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 85 EIGYAISAKYWGKGVATEAVKIAVACAFKELKYLDRIEGLVFSENKASQRVMEKAGFIRE 144
E+G + +WG EA + + AF+ L+ +R++ V N+ SQR +E G +RE
Sbjct: 91 ELGTMLFKPFWGSPANKEAKYLLLRHAFEVLRA-ERVQFKVDLRNERSQRALEALGAVRE 149
Query: 145 GLLRK-YFFVKGKSVDIVVFSTVEAD 169
G+LRK G D VV+S ++ +
Sbjct: 150 GVLRKNRRLPDGAFRDDVVYSVLKEE 175
>pdb|3R95|A Chain A, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Acetyl-Coa
pdb|3R95|B Chain B, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Acetyl-Coa
pdb|3R96|A Chain A, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Acetyl-Coa And
Amp
pdb|3R96|B Chain B, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Acetyl-Coa And
Amp
pdb|3R9E|A Chain A, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Coenzyme A And
Aspartyl Sulfamoyl Adenosine (Dsa)
pdb|3R9E|B Chain B, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Coenzyme A And
Aspartyl Sulfamoyl Adenosine (Dsa)
pdb|3R9F|A Chain A, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Coenzyme A And
Glutamyl Sulfamoyl Adenosine (Esa)
pdb|3R9F|B Chain B, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Coenzyme A And
Glutamyl Sulfamoyl Adenosine (Esa)
pdb|3R9G|A Chain A, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Coenzyme A And
Processed Microcin C7 Antibiotic
pdb|3R9G|B Chain B, Crystal Structure Of Microcin C7 Self Immunity
Acetyltransferase Mcce In Complex With Coenzyme A And
Processed Microcin C7 Antibiotic
Length = 188
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 5/143 (3%)
Query: 28 NVTKYCRWNTFTFR-DDAVAFLKEVIKSHPWYRAICV---KDRPIGSIYVMPGIGKDERR 83
N K W F D+V+F+++ + + +A+ + I + I +
Sbjct: 45 NFIKSMAWPAFVNNISDSVSFIEQSMIDNQNEKALILFIKYKTKIAGVVSFNIIDHANKT 104
Query: 84 GEIGYAISAKYWGKGVATEAVKIAVACAFKELKYLDRIEGLVFSENKASQRVMEKAGFIR 143
IGY + A + GKG+ T A+ + + + + R +NK S + GF
Sbjct: 105 AYIGYWLGANFQGKGIVTNAINKLIQ-EYGDSGVIKRFVIKCIVDNKKSNATALRCGFTL 163
Query: 144 EGLLRKYFFVKGKSVDIVVFSTV 166
EG+L+K + G S D ++S V
Sbjct: 164 EGVLQKAEILNGVSYDQNIYSKV 186
>pdb|2ZW5|A Chain A, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Coenzyme A In The Trigonal Crystal
pdb|2ZW5|B Chain B, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Coenzyme A In The Trigonal Crystal
pdb|2ZW6|A Chain A, Crystal Structure Of Bleomycin N-Acetyltransferase From
Bleomycin-Producing Streptomyces Verticillus Atcc15003
pdb|2ZW6|B Chain B, Crystal Structure Of Bleomycin N-Acetyltransferase From
Bleomycin-Producing Streptomyces Verticillus Atcc15003
Length = 301
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 67 PIGSIYVMPGIGKDERRGEIGYAISAKYWGKGVATEAVKIAVACAFKELKYLDRIEGLVF 126
P G++ M G+ + + + WG G ATEA V A ++ LDR+E +
Sbjct: 76 PDGTVPGMAGLLGGTDVPGLTWLLRRDSWGHGYATEAAAAVVGHALED-GGLDRVEAWIE 134
Query: 127 SENKASQRVMEKAGFIREGLLRKYFFVKGKSVDIVVFSTVEAD 169
+ N+ S V + G L +++ + ++VV A+
Sbjct: 135 AGNRRSLAVAARVGLTERARLAQHYPHRPGPHEMVVLGKARAE 177
>pdb|2ZW4|A Chain A, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Coenzyme A In The Orthorhombic Crystal
pdb|2ZW4|B Chain B, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Coenzyme A In The Orthorhombic Crystal
pdb|2ZW4|C Chain C, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Coenzyme A In The Orthorhombic Crystal
pdb|2ZW4|D Chain D, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Coenzyme A In The Orthorhombic Crystal
pdb|2ZW7|A Chain A, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Bleomycin A2 And Coenzyme A
