BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030912
(169 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7SWD3|GID8_NEMVE Glucose-induced degradation protein 8 homolog OS=Nematostella
vectensis GN=v1g247787 PE=3 SV=1
Length = 225
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
Query: 3 QPANCLEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCS 62
QP L+ ++ R +I +G+ +A+ +T +L D+L+ N+ L+F L +EL+
Sbjct: 53 QPTAPLDSLDDRIKIREAVQKGDLEQAVSMTNKLNPDILDSNQQLYFHLQQQRLIELIRE 112
Query: 63 RKCTEALEFAQTKLTPFGK-VQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADN 121
+ A+EFAQ + + G+ +Y+E+LE MALLA++ PE+SP LL RQ VA
Sbjct: 113 KDIEAAVEFAQGQFSEQGQESGRYLEELEQTMALLAFDNPEESPFGDLLHTSQRQKVASE 172
Query: 122 LNRAILE 128
LN AILE
Sbjct: 173 LNAAILE 179
>sp|Q5ZKQ7|GID8_CHICK Glucose-induced degradation protein 8 homolog OS=Gallus gallus
GN=GID8 PE=2 SV=1
Length = 228
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
Query: 3 QPANCLEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCS 62
+P+ LE ++ R +I L+G +AI L L +LL+ N+ L+F L H +EL+
Sbjct: 56 EPSVDLETLDERIKIREMILKGQIQEAISLINSLHPELLDTNRYLYFHLQQQHLIELIRQ 115
Query: 63 RKCTEALEFAQTKLTPFGKVQKY-VEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADN 121
R+ ALEFAQT+L G+ + + ++E +ALLA++ PE+SP LL++ RQ V
Sbjct: 116 RETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSE 175
Query: 122 LNRAILE 128
+N+A+L+
Sbjct: 176 VNQAVLD 182
>sp|Q32L52|GID8_BOVIN Glucose-induced degradation protein 8 homolog OS=Bos taurus GN=GID8
PE=2 SV=1
Length = 228
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Query: 3 QPANCLEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCS 62
+P+ LE ++ R +I L+G +AI L L +LL+ N+ L+F L H +EL+
Sbjct: 56 EPSVDLETLDERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQ 115
Query: 63 RKCTEALEFAQTKLTPFGKVQKY-VEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADN 121
R+ ALEFAQT+L G+ + + ++E +ALLA++ PE SP LL++ RQ V
Sbjct: 116 RETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDNPEDSPFGDLLNMMQRQKVWSE 175
Query: 122 LNRAILE 128
+N+A+L+
Sbjct: 176 VNQAVLD 182
>sp|Q9D7M1|GID8_MOUSE Glucose-induced degradation protein 8 homolog OS=Mus musculus
GN=Gid8 PE=2 SV=1
Length = 228
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Query: 3 QPANCLEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCS 62
+P+ LE ++ R +I L+G +AI L L +LL+ N+ L+F L H +EL+
Sbjct: 56 EPSVDLETLDERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQ 115
Query: 63 RKCTEALEFAQTKLTPFGKVQKY-VEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADN 121
R+ ALEFAQT+L G+ + + ++E +ALLA++ PE+SP LL + RQ V
Sbjct: 116 RETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDSPEESPFGDLLHMMQRQKVWSE 175
Query: 122 LNRAILE 128
+N+A+L+
Sbjct: 176 VNQAVLD 182
>sp|Q9NWU2|GID8_HUMAN Glucose-induced degradation protein 8 homolog OS=Homo sapiens
GN=GID8 PE=1 SV=1
Length = 228
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
Query: 3 QPANCLEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCS 62
+P+ LE ++ R +I L+G +AI L L +LL+ N+ L+F L H +EL+
