Your job contains 1 sequence.
>030923
MREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDS
SSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEAR
SREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030923
(169 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2075676 - symbol:AT3G47120 species:3702 "Arabi... 260 2.1e-22 1
DICTYBASE|DDB_G0288797 - symbol:fip1l1 "cleavage and poly... 137 4.0e-10 2
WB|WBGene00018926 - symbol:F56A11.6 species:6239 "Caenorh... 139 9.5e-09 1
ZFIN|ZDB-GENE-030131-1495 - symbol:zrsr2 "zinc finger (CC... 136 3.9e-08 1
UNIPROTKB|E1C591 - symbol:PPIG "Uncharacterized protein" ... 134 7.9e-08 1
MGI|MGI:1919414 - symbol:Rbmx2 "RNA binding motif protein... 126 1.5e-07 1
ZFIN|ZDB-GENE-040426-2822 - symbol:ppig "peptidyl-prolyl ... 129 2.4e-07 1
FB|FBgn0031273 - symbol:CG2839 species:7227 "Drosophila m... 127 5.0e-07 1
ZFIN|ZDB-GENE-040426-1619 - symbol:zc3h13 "zinc finger CC... 125 2.0e-06 1
TAIR|locus:2132358 - symbol:AT4G02720 "AT4G02720" species... 122 2.0e-06 1
UNIPROTKB|G5EHZ9 - symbol:MGCH7_ch7g1102 "Uncharacterized... 120 5.7e-06 1
UNIPROTKB|G4NKC1 - symbol:MGG_03086 "U2 snRNP component I... 119 6.4e-06 1
UNIPROTKB|G4NGT8 - symbol:MGG_17707 "Uncharacterized prot... 122 6.6e-06 1
ZFIN|ZDB-GENE-040718-457 - symbol:snrnp27 "small nuclear ... 110 7.4e-06 1
UNIPROTKB|F1NHR6 - symbol:ZRSR2 "Uncharacterized protein"... 120 7.6e-06 1
TAIR|locus:2206001 - symbol:AT1G60900 species:3702 "Arabi... 119 1.6e-05 1
FB|FBgn0036619 - symbol:Cpr72Ec "Cuticular protein 72Ec" ... 118 1.7e-05 1
CGD|CAL0000980 - symbol:orf19.4330 species:5476 "Candida ... 119 2.0e-05 1
UNIPROTKB|Q5AG50 - symbol:CaO19.4330 "Putative uncharacte... 119 2.0e-05 1
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 117 2.9e-05 2
DICTYBASE|DDB_G0282873 - symbol:DDB_G0282873 "RNA-binding... 119 3.0e-05 1
WB|WBGene00013917 - symbol:ZC504.3 species:6239 "Caenorha... 118 3.2e-05 1
UNIPROTKB|G4NEH6 - symbol:MGG_00102 "Cell cycle control p... 118 3.5e-05 1
TAIR|locus:2076121 - symbol:AT3G23900 species:3702 "Arabi... 111 3.7e-05 2
UNIPROTKB|Q15696 - symbol:ZRSR2 "U2 small nuclear ribonuc... 116 4.0e-05 1
UNIPROTKB|E1C1G5 - symbol:ZC3H18 "Uncharacterized protein... 97 4.4e-05 2
UNIPROTKB|E1BXC5 - symbol:ZC3H13 "Uncharacterized protein... 119 5.4e-05 1
UNIPROTKB|K7GKM6 - symbol:RPTN "Uncharacterized protein" ... 116 6.3e-05 1
UNIPROTKB|G5E5I0 - symbol:RBMX2 "Uncharacterized protein"... 113 6.5e-05 1
ZFIN|ZDB-GENE-030131-6117 - symbol:dido1 "death inducer-o... 120 6.7e-05 1
FB|FBgn0004924 - symbol:Top1 "Topoisomerase 1" species:72... 117 7.2e-05 1
RGD|1309863 - symbol:Nsrp1 "nuclear speckle splicing regu... 115 7.3e-05 1
FB|FBgn0031883 - symbol:CG11266 species:7227 "Drosophila ... 115 8.2e-05 1
ZFIN|ZDB-GENE-040426-1146 - symbol:traf3ip1 "TNF receptor... 115 8.9e-05 1
DICTYBASE|DDB_G0274361 - symbol:prpf38a "putative U4/U6.U... 114 9.3e-05 1
MGI|MGI:2144305 - symbol:Ccdc55 "coiled-coil domain conta... 114 0.00010 1
DICTYBASE|DDB_G0268004 - symbol:snrp70 "U1 small nuclear ... 113 0.00011 1
UNIPROTKB|I3LF64 - symbol:ZRSR2 "Uncharacterized protein"... 113 0.00011 1
UNIPROTKB|Q06A99 - symbol:SRSF4 "SFRS4" species:9823 "Sus... 113 0.00012 1
UNIPROTKB|G4MRF7 - symbol:MGG_02411 "Uncharacterized prot... 112 0.00012 1
UNIPROTKB|B4DH15 - symbol:DDX23 "cDNA FLJ54028, highly si... 93 0.00013 1
WB|WBGene00002957 - symbol:let-858 species:6239 "Caenorha... 115 0.00014 1
UNIPROTKB|Q17336 - symbol:let-858 "Pre-mRNA-splicing fact... 115 0.00014 1
UNIPROTKB|Q9H0G5 - symbol:NSRP1 "Nuclear speckle splicing... 113 0.00014 1
UNIPROTKB|J9NS11 - symbol:ZC3H18 "Uncharacterized protein... 93 0.00014 2
UNIPROTKB|F1ST35 - symbol:RPTN "Uncharacterized protein" ... 113 0.00014 1
UNIPROTKB|E2QSN7 - symbol:ZC3H18 "Uncharacterized protein... 93 0.00014 2
TAIR|locus:2087347 - symbol:AT3G25840 species:3702 "Arabi... 115 0.00015 1
UNIPROTKB|E2RSE4 - symbol:PPIG "Uncharacterized protein" ... 114 0.00015 1
UNIPROTKB|J9PAE8 - symbol:PPIG "Uncharacterized protein" ... 114 0.00015 1
RGD|1559763 - symbol:Zrsr2 "zinc finger (CCCH type), RNA ... 111 0.00016 2
UNIPROTKB|G4NEX9 - symbol:MGG_00716 "Microfibril-associat... 112 0.00017 1
UNIPROTKB|Q86VM9 - symbol:ZC3H18 "Zinc finger CCCH domain... 92 0.00020 2
UNIPROTKB|G4MZ88 - symbol:MGG_08192 "Uncharacterized prot... 114 0.00023 1
UNIPROTKB|G4N9S1 - symbol:MGG_10681 "Peptidyl-prolyl cis-... 111 0.00024 1
UNIPROTKB|J9P1V6 - symbol:J9P1V6 "Uncharacterized protein... 105 0.00025 1
RGD|1303257 - symbol:Zc3h18 "zinc finger CCCH-type contai... 91 0.00026 2
UNIPROTKB|Q6TQE1 - symbol:Zc3h18 "Zinc finger CCCH domain... 91 0.00026 2
DICTYBASE|DDB_G0267796 - symbol:DDB_G0267796 "initiation ... 113 0.00027 1
UNIPROTKB|B4DJ96 - symbol:LUC7L3 "Luc7-like protein 3" sp... 109 0.00027 1
UNIPROTKB|H0YA81 - symbol:LUC7L3 "Luc7-like protein 3" sp... 105 0.00028 1
UNIPROTKB|F1Q0J3 - symbol:CALD1 "Uncharacterized protein"... 112 0.00029 1
TAIR|locus:2165447 - symbol:U2AF35B species:3702 "Arabido... 107 0.00032 1
UNIPROTKB|F8VVA2 - symbol:DDX23 "Probable ATP-dependent R... 103 0.00033 1
UNIPROTKB|J9NYY3 - symbol:FLG2 "Uncharacterized protein" ... 116 0.00033 1
FB|FBgn0027617 - symbol:CG5808 species:7227 "Drosophila m... 111 0.00035 1
DICTYBASE|DDB_G0279535 - symbol:DDB_G0279535 "DUF1777 fam... 107 0.00035 1
ASPGD|ASPL0000028535 - symbol:AN5535 species:162425 "Emer... 111 0.00037 1
UNIPROTKB|Q3SX41 - symbol:LUC7L3 "Luc7-like protein 3" sp... 109 0.00037 1
UNIPROTKB|O95232 - symbol:LUC7L3 "Luc7-like protein 3" sp... 109 0.00037 1
UNIPROTKB|Q5R8W6 - symbol:LUC7L3 "Luc7-like protein 3" sp... 109 0.00037 1
MGI|MGI:1914934 - symbol:Luc7l3 "LUC7-like 3 (S. cerevisi... 109 0.00037 1
UNIPROTKB|P08621 - symbol:SNRNP70 "U1 small nuclear ribon... 109 0.00038 1
TAIR|locus:2162107 - symbol:AT5G55670 species:3702 "Arabi... 111 0.00038 1
FB|FBgn0031493 - symbol:CG3605 species:7227 "Drosophila m... 111 0.00041 1
FB|FBgn0033438 - symbol:Mmp2 "Matrix metalloproteinase 2"... 111 0.00042 1
RGD|1307981 - symbol:Luc7l3 "LUC7-like 3 (S. cerevisiae)"... 109 0.00043 1
ZFIN|ZDB-GENE-110411-31 - symbol:rbm27 "RNA binding motif... 112 0.00045 1
WB|WBGene00021295 - symbol:Y25C1A.8 species:6239 "Caenorh... 107 0.00046 1
UNIPROTKB|E1BC96 - symbol:ZC3H18 "Uncharacterized protein... 89 0.00047 2
UNIPROTKB|F1NSZ3 - symbol:LUC7L "Uncharacterized protein"... 107 0.00048 1
UNIPROTKB|E1C6U8 - symbol:LUC7L3 "Uncharacterized protein... 108 0.00050 1
DICTYBASE|DDB_G0284245 - symbol:DDB_G0284245 "CCHC-type z... 107 0.00051 1
MGI|MGI:1914171 - symbol:Prpf38b "PRP38 pre-mRNA processi... 109 0.00052 1
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 112 0.00055 1
UNIPROTKB|Q8WUQ7 - symbol:CACTIN "Cactin" species:9606 "H... 110 0.00056 1
RGD|1306493 - symbol:Wdr60 "WD repeat domain 60" species:... 111 0.00058 1
UNIPROTKB|F1LMQ9 - symbol:Rbmx2 "RNA-binding motif protei... 106 0.00059 1
RGD|1562693 - symbol:Rbmx2 "RNA binding motif protein, X-... 106 0.00060 1
RGD|1561347 - symbol:Srsf4 "serine/arginine-rich splicing... 108 0.00060 1
UNIPROTKB|F1LSN0 - symbol:Srsf4 "Protein Sfrs4" species:1... 108 0.00060 1
ZFIN|ZDB-GENE-031112-4 - symbol:stm "starmaker" species:7... 109 0.00061 1
TAIR|locus:2024852 - symbol:CYP59 "cyclophilin 59" specie... 108 0.00063 1
MGI|MGI:1923264 - symbol:Zc3h18 "zinc finger CCCH-type co... 88 0.00063 2
DICTYBASE|DDB_G0289719 - symbol:DDB_G0289719 "SFRS2-inter... 112 0.00065 1
TAIR|locus:2101714 - symbol:U1-70K "AT3G50670" species:37... 107 0.00066 1
CGD|CAL0000983 - symbol:orf19.4332 species:5476 "Candida ... 112 0.00068 1
UNIPROTKB|Q5AGI7 - symbol:CaO19.11806 "Putative uncharact... 112 0.00068 1
WB|WBGene00015207 - symbol:B0495.8 species:6239 "Caenorha... 99 0.00069 2
UNIPROTKB|F1RK00 - symbol:ZC3H13 "Uncharacterized protein... 112 0.00071 1
WARNING: Descriptions of 17 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2075676 [details] [associations]
symbol:AT3G47120 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00642 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AL133292
EMBL:BT002472 EMBL:BT010369 IPI:IPI00540994 PIR:T45648
RefSeq:NP_190296.1 UniGene:At.35841 HSSP:Q9V535
ProteinModelPortal:Q9SD61 SMR:Q9SD61 IntAct:Q9SD61 PaxDb:Q9SD61
PRIDE:Q9SD61 EnsemblPlants:AT3G47120.1 GeneID:823865
KEGG:ath:AT3G47120 TAIR:At3g47120 eggNOG:COG0724
HOGENOM:HOG000174091 InParanoid:Q9SD61 KO:K13107 OMA:GHEEDRS
PhylomeDB:Q9SD61 ProtClustDB:CLSN2915690 Genevestigator:Q9SD61
Uniprot:Q9SD61
Length = 352
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 75/178 (42%), Positives = 99/178 (55%)
Query: 2 REERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGG-PQDRSSRWGHEKFEGF-----SW 55
RE RGVCRAFQRGECTRGD CKFSH+E+RAA TG G +DRSS+W +K G S+
Sbjct: 180 REGRGVCRAFQRGECTRGDSCKFSHDEKRAATTGWGHEEDRSSKWDQDKLNGAKKGGTSF 239
Query: 56 GKN--------DSSSRATGSGRVALEGNPNQSDR--REEK--RSI-RHDHREKPREDHGR 102
G + S R G G + G P + +R RE+ RS +D +E+ R GR
Sbjct: 240 GNRGDFKPDVEEKSYRGRGDGDASY-GRPKERERVDREDMGPRSRDAYDMKEQKRS--GR 296
Query: 103 REDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGD 160
++ SRRH+D ++ RED R + KR ++ES R+ DR D+ S R D
Sbjct: 297 YDNAYSRRHNDEIDYV---REDKGSRAQDWEKR-KAESR-RDRNDREEKDRDSLRRED 349
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 74/185 (40%), Positives = 93/185 (50%)
Query: 2 REERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGG-PQDRSSRWGHEKF-EG------F 53
RE RGVCRAFQRGECTRGD CKFSH+E+RAANTG G +DRSS+W H+K EG F
Sbjct: 130 REARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSKWDHDKNREGRGVCRAF 189
Query: 54 SWG---KNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRR 110
G + DS + R A G ++ DR + + + +K G R D +
Sbjct: 190 QRGECTRGDSCKFSHDEKRAATTGWGHEEDRSSKWDQDKLNGAKKGGTSFGNRGDFKP-- 247
Query: 111 HSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGD------KSSTGRGDSS-S 163
D E R R D RPK E E RED R D + +GR D++ S
Sbjct: 248 --DVEEKSYRGRGDG-DASYGRPK--ERERVDREDMGPRSRDAYDMKEQKRSGRYDNAYS 302
Query: 164 HRHRE 168
RH +
Sbjct: 303 RRHND 307
>DICTYBASE|DDB_G0288797 [details] [associations]
symbol:fip1l1 "cleavage and polyadenylation
specificity factor FIP1" species:44689 "Dictyostelium discoideum"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0006379 "mRNA cleavage"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=ISS] dictyBase:DDB_G0288797 GO:GO:0006378
GenomeReviews:CM000154_GR EMBL:AAFI02000125 GO:GO:0005847
GO:GO:0006379 eggNOG:COG5213 InterPro:IPR007854 Pfam:PF05182
RefSeq:XP_636526.1 EnsemblProtists:DDB0233703 GeneID:8626811
KEGG:ddi:DDB_G0288797 InParanoid:Q54IF1 OMA:AYCERQN Uniprot:Q54IF1
Length = 560
Score = 137 (53.3 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 40/121 (33%), Positives = 57/121 (47%)
Query: 49 KFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRS 108
++E S N+ S GS R E + + S R + R R RE+ R+D R E +RS
Sbjct: 356 QYEDDSNNNNNGSGSGGGSDRRRNESS-SSSSRGDSDRGERE--RERDRDDRDRSERERS 412
Query: 109 RRHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
R D +E E R + R D R +R S+ R D+D+ SS+ SSS R +
Sbjct: 413 DR--DRSERERSDRSERERSDRDRSERERSDRSERSDRDKTSSSSSSSNNNSSSSTRGSD 470
Query: 169 R 169
R
Sbjct: 471 R 471
Score = 117 (46.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 48/159 (30%), Positives = 64/159 (40%)
Query: 18 RGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGS-GRVALEGNP 76
RG G +S Q ++ S G ++ S + SSSR G E +
Sbjct: 345 RGSGRTYSTTNQYEDDSNNNNNGSGSGGGSDRRRNES---SSSSSRGDSDRGERERERDR 401
Query: 77 NQSDRREEKRSIRHDHREKPREDHGRRE----DKRSRRHSDNNEFEARSREDHYRRDEKR 132
+ DR E +RS R D E+ R D RE D+ R SD +E RS D
Sbjct: 402 DDRDRSERERSDR-DRSERERSDRSERERSDRDRSERERSDRSE---RSDRDKTSSSSSS 457
Query: 133 PKRHESESYLREDQ-DR-RGGDKSSTGRGDS-SSHRHRE 168
+ S S D+ DR RGGD+ T S S R R+
Sbjct: 458 SNNNSSSSTRGSDRYDRERGGDRDRTSESSSRGSDRDRD 496
Score = 117 (46.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 47/158 (29%), Positives = 65/158 (41%)
Query: 25 SHNEQRAANTGGGPQDR-------SSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPN 77
S+N + +GGG R SSR ++ E D R+
Sbjct: 361 SNNNNNGSGSGGGSDRRRNESSSSSSRGDSDRGERERERDRDDRDRSERERSDRDRSERE 420
Query: 78 QSDRREEKRSIRHDHREKPREDHGRREDK---RSRRHSDNNEFEARSR-EDHYRRDEKRP 133
+SDR E +RS R D E+ R D R D+ S S NN + +R D Y R+
Sbjct: 421 RSDRSERERSDR-DRSERERSDRSERSDRDKTSSSSSSSNNNSSSSTRGSDRYDRERGGD 479
Query: 134 KRHESESYLR-EDQDRRG-GDKSSTGRGDSSSHRHRER 169
+ SES R D+DR +SS+ G SSS +R
Sbjct: 480 RDRTSESSSRGSDRDRDDYKSRSSSNTGGSSSSLRSDR 517
Score = 39 (18.8 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 17 TRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEK 49
T G G K+ +Q GGG +S ++K
Sbjct: 116 TPGSGGKYMLTKQTPTGGGGGGSGFNSAKSNQK 148
>WB|WBGene00018926 [details] [associations]
symbol:F56A11.6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
GO:GO:0009792 EMBL:FO080624 GeneTree:ENSGT00700000104144
RefSeq:NP_499950.3 EnsemblMetazoa:F56A11.6 GeneID:176884
KEGG:cel:CELE_F56A11.6 UCSC:F56A11.6 CTD:176884 WormBase:F56A11.6
eggNOG:NOG250747 InParanoid:O44519 OMA:SHHEKER NextBio:894440
Uniprot:O44519
Length = 419
Score = 139 (54.0 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 46/151 (30%), Positives = 63/151 (41%)
Query: 25 SHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKND---SSSRATGSGRVALEGNPNQSDR 81
S ++ + GG + RS R H+K ++D S SR R ++ DR
Sbjct: 248 SRQDRERDRSRGGEKSRSPRKSHQKSVDRDKTRSDKDRSRSRKDREDRDRERSRKDREDR 307
Query: 82 -REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESES 140
RE R R D K RED R ++ R + E RSR+D RD R + +
Sbjct: 308 DRERSRKEREDRSRKDREDRERERSRKEREDRSRKDRE-RSRQDREDRDRDRDRDRSRKD 366
Query: 141 YLREDQD--RRGGDKSSTGRGDSSSHRHRER 169
R+D+ RR D S R D S RER
Sbjct: 367 --RDDKSCSRRSRDDRSEERKDRKSRDDRER 395
Score = 121 (47.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 36 GGPQDRSSRWGHE---KFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDH 92
G P D R E + E K+ S R R + ++S E+ RS R H
Sbjct: 211 GPPSDDDRRRDEEDRRRTEDVDRSKDRSLKRREERSRSRQDRERDRSRGGEKSRSPRKSH 270
Query: 93 REKPREDHGRREDKRSRRHSDNNEFEA-RSREDHYRRDEKRPKRHESESYLREDQDRRGG 151
++ D R + RSR D + + RSR+D RD +R R E E R+D++ R
Sbjct: 271 QKSVDRDKTRSDKDRSRSRKDREDRDRERSRKDREDRDRER-SRKEREDRSRKDREDRER 329
Query: 152 DKSSTGRGDSSSHRHRER 169
++S R D S + RER
Sbjct: 330 ERSRKEREDRS-RKDRER 346
>ZFIN|ZDB-GENE-030131-1495 [details] [associations]
symbol:zrsr2 "zinc finger (CCCH type), RNA-binding
motif and serine/arginine rich 2" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