pdb|2ZW7|B Chain B, Crystal Structure Of Bleomycin N-Acetyltransferase
Complexed With Bleomycin A2 And Coenzyme A
Length = 301
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 95 WGKGVATEAVKIAVACAFKELKYLDRIEGLVFSENKASQRVMEKAGFIREGLLRKYFFVK 154
WG G ATEA V A ++ LDR+E + + N+ S V + G L +++ +
Sbjct: 104 WGHGYATEAAAAVVGHALED-GGLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHR 162
Query: 155 GKSVDIVVFSTVEAD 169
+ VV A+
Sbjct: 163 PGPHEXVVLGKARAE 177
>pdb|2VI7|A Chain A, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
pdb|2VI7|B Chain B, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
pdb|2VI7|C Chain C, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
Length = 177
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 84 GEIGYAISAKYWGKGVATEAVKIAVACAFKELKYLDRIEGLVFSENKASQRVMEKAGFIR 143
G IG ++ + GKGV + + + A + L R+E V+++N + + K GF
Sbjct: 87 GSIGMGVAVAWQGKGVGSRLLGELLDIADNWMN-LRRVELTVYTDNAPALALYRKFGFET 145
Query: 144 EGLLRKYFFVKGKSVDI 160
EG +R Y G+ VD+
Sbjct: 146 EGEMRDYAVRDGRFVDV 162
>pdb|2I79|A Chain A, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|B Chain B, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|C Chain C, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|D Chain D, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|E Chain E, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|F Chain F, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
Length = 172
Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 69 GSIYVMPGIGKDERR-----GEIGYAISAKYWGKGVAT----EAVKIAVACAFKELKYLD 119
G I + I D+R+ G++ I +YW G+ + EA++ A A L
Sbjct: 68 GKIAGIVNITADQRKRVRHIGDLFIVIGKRYWNNGLGSLLLEEAIEWAQASGI-----LR 122
Query: 120 RIEGLVFSENKASQRVMEKAGFIREGLL-RKYFFVKGKSVDI 160
R++ V + N+A+ + +K GF+ EG R + +GK +D+
Sbjct: 123 RLQLTVQTRNQAAVHLYQKHGFVIEGSQERGAYIEEGKFIDV 164
>pdb|3LD2|A Chain A, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|B Chain B, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|C Chain C, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|D Chain D, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
Length = 197
Score = 33.1 bits (74), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 53 KSHPWYRAICVKDRPIG-----SIYVMPGIGKDERRGEIGYAISAKYWGKGVATEAVKIA 107
+S+ + +KD+ +G S+Y P + G A++ K KG+ V+I
Sbjct: 78 ESNTHFLVAKIKDKIVGVLDYSSLYPFPS---GQHIVTFGIAVAEKERRKGIGRALVQIF 134
Query: 108 VACAFKELKY-LDRIEGLVFSENKASQRVMEKAGFIREGLLRKYFFVKGKSVDIVVFS 164
+ E+K ++ V S N+ + +K GF E L K FF+KG+ VD +++S
Sbjct: 135 L----NEVKSDYQKVLIHVLSSNQEAVLFYKKLGFDLEARLTKQFFLKGQYVDDLIYS 188
>pdb|3OWC|A Chain A, Crystal Structure Of Gnat Superfamily Protein Pa2578 From
Pseudomonas Aeruginosa
pdb|3OWC|B Chain B, Crystal Structure Of Gnat Superfamily Protein Pa2578 From
Pseudomonas Aeruginosa
Length = 188
Score = 33.1 bits (74), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 21/176 (11%)
Query: 6 EITLRPFKISDVDDFMGWAGDENVTKYCRWNTFTFR-----DDAVAFLKEVIKSHP---- 56
E+ L PF++ W E + +W R + L E + P
Sbjct: 13 ELQLVPFQLGHFPILQRWFATEK--ELVQWAGPALRHPLSLEQXHEDLAESRRRPPLRLL 70
Query: 57 WYRAICVKDRPIGSIYVMPGIGKDERRGEIGYA---ISAKYWGKGVATEAVKIAVACAFK 113
W + C D+ IG ++ D R G + A ++ G+G+ ++ +A AF
Sbjct: 71 W--SACRDDQVIGHCQLL----FDRRNGVVRLARIVLAPSARGQGLGLPXLEALLAEAFA 124
Query: 114 ELKYLDRIEGLVFSENKASQRVMEKAGFIREGLLRKYFFVKGKSVDIVVFSTVEAD 169
+ ++R+E V+ N A++ + +AGF EGL R V + ++V+ + +