Sbjct: 56 EPSVDLETLDERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQ 115
Query: 63 RKCTEALEFAQTKLTPFGKVQKY-VEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADN 121
R+ ALEFAQT+L G+ + + ++E +ALLA++ PE+SP LL RQ V
Sbjct: 116 RETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDSPEESPFGDLLHTMQRQKVWSE 175
Query: 122 LNRAILE 128
+N+A+L+
Sbjct: 176 VNQAVLD 182
>sp|Q6PC55|GID8_DANRE Glucose-induced degradation protein 8 homolog OS=Danio rerio
GN=gid8 PE=2 SV=1
Length = 228
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Query: 3 QPANCLEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCS 62
+P L+ ++ R +I L+G +AI L L +LL+ N+ L+F L H +EL+
Sbjct: 56 EPNVDLDSLDERIKIREMVLKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRL 115
Query: 63 RKCTEALEFAQTKLTPFGKVQKY-VEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADN 121
R+ ALEFAQ++L G+ + + ++E +ALLA++ PE+SP LL++ RQ V
Sbjct: 116 RETEAALEFAQSQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSE 175
Query: 122 LNRAILE 128
+N+A+L+
Sbjct: 176 VNQAVLD 182
>sp|Q54X16|GID8_DICDI Glucose-induced degradation protein 8 homolog OS=Dictyostelium
discoideum GN=DDB_G0279265 PE=3 SV=2
Length = 228
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 24 GNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFG-KV 82
G+ K IE+ +L ++L+ N L+F L +EL+ EAL+FAQ +L P G +
Sbjct: 81 GDVEKGIEIVNDLNPEILDTNPQLYFHLQQQKLIELIRKGMTAEALKFAQDELAPQGEEN 140
Query: 83 QKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL 127
K++E+LE ++LL +E+ KSP+ LL RQ A LN AIL
Sbjct: 141 NKFLEELEKTISLLVFEDTAKSPLSSLLDHSQRQKTAGELNSAIL 185
>sp|Q4Z8K6|RBP9X_DROME Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster
GN=RanBPM PE=1 SV=1
Length = 962
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 61 CSRKCTEALEFAQTKLTPFGK--------VQKYVEKLEDFMALLAYEEPEKSPMFHLLSL 112
C R + LEF + +L+ G+ ++ + LED +L+AY P SP+ LL
Sbjct: 844 CGRVIEKILEFGK-ELSSMGQQLEKENLMTEEERQMLEDAFSLIAYSNPWSSPLGWLLCP 902
Query: 113 EYRQHVADNLNRAILER---PRYAAMERLIQQTTAVRQCLSQE-LGKD 156
R+ V+ LN AILE R +E L+ + + + + Q LG+D
Sbjct: 903 SRRESVSTTLNSAILESLNFERRPPLEYLVAHASELIKVIGQHSLGED 950
Score = 34.7 bits (78), Expect = 0.30, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 8 LEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELV 60
L ++ R++I+ L G +AIE T LLE NK+L F L F+E++
Sbjct: 653 LASIKTRQKIIKLILTGKMSQAIEHTLRSFPGLLENNKNLWFALKCRQFIEMI 705
>sp|Q6VN19|RBP10_MOUSE Ran-binding protein 10 OS=Mus musculus GN=Ranbp10 PE=1 SV=2
Length = 620
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 33/71 (46%)
Query: 79 FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILERPRYAAMERL 138
+GK + E L+D +LLAY +P P+ H L R+ V LN AILE L
Sbjct: 529 YGKNLAHTEMLQDAFSLLAYSDPWSCPVGHQLDPIQREPVCAALNSAILESQNLPKQPPL 588
Query: 139 IQQTTAVRQCL 149
+ +CL
Sbjct: 589 MLALGQASECL 599
Score = 36.6 bits (83), Expect = 0.086, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 14 RKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELV 60
R++I LEG +AIE T+ LLE N +L F L FVE+V
Sbjct: 295 RQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMV 341
