BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030919
(169 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 22/180 (12%)
Query: 1 MGNASSMLTQYDIEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFAR 60
MGN +S Y +E C+H F EI L +RF +LD +N G +S EEF+S+PE +
Sbjct: 1 MGNEAS----YPLE----MCSH-FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQ 51
Query: 61 ---LLRMVD--------GLNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTD 109
+ R++D ++FKEF+ +S FS QK+ F F++YD D +G ++ +
Sbjct: 52 NPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGE 111
Query: 110 MLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLMILSDFVKILGNSGLKMEVEVPVD 169
+ VL+ + G + + Q +Q++ + A D + +F ++G GL + ++ VD
Sbjct: 112 LFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVG--GLDIHKKMVVD 169
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 29/182 (15%)
Query: 1 MGN-ASSMLTQYDIEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFA 59
MG+ AS++L ++EE+++ FS +I LY RF LD+ G +S E+F +PE A
Sbjct: 1 MGSRASTLLRDEELEEIKKET--GFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELA 58
Query: 60 ------RLLRMV-----DGLNFKEFVAFLSAFSPHA---------------TLHQKIEFI 93
R++ D +NF+ F+ L+ F P + K+ F
Sbjct: 59 INPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFA 118
Query: 94 FKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLMILSDFVK 153
F++YD D + K++ ++L VLR + G IS++Q + + EA DS + ++FVK
Sbjct: 119 FRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVK 178
Query: 154 IL 155
+L
Sbjct: 179 VL 180
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 29/182 (15%)
Query: 1 MGN-ASSMLTQYDIEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFA 59
MG+ AS++L ++EE+++ FS +I LY RF LD+ G +S E+F +PE A
Sbjct: 1 MGSRASTLLRDEELEEIKKET--GFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELA 58
Query: 60 ------RLLRMV-----DGLNFKEFVAFLSAFSPHA---------------TLHQKIEFI 93
R++ D +NF+ F+ L+ F P + K+ F
Sbjct: 59 INPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFA 118
Query: 94 FKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLMILSDFVK 153
F++YD D + K++ ++L VLR + G IS++Q + + EA DS + ++FVK
Sbjct: 119 FRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVK 178
Query: 154 IL 155
+L
Sbjct: 179 VL 180
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 88/163 (53%), Gaps = 14/163 (8%)
Query: 18 QHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFAR---LLRMVD-------- 66
+ C+H F EI L +RF +LD +N G +S EEF+S+PE + + R++D
Sbjct: 9 EMCSH-FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNG 67
Query: 67 GLNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQ 126
++FKEF+ +S FS QK+ F F++YD D +G ++ ++ VL+ + G + + Q
Sbjct: 68 EVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQ 127
Query: 127 REQVLTDVLDEAGYTKDSLMILSDFVKILGNSGLKMEVEVPVD 169
+Q++ + A D + +F ++G GL + ++ VD
Sbjct: 128 LQQIVDKTIINADKDGDGRISFEEFCAVVG--GLDIHKKMVVD 168
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 13/153 (8%)
Query: 28 EIVSLYERFCQLDRNNGGFISAEEFLSVPEFAR---LLRMVD--------GLNFKEFVAF 76
EI L +RF +LD +N G +S EEF+S+PE + + R++D ++FKEF+
Sbjct: 4 EIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEG 63
Query: 77 LSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLD 136
+S FS QK+ F F++YD D +G ++ ++ VL+ + G + + Q +Q++ +
Sbjct: 64 VSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTII 123
Query: 137 EAGYTKDSLMILSDFVKILGNSGLKMEVEVPVD 169
A D + +F ++G GL + ++ VD
Sbjct: 124 NADKDGDGRISFEEFCAVVG--GLDIHKKMVVD 154
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 13/153 (8%)
Query: 28 EIVSLYERFCQLDRNNGGFISAEEFLSVPEFAR---LLRMVD--------GLNFKEFVAF 76
EI L +RF +LD +N G +S EEF+S+PE + + R++D ++FKEF+
Sbjct: 5 EIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEG 64
Query: 77 LSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLD 136
+S FS QK+ F F++YD D +G ++ ++ VL+ + G + + Q +Q++ +
Sbjct: 65 VSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTII 124
Query: 137 EAGYTKDSLMILSDFVKILGNSGLKMEVEVPVD 169
A D + +F ++G GL + ++ VD
Sbjct: 125 NADKDGDGRISFEEFCAVVG--GLDIHKKMVVD 155
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 26/182 (14%)
Query: 1 MGNASSMLTQYDIEEVQQHCNHAFSQQEIVSLYERFCQL----DRNNGGFISA----EEF 52
MG + S L++ + E Q ++QEI+ + RFC+L R+ + A E+
Sbjct: 24 MGGSGSRLSKELLAEYQDLT--FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQI 81
Query: 53 LSVPEFA------RLLRMV------DGLNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSD 100
LS+PE R+ R+ D L+F++F+ LS FS AT K + F+++D D
Sbjct: 82 LSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFD 141
Query: 101 GNGKVTFTDMLDVLRDLTG----TFISEKQREQVLTDVLDEAGYTKDSLMILSDFVKILG 156
+G + D+ ++ LTG T +S + +Q++ ++L+E+ +D + LS+F ++
Sbjct: 142 DDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 201
Query: 157 NS 158
S
Sbjct: 202 RS 203
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 23 AFSQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFA------RLLR--MVDG---LNFK 71
FSQ ++ L+ RF LDRN G++S + + A R++ DG ++F
Sbjct: 22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGDRIIESFFPDGSQRVDFP 81
Query: 72 EFVAFLSAFSPHA----------------TLHQKIEFIFKVYDSDGNGKVTFTDMLDVLR 115
FV L+ F P + K+ + F++YD D +GK++ +ML VLR
Sbjct: 82 GFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLR 141
Query: 116 DLTGTFISEKQREQVLTDVLDEAGYTKDSLMILSDFVKILGNSGLKMEVE 165
+ G ++E+Q E + + EA D + +F K L KM+VE
Sbjct: 142 LMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLE----KMDVE 187
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 24 FSQQEIVSLYERFCQL----DRNNGGFISA----EEFLSVPEFA------RLLRMV---- 65
++QEI+ + RFC+L R+ + A E+ LS+PE R+ R+
Sbjct: 14 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSP 73
Query: 66 --DGLNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTG---- 119
D L+F++F+ LS FS AT K + F+++D D +G + D+ ++ LTG
Sbjct: 74 AKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGED 133
Query: 120 TFISEKQREQVLTDVLDEAGYTKDSLMILSDFVKILGNS 158
T +S + +Q++ ++L+E+ +D + LS+F ++ S
Sbjct: 134 TRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 172
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 22/131 (16%)
Query: 1 MGNASS-MLTQYDIEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSV---- 55
MGN+ S L++ +EE+Q N F+++E+ S Y+ F L G I+ +EF ++
Sbjct: 1 MGNSKSGALSKEILEELQ--LNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKF 56
Query: 56 -PE-----FAR-LLRMVDG-----LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNG 103
PE +A+ + R D L+FKE+V L S T +QK+E+ F +YD DGNG
Sbjct: 57 FPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT-NQKLEWAFSLYDVDGNG 115
Query: 104 KVTFTDMLDVL 114
++ ++L+++
Sbjct: 116 TISKNEVLEIV 126
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 22/130 (16%)
Query: 2 GNASS-MLTQYDIEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSV----- 55
GN+ S L++ +EE+Q N F+++E+ S Y+ F L G I+ +EF ++
Sbjct: 1 GNSKSGALSKEILEELQ--LNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFF 56
Query: 56 PE-----FAR-LLRMVDG-----LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGK 104
PE +A+ + R D L+FKE+V L S T +QK+E+ F +YD DGNG
Sbjct: 57 PEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT-NQKLEWAFSLYDVDGNGT 115
Query: 105 VTFTDMLDVL 114
++ ++L+++
Sbjct: 116 ISKNEVLEIV 125
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 22/130 (16%)
Query: 2 GNASS-MLTQYDIEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSV----- 55
GN+ S L++ +EE+Q N F+++E+ S Y+ F L G I+ +EF ++
Sbjct: 1 GNSKSGALSKEILEELQ--LNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFF 56
Query: 56 PE-----FAR-LLRMVDG-----LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGK 104
PE +A+ + R D L+FKE+V L S T +QK+E+ F +YD DGNG