ZFIN:ZDB-GENE-030131-1495 GO:GO:0005634 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 PANTHER:PTHR12620
GeneTree:ENSGT00530000063193 CTD:8233 EMBL:CR848805 IPI:IPI00899441
RefSeq:XP_001920562.1 UniGene:Dr.116918 UniGene:Dr.77318
Ensembl:ENSDART00000081319 GeneID:100005490 KEGG:dre:100005490
NextBio:20786710 Uniprot:E7F2A1
Length = 635
Score = 136 (52.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 49/168 (29%), Positives = 74/168 (44%)
Query: 2 REERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSS 61
R + +C F R +C +G C F H + N DR ++ GFS S
Sbjct: 319 RWKTAICGLFDRRKCPKGKHCNFLHVFRNPDNEFW-EADRDLHMSPDRGGGFS--ARHMS 375
Query: 62 SRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARS 121
R G + GN S+R + +R+ R H + GRR R RR S + E +RS
Sbjct: 376 GR---DGMWSQRGN--SSERFQRRRTDRRSHSRERYSYRGRRSRSRERR-SRSRERRSRS 429
Query: 122 REDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
RE R E++ + E +S R + R+ ++S R S+S R + R
Sbjct: 430 RERRSRSRERQNRNRERQSRSRSREKRKS--ENSIRR--STSQREQSR 473
>UNIPROTKB|E1C591 [details] [associations]
symbol:PPIG "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 GO:GO:0005634
GO:GO:0005737 GO:GO:0006457 GO:GO:0003755 SUPFAM:SSF50891
GO:GO:0000413 GeneTree:ENSGT00550000074595 OMA:NKKFDHE
EMBL:AADN02020271 IPI:IPI00602148 Ensembl:ENSGALT00000015996
Uniprot:E1C591
Length = 747
Score = 134 (52.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 49/160 (30%), Positives = 72/160 (45%)
Query: 17 TRGDGCKFSHNEQRAANTGGGPQDRSSRWG--HEKFEGFSW------GKNDSSSRATGSG 68
+RG + S +++R+ G +R R EK + S GK+ SSSR
Sbjct: 502 SRGRDKERSRSKERSRRAGSRSNERDHRKSKDREKHKSRSREREHARGKHSSSSRTRERS 561
Query: 69 RVALEGNPNQSDRREEKRSIRHDH-REKPREDHGRREDKRSRRHSDNNEFEARSREDHYR 127
+ G +S R+ RS ++ R + RE RR R RR + + R RE+ R
Sbjct: 562 KSRDRGRRGRSRSRDRDRSRSKEYSRNRDRESRRRRSRSRERRGTPDRY---RGRENRRR 618
Query: 128 RDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHR 167
R+ + +R ES+S RE R +SS R DS S R R
Sbjct: 619 RNSRSSEREESQSRNRERYSNRES-RSSYKRNDSESQRKR 657
Score = 116 (45.9 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 44/171 (25%), Positives = 75/171 (43%)
Query: 3 EERGVCRAFQRG-ECTRG---DGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGF-SWGK 57
++RG R+ + E +R D H+E+R + + ++R EK + + S G+
Sbjct: 450 KKRGKSRSHSKSREKSRSKERDSKHSRHDEKRRSRS----KERDREKDREKEKHYDSRGR 505
Query: 58 NDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEF 117
+ SR+ R A N+ D R+ K +H R + RE H R + S R + ++
Sbjct: 506 DKERSRSKERSRRA-GSRSNERDHRKSKDREKHKSRSRERE-HARGKHSSSSRTRERSKS 563
Query: 118 EARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
R R R ++ R + S R+ + RR +S RG +R RE
Sbjct: 564 RDRGRRGRSRSRDRDRSRSKEYSRNRDRESRRRRSRSRERRGTPDRYRGRE 614
Score = 111 (44.1 bits), Expect = 0.00041, P = 0.00041
Identities = 43/173 (24%), Positives = 73/173 (42%)
Query: 4 ERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKN-DSSS 62
E+ R+ +R E RG S +R+ + G + RS ++ + +N D S
Sbjct: 535 EKHKSRSRER-EHARGKHSSSSRTRERSKSRDRGRRGRSRSRDRDRSRSKEYSRNRDRES 593
Query: 63 RATGSGRVALEGNPNQSDRREEKR------SIRHDHREKPREDHGRREDKRSRRHSDNNE 116
R S G P++ RE +R S R + + + RE + RE + S + +D+
Sbjct: 594 RRRRSRSRERRGTPDRYRGRENRRRRNSRSSEREESQSRNRERYSNRESRSSYKRNDSES 653
Query: 117 FEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKS--STGRGDSSSHRHR 167
R + H + P+ + + R DQDR K S+ +S S+ HR
Sbjct: 654 QRKRHSKSH---ESSSPESSKGKKSSR-DQDRSPDSKKRPSSKERESKSYSHR 702
Score = 110 (43.8 bits), Expect = 0.00055, P = 0.00055
Identities = 44/159 (27%), Positives = 66/159 (41%)
Query: 12 QRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVA 71
+RGE + K S ++ R D+ +R K G S + S ++ R +
Sbjct: 415 RRGEKEKKKDHK-SSSKDRETRRNLEKDDKHNR-SKTKKRGKSRSHSKSREKSRSKERDS 472
Query: 72 LEGNPNQSDRREEKRSIRHDHREKPREDHGRREDK-RSRRHSDNNEFEARSREDHYRRDE 130
++ R K R REK + R DK RSR + +RS E +R+ +
Sbjct: 473 KHSRHDEKRRSRSKERDREKDREKEKHYDSRGRDKERSRSKERSRRAGSRSNERDHRKSK 532
Query: 131 KRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
R K H+S S RE + RG SS+ + S R R R
Sbjct: 533 DREK-HKSRS--REREHARGKHSSSSRTRERSKSRDRGR 568
>MGI|MGI:1919414 [details] [associations]
symbol:Rbmx2 "RNA binding motif protein, X-linked 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1919414 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000174091 KO:K13107
EMBL:AL672042 GeneTree:ENSGT00600000084414 CTD:51634
HOVERGEN:HBG056427 OrthoDB:EOG4FJ8B4 EMBL:AK076115 EMBL:AK168018
EMBL:BC026976 IPI:IPI00261255 RefSeq:NP_775552.1 UniGene:Mm.32561
ProteinModelPortal:Q8R0F5 SMR:Q8R0F5 STRING:Q8R0F5
PhosphoSite:Q8R0F5 PRIDE:Q8R0F5 Ensembl:ENSMUST00000033433
GeneID:209003 KEGG:mmu:209003 UCSC:uc009tct.1 InParanoid:A2AF74
NextBio:372506 Bgee:Q8R0F5 CleanEx:MM_RBMX2 Genevestigator:Q8R0F5
GermOnline:ENSMUSG00000031107 Uniprot:Q8R0F5
Length = 326
Score = 126 (49.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 48 EKFEGFSWGKNDSSSR-ATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDK 106
EK EG + + S SR AT + + S + E R+ + +HRE ++ H D
Sbjct: 173 EKTEGQAQAEQPSCSRSATVKEKKDERASRKHSSKTSE-RAQKSEHRES-KKSHSGSPDG 230
Query: 107 RSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLRE-DQDRRGGDKSSTGRGDSSSHR 165
RS H+ + E ++R++ + + K R E+E RE ++ R G S RG S
Sbjct: 231 RSSYHARAEDPECKARKEKPKHEHKSASRREAEEKSRERERGRSSGTHSGRHRGHSDGRS 290
Query: 166 HRER 169
HR R
Sbjct: 291 HRSR 294
>ZFIN|ZDB-GENE-040426-2822 [details] [associations]
symbol:ppig "peptidyl-prolyl isomerase G
(cyclophilin G)" species:7955 "Danio rerio" [GO:0006457 "protein
folding" evidence=IEA] [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072
ZFIN:ZDB-GENE-040426-2822 GO:GO:0006457 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 KO:K09566 CTD:9360 HOVERGEN:HBG048162
HOGENOM:HOG000115659 HSSP:Q27450 EMBL:BC044189 IPI:IPI00493837
RefSeq:NP_998629.1 UniGene:Dr.18174 ProteinModelPortal:Q7ZYY1
SMR:Q7ZYY1 PRIDE:Q7ZYY1 GeneID:406773 KEGG:dre:406773
InParanoid:Q7ZYY1 NextBio:20818287 ArrayExpress:Q7ZYY1 Bgee:Q7ZYY1
Uniprot:Q7ZYY1
Length = 687
Score = 129 (50.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 35/109 (32%), Positives = 49/109 (44%)
Query: 62 SRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHS-DNNEFEAR 120
SR+ G G+ + + R R + HR + RE R D RR S DN E R
Sbjct: 550 SRSRGRGQRGQSRDRGRDRRHSSSRERKTSHRSRSRE-RARGRDAEDRRKSADNKSRETR 608
Query: 121 SREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
R+ R K + S RED+ +R DKS TG DS + + ++R
Sbjct: 609 GRD----RSSKERSSQKQRSREREDRQKRRKDKSDTGSSDSDNDKRKKR 653
>FB|FBgn0031273 [details] [associations]
symbol:CG2839 species:7227 "Drosophila melanogaster"
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR001304
Pfam:PF00059 PROSITE:PS50041 SMART:SM00034 EMBL:AE014134
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 HSSP:P22897
GeneTree:ENSGT00700000104356 RefSeq:NP_608540.1
ProteinModelPortal:Q9VPS3 SMR:Q9VPS3 EnsemblMetazoa:FBtr0077999
GeneID:33244 KEGG:dme:Dmel_CG2839 UCSC:CG2839-RA
FlyBase:FBgn0031273 eggNOG:NOG243297 OMA:RIMEKER OrthoDB:EOG4DBRWH
PhylomeDB:Q9VPS3 GenomeRNAi:33244 NextBio:782628
ArrayExpress:Q9VPS3 Uniprot:Q9VPS3
Length = 826
Score = 127 (49.8 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 63 RATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSR 122
R G+ E + RREE++ + REK R D RR ++ RR + E R R
Sbjct: 522 RRREEGKRKEEERREKERRREEEKRKEEERREKERRDEERRREEERRREEERRREEERRR 581
Query: 123 EDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
E+ RR+E+R + E + RE++ RR ++ R RE
Sbjct: 582 EEERRREEERRREEERK---REEERRREEERRREEERRREEERRRE 624
Score = 126 (49.4 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 73 EGNPNQSDRREEKRSI--RHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDE 130
E +++R+EE+R R E+ RE+ RRE+KR R + + E R E+ R++E
Sbjct: 438 EERREEAERKEEERKAEERRKKEERRREEKRRREEKRRREEEERRKEEERREEEEKRKEE 497
Query: 131 KRPKRHES--ESYLREDQDRRGGDKS-STGRGDSSSHRHRER 169
+R K E E R++++RR ++ G+ R +ER
Sbjct: 498 ERRKDEERRREEEKRKEEERREKERRREEGKRKEEERREKER 539
Score = 121 (47.7 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 34/99 (34%), Positives = 50/99 (50%)
Query: 73 EGNPNQSDRREEKRSIRHDHR---EKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD 129
E + +RR+E+R + R E+ RE+ RRE++R RR + E R RE+ RR+
Sbjct: 548 EEERREKERRDEERRREEERRREEERRREEERRREEER-RREEERRREEERKREEERRRE 606
Query: 130 EKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
E+R R E E RE++ RR +K R RE
Sbjct: 607 EER--RREEERR-REEERRREEEKRKEEERRKEEERKRE 642
Score = 116 (45.9 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 33/99 (33%), Positives = 46/99 (46%)
Query: 73 EGNPNQSDRREEKRSIRHDHR---EKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD 129
E + RREE+R + R E+ RE+ RRE++R R E E R E+ R +
Sbjct: 584 ERRREEERRREEERKREEERRREEERRREEERRREEERRREEEKRKEEERRKEEERKREE 643
Query: 130 EKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
EKR K E + RE++ RR +K R RE
Sbjct: 644 EKR-KEEERK---REEERRREEEKRKEEERRKEEERKRE 678
Score = 116 (45.9 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 31/106 (29%), Positives = 52/106 (49%)
Query: 69 RVALEGNPNQSDRREEKRSIRHDHR---EKPREDHGRREDKRSRRHSDNNEFEARSREDH 125
R A E + RREEKR R E+ R++ RRE++ R+ + + E R RE+
Sbjct: 451 RKAEERRKKEERRREEKRRREEKRRREEEERRKEEERREEEEKRKEEERRKDEERRREEE 510
Query: 126 YRRDE-KRPKRHESESYLREDQDRRGGDKS-STGRGDSSSHRHRER 169
R++E +R K E R++++RR ++ + R +ER
Sbjct: 511 KRKEEERREKERRREEGKRKEEERREKERRREEEKRKEEERREKER 556
Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 73 EGNPNQSDRREEKRSIRHDHR---EKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD 129
E + RREE+R + R E+ RE+ RRE++R R E E R RE+ RR+
Sbjct: 560 ERRREEERRREEERRREEERRREEERRREEERRREEERKREEERRRE-EERRREEERRRE 618
Query: 130 EKRPKRHES---ESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
E+R + E E +E++ +R +K R RE
Sbjct: 619 EERRREEEKRKEEERRKEEERKREEEKRKEEERKREEERRRE 660
Score = 112 (44.5 bits), Expect = 0.00034, P = 0.00034
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 73 EGNPNQSDRREEKRSIRHDHR---EKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD 129
E + +REE+R + R E+ +E+ RE++R R H+ E E R RE+ R++
Sbjct: 317 ERKREEERKREEERKREEERRKEEERKKEEEREREEERKREHNRKKE-EERKREEKRRKE 375
Query: 130 EKRPKRHE--SESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
E++ K E E +E++ R+ ++ R R +R
Sbjct: 376 EEKRKEEERRKEEERKEEERRKEEERKEEERRKEEERRKEKR 417
Score = 112 (44.5 bits), Expect = 0.00034, P = 0.00034
Identities = 33/121 (27%), Positives = 53/121 (43%)
Query: 57 KNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHR----EKPREDHGRREDKRSRRHS 112
KN R R E + +RR E+ R + R E+ RE+ +RE++R R
Sbjct: 276 KNQGKPRIMEKERSKEEEKRKEEERRREEERKREEERKREEERKREEERKREEERKREEE 335
Query: 113 DNNEFEARSREDHYRRDEKRPKRH---ESESYLREDQDRRGGDK-SSTGRGDSSSHRHRE 168
E E R +E+ R+E+R + H + E RE++ R+ +K R + E
Sbjct: 336 RRKE-EERKKEEEREREEERKREHNRKKEEERKREEKRRKEEEKRKEEERRKEEERKEEE 394
Query: 169 R 169
R
Sbjct: 395 R 395
Score = 111 (44.1 bits), Expect = 0.00046, P = 0.00046
Identities = 31/102 (30%), Positives = 48/102 (47%)
Query: 73 EGNPNQSDRREEKRSIRHDHR---EKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD 129
E + RREE+R + R EK +E+ R+E++R R E E R RE+ RR+
Sbjct: 602 ERRREEERRREEERRREEERRREEEKRKEEERRKEEERKREEEKRKE-EERKREEERRRE 660
Query: 130 EKRPK---RHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
E++ K R + E RE++ R+ + R RE
Sbjct: 661 EEKRKEEERRKEEERKREEEKRKEEKRKREEEKRKKEERKRE 702
Score = 111 (44.1 bits), Expect = 0.00046, P = 0.00046
Identities = 38/169 (22%), Positives = 66/169 (39%)
Query: 2 REERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSS 61
R E + +R E R + + E++A + + R EK + +
Sbjct: 424 RREEEKRKEEERKEEERREEAERKEEERKAEER----RKKEERRREEKRRREEKRRREEE 479
Query: 62 SRATGSGRVALEGNPNQSDRR--EEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEA 119
R R E + +RR EE+R +E+ R + RR ++ R+ + E E
Sbjct: 480 ERRKEEERREEEEKRKEEERRKDEERRREEEKRKEEERREKERRREEGKRKEEERREKER 539
Query: 120 RSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
R E+ + +E+R K E RE++ RR ++ R RE
Sbjct: 540 RREEEKRKEEERREKERRDEERRREEERRREEERRREEERRREEERRRE 588
Score = 110 (43.8 bits), Expect = 0.00063, P = 0.00063
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 78 QSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDE---KRPK 134
+ +RR+E+ R + EK +E+ RR+D+ RR + + E R RE RR+E K +
Sbjct: 478 EEERRKEEE--RREEEEKRKEEE-RRKDEERRREEEKRKEEER-REKERRREEGKRKEEE 533
Query: 135 RHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
R E E RE++ R+ ++ R D R ER
Sbjct: 534 RREKERR-REEEKRKEEERREKERRDEERRREEER 567
Score = 110 (43.8 bits), Expect = 0.00063, P = 0.00063
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 77 NQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRH 136
++ RREE++ + +E+ R + R+++ R+ + + E R RE+ RR+EKR +
Sbjct: 420 DEKRRREEEKRKEEERKEEERREEAERKEEE-RKAEERRKKEERRREEKRRREEKRRREE 478
Query: 137 ES---ESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
E E RE++++R K R D R E+
Sbjct: 479 EERRKEEERREEEEKR---KEEERRKDEERRREEEK 511
Score = 110 (43.8 bits), Expect = 0.00063, P = 0.00063
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 73 EGNPNQSDRREEKRSIRHDHR---EKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD 129
E + R+EE+R + R E+ RE+ RRE+++ R+ + + E R RE+ R++
Sbjct: 626 EKRKEEERRKEEERKREEEKRKEEERKREEERRREEEK-RKEEERRKEEERKREEEKRKE 684
Query: 130 EKRPKRHES---ESYLREDQDRRGGDKS--STGRGDSSSHRHRER 169
EKR + E E RE++ R+ ++ R + + ER
Sbjct: 685 EKRKREEEKRKKEERKREEEKRKEDERKREEEKRKEEEKRKEEER 729
>ZFIN|ZDB-GENE-040426-1619 [details] [associations]
symbol:zc3h13 "zinc finger CCCH-type containing
13" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 ZFIN:ZDB-GENE-040426-1619
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00700000104144 CTD:23091
HOVERGEN:HBG107115 EMBL:BX005426 EMBL:BX088652 IPI:IPI00609889
RefSeq:NP_956816.2 UniGene:Dr.76587 Ensembl:ENSDART00000054064
GeneID:560041 KEGG:dre:560041 HOGENOM:HOG000039963 OMA:CCKALCA
NextBio:20883262 ArrayExpress:B0S5D8 Bgee:B0S5D8 Uniprot:B0S5D8
Length = 1759
Score = 125 (49.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/173 (29%), Positives = 77/173 (44%)
Query: 2 REERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSS 61
+EER R R E R D + NE R TG G S EK G + D+S
Sbjct: 622 QEERSYGRGHGR-EDMRNDARTDNRNESRVERTGRGRGHGSDVT--EKARGSRASQADNS 678
Query: 62 SRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARS 121
S SG + E ++S E+ + R+ R++ +D R E R R +NE R
Sbjct: 679 S---ASGHDSWE---SRSSGLRERSTERNTDRDR-YDDRPRGEQPRDERRGAHNE---RD 728