Sbjct: 125 DAD-IERVELNVYDWNAAARHLYRRAGFREEGLRRSATRVGRERWNVVLXGLLRQE 179
>pdb|2GE3|A Chain A, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
pdb|2GE3|B Chain B, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
pdb|2GE3|C Chain C, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
pdb|2GE3|D Chain D, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
Length = 170
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 84 GEIGYAISAKYWGKGVATEAVKIAVACAFKELKYLDRIEGLVFSENKASQRVMEKAGFIR 143
G +G I Y KG+ + + A + L RIE V ++N + + EK GF
Sbjct: 87 GTLGXGILPAYRNKGLGARLXRRTLDAAHE--FGLHRIELSVHADNARAIALYEKIGFAH 144
Query: 144 EGLLRKYFFVKGKSVD 159
EG R + G +D
Sbjct: 145 EGRARDAVSIDGHYID 160
>pdb|1VHS|A Chain A, Crystal Structure Of A Putative Phosphinothricin N-
Acetyltransferase
pdb|1VHS|B Chain B, Crystal Structure Of A Putative Phosphinothricin N-
Acetyltransferase
Length = 175
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 10/72 (13%)
Query: 96 GKGVAT----EAVKIAVACAFKELKYLDRIEGLVFSENKASQRVMEKAGFIREGLLRKYF 151
GKGV + EA++IA + L +F NK S ++ EK GF GL
Sbjct: 95 GKGVGSYLLQEALRIAPNLGIRSLX------AFIFGHNKPSLKLFEKHGFAEWGLFPGIA 148
Query: 152 FVKGKSVDIVVF 163
GK D+ +
Sbjct: 149 EXDGKRYDLKIL 160
>pdb|2AE6|A Chain A, Crystal Structure Of Acetyltransferase Of Gnat Family From
Enterococcus Faecalis V583
pdb|2AE6|B Chain B, Crystal Structure Of Acetyltransferase Of Gnat Family From
Enterococcus Faecalis V583
pdb|2AE6|C Chain C, Crystal Structure Of Acetyltransferase Of Gnat Family From
Enterococcus Faecalis V583
pdb|2AE6|D Chain D, Crystal Structure Of Acetyltransferase Of Gnat Family From
Enterococcus Faecalis V583
Length = 166
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 114 ELKYLDRIEGLVFSENKASQRVMEKAGFIREGLLRKYFFVKGKSVD 159
E+ + ++ V + N+ + R EK GF++E ++ F++ G D
Sbjct: 111 EISGIHKLSLRVXATNQEAIRFYEKHGFVQEAHFKEEFYINGHYCD 156
>pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
pdb|1BG3|B Chain B, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
Length = 918
Score = 28.1 bits (61), Expect = 2.6, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 18/83 (21%)
Query: 43 DAVAFLKEVIKSHPWYRA--ICVKDRPIGSIYVMPGIGKDERRGEIGYAISAKYWGKGVA 100
D V L + IK Y A + V + +G+ M G D+++ E+G I G
Sbjct: 184 DVVKLLNKAIKKRGDYDANIVAVVNDTVGT---MMTCGYDDQQCEVGLII-------GTG 233
Query: 101 TEAVKIAVACAFKELKYLDRIEG 123
T A C +EL+++D +EG
Sbjct: 234 TNA------CYMEELRHIDLVEG 250
>pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose
And Phosphate
pdb|1QHA|A Chain A, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
pdb|1QHA|B Chain B, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
Length = 917
Score = 27.7 bits (60), Expect = 3.4, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 18/83 (21%)
Query: 43 DAVAFLKEVIKSHPWYRA--ICVKDRPIGSIYVMPGIGKDERRGEIGYAISAKYWGKGVA 100
D V L + IK Y A + V + +G+ M G D++ E+G I G
Sbjct: 184 DVVKLLNKAIKKRGDYDANIVAVVNDTVGT---MMTCGYDDQHCEVGLII-------GTG 233
Query: 101 TEAVKIAVACAFKELKYLDRIEG 123
T A C +EL+++D +EG
Sbjct: 234 TNA------CYMEELRHIDLVEG 250
>pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
pdb|1HKB|B Chain B, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
Length = 917
Score = 27.7 bits (60), Expect = 3.5, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 18/83 (21%)
Query: 43 DAVAFLKEVIKSHPWYRA--ICVKDRPIGSIYVMPGIGKDERRGEIGYAISAKYWGKGVA 100
D V L + IK Y A + V + +G+ M G D++ E+G I G