Sbjct: 57 PEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT-NQKLEWAFSLYDVDGNGT 115
Query: 105 VTFTDMLDVL 114
++ ++L+++
Sbjct: 116 ISKNEVLEIV 125
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 70/128 (54%), Gaps = 21/128 (16%)
Query: 3 NASSMLTQYDIEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-----PE 57
+ S L++ +EE+Q N F+++E+ S Y+ F L G I+ +EF ++ PE
Sbjct: 3 SKSGALSKEILEELQ--LNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPE 58
Query: 58 -----FAR-LLRMVDG-----LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVT 106
+A+ + R D L+FKE+V L S T +QK+E+ F +YD DGNG ++
Sbjct: 59 ADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT-NQKLEWAFSLYDVDGNGTIS 117
Query: 107 FTDMLDVL 114
++L+++
Sbjct: 118 KNEVLEIV 125
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 22/130 (16%)
Query: 2 GNASS-MLTQYDIEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSV----- 55
GN+ S L++ +EE+Q N F+++E+ S Y+ F L G I+ +EF ++
Sbjct: 1 GNSKSGALSKEILEELQ--LNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFF 56
Query: 56 PE-----FAR-LLRMVDG-----LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGK 104
PE +A+ + R D L+FK++V L S T +QK+E+ F +YD DGNG
Sbjct: 57 PEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKT-NQKLEWAFSLYDVDGNGT 115
Query: 105 VTFTDMLDVL 114
++ ++L+++
Sbjct: 116 ISKNEVLEIV 125
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 21/128 (16%)
Query: 3 NASSMLTQYDIEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-----PE 57
+ S L++ +EE+Q N F+++E+ S Y+ F L G I+ +EF ++ PE
Sbjct: 3 SKSGALSKEILEELQ--LNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPE 58
Query: 58 -----FAR-LLRMVDG-----LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVT 106
+A+ + R D L+FK++V L S T +QK+E+ F +YD DGNG ++
Sbjct: 59 ADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKT-NQKLEWAFSLYDVDGNGTIS 117
Query: 107 FTDMLDVL 114
++L+++
Sbjct: 118 KNEVLEIV 125
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV----------PEFARLLRMVD-----GL 68
++++I E F D++N G ISA E +V E A L+ +D +
Sbjct: 5 LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
F EF+A +S Q++ FKV+D +G+G ++ ++ VL + G +++ + +
Sbjct: 65 EFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI-GEKLTDAEVD 123
Query: 129 QVLTDVLDEAG 139
++L +V D +G
Sbjct: 124 EMLREVSDGSG 134
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 21/123 (17%)
Query: 8 LTQYDIEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-----PE----- 57
L++ +EE+Q N FS++E+ S Y+ F L G I+ ++F S+ P+
Sbjct: 16 LSKEILEELQ--LNTKFSEEELCSWYQSF--LKDCPTGRITQQQFQSIYAKFFPDTDPKA 71
Query: 58 -----FARLLRMVDG-LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDML 111
F +DG L+FKE+V L + T +QK+E+ F +YD DGNG ++ ++L
Sbjct: 72 YAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKT-NQKLEWAFSLYDVDGNGTISKNEVL 130
Query: 112 DVL 114
+++
Sbjct: 131 EIV 133
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ + ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 419
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 420 EEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
S+++IV E F D++ G I+ EE +V P L M+ DG +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
F EF++ ++ ++++ FKV+D D NG ++ +++ V+ +L G +++++ E
Sbjct: 64 EFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINL-GEKLTDEEVE 122
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
Q++ EA D + +FVK++
Sbjct: 123 QMIK----EADLDGDGQVNYEEFVKMM 145
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 20/148 (13%)
Query: 23 AFSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG--- 67
A ++++I E F D++ G I+ +E +V P A L M+ DG
Sbjct: 1 AATEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
++F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLT 115
Query: 128 EQVLTDVLDEAGYTKDSLMILSDFVKIL 155
++ + +++ EA D + +FV+++
Sbjct: 116 DEEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-------DG-L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ + ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 418
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 419 EEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ + ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 419
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 420 EEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-------DG-L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ + ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 419
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 420 EEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-------DG-L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ + ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 418
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 419 EEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 28/176 (15%)
Query: 1 MGNASSMLTQYDIEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSV----- 55
MG +S L ++++ + + F++ EI Y+ F L G +S EEF +
Sbjct: 1 MGKQNSKLRPEVMQDLLESTD--FTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFF 56
Query: 56 -----PEFA-RLLRMVDG-----LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGK 104
+FA + R D ++F+EF+ LS S L QK+++ F +YD DGNG
Sbjct: 57 PYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTS-RGKLEQKLKWAFSMYDLDGNGY 115
Query: 105 VTFTDMLDVLRDLTGTFIS-------EKQREQVLTDVLDEAGYTKDSLMILSDFVK 153
++ +ML++++ + S E E+ + + +D + L +F++
Sbjct: 116 ISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 171
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 119 EEVDEMIREANIDGDGQVNYEEFVQMM 145
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 8 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 67
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 68 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 122
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 123 EEVDEMIREADIDGDGQVNYEEFVQMM 149
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 119
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 117
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 118 EEVDEMIREADIDGDGQVNYEEFVQMM 144
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 65
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 66 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 120
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 121 EEVDEMIREADIDGDGQVNYEEFVQMM 147
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 115
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 116 EEVDEMIREADIDGDGQVNYEEFVQMM 142
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-------DG-L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 116
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 117 EEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 119
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 119
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 69
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 70 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 124
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 125 EEVDEMIREADIDGDGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 116
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 117 EEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 20/146 (13%)
Query: 25 SQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---LN 69
++++I E F D++ G I+ +E +V P A L M+ DG ++
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 70 FKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQ 129
F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK ++
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDE 115
Query: 130 VLTDVLDEAGYTKDSLMILSDFVKIL 155
+ +++ EA D + +FV+++