>sp|Q28FM1|RANB9_XENTR Ran-binding protein 9 OS=Xenopus tropicalis GN=ranbp9 PE=2 SV=1
Length = 548
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 8 LEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELV 60
L ++ R+RI L G +AIE T++L LLE+N +L F L F+E+V
Sbjct: 253 LASIKNRQRIQKLVLSGRMGEAIETTQQLYPSLLERNPNLLFTLKVRQFIEMV 305
Score = 39.7 bits (91), Expect = 0.010, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 89 LEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILE---RPRYAAMERLIQQTTAV 145
L+D +LLAY +P SP+ + L R+HV +LN AIL+ P+ + ++Q +
Sbjct: 467 LKDAFSLLAYSDPWNSPVGYQLDPIQREHVCSSLNSAILDIHNLPKQPPLSLALEQASQC 526
Query: 146 RQCLSQ 151
+ ++Q
Sbjct: 527 LEMMAQ 532
>sp|Q9PTY5|RANB9_XENLA Ran-binding protein 9 OS=Xenopus laevis GN=ranbp9 PE=2 SV=1
Length = 548
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 8 LEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELV 60
L ++ R+RI L G +AIE T++L LLE+N +L F L F+E+V
Sbjct: 253 LASIKNRQRIQKLVLSGRMGEAIETTQQLYPSLLERNPNLLFTLKVRQFIEMV 305
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 89 LEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILE---RPRYAAMERLIQQTTAV 145
L+D +LLAY +P SP+ + L R+HV +LN AIL+ P+ + ++Q +
Sbjct: 467 LKDAFSLLAYSDPWNSPVGYQLDPIQREHVCSSLNSAILDIHNLPKQPPLSLALEQASQC 526
Query: 146 RQCLSQ 151
+ ++Q
Sbjct: 527 LEMMAQ 532
>sp|Q96S59|RANB9_HUMAN Ran-binding protein 9 OS=Homo sapiens GN=RANBP9 PE=1 SV=1
Length = 729
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 8 LEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELV 60
L ++ R+RI L G +AIE T++L LLE+N +L F L F+E+V
Sbjct: 401 LASIKNRQRIQKLVLAGRMGEAIETTQQLYPSLLERNPNLLFTLKVRQFIEMV 453
Score = 35.4 bits (80), Expect = 0.17, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 80 GKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILER---PRYAAME 136
GK + L+D +LLAY +P SP+ + L R+ V LN AILE P+ +
Sbjct: 639 GKNTANKKMLKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHNLPKQPPLA 698
Query: 137 RLIQQTTAVRQCL 149
+ Q T QCL
Sbjct: 699 LAMGQAT---QCL 708
>sp|P69566|RANB9_MOUSE Ran-binding protein 9 OS=Mus musculus GN=Ranbp9 PE=1 SV=1
Length = 653
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 8 LEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELV 60
L ++ R+RI L G +AIE T++L LLE+N +L F L F+E+V
Sbjct: 326 LASIKNRQRIQKLVLAGRMGEAIETTQQLYPSLLERNPNLLFTLKVRQFIEMV 378
Score = 35.4 bits (80), Expect = 0.18, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 80 GKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILER---PRYAAME 136
GK + L+D +LLAY +P SP+ + L R+ V LN AILE P+ +
Sbjct: 563 GKNTANKKMLKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHNLPKQPPLA 622
Query: 137 RLIQQTTAVRQCL 149
+ Q T QCL
Sbjct: 623 LAMGQAT---QCL 632
>sp|A1L252|RANB9_DANRE Ran-binding protein 9 OS=Danio rerio GN=ranbp9 PE=2 SV=1
Length = 597
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 8 LEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELV 60
L ++ R++I L G +AIE T++L LLE+N DL F L F+E+V
Sbjct: 283 LASIKNRQKIQKLVLSGRMGEAIETTQQLYPSLLERNPDLLFMLKVRQFIEMV 335