Query: 122 REDHYRRDEKRP----KRHESESYLREDQ-DRRGGDKSSTGRGDSSSHRHRER 169
R D+ R+++ P +++ E RE++ D R D+ R D + R +ER
Sbjct: 729 RRDNREREQRAPSPVRQQNRGEDLEREERRDDRRNDRGDDRRDDRTREREKER 781
Score = 120 (47.3 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 43/169 (25%), Positives = 69/169 (40%)
Query: 3 EERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSS 62
+ R R + G RG G S ++A + D SS GH+ +E S G + S+
Sbjct: 643 DNRNESRVERTGR-GRGHG---SDVTEKARGSRASQADNSSASGHDSWESRSSGLRERST 698
Query: 63 RATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSR 122
+ R + P R+E+R H E+ R D+ RE + N E R
Sbjct: 699 ERN-TDRDRYDDRPRGEQPRDERRGA---HNERDRRDNREREQRAPSPVRQQNRGEDLER 754
Query: 123 EDHYRRDEKRPKRHES--ESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
E+ RRD++R R + + RE + R ++ + R +ER
Sbjct: 755 EE--RRDDRRNDRGDDRRDDRTREREKERDREREREREREKEREREKER 801
>TAIR|locus:2132358 [details] [associations]
symbol:AT4G02720 "AT4G02720" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 InterPro:IPR009269 PANTHER:PTHR13087
Pfam:PF06047 EMBL:AY075686 EMBL:AY102143 IPI:IPI00531384
RefSeq:NP_192181.2 UniGene:At.34274 IntAct:Q8S9I4 PRIDE:Q8S9I4
EnsemblPlants:AT4G02720.1 GeneID:828193 KEGG:ath:AT4G02720
TAIR:At4g02720 HOGENOM:HOG000243180 InParanoid:Q8S9I4 OMA:PALDNEP
PhylomeDB:Q8S9I4 ProtClustDB:CLSN2714409 Genevestigator:Q8S9I4
Uniprot:Q8S9I4
Length = 422
Score = 122 (48.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 39/144 (27%), Positives = 64/144 (44%)
Query: 27 NEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKR 86
N + GG +D +S+ G E+ GK+DS S + G + ++S RR KR
Sbjct: 77 NADEIQDKNGGERDDNSK-GKERK-----GKSDSESESDGLRSRKRKSKSSRSKRRR-KR 129
Query: 87 SIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQ 146
S D + E ED+R RR S + ++RS ++ R K S+S D+
Sbjct: 130 SYDSDSESEGSESDSEEEDRRRRRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDSDESSDE 189
Query: 147 DRRGG-DKSSTGRGDSSSHRHRER 169
D + SS+G + + + + R
Sbjct: 190 DSKAEISASSSGEEEDTKSKSKRR 213
>UNIPROTKB|G5EHZ9 [details] [associations]
symbol:MGCH7_ch7g1102 "Uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] GO:GO:0043581 EMBL:CM000230
EMBL:CM001237 InterPro:IPR019339 Pfam:PF10197 SMART:SM01083
InterPro:IPR022209 Pfam:PF12542 RefSeq:XP_003720497.1
EnsemblFungi:MGG_10324T0 GeneID:2681899 KEGG:mgr:MGG_10324
Uniprot:G5EHZ9
Length = 386
Score = 120 (47.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 43/148 (29%), Positives = 63/148 (42%)
Query: 20 DGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQS 79
DG K E+R + DR R H++ S ++ S R R E P
Sbjct: 172 DGVKKERREKRR-HRHRDEDDRDRR--HKRRRSHSRHRSPSRERHDDRRRHRSEDRPRDD 228
Query: 80 DRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYR-RDEKRPKRHES 138
+RR +R + R++PR+D RR RS R R ++ H + RD+ R +R S
Sbjct: 229 ERRSSRRDDSRE-RDRPRDD--RRY--RSTRDDSTERNRPRDKDRHRQGRDDSRERRRHS 283
Query: 139 ESYLREDQDRRGGDKSSTGRGDSSSHRH 166
+ R D DR G D+ R S R+
Sbjct: 284 D---RRDTDRTGRDERDRPRHSYSGGRN 308
Score = 107 (42.7 bits), Expect = 0.00056, P = 0.00056
Identities = 34/119 (28%), Positives = 51/119 (42%)
Query: 54 SWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSD 113
S G +D + R + + DRR ++R HR RE H R RS
Sbjct: 167 SMGIDDGVKKERREKRRHRHRDEDDRDRRHKRRRSHSRHRSPSRERHDDRRRHRSEDRPR 226
Query: 114 NNEFEARSREDHYRRDEKRP-KRHESESYLREDQDR-RGGDKSSTGRGDSSSHR-HRER 169
++E + R+D RD R +R+ S +++R R D+ GR DS R H +R
Sbjct: 227 DDERRSSRRDDSRERDRPRDDRRYRSTRDDSTERNRPRDKDRHRQGRDDSRERRRHSDR 285
>UNIPROTKB|G4NKC1 [details] [associations]
symbol:MGG_03086 "U2 snRNP component IST3" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:CM001237 KO:K13107 RefSeq:XP_003720587.1
ProteinModelPortal:G4NKC1 EnsemblFungi:MGG_03086T0 GeneID:2682639
KEGG:mgr:MGG_03086 Uniprot:G4NKC1
Length = 330
Score = 119 (46.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 31/90 (34%), Positives = 45/90 (50%)
Query: 82 REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARS-REDHYRRDEKRPK-RHESE 139
RE+K+S R ++ R + SR+H + ++ EA S R+ RRDE R + R +
Sbjct: 191 REQKKSSRRKDKDGSRSSRHHHHHRTSRKHREESDDEAGSDRKRRKRRDESRSRERRRRD 250
Query: 140 SYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
Y +D+ R D S R DS R RER
Sbjct: 251 DYKDKDKHR---DSDSRRRDDSKDRRRRER 277
>UNIPROTKB|G4NGT8 [details] [associations]
symbol:MGG_17707 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CM001236
RefSeq:XP_003719815.1 EnsemblFungi:MGG_17707T0 GeneID:12986241
KEGG:mgr:MGG_17707 Uniprot:G4NGT8
Length = 1008
Score = 122 (48.0 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 56/189 (29%), Positives = 76/189 (40%)
Query: 2 REERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSS 61
R+ G R R TR H+ Q + P DR SR + + S+ ++ S
Sbjct: 457 RDRGGRDRERSRDRHTRDRSRARDHSRQSRIDERRRP-DRRSRSPRPRRDSRSY-RDRSR 514
Query: 62 SRATGSGRVALEGNPNQSDRREEKRS-----IRHDHREKPREDHGRREDKRSRRHSDNNE 116
SR R + + DRR+++R IR D R R D GR++D+R RH D
Sbjct: 515 SRVKTDRRDERSRSRTRVDRRDDRRDRSRSRIRRDDRRDERRD-GRKDDRRDNRHDDR-- 571
Query: 117 FEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKS-----STGRG-----------D 160
R R D R + P+R S S R +RRG D+ ST R D
Sbjct: 572 ---RDRRDQSRSRARSPRRARSSS--RRATERRGADRGVSPTRSTWRQRSRSRARSPRRD 626
Query: 161 SSSHRHRER 169
S HR R
Sbjct: 627 RSRHRDNSR 635
>ZFIN|ZDB-GENE-040718-457 [details] [associations]
symbol:snrnp27 "small nuclear ribonucleoprotein 27
(U4/U6.U5)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] ZFIN:ZDB-GENE-040718-457
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397
GeneTree:ENSGT00700000104061 EMBL:BC076105 IPI:IPI00493242
RefSeq:NP_001002703.1 UniGene:Dr.77831 STRING:Q6DH74
Ensembl:ENSDART00000051655 GeneID:436976 KEGG:dre:436976 CTD:11017
eggNOG:NOG137437 HOVERGEN:HBG094352 KO:K12846 OMA:NIKKPRR
OrthoDB:EOG480HZF NextBio:20831397 ArrayExpress:Q6DH74 Bgee:Q6DH74
InterPro:IPR013957 Pfam:PF08648 Uniprot:Q6DH74
Length = 158
Score = 110 (43.8 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 33/87 (37%), Positives = 46/87 (52%)
Query: 81 RREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESES 140
RRE +RS R R++ R RRE +RSR D + +RSR H RR + P+RH S S
Sbjct: 11 RRERRRS-RSSSRDRERR---RRERERSRSR-DRDRRRSRSRSPHRRRS-RSPRRHRSSS 64
Query: 141 Y--LREDQDRRGGDKSSTGRGDSSSHR 165
LR+ +DRR D+ + H+
Sbjct: 65 LSPLRQ-KDRRDDDRKDVKEKPAKVHQ 90
>UNIPROTKB|F1NHR6 [details] [associations]
symbol:ZRSR2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 PANTHER:PTHR12620 GeneTree:ENSGT00530000063193
OMA:EDAFIEE EMBL:AADN02011332 IPI:IPI00585296
Ensembl:ENSGALT00000026711 Uniprot:F1NHR6
Length = 459
Score = 120 (47.3 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 50/168 (29%), Positives = 68/168 (40%)
Query: 2 REERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWG---KN 58
R + +C F+R +C RG C F H + N +R R E+ S +N
Sbjct: 293 RWKTAICGLFERQKCPRGKHCNFLHVFKNP-NNEFWEANRDIRVSPERTNQLSKNSERRN 351
Query: 59 DSSSRAT--GSGRVALEGNPNQSDRRE-EKRSIRHDHREKPREDHGR-REDKRSRRHSDN 114
SS R G R +P+ S RR E ++ + K R GR R +R R S
Sbjct: 352 RSSHRDDYYGRSRRRSSPSPDHSYRRNGESERKKNRRKNKRRRRSGRSRSRERRRSRSRG 411
Query: 115 NEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSS 162
+ RSR Y R R R S S + R G K S+ RG +S
Sbjct: 412 RKRRGRSRSRSYSRTRSR-SRSRSSS-----RSRSRGKKRSSSRGRNS 453
>TAIR|locus:2206001 [details] [associations]
symbol:AT1G60900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000504
InterPro:IPR006529 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:AC018908 HSSP:P26368 eggNOG:NOG298004
HOGENOM:HOG000180745 KO:K12837 TIGRFAMs:TIGR01642 EMBL:AY140014
IPI:IPI00528167 PIR:E96634 RefSeq:NP_176287.3 UniGene:At.17780
UniGene:At.52293 ProteinModelPortal:Q8L716 SMR:Q8L716 PaxDb:Q8L716
PRIDE:Q8L716 EnsemblPlants:AT1G60900.1 GeneID:842382
KEGG:ath:AT1G60900 GeneFarm:4545 TAIR:At1g60900 InParanoid:Q8L716
OMA:TQMGGLP PhylomeDB:Q8L716 ProtClustDB:CLSN2918395
Genevestigator:Q8L716 Uniprot:Q8L716
Length = 589
Score = 119 (46.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 43/165 (26%), Positives = 68/165 (41%)
Query: 19 GDGCKFS---HNEQRAA-NTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEG 74
GDG S HNE + + +D SR H+ + S K G + +
Sbjct: 8 GDGVAISTENHNENYISLESSPFHEDSKSRESHDLKKDSS--KISEKDNENGRDKDGNKD 65
Query: 75 NPNQSDRREEKRSIRHDHREKPRE-DHGRREDK-RSRRHSDNNEFEARSR--------ED 124
+ DR EK R + + R+ D R +D+ R R H D + +R R +D
Sbjct: 66 RDREKDRDREKSRDRDREKSRDRDRDRERSKDRQRDRHHRDRHRDRSRERSEKRDDLDDD 125
Query: 125 HYRRDEKRPKRH--ESESYLREDQDRRGGDKSSTGRGDSSSHRHR 167
H+RR R +R + + +R + R +S + R S HRH+
Sbjct: 126 HHRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSEHRHK 170
>FB|FBgn0036619 [details] [associations]
symbol:Cpr72Ec "Cuticular protein 72Ec" species:7227
"Drosophila melanogaster" [GO:0005214 "structural constituent of
chitin-based cuticle" evidence=ISS] InterPro:IPR000618 Pfam:PF00379
PROSITE:PS00233 PROSITE:PS51155 EMBL:AE014296 GO:GO:0042302
EMBL:AY069040 RefSeq:NP_648884.1 UniGene:Dm.2319
EnsemblMetazoa:FBtr0075424 GeneID:39816 KEGG:dme:Dmel_CG4784
UCSC:CG4784-RA CTD:39816 FlyBase:FBgn0036619 eggNOG:NOG270263
GeneTree:ENSGT00700000105804 InParanoid:Q9VV46 OMA:FYSYVDA
OrthoDB:EOG400017 GenomeRNAi:39816 NextBio:815531 Uniprot:Q9VV46
Length = 429
Score = 118 (46.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 77 NQSDRRE-EKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 135
N+ DR + EK+ IR D R++ R+D R+++R + D + + R + R D ++ +R
Sbjct: 193 NRDDREQREKQEIRQDQRKELRQD--LRQEQRQDQREDRRQDQREDRRQNQREDRRQDQR 250
Query: 136 HESESYLREDQ-DRRGGDKSSTGRGDSSSHRHRER 169
E REDQ + RG D+ R D R +R
Sbjct: 251 EER----REDQREERGEDQREERREDRREDRREDR 281
Score = 115 (45.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 78 QSDRREEKRSI-RHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRH 136
+ D+RE++R R D R+ RED RR+D+R R D E + + R D + +R
Sbjct: 222 RQDQREDRRQDQREDRRQNQRED--RRQDQREERREDQREERGEDQREERREDRREDRRE 279
Query: 137 ESESYLREDQDRR 149
+ LR DQ+ R
Sbjct: 280 DRRQDLRIDQESR 292
Score = 108 (43.1 bits), Expect = 0.00049, P = 0.00049
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 78 QSDRREEKRSIR-HDHREKPREDHGRREDKRSRRHSDNNEFEARSRED---HYRRDEKRP 133
+ +RRE++R R D RE+ RED RRED+R R D + SR+D R+D ++
Sbjct: 250 REERREDQREERGEDQREERRED--RREDRREDRRQDLR-IDQESRQDLLQDLRQDLRQD 306
Query: 134 KRHESESYLREDQDR 148
R E LR+DQ R
Sbjct: 307 LRQELRQDLRQDQSR 321
>CGD|CAL0000980 [details] [associations]
symbol:orf19.4330 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0000980 EMBL:AACQ01000022 RefSeq:XP_720635.1 GeneID:3637822
KEGG:cal:CaO19.4330 eggNOG:NOG256789 Uniprot:Q5AG50
Length = 690
Score = 119 (46.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 42/174 (24%), Positives = 70/174 (40%)
Query: 4 ERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWG-KNDSSS 62
E C F G+ G+G K + G G + W ++ E S G K+D
Sbjct: 280 EEEECDEFNNGKGNAGNGGKGG----KGGKGGKGGKGGKGSWKVKRGENHSDGNKHDGQH 335
Query: 63 RAT--GSGRVA-LEGNPNQSDRREEKRSI----RHDHREKPREDHGRREDKRSRRHSDNN 115
+ + R + E + SD EK + + DH K +EDH +++ + H
Sbjct: 336 KGNKEDNHRDSDCECGYSSSDDEHEKPKVIDKKKQDHERKKQEDHDKKKQE-DHEHEKQK 394
Query: 116 EFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
E E + +EDH R EK HE E +E + + +K + + +E+
Sbjct: 395 EHERKKQEDHER--EKEDHEHEKE---KEHEKEKEHEKEKEHEKEKEHEKEKEK 443
>UNIPROTKB|Q5AG50 [details] [associations]
symbol:CaO19.4330 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0000980 EMBL:AACQ01000022 RefSeq:XP_720635.1 GeneID:3637822
KEGG:cal:CaO19.4330 eggNOG:NOG256789 Uniprot:Q5AG50
Length = 690
Score = 119 (46.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 42/174 (24%), Positives = 70/174 (40%)
Query: 4 ERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWG-KNDSSS 62
E C F G+ G+G K + G G + W ++ E S G K+D
Sbjct: 280 EEEECDEFNNGKGNAGNGGKGG----KGGKGGKGGKGGKGSWKVKRGENHSDGNKHDGQH 335
Query: 63 RAT--GSGRVA-LEGNPNQSDRREEKRSI----RHDHREKPREDHGRREDKRSRRHSDNN 115
+ + R + E + SD EK + + DH K +EDH +++ + H
Sbjct: 336 KGNKEDNHRDSDCECGYSSSDDEHEKPKVIDKKKQDHERKKQEDHDKKKQE-DHEHEKQK 394
Query: 116 EFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
E E + +EDH R EK HE E +E + + +K + + +E+
Sbjct: 395 EHERKKQEDHER--EKEDHEHEKE---KEHEKEKEHEKEKEHEKEKEHEKEKEK 443
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 117 (46.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 42/116 (36%), Positives = 54/116 (46%)
Query: 56 GKNDSSS-RATGSGRVALEGNPNQSDR-REEKRSIRHDHREKPREDHGRREDKRSRRHSD 113
GKN+ +S R SGR + ++SDR R+ RS R++ R D GR R R SD
Sbjct: 1955 GKNEQNSGRDADSGR-----DRDKSDRDRDYDRSDSRGGRDRDRNDRGRDRSDRDRDRSD 2009
Query: 114 NNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
+ RS D R D R R R D+DR DKS R S +R R+R
Sbjct: 2010 RDR--DRSDRDRDRSDRDRNDRDRD----RNDRDR-DRDKSDRDRDRSDRNRDRDR 2058
Score = 44 (20.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 24 FSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSS 62
FS+ + N GG + ++G +E S+G N S S
Sbjct: 994 FSNASNPSINGSGGGRS-FDKFGGNSYEKPSFGSNGSGS 1031
>DICTYBASE|DDB_G0282873 [details] [associations]
symbol:DDB_G0282873 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0282873 GO:GO:0000166
EMBL:AAFI02000047 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG313287
RefSeq:XP_639372.1 ProteinModelPortal:Q54RW5
EnsemblProtists:DDB0233751 GeneID:8623811 KEGG:ddi:DDB_G0282873
InParanoid:Q54RW5 OMA:RDRDDHD Uniprot:Q54RW5
Length = 952
Score = 119 (46.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 46/146 (31%), Positives = 62/146 (42%)
Query: 36 GGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRV---ALEGN-PNQ--SDRREEKRSIR 89
GGP + G G S G R S + + G+ P++ D EKR
Sbjct: 442 GGPPPPNGSGGSGSSVG-SGGSGSGGGRPYSSSKRDEWSSGGSSPDRYGGDYHGEKRKRD 500
Query: 90 HDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR-HESESYLREDQD 147
D E+ RE D R ++R R DN R R+D+ RRD R + H+S S R+ D
Sbjct: 501 DDVDERERERDRERDRERRERDDYDNRRDRDRDRDDYDRRDRDRDRDDHDSGSSRRDRDD 560
Query: 148 RRGGDKSSTGRG----DSSSHRHRER 169
G+ SS R DS S R+R
Sbjct: 561 HDSGNNSSNRRDRDDHDSGSSNRRDR 586
Score = 116 (45.9 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 57 KNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDH--GRREDKRSRRHSDN 114
++D S ++ R + N S+RR+ + R+DH G + S R D
Sbjct: 546 RDDHDSGSSRRDRDDHDSGNNSSNRRDRDDHDSGSSNRRDRDDHDSGSSSNSGSSRR-DR 604
Query: 115 NEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
++ ++ S RRD R H+S S R D+DR D SS+ R D R RER
Sbjct: 605 DDHDSNSNSSS-RRDRDRDD-HDSSSSSRRDRDRDDHDSSSSSRRDRDRDRDRER 657
Score = 113 (44.8 bits), Expect = 0.00028, P = 0.00028
Identities = 38/149 (25%), Positives = 61/149 (40%)