Sbjct: 116 EVDEMIREADIDGDGQVNYEEFVQMM 141
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 419
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 420 EEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 420
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 421 EEVDEMIREADIDGDGQVNYEEFVQMM 447
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 119
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 382
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 383 EEVDEMIREADIDGDGQVNYEEFVQMM 409
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-------DG-L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 418
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 419 EEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 385
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 386 EEVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 419
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 420 EEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 385
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 386 EEVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
+ ++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ +K++ F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 64 DFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 119 EEVDEMIREADVDGDGQVNYEEFVQVM 145
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTD 119
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + ++ EA D + +FV+++
Sbjct: 120 EEVDQMIREADIDGDGQVNYEEFVQMM 146
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRM-----VDG---L 68
++++I E F D++N G IS+ E +V P A + + VDG +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
F EF+A +S Q++ FKV+D +G+G ++ ++ VL + G +++ + +
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI-GEKLTDAEVD 122
Query: 129 QVLTDVLDEAG 139
+L +V D +G
Sbjct: 123 DMLREVSDGSG 133
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-------DG-L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 355
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ +L EK +
Sbjct: 356 DFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-----GEKLTD 410
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 411 EEVDEMIREADIDGDGQVNYEEFVQMM 437
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 21/146 (14%)
Query: 25 SQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---LN 69
++++I E F D++ G I+ +E +V P A L M+ DG ++
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 70 FKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQ 129
F EF+ + A T ++I F+V+D DGNG ++ ++ V+ T + EK ++
Sbjct: 61 FPEFLTMM-ARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDE 114
Query: 130 VLTDVLDEAGYTKDSLMILSDFVKIL 155
+ +++ EA D + +FV+++
Sbjct: 115 EVDEMIREANIDGDGQVNYEEFVQMM 140
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 1 MGNASSMLTQYDIEEVQQHCNHAFSQQEIVSLYERF---C---QLDRNNGGFISAE--EF 52
MG ++S L +EE+ + F+++E+ Y+ F C QLD I + F
Sbjct: 1 MGKSNSKLKPEVVEELTRKT--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPF 58
Query: 53 LSVPEFARLLRMV-----DG-LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVT 106
+FA + V DG + F EF+ LS S TL +K+ + FK+YD D +G +T
Sbjct: 59 GDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTS-RGTLDEKLRWAFKLYDLDNDGYIT 117
Query: 107 FTDMLDVL 114
+MLD++
Sbjct: 118 RNEMLDIV 125
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRM-----VDG---L 68
++++I E F D++N G IS+ E +V P A + + VDG +
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
F EF+A +S Q++ FKV+D +G+G ++ ++ VL + G +++ + +
Sbjct: 65 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI-GEKLTDAEVD 123
Query: 129 QVLTDVLDEAG 139
+L +V D +G
Sbjct: 124 DMLREVSDGSG 134
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTD 119
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV ++
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF++ ++ +++ FKV+D DGNG ++ ++ V+ T + EK +
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM-----TNLGEKLTD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ +++ EA D + +FV+++
Sbjct: 119 DEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF++ ++ +++ FKV+D DGNG ++ ++ V+ T + EK +
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM-----TNLGEKLTD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ +++ EA D + +FV+++
Sbjct: 119 DEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV ++
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTD 119
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV ++
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV ++
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ +L E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE--- 121
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ +++ EA D + +FV+++
Sbjct: 122 --VDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ +L E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE--- 120
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ +++ EA D + +FV+++
Sbjct: 121 --VDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
+ ++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++++ F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 64 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 119 EEVDEMIREADVDGDGQVNYEEFVQVM 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
+ ++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++++ F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTD 115
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV+++
Sbjct: 116 EEVDEMIREADVDGDGQVNYEEFVQVM 142
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
+++++ E F D++ G I+ E +V P A L M+ DG +
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG V+ ++ V+ T + EK +
Sbjct: 64 DFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVM-----TRLGEKLSD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ A D + +FV++L
Sbjct: 119 EEVDEMIRAADTDGDGQVNYEEFVRVL 145
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 20/159 (12%)
Query: 17 QQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV---- 65
Q+ ++++ + E F D + G I A+E P+ + +M+
Sbjct: 15 QKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEID 74
Query: 66 -DG---LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTF 121
DG ++F+EF+ ++A ++I F+++D D +G +T D+ V ++L
Sbjct: 75 KDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKEL---- 130
Query: 122 ISEKQREQVLTDVLDEAGYTKDSLMILSDFVKILGNSGL 160
E E+ L +++ EA D+ + +F++I+ + L
Sbjct: 131 -GENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTD 119
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ E+ D + +FV ++
Sbjct: 120 EEVDEMIRESDIDGDGQVNYEEFVTMM 146
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 16/97 (16%)
Query: 23 AFSQQEIVSLYERFCQLDRN--NGGFISAEEF-LSVPE-------FA-RLLRMVDG---- 67
F+ +E+ +LYE F +L + + G I EEF L++ FA R+ + D
Sbjct: 30 PFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNG 89
Query: 68 -LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNG 103
+ F EFV L F P A +H+K++F FK+YD G
Sbjct: 90 VIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTG 126
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 16/97 (16%)
Query: 23 AFSQQEIVSLYERFCQLDRN--NGGFISAEEF-LSVPE-------FA-RLLRMVDG---- 67
F+ +E+ +LYE F +L + + G I EEF L++ FA R+ + D
Sbjct: 30 PFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNG 89
Query: 68 -LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNG 103
+ F EFV L F P A +H+K++F FK+YD G
Sbjct: 90 VIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTG 126
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 68/147 (46%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ ++ +V P A L M+ DG +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTI 364