Score = 38.1 bits (87), Expect = 0.029, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 32/71 (45%)
Query: 80 GKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILERPRYAAMERLI 139
GK + L+D +LLAY +P SP+ + L R+ V LN AILE L
Sbjct: 507 GKNSANKKMLKDAFSLLAYSDPWNSPVGYQLDSIQREPVCSTLNSAILETHNLPKQPPLA 566
Query: 140 QQTTAVRQCLS 150
QCLS
Sbjct: 567 LAMGQAAQCLS 577
>sp|Q96G75|RMD5B_HUMAN Protein RMD5 homolog B OS=Homo sapiens GN=RMND5B PE=2 SV=1
Length = 393
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 15 KRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSR--KCTEALEFA 72
RIL E + A+E Q LLE N L F L LHF+ L+ K EAL +A
Sbjct: 160 NRILEALHEQDLGPALEWAVSHRQRLLELNSSLEFKLHRLHFIRLLAGGPAKQLEALSYA 219
Query: 73 QTKLTPFGKVQKYVEKLEDFMALLAYEE--PEKSPMFHLLSLEYRQHVADNLNR 124
+ PF ++ + +++ M L Y EKSP HLL + + + R
Sbjct: 220 R-HFQPFARLHQ--REIQVMMGSLVYLRLGLEKSPYCHLLDSSHWAEICETFTR 270
>sp|Q91YQ7|RMD5B_MOUSE Protein RMD5 homolog B OS=Mus musculus GN=Rmnd5b PE=2 SV=1
Length = 393
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 15 KRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCS--RKCTEALEFA 72
RIL E + A+E Q LLE N L F L LHF+ L+ K EAL +A
Sbjct: 160 NRILEALHEQDLGPALEWAVSHRQRLLELNSSLEFKLHRLHFIRLLAGGPEKQLEALSYA 219
Query: 73 QTKLTPFGKVQKYVEKLEDFMALLAYEE--PEKSPMFHLLSLEYRQHVADNLNR 124
+ PF ++ + +++ M L Y EKSP HLL + + + R
Sbjct: 220 R-HFQPFARLHQ--REIQVMMGSLVYLRLGLEKSPYCHLLDNSHWAEICETFTR 270
>sp|A3KMV8|RBP10_BOVIN Ran-binding protein 10 OS=Bos taurus GN=RANBP10 PE=2 SV=1
Length = 620
Score = 37.7 bits (86), Expect = 0.038, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 32/71 (45%)
Query: 79 FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILERPRYAAMERL 138
+GK + E L+D +LLAY +P P+ L R+ V LN AILE L
Sbjct: 529 YGKDLAHTEMLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPL 588
Query: 139 IQQTTAVRQCL 149
+ +CL
Sbjct: 589 MLALGQASECL 599
Score = 36.6 bits (83), Expect = 0.080, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 14 RKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELV 60
R++I LEG +AIE T+ LLE N +L F L FVE+V
Sbjct: 295 RQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMV 341
>sp|Q6VN20|RBP10_HUMAN Ran-binding protein 10 OS=Homo sapiens GN=RANBP10 PE=1 SV=1
Length = 620
Score = 37.4 bits (85), Expect = 0.044, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 32/71 (45%)
Query: 79 FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILERPRYAAMERL 138
+GK + E L+D +LLAY +P P+ L R+ V LN AILE L
Sbjct: 529 YGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPL 588
Query: 139 IQQTTAVRQCL 149
+ +CL
Sbjct: 589 MLALGQASECL 599
Score = 36.2 bits (82), Expect = 0.096, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 14 RKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELV 60
R++I LEG +AIE T+ LLE N +L F L FVE+V
Sbjct: 295 RQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMV 341
>sp|Q1LUS8|RBP10_DANRE Ran-binding protein 10 OS=Danio rerio GN=ranbp10 PE=3 SV=1
Length = 604
Score = 36.2 bits (82), Expect = 0.11, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 79 FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILER---PRYAAM 135