Query: 25 SHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREE 84
S ++ ++G +R R H+ G S + D +GS + ++ D
Sbjct: 554 SRRDRDDHDSGNNSSNRRDRDDHDS--GSS-NRRDRDDHDSGSSSNSGSSRRDRDDHDSN 610
Query: 85 KRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYR-----RDEKRPKRHESE 139
S R++ R+DH R R D+++ + SR D R RD R SE
Sbjct: 611 SNS--SSRRDRDRDDHDSSSSSRRDRDRDDHDSSSSSRRDRDRDRDRERDRDRSSDRRSE 668
Query: 140 SYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
S +++D R ++SS D S R RE
Sbjct: 669 STRDKERDDRSDNRSSRDHYDRDSTRDRE 697
Score = 112 (44.5 bits), Expect = 0.00041, P = 0.00041
Identities = 40/158 (25%), Positives = 63/158 (39%)
Query: 19 GDGCKFSHNEQRAANTGGGPQDR--SSRWGHEKFEGFSWGKNDSS-SRATGSGRVALEGN 75
G G +S +++ ++GG DR G ++ + + R R +
Sbjct: 465 GGGRPYSSSKRDEWSSGGSSPDRYGGDYHGEKRKRDDDVDERERERDRERDRERRERDDY 524
Query: 76 PNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSD--NNEFEARSREDHYRRDEKRP 133
N+ DR ++ R++ R+DH +R R D NN R R+DH R
Sbjct: 525 DNRRDRDRDRDDYDRRDRDRDRDDHDSGSSRRDRDDHDSGNNSSNRRDRDDHDSGSSNRR 584
Query: 134 KR--HESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
R H+S S RR D + +SSS R R+R
Sbjct: 585 DRDDHDSGSSSNSGSSRRDRDDHDSN-SNSSSRRDRDR 621
>WB|WBGene00013917 [details] [associations]
symbol:ZC504.3 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
GO:GO:0005524 GO:GO:0009792 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HOGENOM:HOG000233024 GeneTree:ENSGT00690000102162
EMBL:Z50029 PIR:T27620 RefSeq:NP_509746.2 ProteinModelPortal:Q23357
SMR:Q23357 STRING:Q23357 PaxDb:Q23357 EnsemblMetazoa:ZC504.3
GeneID:181247 KEGG:cel:CELE_ZC504.3 UCSC:ZC504.3 CTD:181247
WormBase:ZC504.3 InParanoid:Q23357 OMA:AGAHENI NextBio:913084
Uniprot:Q23357
Length = 668
Score = 118 (46.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 33/113 (29%), Positives = 53/113 (46%)
Query: 60 SSSRATGSGRVALEGNPNQSDRREEKRSI--RHDHREKPREDHGRREDKRSRRHSDNNEF 117
S+ GS ++ + + + D RE + SI R+ H+ K + +++ RH D
Sbjct: 2 SNYSTNGSRKIRISNSDD--DSRETRFSIQPRNSHKTKEERYRDKEKERDHERHHDRERR 59
Query: 118 EARSREDHYR--RDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
+ R R+ R RD R S +Y R++ DRR + S R D SS R R+
Sbjct: 60 DDRYRKVDSRDHRDRNRRSPAGSRTYCRDEPDRRRNNHSDRNRRDRSSERDRD 112
>UNIPROTKB|G4NEH6 [details] [associations]
symbol:MGG_00102 "Cell cycle control protein cwf19"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR011146 GO:GO:0003824
EMBL:CM001235 GO:GO:0005681 SUPFAM:SSF54197 GO:GO:0000398
InterPro:IPR006768 InterPro:IPR006767 Pfam:PF04677 Pfam:PF04676
RefSeq:XP_003719037.1 EnsemblFungi:MGG_00102T0 GeneID:2674386
KEGG:mgr:MGG_00102 Uniprot:G4NEH6
Length = 728
Score = 118 (46.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 31/94 (32%), Positives = 43/94 (45%)
Query: 77 NQSDRREEKRSIRHDHREKPREDH-GRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 135
++ +R E K RH HR D G RE RH D++ R R H R D + +R
Sbjct: 20 HEQERAERKEKRRHHHRRDRSSDRTGDRE-----RHRDHDRDSDRHRHKHRRHDSRERER 74
Query: 136 HESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
E R + R+ D++ + DSS RHR R
Sbjct: 75 DRDEHGHRHKRSRKDEDENDRDK-DSSRRRHRHR 107
>TAIR|locus:2076121 [details] [associations]
symbol:AT3G23900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016926
"protein desumoylation" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0050665 "hydrogen peroxide
biosynthetic process" evidence=RCA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR001298 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103 SMART:SM00360
SMART:SM00557 EMBL:CP002686 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 IPI:IPI00521323 RefSeq:NP_001189958.1
RefSeq:NP_189032.2 UniGene:At.37625 UniGene:At.73245
ProteinModelPortal:F4J5A7 SMR:F4J5A7 PRIDE:F4J5A7
EnsemblPlants:AT3G23900.1 EnsemblPlants:AT3G23900.3 GeneID:821973
KEGG:ath:AT3G23900 OMA:HIAYVEY Uniprot:F4J5A7
Length = 987
Score = 111 (44.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 40/144 (27%), Positives = 67/144 (46%)
Query: 26 HNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEK 85
H+ + P+ R S G E E S + DSSSR G + + G+ + R+E K
Sbjct: 586 HSSSSRRSRSVSPKKRKS--GQEDSE-LSRLRRDSSSR--GEKKSSRAGSRSPRRRKEVK 640
Query: 86 RSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLRED 145
+ R D K + RR RSR D+ + + +SR++ + +KR S S RED
Sbjct: 641 STPRDDEENKVK----RRTRSRSRSVEDSADIKDKSRDEELKHHKKR-----SRSRSRED 691
Query: 146 QDRRGGDKSSTGRGDSSSHRHRER 169
+ + + ++ D + +HR+R
Sbjct: 692 RSKT---RDTSRNSDEAKQKHRQR 712
Score = 47 (21.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 7 VCRAFQRGECTRGDGCKFSHNEQRAANT 34
VCR + G C CK +H Q T
Sbjct: 259 VCREYLNGRCVNSM-CKLNHPPQNLLMT 285
>UNIPROTKB|Q15696 [details] [associations]
symbol:ZRSR2 "U2 small nuclear ribonucleoprotein auxiliary
factor 35 kDa subunit-related protein 2" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030628 "pre-mRNA 3'-splice
site binding" evidence=IDA] [GO:0005689 "U12-type spliceosomal
complex" evidence=IDA] [GO:0000245 "spliceosomal complex assembly"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IMP]
[GO:0008380 "RNA splicing" evidence=IC] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0000245 eggNOG:NOG304335
PANTHER:PTHR12620 GO:GO:0005689 GO:GO:0030628 HOVERGEN:HBG054605
HPA:HPA047500 HOGENOM:HOG000049279 OrthoDB:EOG4CNQRM EMBL:D49677
EMBL:AC004106 EMBL:AC096510 EMBL:BC113454 EMBL:BC113480
IPI:IPI00018954 RefSeq:NP_005080.1 UniGene:Hs.171909
ProteinModelPortal:Q15696 SMR:Q15696 STRING:Q15696
PhosphoSite:Q15696 DMDM:2833266 PaxDb:Q15696 PRIDE:Q15696
DNASU:8233 Ensembl:ENST00000307771 GeneID:8233 KEGG:hsa:8233
UCSC:uc004cxg.4 CTD:8233 GeneCards:GC0XP015808 H-InvDB:HIX0017758
HGNC:HGNC:23019 MIM:300028 neXtProt:NX_Q15696 PharmGKB:PA162410930
InParanoid:Q15696 OMA:EDAFIEE PhylomeDB:Q15696 ChiTaRS:ZRSR2
GenomeRNAi:8233 NextBio:30981 ArrayExpress:Q15696 Bgee:Q15696
CleanEx:HS_ZRSR2 Genevestigator:Q15696 GermOnline:ENSG00000169249
Uniprot:Q15696
Length = 482
Score = 116 (45.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 43/167 (25%), Positives = 64/167 (38%)
Query: 2 REERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSS 61
R + +C F+ +C RG C F H R N +R ++ G S+GKN
Sbjct: 306 RWKMAICGLFEIQQCPRGKHCNFLH-VFRNPNNEFWEANRDIYLSPDR-TGSSFGKNSER 363
Query: 62 SRATGSGR---VALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFE 118
G L G N S KR+ + K G++ KR+ + + +
Sbjct: 364 RERMGHHDDYYSRLRGRRNPSPDHSYKRN--GESERKSSRHRGKKSHKRTSKSRERHNSR 421
Query: 119 ARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHR 165
+R R RD R + S S R + RR +SS+ R S R
Sbjct: 422 SRGRNRDRSRDRSRGRGSRSRSRSRSRRSRRSRSQSSS-RSRSRGRR 467
>UNIPROTKB|E1C1G5 [details] [associations]
symbol:ZC3H18 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000571 PROSITE:PS50103 GO:GO:0005634
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00650000093061
OMA:HSVDSED EMBL:AADN02067428 EMBL:AADN02067429 IPI:IPI00585449
Ensembl:ENSGALT00000009872 Uniprot:E1C1G5
Length = 955
Score = 97 (39.2 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 75 NPNQSDR-REEKRSIRHDHREKPRE---DHGRREDKRSRRHSDNNEFEARSREDHYRRDE 130
N + +R RE +R R RE+ RE + RR+ +R R + E + R++ + R+
Sbjct: 393 NYRERERERERERENRQRERERERERERERERRQRERERERERERDKERQRRKEEWERER 452
Query: 131 KRPKRHESESYLRE-DQDR-RGGDK 153
+R KR E + R+ D+DR R D+
Sbjct: 453 ERVKRDEKDRQHRDRDRDRDRDRDR 477
Score = 89 (36.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 25/85 (29%), Positives = 37/85 (43%)
Query: 86 RSIRHDHREKPREDHGR-REDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLRE 144
R+ R RE+ RE R RE +R R E R RE R+ + ++ E + RE
Sbjct: 392 RNYRERERERERERENRQRERERERERERERERRQRERERERERERDKERQRRKEEWERE 451
Query: 145 DQDRRGGDKSSTGRGDSSSHRHRER 169
++R D+ D R R+R
Sbjct: 452 -RERVKRDEKDRQHRDRDRDRDRDR 475
Score = 66 (28.3 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 5 RGVCRAFQRGECTRGDGCKFSH 26
R CR F +G CT G C+F H
Sbjct: 214 RPTCRFFMKGHCTWGMNCRFIH 235
>UNIPROTKB|E1BXC5 [details] [associations]
symbol:ZC3H13 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00700000104144 OMA:RSNRSHT
EMBL:AADN02005441 EMBL:AADN02005442 EMBL:AADN02005443
IPI:IPI00572738 Ensembl:ENSGALT00000027439 Uniprot:E1BXC5
Length = 1588
Score = 119 (46.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 47/180 (26%), Positives = 76/180 (42%)
Query: 3 EERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWG--HEKFEGFSW----G 56
+ R R+ + G +RG G + S R T G D S G H+ +E S
Sbjct: 553 DSRNESRSDRTGR-SRGRGPELSDKGSRG--TRGSQVDGHSSSGNYHDSWESRSSYPDRD 609
Query: 57 KNDSSSRATGSGRVALEGNPNQSDRRE-EKRS---IRHDHREKPREDHGRREDKRSRRHS 112
+ DS +A S G ++ D RE ++R+ +RH R E RR+++R R
Sbjct: 610 RYDSRDQARDSSFERRHGERDRRDNRERDQRASSPVRHQGRSDDLERDERRDERRVDRSD 669
Query: 113 DNNEFEARSREDHYRRDEKRPKRHESESYLREDQDR---RGGDKSSTGRGDSSSHRHRER 169
D + AR RE RD +R + + E ++++ R ++ D R R+R
Sbjct: 670 DRRDERARERERERERDRERERERDREREREKERELERDRARERERERERDKDRDRERDR 729
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 42/158 (26%), Positives = 62/158 (39%)
Query: 13 RGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVAL 72
R E TR D S NE R+ TG + R + G + D S ++G+ +
Sbjct: 543 RAE-TRNDSRSDSRNESRSDRTGRS-RGRGPELSDKGSRGTRGSQVDGHS-SSGNYHDSW 599
Query: 73 EGNPNQSDR-REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEK 131
E + DR R + R D + R R D R R ++ + R D RDE+
Sbjct: 600 ESRSSYPDRDRYDSRDQARDSSFERRHGERDRRDNRERDQRASSPVRHQGRSDDLERDER 659
Query: 132 RPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
R +R S R D+ R ++ + R RER
Sbjct: 660 RDERRVDRSDDRRDERARERERERERDRERERERDRER 697
Score = 111 (44.1 bits), Expect = 0.00099, P = 0.00099
Identities = 42/165 (25%), Positives = 74/165 (44%)
Query: 12 QRGECTRGDGCKFSHN---EQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSG 68
++G R D SH+ ++R G ++R +R + + S ++ R + G
Sbjct: 400 EKGRHDR-DRTSQSHDRRHDRRDETRGKREKERETRDDRDYDQEQSTSRDHRDDRESRDG 458
Query: 69 RVALEGNPNQSDRRE--EKRSIR--HDHREKPREDHGRREDKRSRRHSDNNEFEARSRED 124
R + N+ DRRE E R R D R+ R++ R+ + SR D++++ R D
Sbjct: 459 RDRRDTRDNR-DRRETRESRDTRDSRDTRDYSRDNKDSRDQRDSRSTRDSHDYRDRESRD 517
Query: 125 HYRRDEK--RPKRHESESYLREDQDRRG--GDKSSTGRGDSSSHR 165
+++D++ R S+ RE+ R D S R +S S R
Sbjct: 518 AHKKDDQYQEDSRSYGRSHGREESSRAETRNDSRSDSRNESRSDR 562
>UNIPROTKB|K7GKM6 [details] [associations]
symbol:RPTN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001751 InterPro:IPR002048 InterPro:IPR011992
PROSITE:PS00303 PROSITE:PS50222 Prosite:PS00018 Gene3D:1.10.238.10
InterPro:IPR018247 InterPro:IPR013787 Pfam:PF01023
GeneTree:ENSGT00530000063634 EMBL:CU633752
Ensembl:ENSSSCT00000034040 Uniprot:K7GKM6
Length = 662
Score = 116 (45.9 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 34/161 (21%), Positives = 73/161 (45%)
Query: 17 TRGDGCKFSHNEQRAANTGGGPQDR---SSRWGH--EKFEGFSWGKNDSSSRATGSGRVA 71
T+G G + ++++ ++ G DR SS +G + +G +G+ D +++ G+
Sbjct: 460 TQGQGSHYGQIDRQSQSSHYGQTDRQGQSSHYGQTDRQGQGSHYGQTDRQGQSSHYGQTD 519
Query: 72 LEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARS-REDHYRRDE 130
+G + + E + RH ++ ED R+ + + H ++ + R R+ H D+
Sbjct: 520 RQGQGSHYGQTERQEQTRHRRDKQTHEDEQTRQRRDKQTHEEDQNCQQRQDRQTH--EDK 577
Query: 131 KRPKRHESESYLREDQDRRGGDK---SSTGRGDSSSHRHRE 168
+R + + + R Q R +K + G+ S RH +
Sbjct: 578 ERYQGSQDQQSHRTQQGRANREKFHMNEEGQSRGSQGRHSD 618
Score = 113 (44.8 bits), Expect = 0.00018, P = 0.00018
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 12 QRGECTR-GDGCKFSHNEQRAANTGGGPQDR---SSRWGHE--KFEGFSWGKNDSSSRAT 65
Q G+ R G G + ++++ + G DR SS +GH + +G +G+ D S+++
Sbjct: 418 QYGQTERQGQGSHYGQIDRQSQGSHYGQTDRQGQSSHYGHTDTQGQGSHYGQIDRQSQSS 477
Query: 66 GSGRVALEGNPN---QSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSR 122
G+ +G + Q+DR+ + R+ +G+ + + H E R
Sbjct: 478 HYGQTDRQGQSSHYGQTDRQGQGSHYGQTDRQGQSSHYGQTDRQGQGSHYGQTE---RQE 534
Query: 123 EDHYRRDEKRPKRHESE-SYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
+ +RRD++ HE E + R D+ D++ R D +H +ER
Sbjct: 535 QTRHRRDKQT---HEDEQTRQRRDKQTHEEDQNCQQRQDRQTHEDKER 579
>UNIPROTKB|G5E5I0 [details] [associations]
symbol:RBMX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00600000084414 OMA:HRHKRAR EMBL:DAAA02067479
Ensembl:ENSBTAT00000019649 Uniprot:G5E5I0
Length = 338
Score = 113 (44.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 30/101 (29%), Positives = 45/101 (44%)
Query: 69 RVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSRE-DHYR 127
R + +P+ + R RS D +PR++ + E K S R + E R RE D R
Sbjct: 223 REVRKSHPSSPEVRMTCRSGTEDQEREPRKEKSKHEHKSSSRREER---EDRHRERDRGR 279
Query: 128 RDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
+ +RH+ S R D+ G S R SHRH++
Sbjct: 280 SSDIHSRRHDRRSEGRHDRGSEGRSHRSRSRSRDKSHRHKK 320
>ZFIN|ZDB-GENE-030131-6117 [details] [associations]
symbol:dido1 "death inducer-obliterator 1"
species:7955 "Danio rerio" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003618 InterPro:IPR017890 InterPro:IPR019787
Pfam:PF00628 Pfam:PF07500 PROSITE:PS50016 PROSITE:PS51321
SMART:SM00249 SMART:SM00510 ZFIN:ZDB-GENE-030131-6117 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.472.30
InterPro:IPR012921 Pfam:PF07744 SUPFAM:SSF46942
GeneTree:ENSGT00530000063844 EMBL:BX296530 EMBL:BX005175
IPI:IPI00971682 Ensembl:ENSDART00000110882 ArrayExpress:F1QQA3
Bgee:F1QQA3 Uniprot:F1QQA3
Length = 2779
Score = 120 (47.3 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 52/173 (30%), Positives = 76/173 (43%)
Query: 12 QRGECTRGDGCKFSHNEQRAANTGGGPQDRS--SRWGHEKFEGFSWGKNDSSSRATGSGR 69
+R C+ DG + SH R + GGP+DR SR E+ S + R G G
Sbjct: 2417 RRRSCSSRDGSE-SHT--RPSRFEGGPRDRDAPSRLSEERQREMSEDRRRDRDREGGHGG 2473
Query: 70 VALEGN-PNQSDR-----REEKRSIRHD----H-REKPREDHGRREDKRSRRHSDNNEFE 118
+ N ++ DR RE RS D H REK RE H + D+ R SD +
Sbjct: 2474 RSWAWNREHEYDRSKERDRERDRSRERDREQGHSREKERE-HSKERDRSRGRESDRGKES 2532
Query: 119 ARSREDHYRRDEKRPKRHE--SESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
R +E ++ +R K E ES ++ DR G +S G+ +S + +R
Sbjct: 2533 DRGKESERGKESERGKESERGKESERGKEFDR--GKESDRGK-ESDRGKESDR 2582
Score = 113 (44.8 bits), Expect = 0.00092, P = 0.00092
Identities = 46/170 (27%), Positives = 65/170 (38%)
Query: 4 ERGVCRAFQRG-ECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSS 62
ERG + +RG E RG R + G + S R G E G + S
Sbjct: 2587 ERG--KESERGKESDRGKESDRGKESDRGKESDRGKE--SDR-GKESDRGKESDRGKESD 2641
Query: 63 RATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRS--RRHSDNNEFEAR 120
R S R +SD+ + R R++ RE RED++ R + N E E
Sbjct: 2642 RGKESDRGKESDRGKESDKYGDGDKRRDRDRDRERERGREREDRKDHDRDRAKNREREKD 2701
Query: 121 SREDHYRRDEKRPKRHESESYLREDQDRRGGDKS-STGRGDSSSHRHRER 169