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F +F+ ++ ++I F+V+ DGNG ++ + V+ T + EK +
Sbjct: 365 DFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVM-----TNLGEKLTD 419
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EAG D + FV+++
Sbjct: 420 EEVDEMIREAGIDGDGQVNYEQFVQMM 446
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRM-----VDG---L 68
++++I E F D++N G IS+ E +V P A + + VDG +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEK 125
F EF+A +S Q++ FKV+D +G+G ++ ++ VL T I EK
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL-----TSIGEK 115
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 71/153 (46%), Gaps = 20/153 (13%)
Query: 23 AFSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG--- 67
++++ + E F D + G I A+E P+ + +M+ DG
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
++F+EF+ ++A ++I F+++D D GK++F ++ V ++L E
Sbjct: 61 IDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKEL-----GENMT 115
Query: 128 EQVLTDVLDEAGYTKDSLMILSDFVKILGNSGL 160
++ L +++DEA D + +F +I+ + L
Sbjct: 116 DEELQEMIDEADRDGDGEVNEEEFFRIMKKTSL 148
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 34/140 (24%)
Query: 24 FSQQEIVSLYERFCQLDRN--NGGFISAEEF-LSVPE-------FA-RLLRMVDG----- 67
FS EI +LYE F ++ + G I+ EEF L++ + FA R+ + D
Sbjct: 42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGI 101
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
L F+EF LS F P+A + KI F F++YD G FI ++
Sbjct: 102 LGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQG-----------------FIERQEV 144
Query: 128 EQVLTDVLDEAGYT-KDSLM 146
+Q++ L E+G KD+++
Sbjct: 145 KQMVVATLAESGMNLKDTVI 164
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 34/140 (24%)
Query: 24 FSQQEIVSLYERFCQLDRN--NGGFISAEEF-LSVPE-------FA-RLLRMVDG----- 67
FS EI +LYE F ++ + G I+ EEF L++ + FA R+ + D
Sbjct: 11 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGI 70
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
L F+EF LS F P+A + KI F F++YD G FI ++
Sbjct: 71 LGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQG-----------------FIERQEV 113
Query: 128 EQVLTDVLDEAGYT-KDSLM 146
+Q++ L E+G KD+++
Sbjct: 114 KQMVVATLAESGMNLKDTVI 133
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDML---DVLRDLTGTFIS- 123
++FKEF+ LS S L+ K+ + F++YD D NG +++ +ML D + + G+ +
Sbjct: 80 IDFKEFICALSVTS-RGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKL 138
Query: 124 ---EKQREQVLTDVLDEAGYTKDSLMILSDFVK 153
E E+ + + + KD + L +F +
Sbjct: 139 PEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCE 171
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVL 114
LN EF F P E++F V+D+D NG + F + + L
Sbjct: 43 LNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICAL 89
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++ +I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 5 LTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++++ F+V+D D NG ++ ++ V+ T + EK +
Sbjct: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTD 119
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FVK++
Sbjct: 120 EEVDEMIREADVDGDGQINYDEFVKVM 146
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 20/145 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L + DG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
NF EF+ + ++I F+V+D DGNG ++ ++ V T + EK +
Sbjct: 64 NFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVX-----TNLGEKLTD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVK 153
+ + + + EA D + +FV+
Sbjct: 119 EEVDEXIREADIDGDGQVNYEEFVQ 143
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ + ++I F+V+D DGNG ++ ++ V+ T + EK +
Sbjct: 64 DFPEFLTMMARKMKDS--EEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTD 116
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FV ++
Sbjct: 117 EEVDEMIREADIDGDGQVNYEEFVTMM 143
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-------DG-L 68
++++I + F Q D+ G I+ E ++ P A L ++ +G L
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
NF EF ++ +++ FK++D DG+G ++ ++ V+ +L EK +
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINL-----GEKVTD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA + D ++ +FV ++
Sbjct: 119 EEIDEMIREADFDGDGMINYEEFVWMI 145
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 20/147 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
+ +I E F D++ G I+ +E +V P A L M+ DG +
Sbjct: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ ++ ++++ F+V+D D NG ++ ++ V+ T + EK +
Sbjct: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTD 119
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
+ + +++ EA D + +FVK++
Sbjct: 120 EEVDEMIREADVDGDGQINYEEFVKVM 146
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 44/128 (34%)
Query: 9 TQYDIEEVQQH-------CNHA-FSQQEIVSLYERF--------------CQLDRNNGGF 46
T +D E+QQ C ++++ V +Y++F D++N GF
Sbjct: 20 TYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGF 79
Query: 47 ISAEEFLSVPEFARLLRMVDGLNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVT 106
I EEF++V LS S TL +K+ + F++YD + +G +T
Sbjct: 80 IHFEEFITV---------------------LSTTS-RGTLEEKLSWAFELYDLNHDGYIT 117
Query: 107 FTDMLDVL 114
F +ML ++
Sbjct: 118 FDEMLTIV 125
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 31/161 (19%)
Query: 1 MGNASSMLTQYDIEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFAR 60
MG +S L++ D+ ++Q F ++EI ++ F L G ++ E+F+ +
Sbjct: 1 MGAKTSKLSKDDLTCLKQST--YFDRREIQQWHKGF--LRDCPSGQLAREDFVKI----- 51
Query: 61 LLRMVDGLNFKEFVAFLSA--FSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLT 118
+K+F F S F+ H +F V+D D NG + F + + VL +
Sbjct: 52 ---------YKQFFPFGSPEDFANH---------LFTVFDKDNNGFIHFEEFITVLSTTS 93
Query: 119 GTFISEKQREQVLTDVLDEAGYTK--DSLMILSDFVKILGN 157
+ EK L+ GY + L I++ K++G+
Sbjct: 94 RGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGS 134
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDL 117
++F E+VA L+ TL K+++ FK+YD D NG + ++LD++ +
Sbjct: 76 IDFLEYVAALN-LVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESI 124
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 70 FKEFVAFLSAFS--PHATLHQKIEFIFKVYDSDGNGKVTFTDMLDV 113
F +F+ F++A + + QK+++ FK+YD+DGNG + ++LD+
Sbjct: 73 FVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDM 118
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
+NF +F+ ++ ++I FK++D D GK++F ++ V ++L E+
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE-- 58
Query: 128 EQVLTDVLDEAGYTKDSLMILSDFVKILGNSGL 160
L +++DEA D + +F++I+ + L
Sbjct: 59 ---LQEMIDEADRDGDGEVSEQEFLRIMKKTSL 88
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 86 LHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
+ +E IFK +D++G+GK++ +++ D LR L T E QR
Sbjct: 1 MADDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQR 42
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 73/153 (47%), Gaps = 24/153 (15%)
Query: 1 MGNASSMLTQYDIEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEF-------- 52
MGN +Y + + + + + +EI L E F + D++ G+I+ +
Sbjct: 1 MGNC----VKYPLRNLSRK-DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMG 55
Query: 53 -----LSVPEFARLLRMVDG--LNFKEFVAFLS----AFSPHATLHQKIEFIFKVYDSDG 101
+ + E ++ + M G ++F +FV + A + +++ F+ +D++G
Sbjct: 56 YMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNG 115
Query: 102 NGKVTFTDMLDVLRDLTGTFISEKQREQVLTDV 134
+G+++ +++ + +R L G + + E+++ DV
Sbjct: 116 DGEISTSELREAMRKLLGHQVGHRDIEEIIRDV 148
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/133 (18%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 21 NHAFSQQEIVSLYERFCQLDRNNGGFISAEEF-------------LSVPEFARLLRMVDG 67
+ + +EI L E F + D++ G+I+ + + + E ++ + M G
Sbjct: 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLG 61