Sbjct: 184 DVVKLLNKAIKKRGDYDANIVAVVNDTVGT---MMTCGYDDQHCEVGLII-------GTG 233
Query: 101 TEAVKIAVACAFKELKYLDRIEG 123
T A C +EL+++D +EG
Sbjct: 234 TNA------CYMEELRHIDLVEG 250
>pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I
Complexed With Glucose, Glucose-6-Phosphate, And Adp
Length = 917
Score = 27.7 bits (60), Expect = 3.5, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 18/83 (21%)
Query: 43 DAVAFLKEVIKSHPWYRA--ICVKDRPIGSIYVMPGIGKDERRGEIGYAISAKYWGKGVA 100
D V L + IK Y A + V + +G+ M G D++ E+G I G
Sbjct: 184 DVVKLLNKAIKKRGDYDANIVAVVNDTVGT---MMTCGYDDQHCEVGLII-------GTG 233
Query: 101 TEAVKIAVACAFKELKYLDRIEG 123
T A C +EL+++D +EG
Sbjct: 234 TNA------CYMEELRHIDLVEG 250
>pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With
Glucose And Adp In The Active Site
Length = 917
Score = 27.7 bits (60), Expect = 3.6, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 18/83 (21%)
Query: 43 DAVAFLKEVIKSHPWYRA--ICVKDRPIGSIYVMPGIGKDERRGEIGYAISAKYWGKGVA 100
D V L + IK Y A + V + +G+ M G D++ E+G I G
Sbjct: 184 DVVKLLNKAIKKRGDYDANIVAVVNDTVGT---MMTCGYDDQHCEVGLII-------GTG 233
Query: 101 TEAVKIAVACAFKELKYLDRIEG 123
T A C +EL+++D +EG
Sbjct: 234 TNA------CYMEELRHIDLVEG 250
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 65 DRPIGSIYVMPGIGKDERR 83
+ PIG+ YV P IG+D R
Sbjct: 301 NNPIGAYYVFPNIGEDGRE 319
>pdb|3Q26|A Chain A, Cyrstal Structure Of Human Alpha-Synuclein (10-42) Fused
To Maltose Binding Protein (Mbp)
Length = 404
Score = 26.6 bits (57), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 31/110 (28%)
Query: 64 KDRPIGSIYVMP---GIGKDER---------RGEIGYAIS--AKYW------------GK 97
KD+P+G++ + + KD R +GEI I + +W G+
Sbjct: 296 KDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGR 355
Query: 98 GVATEAVKIAVACAFKELKYLDRIEGLVFSENKASQRVMEKAGFIREGLL 147
EA+K A + + K EG+V + K Q V E AG +EG+L
Sbjct: 356 QTVDEALKDAQTNSSSKAK-----EGVVAAAEKTKQGVAEAAGKTKEGVL 400
>pdb|1H0D|B Chain B, Crystal Structure Of Human Angiogenin In Complex With Fab
Fragment Of Its Monoclonal Antibody Mab 26-2f
Length = 223
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 82 RRGEIGYAISAKYWGKGVA 100
R G+ GYA + YWG+G +
Sbjct: 98 RLGDYGYAYTMDYWGQGTS 116
>pdb|2IDV|A Chain A, Crystal Structure Of Wheat C113s Mutant Eif4e Bound To 7-
Methyl-Gdp
Length = 177
Score = 26.2 bits (56), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 95 WGKGVATEAVKIAVACAFKE-LKYLDRIEGLVFSENKASQR 134
W K A EA +I++ +KE L Y D I +V + K S +
Sbjct: 129 WTKNAANEAAQISIGKQWKEFLDYKDSIGFIVHEDAKRSDK 169
>pdb|2IDR|A Chain A, Crystal Structure Of Translation Initiation Factor Eif4e
From Wheat
pdb|2IDR|B Chain B, Crystal Structure Of Translation Initiation Factor Eif4e
From Wheat
Length = 177
Score = 26.2 bits (56), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 95 WGKGVATEAVKIAVACAFKE-LKYLDRIEGLVFSENKASQR 134
W K A EA +I++ +KE L Y D I +V + K S +
Sbjct: 129 WTKNAANEAAQISIGKQWKEFLDYKDSIGFIVHEDAKRSDK 169
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,990,712
Number of Sequences: 62578
Number of extensions: 200854
Number of successful extensions: 500
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 473
Number of HSP's gapped (non-prelim): 29
length of query: 169
length of database: 14,973,337
effective HSP length: 92
effective length of query: 77
effective length of database: 9,216,161
effective search space: 709644397
effective search space used: 709644397
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 48 (23.1 bits)