D RD +R + E +D+DRR D+ RG R+R
Sbjct: 2702 RDRDRDSRDRRRERSRSRERDRGKDRDRRDRDRERDKDRGKEKERDRRDR 2751
>FB|FBgn0004924 [details] [associations]
symbol:Top1 "Topoisomerase 1" species:7227 "Drosophila
melanogaster" [GO:0006265 "DNA topological change" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003917 "DNA topoisomerase
type I activity" evidence=ISS;NAS;IDA] [GO:0005703 "polytene
chromosome puff" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0003916 "DNA topoisomerase activity" evidence=IDA] [GO:0005665
"DNA-directed RNA polymerase II, core complex" evidence=IDA]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0002168
"instar larval development" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009790 "embryo development"
evidence=IMP] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0006468 "protein
phosphorylation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0004672 "protein kinase activity" evidence=IDA]
[GO:0031298 "replication fork protection complex" evidence=IBA]
[GO:0006338 "chromatin remodeling" evidence=IBA] [GO:0006260 "DNA
replication" evidence=IBA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR009054 InterPro:IPR011010 InterPro:IPR013030
InterPro:IPR013034 InterPro:IPR013499 InterPro:IPR013500
InterPro:IPR014711 InterPro:IPR014727 InterPro:IPR018521
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 PROSITE:PS00176
SMART:SM00435 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0007059 GO:GO:0005730 GO:GO:0008283 GO:GO:0006260
EMBL:AE014298 GO:GO:0048477 GO:GO:0006338 GO:GO:0009790
GO:GO:0004672 GO:GO:0005719 GO:GO:0030261 GO:GO:0002168
GO:GO:0005703 GO:GO:0031298 GO:GO:0006265 SUPFAM:SSF56349
GO:GO:0003918 eggNOG:COG3569 KO:K03163 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 CTD:7150 EMBL:M74557 EMBL:U80064 PIR:S35521
RefSeq:NP_001014742.1 RefSeq:NP_511161.2 UniGene:Dm.2912
ProteinModelPortal:P30189 SMR:P30189 IntAct:P30189 MINT:MINT-748832
STRING:P30189 PaxDb:P30189 PRIDE:P30189 GeneID:32458
KEGG:dme:Dmel_CG6146 FlyBase:FBgn0004924 InParanoid:P30189
OrthoDB:EOG4MCVFF ChiTaRS:TOP1 GenomeRNAi:32458 NextBio:778562
Bgee:P30189 GermOnline:CG6146 Uniprot:P30189
Length = 972
Score = 117 (46.2 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 44/166 (26%), Positives = 68/166 (40%)
Query: 6 GVCRAFQ-RGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRA 64
G C Q G T G G H+ ++++ SS+ H E + SS +
Sbjct: 17 GSCEVVQSNGVTTNGHG---HHHHHHSSSSSSSKHKSSSKDKHRDRE-----REHKSSNS 68
Query: 65 TGSGRVALEGNPNQSDR-REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSRE 123
+ S + E + D+ R + S HR+K +E G RS S + + + S
Sbjct: 69 SSSSK---EHKSSSRDKDRHKSSSSSSKHRDKDKERDGSSNSHRSGSSSSHKDKDGSSSS 125
Query: 124 DHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
H + KR S+ R D+D+ G SS+ SSS R +ER
Sbjct: 126 KH-KSSSGHHKR-SSKDKERRDKDKDRGSSSSSRHKSSSSSRDKER 169
>RGD|1309863 [details] [associations]
symbol:Nsrp1 "nuclear speckle splicing regulatory protein 1"
species:10116 "Rattus norvegicus" [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IEA;ISO;ISS]
[GO:0003729 "mRNA binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA;ISO;ISS] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA;ISO;ISS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA;ISO;ISS] [GO:0032502
"developmental process" evidence=IEA;ISO;ISS] RGD:1309863
GO:GO:0008380 GO:GO:0016607 GO:GO:0003729 GO:GO:0006397
GO:GO:0006913 GO:GO:0030529 GO:GO:0032502 GO:GO:0000381
GeneTree:ENSGT00700000104144 CTD:84081 eggNOG:NOG310283
HOVERGEN:HBG081043 KO:K13206 OrthoDB:EOG43XV3P InterPro:IPR018612
Pfam:PF09745 OMA:NDKYRDR EMBL:BC099120 IPI:IPI00370368
RefSeq:NP_001032266.1 UniGene:Rn.145937 PhosphoSite:Q4FZU3
PRIDE:Q4FZU3 Ensembl:ENSRNOT00000030749 GeneID:303346
KEGG:rno:303346 InParanoid:Q4FZU3 NextBio:651186
ArrayExpress:Q4FZU3 Genevestigator:Q4FZU3
GermOnline:ENSRNOG00000022502 Uniprot:Q4FZU3
Length = 547
Score = 115 (45.5 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 43/162 (26%), Positives = 68/162 (41%)
Query: 25 SHNEQRAANTGGGPQ----DRSSRW-GHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQS 79
+H R+++ GG RSS+ GHE G + + R E +
Sbjct: 283 NHTHSRSSSEEGGLSTKYHSRSSQSRGHEHKGGQHQDRQSRDQESCHKDRSHREEKSSHR 342
Query: 80 DRREEKRSI---RHDHREKPR-EDHGRREDKRSRRHSDNNEFEARSRE--DHYRRDEKRP 133
R + RH+H +KP+ G R+D+ +R ++ + + R+ DH R EK
Sbjct: 343 HREASHKDHHWKRHEHEDKPKGRGQGERQDREWKREKYSSREQEKDRQWNDHDRYSEKEK 402
Query: 134 KRHESESYLREDQDR-RGGDK-----SSTGRGDSSSHRHRER 169
K E E + + ++R G K G G SS RHR+R
Sbjct: 403 KGKEKEEHRKARRERCEDGAKYRERKKPEGSGQSSE-RHRDR 443
>FB|FBgn0031883 [details] [associations]
symbol:CG11266 species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014134
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000381 HSSP:Q60900
TIGRFAMs:TIGR01622 KO:K13091 OMA:AGWDTEI
GeneTree:ENSGT00690000102089 UniGene:Dm.7322 GeneID:33989
KEGG:dme:Dmel_CG11266 FlyBase:FBgn0031883 ChiTaRS:CG11266
GenomeRNAi:33989 NextBio:786302 EMBL:AY051860 RefSeq:NP_609095.1
RefSeq:NP_723243.1 SMR:Q9VM49 IntAct:Q9VM49 MINT:MINT-745605
STRING:Q9VM49 EnsemblMetazoa:FBtr0089636 EnsemblMetazoa:FBtr0089640
UCSC:CG11266-RA InParanoid:Q9VM49 Uniprot:Q9VM49
Length = 594
Score = 115 (45.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 44/144 (30%), Positives = 56/144 (38%)
Query: 35 GGGPQDRSSRWGHEKFEG--FSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDH 92
GGG D + G G S K SR+ R +G ++ DR E+ S R
Sbjct: 40 GGGHDDDYAENGPRNGSGGGSSHKKQSKRSRSRSGSR---DGK-SRRDRGNERSSHRDKD 95
Query: 93 REKPREDHGRREDKRSRRHSDNNEFEARSRE-DHYRRDEKRPKRHESESYL-----REDQ 146
+E+ R G D+ R D + R RE D RR R +R Y R +
Sbjct: 96 KERDRNRDGGDRDRHRREGGDRDRERERERERDRSRRSRSRDERGGGGRYGDRDKDRRSR 155
Query: 147 DRRGGDKS-STGRGDSSSHRHRER 169
DRRGG KS R R R R
Sbjct: 156 DRRGGSKSLQVDRSRDKRRRSRSR 179
>ZFIN|ZDB-GENE-040426-1146 [details] [associations]
symbol:traf3ip1 "TNF receptor-associated factor 3
interacting protein 1" species:7955 "Danio rerio" [GO:0008017
"microtubule binding" evidence=IEA] [GO:0048793 "pronephros
development" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IGI;ISS;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] InterPro:IPR018799 ZFIN:ZDB-GENE-040426-1146
GO:GO:0005737 GO:GO:0005856 GO:GO:0042384 GO:GO:0048793
EMBL:BC056776 IPI:IPI00509049 RefSeq:NP_956894.1 UniGene:Dr.18537
ProteinModelPortal:Q6PGZ3 SMR:Q6PGZ3 STRING:Q6PGZ3 GeneID:393572
KEGG:dre:393572 CTD:26146 eggNOG:NOG304934 HOGENOM:HOG000007159
HOVERGEN:HBG101388 InParanoid:Q6PGZ3 OrthoDB:EOG40S0GB
NextBio:20814593 PANTHER:PTHR31363 Uniprot:Q6PGZ3
Length = 629
Score = 115 (45.5 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 28 EQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRS 87
+Q+ + QD+ +R G E K S +GS + +P+Q +E KR
Sbjct: 135 DQKGKPSTSRSQDKENREGREHHRDREERKGIKES--SGSRE---QKDPDQPKDQESKRD 189
Query: 88 IRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQD 147
+ R+ R D GR ++ R D ++ +R RE +D+ R K E E +++
Sbjct: 190 DKDRRRDAERSDKGRERERTKDRDRDKDK--SRDRE----KDKTREKEREREKDRNREKE 243
Query: 148 RRGGDKSSTGRGDSSSHRHRER 169
R DK + + SH+ RER
Sbjct: 244 RER-DKDRDKKKERESHKDRER 264
>DICTYBASE|DDB_G0274361 [details] [associations]
symbol:prpf38a "putative U4/U6.U5 small nuclear
ribonucleoparticle-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] dictyBase:DDB_G0274361
Pfam:PF03371 GenomeReviews:CM000151_GR EMBL:AAFI02000012
eggNOG:NOG241318 KO:K12849 InterPro:IPR005037 InterPro:IPR024767
PANTHER:PTHR23142 Pfam:PF12871 RefSeq:XP_643885.1
EnsemblProtists:DDB0233545 GeneID:8619311 KEGG:ddi:DDB_G0274361
InParanoid:Q86IV3 OMA:PYWKEKC ProtClustDB:CLSZ2515186
Uniprot:Q86IV3
Length = 515
Score = 114 (45.2 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 58 NDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEF 117
+ SSS T + +E N N++++ +EK H+EK +E+ E+KR + DN +
Sbjct: 252 SSSSSITTTTTTTTIE-NENENEKHKEK------HKEKHKENENENENKRYKE-KDNKDG 303
Query: 118 EARSREDHYR-RDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
E D + RD R + ++Y +D DR D+S+ DS+ R R+R
Sbjct: 304 EKERYIDRDKYRDRDRDSYRDRDNYKYDDNDR---DRSTKYHKDSNRDRDRDR 353
>MGI|MGI:2144305 [details] [associations]
symbol:Ccdc55 "coiled-coil domain containing 55"
species:10090 "Mus musculus" [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607
"nuclear speck" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0032502 "developmental process"
evidence=ISO] MGI:MGI:2144305 GO:GO:0008380 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 GO:GO:0006913 GO:GO:0030529
EMBL:AL603842 GO:GO:0032502 GO:GO:0000381
GeneTree:ENSGT00700000104144 eggNOG:NOG310283 HOVERGEN:HBG081043
KO:K13206 OrthoDB:EOG43XV3P InterPro:IPR018612 Pfam:PF09745
OMA:NDKYRDR EMBL:AK168573 EMBL:BC089560 IPI:IPI00345960
RefSeq:NP_001012309.1 UniGene:Mm.156195 PhosphoSite:Q5NCR9
PRIDE:Q5NCR9 Ensembl:ENSMUST00000102494 GeneID:237859
KEGG:mmu:237859 UCSC:uc007kgg.1 CTD:237859 InParanoid:Q5NCR9
NextBio:383528 Bgee:Q5NCR9 CleanEx:MM_CCDC55 Genevestigator:Q5NCR9
GermOnline:ENSMUSG00000037958 Uniprot:Q5NCR9
Length = 542
Score = 114 (45.2 bits), Expect = 0.00010, P = 0.00010
Identities = 49/168 (29%), Positives = 70/168 (41%)
Query: 9 RAFQRGECT-RGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGS 67
RA R RG G K H+ + + + G QDR SR + S K+ S S
Sbjct: 285 RAHSRSSSEERGLGTK--HHSRGSQSRGHEHQDRQSR------DQESCHKDRSHREEKSS 336
Query: 68 GRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYR 127
R + + ++ E+ ++ R+D RE KR + S E + R R DH R
Sbjct: 337 HRHREASHKDHYWKKHEQEDKLKGREQEERQD---REGKREKYSSREQERD-RQRNDHDR 392
Query: 128 RDEKRPKRHESESYLR------EDQDRRGGDKSSTGRGDSSSHRHRER 169
EK KR E E + + ED + + G G SS RHR+R
Sbjct: 393 YSEKEKKRKEKEEHTKARRERCEDSGKHREREKPEGHGQSSE-RHRDR 439
>DICTYBASE|DDB_G0268004 [details] [associations]
symbol:snrp70 "U1 small nuclear ribonucleoprotein 70
kDa protein" species:44689 "Dictyostelium discoideum" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS] [GO:0005685
"U1 snRNP" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0268004 GenomeReviews:CM000150_GR
GO:GO:0000166 Gene3D:3.30.70.330 EMBL:AAFI02000003 GO:GO:0005681
GO:GO:0003723 GO:GO:0043484 GO:GO:0000398 eggNOG:COG0724
HSSP:Q14103 GO:GO:0005685 KO:K11093 InterPro:IPR022023 Pfam:PF12220
RefSeq:XP_647483.1 ProteinModelPortal:Q55FQ0 STRING:Q55FQ0
EnsemblProtists:DDB0233134 GeneID:8616290 KEGG:ddi:DDB_G0268004
OMA:YLMEPAP Uniprot:Q55FQ0
Length = 459
Score = 113 (44.8 bits), Expect = 0.00011, P = 0.00011
Identities = 44/152 (28%), Positives = 60/152 (39%)
Query: 19 GDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQ 78
G G R G DRS R ++ G + D R +G R E +Q
Sbjct: 256 GSGGSGGDRGDRGDRDRGDRGDRSDRSDRDRERG----RGDRDHRGSGGER---ERERDQ 308
Query: 79 SDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHES 138
DR ++ R D ++ R D G R D RS R D+ E R D R D + +
Sbjct: 309 RDRGGDRGGDRGDRSDRGRSDRGDRGD-RSDRGRDDRERGRDDRGDRGRDDRRGGSDRDR 367
Query: 139 ESYLREDQDRRGGDKSSTGRGD---SSSHRHR 167
+ R+D+ R D+S GR D S HR
Sbjct: 368 DRGSRDDRGDRD-DRSDRGRDDRRGGSDRDHR 398
>UNIPROTKB|I3LF64 [details] [associations]
symbol:ZRSR2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
PANTHER:PTHR12620 GeneTree:ENSGT00530000063193 OMA:EDAFIEE
EMBL:FP102132 Ensembl:ENSSSCT00000028847 Uniprot:I3LF64
Length = 479
Score = 113 (44.8 bits), Expect = 0.00011, P = 0.00011
Identities = 46/168 (27%), Positives = 62/168 (36%)
Query: 2 REERGVCRAFQRGECTRGDGCKFSH------NEQRAANTGG--GPQDRSSRWGHEKFEGF 53
R + +C F+ +C RG C F H NE AN P S +G
Sbjct: 313 RWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSPDRTGSSFGKNSERRE 372
Query: 54 SWGKNDSSS----RATGSGRVALEGNPNQSDRREEKRSIR-HDHREKPREDHGRREDKRS 108
G+++ S R+ G R + RR + + H HR K RE H R R
Sbjct: 373 RPGRHEYSRLRRRRSPGPARSYKRNGEAERKRRGSHGAKKSHKHRSKSRERHSSRSRGRK 432
Query: 109 RRHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSST 156
R S +RSR R + R +S S R RR G + T
Sbjct: 433 RDRSRGRGSRSRSRSRRSRSHSR--SRSQSSSRSRSRGGRRSGSRDRT 478
>UNIPROTKB|Q06A99 [details] [associations]
symbol:SRSF4 "SFRS4" species:9823 "Sus scrofa" [GO:0048025
"negative regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0048025
eggNOG:COG0724 HOVERGEN:HBG002295 GeneTree:ENSGT00700000104103
HOGENOM:HOG000276234 KO:K12893 CTD:6429 OMA:REHAKSE
OrthoDB:EOG41C6X9 EMBL:FP236541 EMBL:DQ972965 RefSeq:NP_001070684.1
UniGene:Ssc.11128 Ensembl:ENSSSCT00000003983 GeneID:768101
KEGG:ssc:768101 Uniprot:Q06A99
Length = 491
Score = 113 (44.8 bits), Expect = 0.00012, P = 0.00012
Identities = 38/146 (26%), Positives = 65/146 (44%)
Query: 27 NEQRAANTGGGPQDRS-SRWGHEKFEGFSWGKNDSS-SRATGSGRVALEGNPNQSDRREE 84
+ +R + + RS SR H + G + SS S++ R G+ ++S R
Sbjct: 179 SRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSR---SGSRSRSKSRSR 235
Query: 85 KRSIRHDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLR 143
+S +EK R H R DKR + D E + ++ ++ + + P RH+S+S R
Sbjct: 236 SQSRSRSKKEKSRSRSHSRSADKRRSKSKDQAEEKVQNSDNTGKSKSRSPSRHKSKSKSR 295
Query: 144 EDQDRRGGDKSSTGRGDSSSHRHRER 169
RG ++ RG S R +E+
Sbjct: 296 SRSQERGVEEK---RGSGSRSRSKEK 318
>UNIPROTKB|G4MRF7 [details] [associations]
symbol:MGG_02411 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CM001231
RefSeq:XP_003709196.1 EnsemblFungi:MGG_02411T0 GeneID:2681508
KEGG:mgr:MGG_02411 Uniprot:G4MRF7
Length = 396
Score = 112 (44.5 bits), Expect = 0.00012, P = 0.00012
Identities = 38/118 (32%), Positives = 53/118 (44%)
Query: 62 SRATGSGRVALEGNPNQSDRREEKRS-IRHDHRE---KPREDHGRREDKRS---RRHSDN 114
S A + V E + DR ++ IR + R K R++ GRRE + S RR D+
Sbjct: 263 SGAKRAREVDKERRREREDREKDVDDLIREERRRAKRKRRDEEGRREHRHSGENRRRGDD 322
Query: 115 NEFEARS---REDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
+E R R+D +RR +R H + RE DRR D+S R S R R
Sbjct: 323 DEKRERRHRHRDDEHRRSYRREDGHRERKH-REGDDRRRRDRSKERRRSRSPRRSPRR 379
>UNIPROTKB|B4DH15 [details] [associations]
symbol:DDX23 "cDNA FLJ54028, highly similar to Probable
ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA]
GO:GO:0004386 UniGene:Hs.130098 HGNC:HGNC:17347 EMBL:AC117498
EMBL:AK294877 IPI:IPI01021148 STRING:B4DH15 Ensembl:ENST00000547135
Uniprot:B4DH15
Length = 108
Score = 93 (37.8 bits), Expect = 0.00013, P = 0.00013
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 67 SGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRR----EDKRSRRHSDNNEFEARSR 122
+G +A + + + S +EE++ R RE+ R D R+ +D++ R D +RSR
Sbjct: 2 AGELADKKDRDASPSKEERKRSRTPDRERDR-DRDRKSSPSKDRKRHRSRDRRRGGSRSR 60
Query: 123 EDHYRRDEKRPKRH-ESESYLREDQDRRGGDKSSTG-RGDSSSHRHR 167