Query: 68 --LNFKEFVAFLS----AFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTF 121
++F +FV + A + +++ F+ +D++G+G+++ +++ + +R L G
Sbjct: 62 GHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQ 121
Query: 122 ISEKQREQVLTDV 134
+ + E+++ DV
Sbjct: 122 VGHRDIEEIIRDV 134
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 20/145 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L + DG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 63
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ + ++I F+V+D DGNG ++ ++ V T + EK +
Sbjct: 64 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVX-----TNLGEKLTD 118
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVK 153
+ + + + EA D + +FV+
Sbjct: 119 EEVDEXIREADIDGDGQVNYEEFVQ 143
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 18/99 (18%)
Query: 28 EIVSLYERFCQLDRNNGGFISAEEFLS----------VPEFARLLRMVDG-----LNFKE 72
EI +L F LD +N G +S++E L P+ ++LR +D +++ +
Sbjct: 55 EINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTD 114
Query: 73 FVAFLSAFSPHATLHQKIEFI-FKVYDSDGNGKVTFTDM 110
F+A + L +++ I FK +D DGNGK++ ++
Sbjct: 115 FLA--ATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEEL 151
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLR 115
++F E+VA LS + QK+ + FK+YD DGNG + ++L++++
Sbjct: 69 IDFMEYVAALS-LVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIK 115
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 90 IEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
+E IFK +D++G+GK++ +++ D LR L T E QR
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQR 41
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/133 (18%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 21 NHAFSQQEIVSLYERFCQLDRNNGGFISAEEF-------------LSVPEFARLLRMVDG 67
+ + +EI L E F + D++ G+I+ + + + E ++ + M G
Sbjct: 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLG 61
Query: 68 --LNFKEFVAFLS----AFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTF 121
++F +FV + A + +++ F+ +D++G+G+++ +++ + +R L G
Sbjct: 62 GHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQ 121
Query: 122 ISEKQREQVLTDV 134
+ + E+++ DV
Sbjct: 122 VGHRDIEEIIRDV 134
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
+NF +F+ ++ ++I FK++D D GK++F ++ V ++L E+
Sbjct: 59 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE-- 116
Query: 128 EQVLTDVLDEAGYTKDSLMILSDFVKIL 155
L +++DEA D + +F++I+
Sbjct: 117 ---LQEMIDEADRDGDGEVSEQEFLRIM 141
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 20/145 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMV-----DG---L 68
++++I E F D++ G I+ +E +V P A L + DG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 64
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
+F EF+ + ++I F+V+D DGNG ++ ++ V T + EK +
Sbjct: 65 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVX-----TNLGEKLTD 119
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVK 153
+ + + EA D + +FV+
Sbjct: 120 EEVDQXIREADIDGDGQVNYEEFVQ 144
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 33/158 (20%)
Query: 28 EIVSLYERFCQLDRNNGGFISAEEFL-SVPEFARL------------------------- 61
E L E F +LD NN G + +E + EF RL
Sbjct: 329 ETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMP 388
Query: 62 LRMVDGLNFKEFVAFLSAFSPHATL--HQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTG 119
L +DG E+ F+++ L +++E FK++D DG+GK++ ++ +
Sbjct: 389 LLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADS 448
Query: 120 TFISEKQREQVLTDVLDEAGYTKDSLMILSDFVKILGN 157
+ E+ L ++++ KD + ++FV++L N
Sbjct: 449 SIQMEE-----LESIIEQVDNNKDGEVDFNEFVEMLQN 481
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFARLLRMV--DGLN--FKE------F 73
SQ+++ L E F +D++ GFI E+ + F+ L R+ D LN KE F
Sbjct: 10 LSQRQMQELKEAFTMIDQDRDGFIGMEDLKDM--FSSLGRVPPDDELNAMLKECPGQLNF 67
Query: 74 VAFLSAFSPHAT---LHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEK 125
AFL+ F + + F ++D DG G + + D+L ++ F E+
Sbjct: 68 TAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEE 122
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 67 GLNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDL 117
++F++FV LS T+H+K+++ F +YD + +G +T +ML +++ +
Sbjct: 145 AIHFEDFVVGLSILL-RGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI 194
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 73 FVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQV-L 131
F S F P F+F +D+DGNG + F D + L L + EK + L
Sbjct: 114 FKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNL 173
Query: 132 TDVLDEAGYTKDSLM-ILSDFVKILG 156
D+ + TK+ ++ I+ ++G
Sbjct: 174 YDINKDGCITKEEMLAIMKSIYDMMG 199
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 73/158 (46%), Gaps = 24/158 (15%)
Query: 17 QQHCNHAFSQQEIVSLYER-FCQLDRNNGGFISAEEFLSV----------PEFARLLRMV 65
QQ AF +E+++ ++ F D + GG IS +E +V E ++ V
Sbjct: 6 QQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEV 65
Query: 66 D-----GLNFKEFVAFL---SAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDL 117
D ++F+EF+ + +++E F+++D + +G + ++ ++LR
Sbjct: 66 DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILR-A 124
Query: 118 TGTFISEKQREQVLTDVLDEAGYTKDSLMILSDFVKIL 155
TG ++E+ E ++ D + D + +F+K++
Sbjct: 125 TGEHVTEEDIEDLMKD----SDKNNDGRIDFDEFLKMM 158
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 19/93 (20%)
Query: 76 FLSAFSPHATLHQKIEF--IFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTD 133
FL F A L +EF I++ YD+D +G ++ ++ + L+DL F+ K++ + +
Sbjct: 90 FLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDL---FLQHKKK--IPPN 144
Query: 134 VLDEAGYT----------KDSLMILSDFVKILG 156
LDE YT KD + L+D +IL
Sbjct: 145 KLDE--YTDAXXKIFDKNKDGRLDLNDLARILA 175
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 69 NFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQRE 128
NF +F+ + ++I FK++D D GK++F ++ V ++L E+
Sbjct: 85 NFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE--- 141
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKILGNSGL 160
L + +DEA D + +F++I + L
Sbjct: 142 --LQEXIDEADRDGDGEVSEQEFLRIXKKTSL 171
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 33.1 bits (74), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 67 GLNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLR---DLTG---- 119
++F++F+ LS T+ +K+ + F +YD + +G +T +MLD+++ D+ G
Sbjct: 118 AVSFEDFIKGLSILL-RGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTY 176
Query: 120 TFISEKQREQVLTDVLDEAGYTKDSLMILSDFVK 153
+ E Q + + KD ++ + +F++
Sbjct: 177 PVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIE 210
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEK 125
+N + F S F P F+F +D+D NG V+F D + L L + EK
Sbjct: 82 VNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEK 139
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 33.1 bits (74), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 87 HQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLM 146
++I F+V+D DGNG ++ D+ V+ T + EK ++ + +++ EA D +
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 60
Query: 147 ILSDFVKIL 155
DFV+++
Sbjct: 61 NYEDFVQMM 69
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 22/115 (19%)
Query: 40 DRNNGGFISAEEFLSVPEFARLLRMVDGLNFKEFVAFLSAFSPHATLHQKIEFIFKVYDS 99
D NN G L + E ARLL + + FL F ++ F++YD
Sbjct: 157 DSNNDGK------LELTEMARLLPVQEN--------FLLKFQGIKMCGKEFNKAFELYDQ 202
Query: 100 DGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLMILSDFVKI 154
DGNG + ++ +L+DL EK ++++ D+ + + Y K+ +M LSD K+
Sbjct: 203 DGNGYIDENELDALLKDLC-----EKNKQEL--DINNISTYKKN-IMALSDGGKL 249
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/96 (19%), Positives = 40/96 (41%), Gaps = 17/96 (17%)
Query: 19 HCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFARLLRMVDGLNFKEFVAFLS 78