+GK + + L+D +LLAY +P P+ L R+ + LN AILE P+ +
Sbjct: 513 YGKNATHKKMLQDAFSLLAYSDPWNCPVGQQLDPMQREAICSALNSAILESQNLPKQPPL 572
Query: 136 ERLIQQTTAVRQCLSQ 151
+ Q T Q +++
Sbjct: 573 MLALGQATECVQLMAR 588
Score = 36.2 bits (82), Expect = 0.11, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 14 RKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELV 60
R+RI L G +AI+ T++L LLE N +L F L FVE+V
Sbjct: 283 RQRIQKLVLAGRVGEAIDATQQLYPGLLEHNPNLLFMLKCRQFVEMV 329
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic
OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1
Length = 388
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 25 NALKAIELTEELAQDLLEKNKDLHFDL------LSLHFVELVCSRKCTEALEFAQTKLTP 78
NA A L EE + L + D++ DL L+ + + KC++ EF Q +L+P
Sbjct: 30 NAQAASALREERKKPLYQNGDDVYADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSP 89
Query: 79 FGKVQ 83
+G +Q
Sbjct: 90 YGNIQ 94
>sp|A3LPW2|FYV10_PICST Protein FYV10 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=FYV10 PE=3 SV=2
Length = 511
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 40 LLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKY-----------VEK 88
L + N +L F++ F+ L+ EA++F+ L+P+G V Y + +
Sbjct: 232 LKKANSNLEFEINYCRFLSLIEKGDVNEAIKFSSINLSPYGNVSNYQDTDRANHEHNLNR 291
Query: 89 LEDFMALLAY 98
L++ LL Y
Sbjct: 292 LKEIGGLLVY 301
>sp|Q1DTI6|FYV10_COCIM Protein FYV10 OS=Coccidioides immitis (strain RS) GN=FYV10 PE=3
SV=1
Length = 402
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 15 KRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQT 74
+RI H G +A++ E L + L F+L ++E++ EA + A+
Sbjct: 169 QRIAHSLRRGETKEALQWCGENKVALKKIQNRLEFELRLQQYIEVLRVGDKAEARQHAKK 228
Query: 75 KLTPFGKVQKYVEKLEDFMALLAYEEPEKS-PMFHLLSLEYRQHVAD 120
LTP + Q + ++ LLAY ++ P + SLE +H++D
Sbjct: 229 FLTPHSETQSH--DIQRAAGLLAYPPDTRAEPYMSMYSLERWKHLSD 273
>sp|Q54PS7|PLBLD_DICDI Phospholipase B-like protein D OS=Dictyostelium discoideum GN=plbD
PE=3 SV=1
Length = 569
Score = 32.3 bits (72), Expect = 1.5, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 79 FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLL 110
F YVE LEDF +LL Y + E P+ H L
Sbjct: 450 FRNFAGYVESLEDFQSLLRYNDFEYDPLSHKL 481
>sp|O94712|YC5C_SCHPO Uncharacterized protein C1259.12c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1259.12c PE=4 SV=2
Length = 491
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 93 MALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILERPRYAA---MERLIQQTTAVRQCL 149
M LLAY +P SP+ +S ++ +++A+ +N +LE ++ + R +Q T + L
Sbjct: 411 MGLLAYFDPFSSPLSFFMSSDFHKYMAEQINCLLLELTGHSPDSELRRFLQHTVCLNDLL 470
>sp|Q6GLP4|RMD5A_XENLA Protein RMD5 homolog A OS=Xenopus laevis GN=rmnd5a PE=2 SV=1
Length = 391
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 40 LLEKNKDLHFDLLSLHFVELVCSRKCT--EALEFAQTKLTPFGKVQKYVEKLEDFMALLA 97
L+ +N L F L L+F+ L+ EAL++A+ PF + + + ++ M L
Sbjct: 183 LMAQNSSLEFKLHRLYFISLLMGGTVNQQEALQYAKN-FQPF--AENHQKDIQVLMGSLV 239
Query: 98 Y--EEPEKSPMFHLLSLEYRQHVADNLNR 124
Y + E SP HLL + D R
Sbjct: 240 YLRQGIENSPYVHLLDANQWADICDIFTR 268