+ +R +RH E E D++++ D+ G R D R R
Sbjct: 61 SRSRSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSR 107
>WB|WBGene00002957 [details] [associations]
symbol:let-858 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007281
"germ cell development" evidence=IMP] [GO:0007369 "gastrulation"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0042078 "germ-line stem cell division" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
GO:GO:0009792 GO:GO:0040007 GO:GO:0005654 SUPFAM:SSF48371
GO:GO:0002119 GO:GO:0008380 GO:GO:0003677 GO:GO:0018996
GO:GO:0006397 GO:GO:0005681 GO:GO:0003723 GO:GO:0000790
GO:GO:0007369 Gene3D:1.25.40.180 GO:GO:0042078 EMBL:U19615
EMBL:Z81525 PIR:T21688 RefSeq:NP_496363.1 UniGene:Cel.5489
ProteinModelPortal:Q17336 DIP:DIP-26173N IntAct:Q17336
MINT:MINT-1105983 STRING:Q17336 PaxDb:Q17336
EnsemblMetazoa:F33A8.1.1 EnsemblMetazoa:F33A8.1.2 GeneID:174689
KEGG:cel:CELE_F33A8.1 UCSC:F33A8.1.1 CTD:174689 WormBase:F33A8.1
eggNOG:NOG293831 GeneTree:ENSGT00650000093379 HOGENOM:HOG000212368
InParanoid:Q17336 KO:K13100 OMA:SENFRRK NextBio:885078
GO:GO:0043073 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 Uniprot:Q17336
Length = 897
Score = 115 (45.5 bits), Expect = 0.00014, P = 0.00014
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 58 NDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRRE--DKRSRRHSDNN 115
+D SS ++ + E P ++++K S ++K +E+ GRR+ DKR+ RH D +
Sbjct: 715 SDDSSDSSSDSSSSSESEPEPPKKKKKKNS-EESSKKKEKENIGRRDRGDKRAERHRDQS 773
Query: 116 -EFEARSREDHYRRDE-KRPKRHESESYLREDQDRRGGD----KSSTGRGDSSSHRHRER 169
E + + R DE +RP+R + +D+ R+ D K R DS R +R
Sbjct: 774 VENKDKDRRRRQDSDENRRPERGDDRKDRSKDRRRQDSDDEDRKGRERREDSGERRRGDR 833
>UNIPROTKB|Q17336 [details] [associations]
symbol:let-858 "Pre-mRNA-splicing factor CWC22 homolog"
species:6239 "Caenorhabditis elegans" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
Pfam:PF02854 SMART:SM00543 GO:GO:0009792 GO:GO:0040007
GO:GO:0005654 SUPFAM:SSF48371 GO:GO:0002119 GO:GO:0008380
GO:GO:0003677 GO:GO:0018996 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0000790 GO:GO:0007369 Gene3D:1.25.40.180
GO:GO:0042078 EMBL:U19615 EMBL:Z81525 PIR:T21688 RefSeq:NP_496363.1
UniGene:Cel.5489 ProteinModelPortal:Q17336 DIP:DIP-26173N
IntAct:Q17336 MINT:MINT-1105983 STRING:Q17336 PaxDb:Q17336
EnsemblMetazoa:F33A8.1.1 EnsemblMetazoa:F33A8.1.2 GeneID:174689
KEGG:cel:CELE_F33A8.1 UCSC:F33A8.1.1 CTD:174689 WormBase:F33A8.1
eggNOG:NOG293831 GeneTree:ENSGT00650000093379 HOGENOM:HOG000212368
InParanoid:Q17336 KO:K13100 OMA:SENFRRK NextBio:885078
GO:GO:0043073 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 Uniprot:Q17336
Length = 897
Score = 115 (45.5 bits), Expect = 0.00014, P = 0.00014
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 58 NDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRRE--DKRSRRHSDNN 115
+D SS ++ + E P ++++K S ++K +E+ GRR+ DKR+ RH D +
Sbjct: 715 SDDSSDSSSDSSSSSESEPEPPKKKKKKNS-EESSKKKEKENIGRRDRGDKRAERHRDQS 773
Query: 116 -EFEARSREDHYRRDE-KRPKRHESESYLREDQDRRGGD----KSSTGRGDSSSHRHRER 169
E + + R DE +RP+R + +D+ R+ D K R DS R +R
Sbjct: 774 VENKDKDRRRRQDSDENRRPERGDDRKDRSKDRRRQDSDDEDRKGRERREDSGERRRGDR 833
>UNIPROTKB|Q9H0G5 [details] [associations]
symbol:NSRP1 "Nuclear speckle splicing regulatory protein
1" species:9606 "Homo sapiens" [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IDA] [GO:0016607 "nuclear
speck" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0032502
"developmental process" evidence=IMP] GO:GO:0008380 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 GO:GO:0006913 GO:GO:0030529
GO:GO:0032502 GO:GO:0000381 EMBL:AC104984 CTD:84081
eggNOG:NOG310283 HOVERGEN:HBG081043 KO:K13206 OrthoDB:EOG43XV3P
InterPro:IPR018612 Pfam:PF09745 EMBL:AL136806 EMBL:CR533555
EMBL:BC040118 EMBL:BC105044 EMBL:BC105046 IPI:IPI00030274
RefSeq:NP_001248396.1 RefSeq:NP_115517.1 UniGene:Hs.462663
ProteinModelPortal:Q9H0G5 PhosphoSite:Q9H0G5 DMDM:74733524
PaxDb:Q9H0G5 PRIDE:Q9H0G5 DNASU:84081 Ensembl:ENST00000247026
GeneID:84081 KEGG:hsa:84081 UCSC:uc002heu.3 GeneCards:GC17P028445
HGNC:HGNC:25305 HPA:HPA015593 HPA:HPA015603 neXtProt:NX_Q9H0G5
PharmGKB:PA142672171 OMA:NDKYRDR PhylomeDB:Q9H0G5 GenomeRNAi:84081
NextBio:73307 ArrayExpress:Q9H0G5 Bgee:Q9H0G5 CleanEx:HS_CCDC55
Genevestigator:Q9H0G5 Uniprot:Q9H0G5
Length = 558
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 48/170 (28%), Positives = 77/170 (45%)
Query: 3 EERG-VCRAFQRGECT-RG-DGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKND 59
EERG R +G T RG + + H ++++ + DR R K E S +
Sbjct: 294 EERGHSTRHHTKGSRTSRGHEKREDQHQQKQSRDQENHYTDRDYR----K-ERDSHRHRE 348
Query: 60 SSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEA 119
+S R + R E P D+RE RS R REK RE + +RE +R R+ +D N
Sbjct: 349 ASHRDSHWKRHEQEDKPRARDQRE--RSDRVWKREKDREKYSQREQERDRQQNDQNRPSE 406
Query: 120 RSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
+ ++ + ++ + E Y D+ R D+ G SS R+++R
Sbjct: 407 KGEKEEKSKAKEEHMKVRKERYENNDKYR---DREKREVGVQSSERNQDR 453
>UNIPROTKB|J9NS11 [details] [associations]
symbol:ZC3H18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00650000093061 EMBL:AAEX03003971 EMBL:AAEX03003972
Ensembl:ENSCAFT00000050086 Uniprot:J9NS11
Length = 947
Score = 93 (37.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 90 HDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHE--SESYLREDQ 146
H++RE+ RE + R+ +R R + E E R RE R+ +R K + E + RE
Sbjct: 393 HNYRERERERERENRQRERERERERDRERERRQRERERERERERDKERQRRKEEWERERA 452
Query: 147 DRRGGDKSSTGRGDSSSHRHRER 169
R D+ R D R +E+
Sbjct: 453 KRDDKDRQHRDR-DREKEREKEK 474
Score = 91 (37.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 82 REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHES--- 138
RE +R ++R++ RE R+ +R RR + R RE RD++R +R E
Sbjct: 396 RERERERERENRQRERERERERDRERERRQRE------RERERERERDKERQRRKEEWER 449
Query: 139 ESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
E R+D+DR+ D+ + + + R
Sbjct: 450 ERAKRDDKDRQHRDRDREKEREKEKEKPKPR 480
Score = 66 (28.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 5 RGVCRAFQRGECTRGDGCKFSH 26
R CR F +G CT G C+F H
Sbjct: 215 RPTCRFFMKGNCTWGMNCRFIH 236
>UNIPROTKB|F1ST35 [details] [associations]
symbol:RPTN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001751 InterPro:IPR002048 InterPro:IPR011992
PROSITE:PS00303 PROSITE:PS50222 Prosite:PS00018 GO:GO:0005509
Gene3D:1.10.238.10 InterPro:IPR018247 InterPro:IPR013787
Pfam:PF01023 OMA:YGQSGRQ GeneTree:ENSGT00530000063634 EMBL:CU633752
Ensembl:ENSSSCT00000007238 Uniprot:F1ST35
Length = 562
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 12 QRGECTR-GDGCKFSHNEQRAANTGGGPQDR---SSRWGHE--KFEGFSWGKNDSSSRAT 65
Q G+ R G G + ++++ + G DR SS +GH + +G +G+ D S+++
Sbjct: 383 QYGQTERQGQGSHYGQIDRQSQGSHYGQTDRQGQSSHYGHTDTQGQGSHYGQIDRQSQSS 442
Query: 66 GSGRVALEGNPN---QSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSR 122
G+ +G + Q+DR+ + R+ +G+ + + H E R
Sbjct: 443 HYGQTDRQGQSSHYGQTDRQGQGSHYGQTDRQGQSSHYGQTDRQGQGSHYGQTE---RQE 499
Query: 123 EDHYRRDEKRPKRHESE-SYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
+ +RRD++ HE E + R D+ D++ R D +H +ER
Sbjct: 500 QTRHRRDKQT---HEDEQTRQRRDKQTHEEDQNCQQRQDRQTHEDKER 544
Score = 108 (43.1 bits), Expect = 0.00073, P = 0.00073
Identities = 40/184 (21%), Positives = 83/184 (45%)
Query: 3 EERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDR---SSRWGHE--KFEGFSWGK 57
+ +G+ + + E +G G + ++++ + G DR SS +GH + +G +G+
Sbjct: 376 DRQGLSSQYGQTE-RQGQGSHYGQIDRQSQGSHYGQTDRQGQSSHYGHTDTQGQGSHYGQ 434
Query: 58 NDSSSRATGSGRVALEGNPN---QSDRR-------EEKRSIRHDHR-EKPREDHGRREDK 106
D S+++ G+ +G + Q+DR+ + R + H + R+ G +
Sbjct: 435 IDRQSQSSHYGQTDRQGQSSHYGQTDRQGQGSHYGQTDRQGQSSHYGQTDRQGQGSHYGQ 494
Query: 107 RSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGG-DKSS-TGRGDSSSH 164
R+ + + ++ ED R + + HE + ++ QDR+ DK G D SH
Sbjct: 495 TERQEQTRHRRDKQTHEDEQTRQRRDKQTHEEDQNCQQRQDRQTHEDKERYQGSQDQQSH 554
Query: 165 RHRE 168
R ++
Sbjct: 555 RTQQ 558
>UNIPROTKB|E2QSN7 [details] [associations]
symbol:ZC3H18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
Ensembl:ENSCAFT00000031642 Uniprot:E2QSN7
Length = 950
Score = 93 (37.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 90 HDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHE--SESYLREDQ 146
H++RE+ RE + R+ +R R + E E R RE R+ +R K + E + RE
Sbjct: 393 HNYRERERERERENRQRERERERERDRERERRQRERERERERERDKERQRRKEEWERERA 452
Query: 147 DRRGGDKSSTGRGDSSSHRHRER 169
R D+ R D R +E+
Sbjct: 453 KRDDKDRQHRDR-DREKEREKEK 474
Score = 91 (37.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 82 REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHES--- 138
RE +R ++R++ RE R+ +R RR + R RE RD++R +R E
Sbjct: 396 RERERERERENRQRERERERERDRERERRQRE------RERERERERDKERQRRKEEWER 449
Query: 139 ESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
E R+D+DR+ D+ + + + R
Sbjct: 450 ERAKRDDKDRQHRDRDREKEREKEKEKPKPR 480
Score = 66 (28.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 5 RGVCRAFQRGECTRGDGCKFSH 26
R CR F +G CT G C+F H
Sbjct: 215 RPTCRFFMKGNCTWGMNCRFIH 236
>TAIR|locus:2087347 [details] [associations]
symbol:AT3G25840 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA;ISS] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006468
"protein phosphorylation" evidence=IEA;ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 SUPFAM:SSF56112 GO:GO:0004674 HSSP:Q00534 KO:K08827
HOGENOM:HOG000197082 EMBL:AY092978 EMBL:AY128789 IPI:IPI00527177
RefSeq:NP_189213.2 UniGene:At.26477 UniGene:At.37317
ProteinModelPortal:Q8RWN3 SMR:Q8RWN3 PRIDE:Q8RWN3
EnsemblPlants:AT3G25840.1 GeneID:822178 KEGG:ath:AT3G25840
TAIR:At3g25840 InParanoid:Q8RWN3 OMA:RTEERYH PhylomeDB:Q8RWN3
ProtClustDB:CLSN2917954 ArrayExpress:Q8RWN3 Genevestigator:Q8RWN3
Uniprot:Q8RWN3
Length = 935
Score = 115 (45.5 bits), Expect = 0.00015, P = 0.00015
Identities = 46/153 (30%), Positives = 69/153 (45%)
Query: 28 EQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRS 87
++R GGP +R S+ ++ G S + S+SR + GR + ++S RE + S
Sbjct: 146 DKRWDKEAGGPSERVSKLSYDN--GRS-SFSPSNSRQSNEGRAR---SRSKSHDRERETS 199
Query: 88 IRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD--EKRPKRHESESYLRE- 144
R E D GR D H D + R+ E ++RR E+ +++ E R+
Sbjct: 200 -RSRFAEDEFSDRGRHHDSSRDYHHDRVD-SVRTEERYHRRGRYEENDRQYSREVLERDR 257
Query: 145 ----DQDRRGG--DKSSTG--RGDSSSHRHRER 169
D DR G D+ S G R D S R RER
Sbjct: 258 SKERDMDREGSIRDRDSEGSKRRDKDSDRRRER 290
>UNIPROTKB|E2RSE4 [details] [associations]
symbol:PPIG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 GO:GO:0006457
GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413
GeneTree:ENSGT00550000074595 EMBL:AAEX03017743
Ensembl:ENSCAFT00000019654 Uniprot:E2RSE4
Length = 738
Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
Identities = 38/150 (25%), Positives = 60/150 (40%)
Query: 26 HNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEK 85
HN ++R EK + S GK+ SR+ + LE N+ D + K
Sbjct: 463 HNRHEEKRMRSRSKERDHEIIKEKEKSDSKGKDQERSRSKEKSK-QLESKSNEHDHNKSK 521
Query: 86 RSIRH-DHREKPRED-HGRRE-DKRSRRHSDNNEFEARSREDHYRRDEKRPK---RHESE 139
R R + R+ G+ + R+R S + + R R + RD R K R+ +
Sbjct: 522 EKDRRAQSRSRERDTTKGKHSYNSRTRERSRSRDRSRRVRSRSHDRDRSRSKDYHRYREQ 581
Query: 140 SYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
Y R + R +++ GR S R R R
Sbjct: 582 EYRRRGRSRSRERRATPGRSRSKDRRRRRR 611
Score = 110 (43.8 bits), Expect = 0.00055, P = 0.00055
Identities = 37/156 (23%), Positives = 70/156 (44%)
Query: 25 SHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGK----NDSSSRATGSGRVALEGNPNQSD 80
+ E++ + ++R R EK E ++ K S SR+ + + + +
Sbjct: 405 NEKEKKVKDHKSNSKERDIRRNSEKDEKYNKNKVKKRAKSKSRSKSKEKSKSKERDTKHN 464
Query: 81 RREEKR----SIRHDH---REKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRP 133
R EEKR S DH +EK + D ++ +RSR + + E++S E + + +++
Sbjct: 465 RHEEKRMRSRSKERDHEIIKEKEKSDSKGKDQERSRSKEKSKQLESKSNEHDHNKSKEKD 524
Query: 134 KRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
+R +S S RE +G ++ + S R R R
Sbjct: 525 RRAQSRS--RERDTTKGKHSYNSRTRERSRSRDRSR 558
>UNIPROTKB|J9PAE8 [details] [associations]
symbol:PPIG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 GO:GO:0006457
GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413
GeneTree:ENSGT00550000074595 KO:K09566 CTD:9360 OMA:NKKFDHE
EMBL:AAEX03017743 RefSeq:XP_849611.1 Ensembl:ENSCAFT00000044329
GeneID:607519 KEGG:cfa:607519 Uniprot:J9PAE8
Length = 753
Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
Identities = 38/150 (25%), Positives = 60/150 (40%)
Query: 26 HNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEK 85
HN ++R EK + S GK+ SR+ + LE N+ D + K
Sbjct: 478 HNRHEEKRMRSRSKERDHEIIKEKEKSDSKGKDQERSRSKEKSK-QLESKSNEHDHNKSK 536
Query: 86 RSIRH-DHREKPRED-HGRRE-DKRSRRHSDNNEFEARSREDHYRRDEKRPK---RHESE 139
R R + R+ G+ + R+R S + + R R + RD R K R+ +
Sbjct: 537 EKDRRAQSRSRERDTTKGKHSYNSRTRERSRSRDRSRRVRSRSHDRDRSRSKDYHRYREQ 596
Query: 140 SYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
Y R + R +++ GR S R R R
Sbjct: 597 EYRRRGRSRSRERRATPGRSRSKDRRRRRR 626
Score = 110 (43.8 bits), Expect = 0.00056, P = 0.00056
Identities = 37/156 (23%), Positives = 70/156 (44%)
Query: 25 SHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGK----NDSSSRATGSGRVALEGNPNQSD 80
+ E++ + ++R R EK E ++ K S SR+ + + + +
Sbjct: 420 NEKEKKVKDHKSNSKERDIRRNSEKDEKYNKNKVKKRAKSKSRSKSKEKSKSKERDTKHN 479
Query: 81 RREEKR----SIRHDH---REKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRP 133
R EEKR S DH +EK + D ++ +RSR + + E++S E + + +++
Sbjct: 480 RHEEKRMRSRSKERDHEIIKEKEKSDSKGKDQERSRSKEKSKQLESKSNEHDHNKSKEKD 539
Query: 134 KRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
+R +S S RE +G ++ + S R R R
Sbjct: 540 RRAQSRS--RERDTTKGKHSYNSRTRERSRSRDRSR 573
>RGD|1559763 [details] [associations]
symbol:Zrsr2 "zinc finger (CCCH type), RNA binding motif and
serine/arginine rich 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000245
"spliceosomal complex assembly" evidence=ISO] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030628 "pre-mRNA 3'-splice
site binding" evidence=ISO] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
RGD:1559763 GO:GO:0005730 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003723 PANTHER:PTHR12620
GeneTree:ENSGT00530000063193 OrthoDB:EOG4CNQRM CTD:8233
IPI:IPI00358500 RefSeq:XP_001067753.2 RefSeq:XP_217612.5
UniGene:Rn.26786 Ensembl:ENSRNOT00000045300 GeneID:302670
KEGG:rno:302670 UCSC:RGD:1559763 NextBio:649974 Uniprot:D3ZHQ8
Length = 541