C S +E + + ++ D ++ GFI EE + K+ + +
Sbjct: 95 RCQQLKSCEEFMKTWRKY---DTDHSGFIETEELKNF--------------LKDLLEKAN 137
Query: 79 AFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVL 114
L + + + K++DS+ +GK+ T+M +L
Sbjct: 138 KTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 173
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 72 EFVAFLSAFSPHATL--HQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTG-TFISEKQRE 128
E+ F+S L +++ F ++D+D +GK+T + L +L G T ISEK
Sbjct: 417 EYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEE----LANLFGLTSISEK--- 469
Query: 129 QVLTDVLDEAGYTKDSLMILSDFVKIL 155
DVL EA KD+++ +FV ++
Sbjct: 470 -TWNDVLGEADQNKDNMIDFDEFVSMM 495
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 11/107 (10%)
Query: 32 LYERFCQLDRNNGGFIS----AEEFLSV------PEFARLLRMVDG-LNFKEFVAFLSAF 80
+ E F +D+N GFI EEF S+ E +L+ G LNF F++ S
Sbjct: 4 MKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIFSDK 63
Query: 81 SPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
+ I F ++D D K+ + D+L ++ F ++ R
Sbjct: 64 LSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMR 110
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 94 FKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLMILSDFVK 153
FK++D D GK++F ++ V ++L E+ L +++DEA D + +F++
Sbjct: 17 FKLFDDDETGKISFKNLKRVAKELGENLTDEE-----LQEMIDEADRDGDGEVSEQEFLR 71
Query: 154 ILGNSGL 160
I+ + L
Sbjct: 72 IMKKTSL 78
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 38/150 (25%)
Query: 3 NASSMLTQYDIEEVQQHCNHAFSQQ----EIVSLYERFCQL--------DRNNGGFISAE 50
+ + L + D E+ QH AF + E+ +L F L + G ++ E
Sbjct: 19 DGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEE 78
Query: 51 EFLSVPE----------FARLL------------RMVDG-LNFKEFVAFLSAFSPHATLH 87
+F+ V E F R+L + DG +N EF A+L+A
Sbjct: 79 QFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEA 138
Query: 88 QKIEFIFKVYDSDGNGKVTFTDMLDVLRDL 117
+ F D++GNG+++ ++L +RD
Sbjct: 139 AEA---FNQVDTNGNGELSLDELLTAVRDF 165
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFI--FKVYDSDGNGKVTFTDMLDVLRDLTGTFISEK 125
++F+ F+ L A + + +++ F+V+D +GNGKV ++ VL L G ++E+
Sbjct: 65 VDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTL-GEKMTEE 123
Query: 126 QREQVLTDVLDEAG 139
+ E VL D G
Sbjct: 124 EVETVLAGHEDSNG 137
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDL 117
++F EF+ ++ ++I F+V+D DGNG ++ ++ V+ +L
Sbjct: 18 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 67
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 25 SQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFARLLRM-------------------- 64
SQ E L F ++D+N G + E + + L+RM
Sbjct: 330 SQDETKELTAIFHKMDKNGDGQLDRAEL--IEGYKELMRMKGQDASMLDASAVEHEVDQV 387
Query: 65 VDGLNFK-----EFVAFLSAFSPHATL--HQKIEFIFKVYDSDGNGKVTFTDMLDV 113
+D ++F E+ F++ TL +++E F+++DSD +GK++ T++ +
Sbjct: 388 LDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI 443
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 25 SQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFARLLRM-------------------- 64
SQ E L F ++D+N G + E + + L+RM
Sbjct: 353 SQDETKELTAIFHKMDKNGDGQLDRAEL--IEGYKELMRMKGQDASMLDASAVEHEVDQV 410
Query: 65 VDGLNFK-----EFVAFLSAFSPHATL--HQKIEFIFKVYDSDGNGKVTFTDMLDV 113
+D ++F E+ F++ TL +++E F+++DSD +GK++ T++ +
Sbjct: 411 LDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI 466
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 25/37 (67%)
Query: 81 SPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDL 117
S T+H+K+++ F +YD + +G +T +ML +++ +
Sbjct: 2 SHMGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSI 38
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 25 SQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFARLLRM-------------------- 64
SQ E L F ++D+N G + E + + L+RM
Sbjct: 354 SQDETKELTAIFHKMDKNGDGQLDRAEL--IEGYKELMRMKGQDASMLDASAVEHEVDQV 411
Query: 65 VDGLNFK-----EFVAFLSAFSPHATL--HQKIEFIFKVYDSDGNGKVTFTDMLDV 113
+D ++F E+ F++ TL +++E F+++DSD +GK++ T++ +
Sbjct: 412 LDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI 467
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
+N + F + F PH ++F +D+ G V F D + L L + EK R
Sbjct: 69 VNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLR 128
Query: 128 EQVLTDVLDEAGYTKDSLMILSDFVKIL 155
+++ GY M+ D VK +
Sbjct: 129 WTFNLYDINKDGYINKEEMM--DIVKAI 154
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 87 HQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLM 146
++I F+V+D DGNG ++ ++ V+ T + EK ++ + +++ EA D +
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 55
Query: 147 ILSDFVKIL 155
+FV+++
Sbjct: 56 NYEEFVQMM 64
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 87 HQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLM 146
++I F+V+D DGNG ++ ++ V+ T + EK ++ + +++ EA D +
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 58
Query: 147 ILSDFVKIL 155
+FV+++
Sbjct: 59 NYEEFVQMM 67
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 26/113 (23%)
Query: 25 SQQEIVSLYERFCQLDRNNGGFISAEEFL-----------SVPEFARLLRMVDGL----- 68
SQ+E L + F +D+N G + +E + +V + ++ VD +
Sbjct: 58 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD 117
Query: 69 -------NFKEFVAFLSAFSPHATLHQ-KIEFIFKVYDSDGNGKVTFTDMLDV 113
++ EFV A + L + K+E F+ +D DGNGK++ ++ V
Sbjct: 118 FDRNGYIDYSEFVTV--AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV 168
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 30.0 bits (66), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 87 HQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLM 146
++I F+V+D DGNG ++ ++ V+ T + EK ++ + +++ EA D +
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 58
Query: 147 ILSDFVKIL 155
+FV+++
Sbjct: 59 NYEEFVQMM 67
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 17/126 (13%)
Query: 21 NHAFSQQEIVSLYERFCQLDRNNGGFISAEEF--------LSVPEFARLLRMVDG----- 67
N +++ +YE F D NN GF+ E +P+ +L ++D
Sbjct: 14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPK-REILDLIDEYDSEG 72
Query: 68 ---LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISE 124
+ + +F + +I+ F+++D D GK++ ++ V ++L T E
Sbjct: 73 RHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDE 132
Query: 125 KQREQV 130
+ R +
Sbjct: 133 ELRAMI 138
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 87 HQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLM 146
++I F+V+D DGNG ++ ++ V+ T + EK ++ + +++ EA D +
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 59
Query: 147 ILSDFVKIL 155
+FV+++
Sbjct: 60 NYEEFVQMM 68
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
+N + F + F PH ++F +D+ G V F D + L L + EK R
Sbjct: 36 VNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLR 95
Query: 128 EQVLTDVLDEAGYTKDSLMILSDFVKIL 155
+++ GY M+ D VK +
Sbjct: 96 WTFNLYDINKDGYINKEEMM--DIVKAI 121
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 29.6 bits (65), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 87 HQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLM 146
++I F+V+D DGNG ++ ++ V+ T + EK ++ + +++ EA D +
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 61
Query: 147 ILSDFVKIL 155
+FV+++
Sbjct: 62 NYEEFVQMM 70
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 29.6 bits (65), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 12/128 (9%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEF---------LSVP--EFARLLRMVDG-LNFK 71
F + EI E F +D+N G I ++ L+V E +++ G +NF
Sbjct: 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFT 60
Query: 72 EFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVL 131
F+ A I FKV D DG G + + + ++L G F E+ +
Sbjct: 61 VFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWA 120
Query: 132 TDVLDEAG 139
D AG
Sbjct: 121 AFPPDVAG 128