>sp|Q640V2|RMD5A_XENTR Protein RMD5 homolog A OS=Xenopus tropicalis GN=rmnd5a PE=2 SV=1
Length = 391
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 40 LLEKNKDLHFDLLSLHFVELVCSRKCT--EALEFAQTKLTPFGKVQKYVEKLEDFMALLA 97
L+ +N L F L L+F+ L+ EAL++A+ PF + + + ++ M L
Sbjct: 183 LMAQNSSLEFKLHRLYFISLLMGGTVNQREALQYAKN-FQPF--AENHQKDIQVLMGSLV 239
Query: 98 Y--EEPEKSPMFHLLSLEYRQHVADNLNR 124
Y + E SP HLL + D R
Sbjct: 240 YLRQGIENSPYVHLLDANQWADICDIFTR 268
>sp|A6NM11|L37A2_HUMAN Leucine-rich repeat-containing protein 37A2 OS=Homo sapiens
GN=LRRC37A2 PE=2 SV=2
Length = 1700
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 22 LEGNALKAIELTEELA---QDLLEKNKDLHFDLLSLHFVELVCSR 63
++GN KA TE+L +L E +KD LLSL +++L C++
Sbjct: 880 IDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNK 924
>sp|O60309|L37A3_HUMAN Leucine-rich repeat-containing protein 37A3 OS=Homo sapiens
GN=LRRC37A3 PE=2 SV=2
Length = 1634
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 22 LEGNALKAIELTEELA---QDLLEKNKDLHFDLLSLHFVELVCSR 63
++GN KA TE+L +L E +KD LLSL +++L C++
Sbjct: 880 IDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNK 924
>sp|A6NMS7|L37A1_HUMAN Leucine-rich repeat-containing protein 37A OS=Homo sapiens
GN=LRRC37A PE=2 SV=3
Length = 1700
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 22 LEGNALKAIELTEELA---QDLLEKNKDLHFDLLSLHFVELVCSR 63
++GN KA TE+L +L E +KD LLSL +++L C++
Sbjct: 880 IDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNK 924
>sp|Q6BYF0|FYV10_DEBHA Protein FYV10 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=FYV10 PE=3 SV=2
Length = 511
Score = 31.2 bits (69), Expect = 3.4, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 40 LLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKY-----------VEK 88
L + N +L F++ F+ L+ EA++F+Q L+P+G Y + K
Sbjct: 231 LKKANSNLEFEINYCKFLSLIEEGDVNEAIKFSQVNLSPYGNKGNYQSQEFMNHESNLNK 290
Query: 89 LEDFMALLAY 98
L++ LL Y
Sbjct: 291 LKEIGGLLVY 300
>sp|Q1CHT7|RLMF_YERPN Ribosomal RNA large subunit methyltransferase F OS=Yersinia pestis
bv. Antiqua (strain Nepal516) GN=rlmF PE=3 SV=1
Length = 336
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 34/80 (42%)
Query: 53 SLHFVELVCSRKCTEALEFAQTKLTPFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSL 112
LH CSR +AL + +L PF Y + DF LA + K+ + H +
Sbjct: 28 GLHPRNRHCSRYDFDALSVSCPELIPFLAPTAYGDISVDFADPLAVKMLNKALLKHFYGI 87
Query: 113 EYRQHVADNLNRAILERPRY 132
EY AD+L I R Y
Sbjct: 88 EYWDIPADSLCPPIPGRADY 107
>sp|Q7CJ72|RLMF_YERPE Ribosomal RNA large subunit methyltransferase F OS=Yersinia pestis
GN=rlmF PE=3 SV=1
Length = 336
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 34/80 (42%)
Query: 53 SLHFVELVCSRKCTEALEFAQTKLTPFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSL 112
LH CSR +AL + +L PF Y + DF LA + K+ + H +
Sbjct: 28 GLHPRNRHCSRYDFDALSVSCPELIPFLAPTAYGDISVDFADPLAVKMLNKALLKHFYGI 87
Query: 113 EYRQHVADNLNRAILERPRY 132
EY AD+L I R Y
Sbjct: 88 EYWDIPADSLCPPIPGRADY 107
>sp|Q1C6E5|RLMF_YERPA Ribosomal RNA large subunit methyltransferase F OS=Yersinia pestis
bv. Antiqua (strain Antiqua) GN=rlmF PE=3 SV=1