Score = 111 (44.1 bits), Expect = 0.00027, P = 0.00027
Identities = 48/175 (27%), Positives = 62/175 (35%)
Query: 2 REERGVCRAFQRGECTRGDGCKFSH------NEQRAANTGGGPQDRSSRWGHEKFEGFSW 55
R + +C F+ +C RG C F H NE R AN S W F S
Sbjct: 306 RWKMAICGLFEVQQCPRGKHCNFLHVFRNPNNEYREANRD---IYLSPDWTSSSFAKSSE 362
Query: 56 GKNDSS--SRATGSGRVALEGNPNQSDRR--EEKRSIRHDHREKPREDHGRREDKRSRRH 111
+ +S G R +P S +R E R +HR K HG K RH
Sbjct: 363 RRERASHYDEYYGRSRRRRSPSPGLSYKRNGESDRKSSSNHRVKKSHKHGM---KNRERH 419
Query: 112 SDNNEFEARSREDHYRR--DEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSH 164
S + R + DH + R RH + + R S GRG SH
Sbjct: 420 SSRSR---RRKRDHSLGPWSQSRRSRHSRSRSHSQSRSRSSSRSRSCGRGRGWSH 471
Score = 102 (41.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 31/115 (26%), Positives = 47/115 (40%)
Query: 25 SHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREE 84
S +R + G Q R SR + S ++ S SR+ G GR + R+
Sbjct: 423 SRRRKRDHSLGPWSQSRRSRHSRSRSHSQSRSRSSSRSRSCGRGRGWSHSRSHSRSRKRS 482
Query: 85 KRSIRHDHREKPREDHGRREDKRSRRHS-DNNEFEARSREDHYRRDEKRPKRHES 138
+ R R + R + +R RS HS ++ +RSR RR R K +S
Sbjct: 483 RNRSRSRSRNRNRNRNRKRNQSRSWSHSHSHSRSSSRSRSPGRRRSGSRDKTTQS 537
Score = 48 (22.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 1 MREERGVCRAFQR-GECTRGDGCKFSHN 27
+ ++R C + + G C GD C HN
Sbjct: 165 LEKDRANCPFYSKTGACRFGDRCSRKHN 192
>UNIPROTKB|G4NEX9 [details] [associations]
symbol:MGG_00716 "Microfibril-associated protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR009730 EMBL:CM001235 KO:K13110
PANTHER:PTHR15327 Pfam:PF06991 RefSeq:XP_003718289.1
EnsemblFungi:MGG_00716T0 GeneID:2674856 KEGG:mgr:MGG_00716
Uniprot:G4NEX9
Length = 489
Score = 112 (44.5 bits), Expect = 0.00017, P = 0.00017
Identities = 49/168 (29%), Positives = 73/168 (43%)
Query: 9 RAFQRGECTR-GDGCKFSHNEQRAANTG----GGPQDRSSRWGHEKFEGFSWGKNDSSSR 63
+A Q + T+ G + + R+ +TG G +DR R ++F+G + D+ R
Sbjct: 324 QALQMRDMTKLGKKGATRYKDLRSEDTGRWGDSGGKDRYGRGLGDRFDGDERFRPDND-R 382
Query: 64 ATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSRE 123
G G +G N E K R D ++ R D R D++S R + + R+
Sbjct: 383 GGGYGPDGAKG-ANAIPLGERKEDSRRDRYQESRRDDSRDRDRKSYRTRSRSR--SPRRQ 439
Query: 124 DHYRRDEKRPKRHESESYLREDQD-RRGGDKSSTGRGD-SSSHRHRER 169
D RRD R RH S S R+ +D R K ST RG H + R
Sbjct: 440 D--RRDYDRD-RHTSRSPRRDRRDYSRERRKRSTSRGGRDGDHGDKRR 484
>UNIPROTKB|Q86VM9 [details] [associations]
symbol:ZC3H18 "Zinc finger CCCH domain-containing protein
18" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000571 PROSITE:PS50103 SMART:SM00356
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
EMBL:AC116552 CTD:124245 eggNOG:NOG74292 HOGENOM:HOG000155765
KO:K13092 OrthoDB:EOG46T31J EMBL:AK056632 EMBL:BC001584
EMBL:BC050463 IPI:IPI00293312 IPI:IPI00328929 RefSeq:NP_653205.3
UniGene:Hs.93670 ProteinModelPortal:Q86VM9 SMR:Q86VM9 IntAct:Q86VM9
PhosphoSite:Q86VM9 DMDM:269849528 PaxDb:Q86VM9 PRIDE:Q86VM9
DNASU:124245 Ensembl:ENST00000301011 GeneID:124245 KEGG:hsa:124245
UCSC:uc002fky.3 UCSC:uc021tmm.1 GeneCards:GC16P088636
H-InvDB:HIX0013334 HGNC:HGNC:25091 HPA:HPA040847 HPA:HPA041327
neXtProt:NX_Q86VM9 PharmGKB:PA162409533 HOVERGEN:HBG103346
InParanoid:Q86VM9 PhylomeDB:Q86VM9 ChiTaRS:ZC3H18 GenomeRNAi:124245
NextBio:81250 ArrayExpress:Q86VM9 Bgee:Q86VM9 CleanEx:HS_ZC3H18
Genevestigator:Q86VM9 Uniprot:Q86VM9
Length = 953
Score = 92 (37.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 90 HDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHE--SESYLREDQ 146
H++RE+ RE + R+ +R R + E E R RE R+ +R K + E + RE
Sbjct: 399 HNYRERERERERENRQRERERERERDRERERRQRERERERERERDKERQRRKEEWERERA 458
Query: 147 DRRGGDKSSTGRGDSSSHRHRER 169
R D+ R D R +E+
Sbjct: 459 KRDEKDRQHRDR-DREKEREKEK 480
Score = 66 (28.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 5 RGVCRAFQRGECTRGDGCKFSH 26
R CR F +G CT G C+F H
Sbjct: 221 RPTCRFFMKGNCTWGMNCRFIH 242
>UNIPROTKB|G4MZ88 [details] [associations]
symbol:MGG_08192 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CM001232
RefSeq:XP_003715168.1 EnsemblFungi:MGG_08192T0 GeneID:2678427
KEGG:mgr:MGG_08192 Uniprot:G4MZ88
Length = 1038
Score = 114 (45.2 bits), Expect = 0.00023, P = 0.00023
Identities = 43/150 (28%), Positives = 64/150 (42%)
Query: 20 DGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQS 79
D + S N G DR S +++ + +N S R+ G R G+P +S
Sbjct: 353 DSPRRSANNIEVPRPSRGYSDRRSEKKYDESSPRTSRRNISPPRSDGRSRYYGGGSPPRS 412
Query: 80 DRREEK-RSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHES 138
DRR RS R E R D RR SRR+S+ R R+ R+ +R + +
Sbjct: 413 DRRSSPTRSERSVRSE--RSD--RRRSPPSRRYSERERDRERDRDRDRDRERERERVRDR 468
Query: 139 ESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
E+ R D+ R +S + + SSH E
Sbjct: 469 ENRNR-DRTREPPSRSDSYKSQRSSHNSDE 497
>UNIPROTKB|G4N9S1 [details] [associations]
symbol:MGG_10681 "Peptidyl-prolyl cis-trans isomerase-like
4" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000504 InterPro:IPR002130
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00160 PRINTS:PR00153
PROSITE:PS50072 PROSITE:PS50102 SMART:SM00360 GO:GO:0006457
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0043581
EMBL:CM001234 GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413 KO:K12735
RefSeq:XP_003715897.1 EnsemblFungi:MGG_10681T0 GeneID:2682882
KEGG:mgr:MGG_10681 Uniprot:G4N9S1
Length = 505
Score = 111 (44.1 bits), Expect = 0.00024, P = 0.00024
Identities = 47/143 (32%), Positives = 60/143 (41%)
Query: 28 EQRAANTGG-GPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRRE-EK 85
+Q A GG G D +W K+ G++D R G V G R E +K
Sbjct: 353 KQAAKGRGGWGGVDELEKW--RKYREDD-GRDD---RPDSYGMVY--GKEEMQGRHERQK 404
Query: 86 RSIRHDHREKPREDHGRRE--DKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLR 143
HD EKPRE G R D+R R SD+ RSR RR+ R R R
Sbjct: 405 AGPGHD-AEKPREGGGDRNGYDQRRDRASDSRR---RSRSRSPRRERHRDSRDGRRRDDR 460
Query: 144 EDQDRRGGDKSSTGRGDSSSHRH 166
+ +RGG++S R D RH
Sbjct: 461 DSGSKRGGERSRHDR-DRGQERH 482
>UNIPROTKB|J9P1V6 [details] [associations]
symbol:J9P1V6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000786 "nucleosome"
evidence=IEA] InterPro:IPR005819 PRINTS:PR00624 GO:GO:0003677
GO:GO:0006334 GO:GO:0000786 GeneTree:ENSGT00700000104356
EMBL:AAEX03010240 Ensembl:ENSCAFT00000047113 OMA:PRANTHR
Uniprot:J9P1V6
Length = 202
Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 66 GSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDH 125
G GR +G + RREEKR RE+ R + RRE+KR +R + E R +E
Sbjct: 51 GKGREG-KGRKEKKKRREEKR------REEKRREEKRREEKRKKRREEKRREEKR-KERK 102
Query: 126 YRRDEKRPKRHESESYL-REDQDRRGGDKSSTGRGDSSSHRHRER 169
R+++KR ++ E + R+++ + +K + + ++R
Sbjct: 103 KRKEKKRKEKKEKKKRKERKEKKEKKREKRKEKKRKEKKRKEKKR 147
Score = 103 (41.3 bits), Expect = 0.00048, P = 0.00048
Identities = 25/92 (27%), Positives = 52/92 (56%)
Query: 78 QSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRP--KR 135
+ RREEKR R +EK R++ ++E K+ + + E + R++ R+++KR KR
Sbjct: 90 EEKRREEKRKERKKRKEKKRKE--KKEKKKRKERKEKKEKKREKRKEKKRKEKKRKEKKR 147
Query: 136 HESESYLREDQDRRGGDKSSTGRGDSSSHRHR 167
E + ++ ++++ +K + R +++HR R
Sbjct: 148 KEKKRKEKKRKEKKRKEKKISPR--ANTHRKR 177
Score = 101 (40.6 bits), Expect = 0.00091, P = 0.00091
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 73 EGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRR--HSDNNEFEARSREDHYRRDE 130
E + RREEKR R + R+K RE+ RRE+KR R + E + ++ R E
Sbjct: 67 EEKRREEKRREEKR--REEKRKKRREEK-RREEKRKERKKRKEKKRKEKKEKKKRKERKE 123
Query: 131 KRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
K+ K+ E + + +R K + + ++R
Sbjct: 124 KKEKKREKRKEKKRKEKKRKEKKRKEKKRKEKKRKEKKR 162
>RGD|1303257 [details] [associations]
symbol:Zc3h18 "zinc finger CCCH-type containing 18"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000571 PROSITE:PS50103
SMART:SM00356 RGD:1303257 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 CTD:124245 eggNOG:NOG74292 KO:K13092
HOVERGEN:HBG103346 EMBL:AY389807 EMBL:AY389808 IPI:IPI00400666
IPI:IPI00563982 RefSeq:NP_958819.1 UniGene:Rn.36848
PhosphoSite:Q6TQE1 PRIDE:Q6TQE1 GeneID:292067 KEGG:rno:292067
UCSC:RGD:1303257 NextBio:633689 Genevestigator:Q6TQE1
Uniprot:Q6TQE1
Length = 947
Score = 91 (37.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 32/89 (35%), Positives = 44/89 (49%)
Query: 73 EGNP--NQSDR-REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD 129
E P N DR RE +R R RE+ RE R ++R R E E R +E R++
Sbjct: 389 EAEPYHNYRDRERERERENRQRERERDRE-RDRERERRQRERERERERE-RDKERQRRKE 446
Query: 130 E---KRPKRHESESYLRE-DQDR-RGGDK 153
E +R KR E + R+ D+D+ R DK
Sbjct: 447 EWERERAKRDEKDRQHRDRDRDKDRDKDK 475
Score = 66 (28.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 5 RGVCRAFQRGECTRGDGCKFSH 26
R CR F +G CT G C+F H
Sbjct: 216 RPTCRFFMKGNCTWGMNCRFIH 237
>UNIPROTKB|Q6TQE1 [details] [associations]
symbol:Zc3h18 "Zinc finger CCCH domain-containing protein
18" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 PROSITE:PS50103 SMART:SM00356 RGD:1303257
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 CTD:124245
eggNOG:NOG74292 KO:K13092 HOVERGEN:HBG103346 EMBL:AY389807
EMBL:AY389808 IPI:IPI00400666 IPI:IPI00563982 RefSeq:NP_958819.1
UniGene:Rn.36848 PhosphoSite:Q6TQE1 PRIDE:Q6TQE1 GeneID:292067
KEGG:rno:292067 UCSC:RGD:1303257 NextBio:633689
Genevestigator:Q6TQE1 Uniprot:Q6TQE1
Length = 947
Score = 91 (37.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 32/89 (35%), Positives = 44/89 (49%)
Query: 73 EGNP--NQSDR-REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD 129
E P N DR RE +R R RE+ RE R ++R R E E R +E R++
Sbjct: 389 EAEPYHNYRDRERERERENRQRERERDRE-RDRERERRQRERERERERE-RDKERQRRKE 446
Query: 130 E---KRPKRHESESYLRE-DQDR-RGGDK 153
E +R KR E + R+ D+D+ R DK
Sbjct: 447 EWERERAKRDEKDRQHRDRDRDKDRDKDK 475
Score = 66 (28.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 5 RGVCRAFQRGECTRGDGCKFSH 26
R CR F +G CT G C+F H
Sbjct: 216 RPTCRFFMKGNCTWGMNCRFIH 237
>DICTYBASE|DDB_G0267796 [details] [associations]
symbol:DDB_G0267796 "initiation factor eIF-4 gamma,
MA3 domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
dictyBase:DDB_G0267796 SUPFAM:SSF48371 GO:GO:0003677
EMBL:AAFI02000003 GO:GO:0005681 GO:GO:0003743 GO:GO:0000398
Gene3D:1.25.40.180 eggNOG:NOG293831 KO:K13100 InterPro:IPR003891
Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 OMA:VENEERY
RefSeq:XP_647313.1 ProteinModelPortal:Q55G70 STRING:Q55G70
EnsemblProtists:DDB0233565 GeneID:8616124 KEGG:ddi:DDB_G0267796
InParanoid:Q55G70 Uniprot:Q55G70
Length = 925
Score = 113 (44.8 bits), Expect = 0.00027, P = 0.00027
Identities = 49/155 (31%), Positives = 69/155 (44%)
Query: 20 DGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQS 79
DG SH QR ++ R R + ++ S + S SR+ R + N+
Sbjct: 5 DGEIISHQYQRGRDSEY--DSRRERDYKDSYDNKSKDRERSKSRSRSRDR-----DRNRY 57
Query: 80 DRREEKRSIRHDHREKPREDHGRREDK-RSR-RHSDNNEFEARSRE-DHYR-RDEKRPKR 135
DR E R + + RE+ R DH R D+ R R R+ D + R+R+ D R RD R +
Sbjct: 58 DRDRE-RDLEKE-RERDR-DHDRNRDRDRDRDRNRDRDRDHDRNRDRDRNRDRDHDRDRD 114
Query: 136 HESESYLREDQDR-RGGDKSSTGRGDSSSHRHRER 169
E E D+DR R G+K D R RER
Sbjct: 115 REREKDRERDRDRDRYGNKERDRDRDRERDRDRER 149
>UNIPROTKB|B4DJ96 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0005925 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 UniGene:Hs.130293 HGNC:HGNC:24309
ChiTaRS:LUC7L3 EMBL:AC005921 EMBL:AK295983 IPI:IPI00966213
STRING:B4DJ96 Ensembl:ENST00000544170 UCSC:uc010wmw.2
Uniprot:B4DJ96
Length = 356
Score = 109 (43.4 bits), Expect = 0.00027, P = 0.00027
Identities = 33/91 (36%), Positives = 45/91 (49%)
Query: 79 SDRREEKRSIR-HDH-REKPREDH-GRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 135
S R ++R R DH R + RE R D+R R D +E + RSR RR + R ++
Sbjct: 224 SSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRK 283
Query: 136 ---HESESYLREDQDRRGGDKSSTGRGDSSS 163
H S+S RE QDR+ +K G D S
Sbjct: 284 SYKHRSKSRDRE-QDRKSKEKEKRGSDDKKS 313
Score = 105 (42.0 bits), Expect = 0.00092, P = 0.00091
Identities = 34/103 (33%), Positives = 49/103 (47%)
Query: 78 QSDRREEKRSIRHDHREKPR-EDHGRREDKRSR-RHSDNNEFEARSRE-DHYR---RDEK 131
+ + RE KR + REK R D RR+ RSR RHS SR DH R R+ +
Sbjct: 188 EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERR 247
Query: 132 RPK---RHESESYLREDQDRRGG--DKSSTGRGDSSSHRHRER 169
R + R S S+ R ++ R D+ + D S++HR +
Sbjct: 248 RSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSK 290
>UNIPROTKB|H0YA81 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0005925 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 HGNC:HGNC:24309 ChiTaRS:LUC7L3
EMBL:AC005921 Ensembl:ENST00000504065 Bgee:H0YA81 Uniprot:H0YA81
Length = 207
Score = 105 (42.0 bits), Expect = 0.00028, P = 0.00028
Identities = 34/103 (33%), Positives = 49/103 (47%)
Query: 78 QSDRREEKRSIRHDHREKPR-EDHGRREDKRSR-RHSDNNEFEARSRE-DHYR---RDEK 131
+ + RE KR + REK R D RR+ RSR RHS SR DH R R+ +
Sbjct: 84 EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERR 143
Query: 132 RPK---RHESESYLREDQDRRGG--DKSSTGRGDSSSHRHRER 169
R + R S S+ R ++ R D+ + D S++HR +
Sbjct: 144 RSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSK 186
>UNIPROTKB|F1Q0J3 [details] [associations]
symbol:CALD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0017022 "myosin binding" evidence=IEA]
[GO:0006936 "muscle contraction" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] InterPro:IPR006017 PRINTS:PR01076 GO:GO:0006936
InterPro:IPR006018 Pfam:PF02029 OMA:WRDAEEN
GeneTree:ENSGT00700000104480 EMBL:AAEX03010247
Ensembl:ENSCAFT00000005101 Uniprot:F1Q0J3
Length = 730
Score = 112 (44.5 bits), Expect = 0.00029, P = 0.00029
Identities = 37/148 (25%), Positives = 63/148 (42%)
Query: 3 EERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSS 62
EE G + E + G + N+ AA G GP+ + RWG + G + +
Sbjct: 167 EEEGKAEEEEEEEKAK-PGSR-EENQVEAAAAGAGPEAAALRWGTGQPGAEEPGPEERGA 224
Query: 63 RATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRR-EDKRSRRHSDNNEFEARS 121
R LE ++ + E++R R + RE R E +R+RR + E E R
Sbjct: 225 RGPAEAAARLEEEEGETTKAEQER--REAAEQAGREAEERAAEQERARREAAEREKE-RE 281
Query: 122 REDHYRRDEKRPKRHESESYLREDQDRR 149
RE R+ +R + +E + ++R+
Sbjct: 282 REKERERERERERERVAEQERKAAEERQ 309
>TAIR|locus:2165447 [details] [associations]
symbol:U2AF35B species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0048573
"photoperiodism, flowering" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008380
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0048573
EMBL:AB008264 EMBL:AB007647 HSSP:Q01081 PANTHER:PTHR12620
UniGene:At.8456 eggNOG:NOG323920 HOGENOM:HOG000178619 KO:K12836