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 29.3 bits (64), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 87 HQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLM 146
++I F+V+D DGNG ++ ++ V+ T + EK ++ + +++ EA D +
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 62
Query: 147 ILSDFVKIL 155
+FV+++
Sbjct: 63 NYEEFVQMM 71
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 29.3 bits (64), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 26/113 (23%)
Query: 25 SQQEIVSLYERFCQLDRNNGGFISAEEFL-----------SVPEFARLLRMVDGL----- 68
SQ+E L + F +D+N G + +E + +V + ++ VD +
Sbjct: 341 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD 400
Query: 69 -------NFKEFVAFLSAFSPHATLHQ-KIEFIFKVYDSDGNGKVTFTDMLDV 113
++ EFV A + L + K+E F+ +D DGNGK++ ++ V
Sbjct: 401 FDRNGYIDYSEFVTV--AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV 451
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
+N F + F PH ++F +D+ G V F D + L L + EK R
Sbjct: 33 VNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLR 92
Query: 128 EQVLTDVLDEAGYTKDSLMILSDFVKIL 155
+++ GY M+ D VK +
Sbjct: 93 WTFNLYDINKDGYINKEEMM--DIVKAI 118
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
+N F + F PH ++F +D+ G V F D + L L + EK R
Sbjct: 33 VNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLR 92
Query: 128 EQVLTDVLDEAGYTKDSLMILSDFVKIL 155
+++ GY M+ D VK +
Sbjct: 93 WTFNLYDINKDGYINKEEMM--DIVKAI 118
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 12/128 (9%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEF---------LSVP--EFARLLRMVDG-LNFK 71
F + EI E F +D+N G I ++ L+V E +++ G +NF
Sbjct: 19 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFT 78
Query: 72 EFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVL 131
F+ A I FKV D DG G + + + ++L G F E+ +
Sbjct: 79 VFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWA 138
Query: 132 TDVLDEAG 139
D AG
Sbjct: 139 AFPPDVAG 146
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 86 LHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISE 124
+ Q++ F++YD +GNG ++ M ++L +L T SE
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSE 39
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 14/130 (10%)
Query: 12 DIEEVQQHCNHAFS---QQEIVSLYERFCQLDRNNGGFIS----AEEFLSV------PEF 58
D E Q+ ++ F+ Q+ + + E F +D+N GFI E F S+ E
Sbjct: 2 DKERAQRATSNVFARLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKEL 61
Query: 59 ARLLRMVDG-LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDL 117
+L+ G LNF F++ S + I F ++D K+ + D+L ++
Sbjct: 62 TAMLKEAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENM 121
Query: 118 TGTFISEKQR 127
F ++ R
Sbjct: 122 GDNFNKDEMR 131
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 76 FLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISE 124
FL + Q++ F++YD +GNG ++ M ++L +L T SE
Sbjct: 79 FLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSE 127
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 11/115 (9%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFIS----AEEFLSV------PEFARLLRMVDG-LNFKE 72
Q++I + E F +D+N GFI E F S+ E +L+ G LNF
Sbjct: 13 LPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTM 72
Query: 73 FVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQR 127
F++ S + I F ++D K+ + D+L ++ F ++ R
Sbjct: 73 FLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMR 127
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 94 FKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLMILSDFVK 153
FKV+D DGNG ++ ++ V+ T + EK + + +++ EA D + +FV+
Sbjct: 14 FKVFDRDGNGLISAAELRHVM-----TNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 68
Query: 154 IL 155
++
Sbjct: 69 MM 70
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 17/126 (13%)
Query: 21 NHAFSQQEIVSLYERFCQLDRNNGGFISAEEF--------LSVPEFARLLRMVD-----G 67
N +++ +YE F D NN GF+ E +P+ +L ++D G
Sbjct: 14 NSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPK-REILDLIDEYDSEG 72
Query: 68 LNFKEFVAFLSAFSPHATLHQKIEFI---FKVYDSDGNGKVTFTDMLDVLRDLTGTFISE 124
+ ++ F ++ I F+++D D GK++ ++ V ++L T E
Sbjct: 73 RHLXKYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDE 132
Query: 125 KQREQV 130
+ R +
Sbjct: 133 ELRAXI 138
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 58 FARLLRMVDG-LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTD 109
F +L DG ++++E AF+S+ P Q ++ IFK D DGNG++ +
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPIKN-EQLLQLIFKAIDIDGNGEIDLAE 57
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 30/115 (26%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEF----------LSVPEFARLLRMVD-----GL 68
S++EI L E F +D +N G I+ +E L E L+ D +
Sbjct: 4 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 63
Query: 69 NFKEFVAFLSAFSPHATLH-QKIE------FIFKVYDSDGNGKVTFTDMLDVLRD 116
++ EF+A AT+H K+E F +D DG+G +T ++ +D
Sbjct: 64 DYGEFIA--------ATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKD 110
Score = 26.2 bits (56), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 93 IFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLMILSDFV 152
+FK+ D+D +G +TF ++ D L+ + + E + D++D A K + +F+
Sbjct: 15 LFKMIDTDNSGTITFDELKDGLKRVGSELM-----ESEIKDLMDAADIDKSGTIDYGEFI 69
>pdb|2VRP|A Chain A, Structure Of Rhodocytin
pdb|3BX4|A Chain A, Crystal Structure Of The Snake Venom Toxin Aggretin
pdb|3BX4|C Chain C, Crystal Structure Of The Snake Venom Toxin Aggretin
Length = 136
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 18 QHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFARLLRMVDGLNFKEFV 74
QHC AF++Q+ E+FC+ N S E + L+ D L +++V
Sbjct: 14 QHCYQAFNEQKTWDEAEKFCRAQENGAHLASIESNGEADFVSWLISQKDELADEDYV 70
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 22/91 (24%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFARLLRMVDGLNFKEFVAFLSAFSPH 83
S+++IV E F D++ G I+ EE A ++R +D
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEEL------ATVIRSLD----------------Q 41
Query: 84 ATLHQKIEFIFKVYDSDGNGKVTFTDMLDVL 114
++++ + D+DGNG + F + L ++
Sbjct: 42 NPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 22/91 (24%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFARLLRMVDGLNFKEFVAFLSAFSPH 83
S+++IV E F D++ G I+ EE A ++R +D
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEEL------ATVIRSLD----------------Q 41
Query: 84 ATLHQKIEFIFKVYDSDGNGKVTFTDMLDVL 114
++++ + D+DGNG + F + L ++
Sbjct: 42 NPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 91 EFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLMILSD 150
E IFK +D++G+GK++ +++ D L+ L E +R D D G+ S +D
Sbjct: 14 ERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDT-DGDGFI--SFDEFTD 70
Query: 151 FVKILGNSGLKMEV 164
F + N GL +V
Sbjct: 71 FAR--ANRGLVKDV 82
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Query: 12 DIEEVQQHCNHAFS---QQEIVSLYERFCQLDRNNGGFIS----AEEFLSV------PEF 58
D E Q+ + F+ Q+ + + E F +D+N GFI E F S+ E
Sbjct: 2 DKERAQRATXNVFARLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKEL 61
Query: 59 ARLLRMVDG-LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDL 117
+L+ G LNF F++ S + I F ++D K+ + D+L ++
Sbjct: 62 TAMLKEAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENM 121
Query: 118 TGTFISEKQR 127
F ++ R
Sbjct: 122 GDNFNKDEMR 131
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 25/90 (27%)
Query: 25 SQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFARLLRMVDGLNFKEFVAFLSAFSPHA 84
S++E+ L+ F DRN G+I AE E A + R A H
Sbjct: 91 SEEELAELFRIF---DRNADGYIDAE------ELAEIFR---------------ASGEHV 126
Query: 85 TLHQKIEFIFKVYDSDGNGKVTFTDMLDVL 114
T ++IE + K D + +G++ F + L ++
Sbjct: 127 T-DEEIESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 88 QKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLMI 147