Length = 336
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 34/80 (42%)
Query: 53 SLHFVELVCSRKCTEALEFAQTKLTPFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSL 112
LH CSR +AL + +L PF Y + DF LA + K+ + H +
Sbjct: 28 GLHPRNRHCSRYDFDALSVSCPELIPFLAPTAYGDISVDFADPLAVKMLNKALLKHFYGI 87
Query: 113 EYRQHVADNLNRAILERPRY 132
EY AD+L I R Y
Sbjct: 88 EYWDIPADSLCPPIPGRADY 107
>sp|P53076|VID30_YEAST Vacuolar import and degradation protein 30 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VID30 PE=1
SV=1
Length = 958
Score = 30.4 bits (67), Expect = 5.0, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 21/160 (13%)
Query: 11 MEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELV--CSRKCTEA 68
+++R+ + + +G K I + DLL+ N +L F+L +++ ++ S K +
Sbjct: 770 VKIRQELRYLINKGQISKCINYIDNEIPDLLKNNLELVFELKLANYLVMIKKSSSKDDDE 829
Query: 69 L------------EFAQTKLTPFGKVQKYVEKLEDFMALLAYEEP---EKSPMFHLLSLE 113
+ EF P ++ +L + ALLAY P + LS E
Sbjct: 830 IENLILKGQELSNEFIYDTKIPQSLRDRFSGQLSNVSALLAYSNPLVEAPKEISGYLSDE 889
Query: 114 YRQ----HVADNLNRAILERPRYAAMERLIQQTTAVRQCL 149
Y Q V++N L + A+E +I T A+ L
Sbjct: 890 YLQERLFQVSNNTILTFLHKDSECALENVISNTRAMLSTL 929
>sp|Q80YQ8|RMD5A_MOUSE Protein RMD5 homolog A OS=Mus musculus GN=Rmnd5a PE=2 SV=2
Length = 391
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 40 LLEKNKDLHFDLLSLHFVELVCSRKCT--EALEFAQTKLTPFGKVQKYVEKLEDFMALLA 97
L+ +N L F L L+F+ L+ EAL++A+ PF + + ++ M L
Sbjct: 183 LIAQNSSLEFKLHRLYFISLLMGGTTNQREALQYAKN-FQPFAL--NHQKDIQVLMGSLV 239
Query: 98 Y--EEPEKSPMFHLLSLEYRQHVADNLNR 124
Y + E SP HLL + D R
Sbjct: 240 YLRQGIENSPYVHLLDANQWADICDIFTR 268
>sp|Q9H871|RMD5A_HUMAN Protein RMD5 homolog A OS=Homo sapiens GN=RMND5A PE=1 SV=1
Length = 391
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 40 LLEKNKDLHFDLLSLHFVELVCSRKCT--EALEFAQTKLTPFGKVQKYVEKLEDFMALLA 97
L+ +N L F L L+F+ L+ EAL++A+ PF + + ++ M L
Sbjct: 183 LIAQNSSLEFKLHRLYFISLLMGGTTNQREALQYAKN-FQPFAL--NHQKDIQVLMGSLV 239
Query: 98 Y--EEPEKSPMFHLLSLEYRQHVADNLNR 124
Y + E SP HLL + D R
Sbjct: 240 YLRQGIENSPYVHLLDANQWADICDIFTR 268
>sp|P39142|PDP_BACSU Pyrimidine-nucleoside phosphorylase OS=Bacillus subtilis (strain
168) GN=pdp PE=3 SV=2
Length = 433
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 2 KQPANCLEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVC 61
+Q + DM + L FA+ GNAL+ E + L E +DLH +L+L +V
Sbjct: 230 RQTMAVISDMS---QPLGFAI-GNALEVKEAIDTLKG---EGPEDLHELVLTLGSQMVVL 282
Query: 62 SRKCTEALEFAQTKLTPFGKVQKYVEKLEDFM 93
++K + L+ A+ KL K K +EK +DF+
Sbjct: 283 AKKA-DTLDEARAKLEEVMKNGKALEKFKDFL 313
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,472,581
Number of Sequences: 539616
Number of extensions: 2171278
Number of successful extensions: 6424
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 6378
Number of HSP's gapped (non-prelim): 69
length of query: 169
length of database: 191,569,459
effective HSP length: 109
effective length of query: 60
effective length of database: 132,751,315
effective search space: 7965078900
effective search space used: 7965078900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)