++I FKV+D DGNG ++ ++ +R L ++ + +V+ LD G D +
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSL--GYMPNEVELEVIIQRLDMDG---DGQVD 90
Query: 148 LSDFVKILG 156
+FV +LG
Sbjct: 91 FEEFVTLLG 99
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 26 QQEIVSLYERFCQLDRNNGGFISAEEFLSVP-EFARLLRMVD--GLNFKEFVAFLSAFSP 82
Q + L E + +L R G S + +V E ++L VD + E+ F++
Sbjct: 351 QLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAXD 410
Query: 83 HATL--HQKIEFIFKVYDSDGNGKVTFTDMLDV 113
TL +++E F+ +DSD +GK++ T++ +
Sbjct: 411 RKTLLSRERLERAFRXFDSDNSGKISSTELATI 443
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 94 FKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLMILSDFVK 153
FKV+D D NG ++ +++ V+ +L G +++++ EQ++ EA D + +FVK
Sbjct: 10 FKVFDKDQNGYISASELRHVMINL-GEKLTDEEVEQMIK----EADLDGDGQVNYEEFVK 64
Query: 154 IL 155
++
Sbjct: 65 MM 66
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 87 HQKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLM 146
++I F+V D DGNG ++ ++ V+ T + EK ++ + +++ EA D +
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 82
Query: 147 ILSDFVKIL 155
+FV+++
Sbjct: 83 NYEEFVQMM 91
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 13 IEEVQQHCNHAFSQQEIVSLYERFCQLDRNNGGFISAEEF 52
I++ +H S++EI L E F +D +N G I+ +E
Sbjct: 6 IDDDDKHMAERLSEEEIGGLKELFKMIDTDNSGTITFDEL 45
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 94 FKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLMILSDFVK 153
FKV+D D NG ++ +++ V+ +L G +++++ EQ++ EA D + +FVK
Sbjct: 15 FKVFDKDQNGYISASELRHVMINL-GEKLTDEEVEQMIK----EADLDGDGQVNYEEFVK 69
Query: 154 IL 155
++
Sbjct: 70 MM 71
>pdb|2E3X|B Chain B, Crystal Structure Of Russell's Viper Venom
Metalloproteinase
Length = 134
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 19/48 (39%)
Query: 20 CNHAFSQQEIVSLYERFCQLDRNNGGFISAEEFLSVPEFARLLRMVDG 67
C F + + ERFC NNG +S E A+LL G
Sbjct: 14 CYRVFKEHKTWEAAERFCMEHPNNGHLVSIESMEEAEFVAKLLSNTTG 61
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 12/94 (12%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEF---------LSVP--EFARLLRMVDG-LNFK 71
F Q +I E F +D+N G I ++ L+V E +++ G +NF
Sbjct: 6 FDQTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFT 65
Query: 72 EFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKV 105
F+ A I FKV D DG G +
Sbjct: 66 VFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSI 99
>pdb|1KB0|A Chain A, Crystal Structure Of Quinohemoprotein Alcohol
Dehydrogenase From Comamonas Testosteroni
Length = 677
Score = 27.3 bits (59), Expect = 3.8, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 36 FCQLDRNNGGFISAEEFLSV 55
F LDR NG FISA+ F+ V
Sbjct: 339 FFVLDRTNGKFISAKNFVPV 358
>pdb|3OKW|A Chain A, Mouse Semaphorin 6a, Extracellular Domains 1-2
pdb|3OKW|B Chain B, Mouse Semaphorin 6a, Extracellular Domains 1-2
pdb|3OKY|B Chain B, Plexin A2 In Complex With Semaphorin 6a
Length = 565
Score = 26.9 bits (58), Expect = 4.9, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 97 YDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDE 137
Y+S V DMLD+ TG F +K + T V DE
Sbjct: 304 YNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDE 344
>pdb|3AFC|A Chain A, Mouse Semaphorin 6a Extracellular Domain
pdb|3AFC|B Chain B, Mouse Semaphorin 6a Extracellular Domain
pdb|3AL8|A Chain A, Plexin A2 SEMAPHORIN 6A COMPLEX
Length = 556
Score = 26.9 bits (58), Expect = 4.9, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 97 YDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDE 137
Y+S V DMLD+ TG F +K + T V DE
Sbjct: 305 YNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDE 345
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 94 FKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLMILSDFVK 153
F+V+D D NG ++ ++ V+ T + EK ++ + +++ EA D + +FVK
Sbjct: 10 FRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 64
Query: 154 IL 155
++
Sbjct: 65 VM 66
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 81 SPHATLHQKIEF--IFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEA 138
S + T Q EF F ++D D NG ++ +++ V+R L G SE + + D+++E
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAE----VNDLMNEI 55
Query: 139 GYTKDSLMILSDFVKILG 156
+ + S+F+ ++
Sbjct: 56 DVDGNHQIEFSEFLALMS 73
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMVDG--------- 67
FS+++ E F DR G I + V P A +++++
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 62
Query: 68 -LNFKEFVAFLSAFSPHATLHQKIEFI--FKVYDSDGNGKVTFTDMLDVLRDLTGTFISE 124
L F++F+ + + + +++ +V+D +GNG V ++ VL L G ++E
Sbjct: 63 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTL-GEKMTE 121
Query: 125 KQREQVLTDVLDEAG---YTKDSLMILS 149
++ EQ++ D G Y + M+LS
Sbjct: 122 EEVEQLVAGHEDSNGCINYEELVRMVLS 149
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 24 FSQQEIVSLYERFCQLDRNNGGFISAEEFLSV-------PEFARLLRMVDG--------- 67
FS+++ E F DR G I + V P A +++++
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 68 -LNFKEFVAFLSAFSPHATLHQKIEFI--FKVYDSDGNGKVTFTDMLDVLRDLTGTFISE 124
L F++F+ + + + +++ +V+D +GNG V ++ VL L G ++E
Sbjct: 61 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTL-GEKMTE 119
Query: 125 KQREQVLTDVLDEAG---YTKDSLMILS 149
++ EQ++ D G Y + M+LS
Sbjct: 120 EEVEQLVAGHEDSNGCINYEELVRMVLS 147
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 23/109 (21%)
Query: 25 SQQEIVSLYERFCQLDRNNGGFISAEEFL--------------SVPEFARLLRMVDG--- 67
+++E+ ++ E ++D + G I EEFL S E A R+ D
Sbjct: 51 TKEELDAIIE---EVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNAD 107
Query: 68 --LNFKEFVAFLSAFSPHATLHQKIEFIFKVYDSDGNGKVTFTDMLDVL 114
++ +E A H T ++IE + K D + +G++ F + L ++
Sbjct: 108 GYIDAEELAEIFRASGEHVT-DEEIESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 85 TLHQKIEF--IFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTK 142
T Q EF F ++D DG+G +T ++ V+R L + E L D+++E
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-----GQNPTEAELQDMINEVDADG 59
Query: 143 DSLMILSDFVKILG 156
D + +F+ ++
Sbjct: 60 DGTIDFPEFLTMMA 73
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 89 KIEFIFKVYDSDGNGKVTFTDMLDVLRDL 117
+I+ F+++D D +GKV+ ++ LR L
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSL 34
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 85 TLHQKIEF--IFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTK 142
T Q EF F +YD DG+G +T ++ V+R L G +E + + ++ +V + T
Sbjct: 5 TEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSL-GLNPTEAELQDMINEVDADGNGTI 63
Query: 143 DSLMILSDFVKIL 155
D L+ +I+
Sbjct: 64 DFPEFLTMMARIM 76
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 83 HATLHQKIEFIFKVYDSDGNGKVTFTDMLDVLRDL 117
H + E IFK +D++G+GK++ ++ + L+ L
Sbjct: 4 HPQDKAERERIFKRFDANGDGKISAAELGEALKTL 38
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 26.2 bits (56), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 88 QKIEFIFKVYDSDGNGKVTFTDMLDVLRDLTGTFISEKQREQVLTDVLDEAGYTKDSLMI 147
+ ++ F+ +D DG+G +T ++ + L E+ L ++ EA +D +
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEE-----LDAMIREADVDQDGRVN 60
Query: 148 LSDFVKILGNS 158
+F ++L
Sbjct: 61 YEEFARMLAQE 71
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,741,872
Number of Sequences: 62578
Number of extensions: 183847
Number of successful extensions: 976
Number of sequences better than 100.0: 191
Number of HSP's better than 100.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 584
Number of HSP's gapped (non-prelim): 245
length of query: 169
length of database: 14,973,337
effective HSP length: 92
effective length of query: 77
effective length of database: 9,216,161
effective search space: 709644397
effective search space used: 709644397
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)