OMA:SERHDRD ProtClustDB:CLSN2686618 EMBL:AF409140 EMBL:AY136436
EMBL:BT000219 IPI:IPI00531951 RefSeq:NP_199096.1 RefSeq:NP_974870.1
UniGene:At.25814 ProteinModelPortal:Q9FMY5 SMR:Q9FMY5 IntAct:Q9FMY5
STRING:Q9FMY5 PaxDb:Q9FMY5 PRIDE:Q9FMY5 EnsemblPlants:AT5G42820.1
EnsemblPlants:AT5G42820.2 GeneID:834293 KEGG:ath:AT5G42820
GeneFarm:4540 TAIR:At5g42820 InParanoid:Q9FMY5 PhylomeDB:Q9FMY5
Genevestigator:Q9FMY5 Uniprot:Q9FMY5
Length = 283
Score = 107 (42.7 bits), Expect = 0.00032, P = 0.00032
Identities = 35/126 (27%), Positives = 52/126 (41%)
Query: 8 CRAFQRGECTRGDGCKFSHNEQRAANTGG---GPQDRSSRWG-HEKFEGFSWGKNDSSSR 63
CR ++ C RG C F H +Q + G RS R G + S + SR
Sbjct: 154 CRQYEENSCNRGGYCNFMHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSR 213
Query: 64 ATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSRE 123
G V + + + + +R RS RHD R HG + RS R+ E R+R
Sbjct: 214 ERERGDVR-DRDRHGNGKRSSDRSERHDRDGGGRRRHGSPKRSRSPRNVREGSEERRARI 272
Query: 124 DHYRRD 129
+ + R+
Sbjct: 273 EQWNRE 278
>UNIPROTKB|F8VVA2 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
GO:GO:0005739 GO:GO:0005886 GO:GO:0005634 HGNC:HGNC:17347
EMBL:AC117498 IPI:IPI01020999 Ensembl:ENST00000552512
ArrayExpress:F8VVA2 Bgee:F8VVA2 Uniprot:F8VVA2
Length = 182
Score = 103 (41.3 bits), Expect = 0.00033, P = 0.00033
Identities = 29/90 (32%), Positives = 38/90 (42%)
Query: 80 DRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESE 139
DR+ R HR + R G R RSR S E + RE RD + R +
Sbjct: 35 DRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKSAERERRHKERERDKERDRNKKDRDRDK 94
Query: 140 SYLREDQDRRGGDKSSTGRG-DSSSHRHRE 168
R D+DR+ S GRG D S + R+
Sbjct: 95 DGHRRDKDRKRSSLSP-GRGKDFKSRKDRD 123
>UNIPROTKB|J9NYY3 [details] [associations]
symbol:FLG2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001751 InterPro:IPR002048 InterPro:IPR011992
PROSITE:PS00303 PROSITE:PS50222 Prosite:PS00018 GO:GO:0005509
Gene3D:1.10.238.10 InterPro:IPR018247 GeneTree:ENSGT00530000063634
EMBL:AAEX03011063 EMBL:AAEX03011064 EMBL:AAEX03011065
Ensembl:ENSCAFT00000049887 OMA:RGHAGDS Uniprot:J9NYY3
Length = 2801
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 41/157 (26%), Positives = 63/157 (40%)
Query: 19 GDGCKFSHNEQRAANTGGGPQDR--SSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNP 76
GD + S ++QR G Q S G + +G S G + +SR GS R
Sbjct: 1432 GDSARHSESQQRHRTNHGQSQSGHGQSDTGTGRRQGSSHGHSLDTSRLPGSHRAGSPSRG 1491
Query: 77 NQSDRREEKRSIRHDHREKPREDHG--RREDKRSRRHSDN------NEFEARS-REDHYR 127
+ RS RE R G R S RHS++ N +++S R+ H+
Sbjct: 1492 HADSVHGRSRSSTGGRRETQRNQQGSARGHAGDSARHSESQQRHRTNHGQSQSDRQGHHH 1551
Query: 128 RDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSH 164
+ + RH + ED +R+ G S +G + H
Sbjct: 1552 QQSQDSSRHSRTGHGSEDSERQYGSGSGNQQGSARGH 1588
>FB|FBgn0027617 [details] [associations]
symbol:CG5808 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR000504 InterPro:IPR002130
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00160 PRINTS:PR00153
PROSITE:PS50072 PROSITE:PS50102 SMART:SM00360 EMBL:AE014297
GO:GO:0006457 GO:GO:0022008 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
eggNOG:COG0724 GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413
GeneTree:ENSGT00670000097658 KO:K12735 EMBL:AF132148
RefSeq:NP_651291.1 UniGene:Dm.3212 HSSP:P14832 SMR:Q9XYZ6
IntAct:Q9XYZ6 MINT:MINT-970905 STRING:Q9XYZ6
EnsemblMetazoa:FBtr0084738 GeneID:42957 KEGG:dme:Dmel_CG5808
UCSC:CG5808-RA FlyBase:FBgn0027617 InParanoid:Q9XYZ6 OMA:SIWGVVE
OrthoDB:EOG49S4P0 GenomeRNAi:42957 NextBio:831514 Uniprot:Q9XYZ6
Length = 653
Score = 111 (44.1 bits), Expect = 0.00035, P = 0.00035
Identities = 39/145 (26%), Positives = 60/145 (41%)
Query: 23 KFSHNEQRAANTGGGPQD---RSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQS 79
++S + R P+D R SR +K S + + R + S R P Q+
Sbjct: 450 RYSRSRDREERRPSRPRDQLGRRSRSRDQKERRRSRPREQNERRRSRS-RDQTGKRPTQN 508
Query: 80 DRREEKRSIRHDHREKPREDH-GRREDKRSRRHSDNNEFEARSREDHYRRDEKRP-KRHE 137
R + R H +E R D RE R++R S ++R+REDH P K HE
Sbjct: 509 RDRNDSRRF-HSPQEGRRNDERSHRETSRNQRRSPERRQQSRNREDHRMDTHSSPNKSHE 567
Query: 138 SESYLREDQDRRGGDKSSTGRGDSS 162
+ L ++ ++ KS SS
Sbjct: 568 KKRKLSVEKSKKQAKKSKRAASSSS 592
>DICTYBASE|DDB_G0279535 [details] [associations]
symbol:DDB_G0279535 "DUF1777 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0279535 EMBL:AAFI02000031 eggNOG:NOG137437
InterPro:IPR013957 Pfam:PF08648 OMA:FRSTKNT RefSeq:XP_641685.2
EnsemblProtists:DDB0238807 GeneID:8622093 KEGG:ddi:DDB_G0279535
Uniprot:Q54WN2
Length = 296
Score = 107 (42.7 bits), Expect = 0.00035, P = 0.00035
Identities = 39/119 (32%), Positives = 54/119 (45%)
Query: 39 QDRSS-RWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPR 97
+DR R GH +G G D R + N+S R+ R + +HR+ R
Sbjct: 88 RDRDGYRDGHR--DGHRDGHRDRDRDRDNRNR---DLRDNRSSNRDFNR--KDNHRDNDR 140
Query: 98 EDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRR-GGDKSS 155
D+ RR++ R R HS + +RSRE RD KR + H +DRR GGD S
Sbjct: 141 RDNDRRDNGR-RSHSRSRS-RSRSRE----RDRKRQRDHSRSRSRSRSRDRRDGGDNGS 193
>ASPGD|ASPL0000028535 [details] [associations]
symbol:AN5535 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] EMBL:BN001305 EMBL:AACD01000094
InterPro:IPR006768 InterPro:IPR006767 Pfam:PF04677 Pfam:PF04676
eggNOG:NOG248199 HOGENOM:HOG000191634 OrthoDB:EOG4F21BW
RefSeq:XP_663139.1 ProteinModelPortal:Q5B1P5
EnsemblFungi:CADANIAT00003547 GeneID:2871820 KEGG:ani:AN5535.2
OMA:ECDDDEW Uniprot:Q5B1P5
Length = 685
Score = 111 (44.1 bits), Expect = 0.00037, P = 0.00037
Identities = 32/94 (34%), Positives = 46/94 (48%)
Query: 81 RREEKRSIRHDHREKPRE-DHGR-REDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHES 138
RRE+ +H HR RE D R R+ +R R S + RS H R E+ R+ +
Sbjct: 19 RREKSDGDKHRHRHHDRERDRDRDRDHRRDRDRSREHRHRHRSHRHHSRSRERGSDRN-N 77
Query: 139 ESYLREDQDRRGGDKSSTGRGDSSSH---RHRER 169
ES+ R+D R + S+ G+ H RHRE+
Sbjct: 78 ESH-RDDGHRHKRSRQSSDHGEDRDHHKRRHREK 110
>UNIPROTKB|Q3SX41 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9913 "Bos
taurus" [GO:0008380 "RNA splicing" evidence=ISS] [GO:0006950
"response to stress" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0006915 GO:GO:0006950
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0003729
GO:GO:0006397 GO:GO:0005925 eggNOG:COG5200 HOVERGEN:HBG062167
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 HOGENOM:HOG000215956 EMBL:BC104519
IPI:IPI00715642 RefSeq:NP_001029856.1 UniGene:Bt.1595 STRING:Q3SX41
PRIDE:Q3SX41 Ensembl:ENSBTAT00000002938 GeneID:539955
KEGG:bta:539955 CTD:51747 InParanoid:Q3SX41 OMA:ISVPLWK
OrthoDB:EOG4QJRNZ NextBio:20878323 Uniprot:Q3SX41
Length = 432
Score = 109 (43.4 bits), Expect = 0.00037, P = 0.00037
Identities = 33/91 (36%), Positives = 45/91 (49%)
Query: 79 SDRREEKRSIR-HDH-REKPREDH-GRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 135
S R ++R R DH R + RE R D+R R D +E + RSR RR + R ++
Sbjct: 300 SSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRK 359
Query: 136 ---HESESYLREDQDRRGGDKSSTGRGDSSS 163
H S+S RE QDR+ +K G D S
Sbjct: 360 SYKHRSKSRDRE-QDRKSKEKEKRGSDDKKS 389
>UNIPROTKB|O95232 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0006950 "response to stress" evidence=IMP] [GO:0008380 "RNA
splicing" evidence=IMP] [GO:0003729 "mRNA binding" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0006915 GO:GO:0006950
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0003729
GO:GO:0006397 GO:GO:0005925 EMBL:CH471109 eggNOG:COG5200
HOVERGEN:HBG062167 InterPro:IPR004882 PANTHER:PTHR12375
Pfam:PF03194 HOGENOM:HOG000215956 CTD:51747 OrthoDB:EOG4QJRNZ
EMBL:AB034205 EMBL:DQ013876 EMBL:AK001925 EMBL:AK023672
EMBL:BC056409 EMBL:AF069250 IPI:IPI00107745 IPI:IPI00448519
RefSeq:NP_006098.2 RefSeq:NP_057508.2 UniGene:Hs.130293
ProteinModelPortal:O95232 IntAct:O95232 MINT:MINT-1683180
STRING:O95232 PhosphoSite:O95232 PaxDb:O95232 PeptideAtlas:O95232
PRIDE:O95232 DNASU:51747 Ensembl:ENST00000240304
Ensembl:ENST00000505658 GeneID:51747 KEGG:hsa:51747 UCSC:uc002isq.3
GeneCards:GC17P048796 HGNC:HGNC:24309 HPA:HPA018475 HPA:HPA018484
HPA:HPA020017 MIM:609434 neXtProt:NX_O95232 PharmGKB:PA165432062
InParanoid:O95232 ChiTaRS:LUC7L3 GenomeRNAi:51747 NextBio:55830
ArrayExpress:O95232 Bgee:O95232 Genevestigator:O95232
GermOnline:ENSG00000108848 Uniprot:O95232
Length = 432
Score = 109 (43.4 bits), Expect = 0.00037, P = 0.00037
Identities = 33/91 (36%), Positives = 45/91 (49%)
Query: 79 SDRREEKRSIR-HDH-REKPREDH-GRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 135
S R ++R R DH R + RE R D+R R D +E + RSR RR + R ++
Sbjct: 300 SSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRK 359
Query: 136 ---HESESYLREDQDRRGGDKSSTGRGDSSS 163
H S+S RE QDR+ +K G D S
Sbjct: 360 SYKHRSKSRDRE-QDRKSKEKEKRGSDDKKS 389
>UNIPROTKB|Q5R8W6 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9601 "Pongo
abelii" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006915 "apoptotic process"
evidence=ISS] [GO:0006950 "response to stress" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] GO:GO:0005634
GO:GO:0006915 GO:GO:0006950 GO:GO:0008380 GO:GO:0003677
GO:GO:0016607 GO:GO:0003729 GO:GO:0006397 HOVERGEN:HBG062167
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194 CTD:51747
EMBL:CR859632 RefSeq:NP_001126042.1 UniGene:Pab.18951
ProteinModelPortal:Q5R8W6 PRIDE:Q5R8W6 GeneID:100172991
KEGG:pon:100172991 InParanoid:Q5R8W6 Uniprot:Q5R8W6
Length = 432
Score = 109 (43.4 bits), Expect = 0.00037, P = 0.00037
Identities = 33/91 (36%), Positives = 45/91 (49%)
Query: 79 SDRREEKRSIR-HDH-REKPREDH-GRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 135
S R ++R R DH R + RE R D+R R D +E + RSR RR + R ++
Sbjct: 300 SSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRK 359
Query: 136 ---HESESYLREDQDRRGGDKSSTGRGDSSS 163
H S+S RE QDR+ +K G D S
Sbjct: 360 SYKHRSKSRDRE-QDRKSKEKEKRGSDDKKS 389
>MGI|MGI:1914934 [details] [associations]
symbol:Luc7l3 "LUC7-like 3 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0006950 "response to stress"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO]
MGI:MGI:1914934 GO:GO:0005886 GO:GO:0005634 GO:GO:0006915
GO:GO:0006950 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 GO:GO:0005925 EMBL:AL645965
eggNOG:COG5200 HOVERGEN:HBG062167 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 GeneTree:ENSGT00700000104035
HOGENOM:HOG000215956 CTD:51747 OMA:ISVPLWK OrthoDB:EOG4QJRNZ
ChiTaRS:LUC7L3 EMBL:AK014362 EMBL:AK019464 EMBL:AK084714
EMBL:AK151228 EMBL:AK151839 EMBL:AL645846 EMBL:BC009092
IPI:IPI00122418 IPI:IPI00649422 IPI:IPI00752942 RefSeq:NP_080589.1
UniGene:Mm.30927 ProteinModelPortal:Q5SUF2 IntAct:Q5SUF2
STRING:Q5SUF2 PhosphoSite:Q5SUF2 PaxDb:Q5SUF2 PRIDE:Q5SUF2
Ensembl:ENSMUST00000021226 Ensembl:ENSMUST00000107820
Ensembl:ENSMUST00000107821 Ensembl:ENSMUST00000166312 GeneID:67684
KEGG:mmu:67684 UCSC:uc007kyh.1 UCSC:uc007kyi.1 UCSC:uc007kyj.1
NextBio:325251 Bgee:Q5SUF2 CleanEx:MM_3300001P08RIK
Genevestigator:Q5SUF2 GermOnline:ENSMUSG00000020863 Uniprot:Q5SUF2
Length = 432
Score = 109 (43.4 bits), Expect = 0.00037, P = 0.00037
Identities = 35/103 (33%), Positives = 49/103 (47%)
Query: 78 QSDRREEKRSIRHDHREKPR-EDHGRREDKRSR-RHSDNNEFEARSRE-DHYR---RDEK 131
+ + RE KR + REK R D RR+ RSR RHS SR DH R RD +
Sbjct: 264 EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRDRR 323
Query: 132 RPK---RHESESYLREDQDRRGG--DKSSTGRGDSSSHRHRER 169
R + R S S+ R ++ R D+ + D S++HR +
Sbjct: 324 RSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSK 366
>UNIPROTKB|P08621 [details] [associations]
symbol:SNRNP70 "U1 small nuclear ribonucleoprotein 70 kDa"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003723 "RNA binding"
evidence=IMP] [GO:0043484 "regulation of RNA splicing"
evidence=IMP] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0006397 "mRNA processing" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005654 GO:GO:0000166 GO:GO:0016607 Reactome:REACT_1675
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 EMBL:CH471177
GO:GO:0043484 GO:GO:0000398 eggNOG:COG0724 PDB:3CW1 PDB:3PGW
PDBsum:3CW1 PDBsum:3PGW KO:K11093 OMA:KKSRGYL InterPro:IPR022023
Pfam:PF12220 CTD:6625 OrthoDB:EOG4CJVJ7 EMBL:X04654 EMBL:X06814
EMBL:X06815 EMBL:X06817 EMBL:X07402 EMBL:X06816 EMBL:X06812
EMBL:X06811 EMBL:X07401 EMBL:X07403 EMBL:M22636 EMBL:M57939
EMBL:M57929 EMBL:M57930 EMBL:M57932 EMBL:M57934 EMBL:M57937
EMBL:M57935 EMBL:AK096783 EMBL:X84841 EMBL:AL117507 EMBL:BC001315
IPI:IPI00219483 IPI:IPI00219484 IPI:IPI00219485 IPI:IPI00290204
PIR:A25707 PIR:S00674 RefSeq:NP_003080.2 UniGene:Hs.467097 PDB:2L5I
PDB:2L5J PDBsum:2L5I PDBsum:2L5J ProteinModelPortal:P08621
SMR:P08621 DIP:DIP-29406N IntAct:P08621 MINT:MINT-5004037
STRING:P08621 PhosphoSite:P08621 DMDM:13635663 PaxDb:P08621
PRIDE:P08621 Ensembl:ENST00000221448 Ensembl:ENST00000401730
Ensembl:ENST00000544278 GeneID:6625 KEGG:hsa:6625 UCSC:uc002pmk.3
GeneCards:GC19P049588 HGNC:HGNC:11150 HPA:CAB001718 MIM:180740
neXtProt:NX_P08621 PharmGKB:PA35992 InParanoid:P08621
ChiTaRS:SNRNP70 EvolutionaryTrace:P08621 GenomeRNAi:6625
NextBio:25805 PMAP-CutDB:P08621 ArrayExpress:P08621 Bgee:P08621
Genevestigator:P08621 GermOnline:ENSG00000104852 Uniprot:P08621
Length = 437
Score = 109 (43.4 bits), Expect = 0.00038, P = 0.00038
Identities = 35/106 (33%), Positives = 47/106 (44%)
Query: 56 GKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDH-GRREDKRSRRHSDN 114
G++D+S G L DR E+R R R+K RE R D+R R S +
Sbjct: 212 GRDDTSRYDERPGPSPLPHRDRDRDRERERRE-RSRERDKERERRRSRSRDRRRRSRSRD 270
Query: 115 NEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGD 160
E RSRE +D R KR S S R ++R ++ G GD
Sbjct: 271 KEERRRSRERSKDKDRDR-KRRSSRSRERARRERERKEELRGGGGD 315
>TAIR|locus:2162107 [details] [associations]
symbol:AT5G55670 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AB009050 HSSP:Q9V535 KO:K14398 OMA:GKGSAPN IPI:IPI00548235
RefSeq:NP_200378.1 UniGene:At.6556 ProteinModelPortal:Q9FM71
SMR:Q9FM71 PRIDE:Q9FM71 EnsemblPlants:AT5G55670.1 GeneID:835661
KEGG:ath:AT5G55670 TAIR:At5g55670 HOGENOM:HOG000242877
InParanoid:Q9FM71 PhylomeDB:Q9FM71 ProtClustDB:CLSN2686996
ArrayExpress:Q9FM71 Genevestigator:Q9FM71 Uniprot:Q9FM71
Length = 710
Score = 111 (44.1 bits), Expect = 0.00038, P = 0.00038
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 79 SDRREEKRSIRHDHREKPRE-DHGRREDKRSRRHSDNNEFEARSRE-DHYRRDEKRPKRH 136
SDRR + R+ PRE D G D RRH D+ + R RE +H+ +D +R + H
Sbjct: 576 SDRRNREDKDAGYERDIPREKDVGHGYDMPERRHRDDRD-TGREREREHHHKDRERSREH 634
Query: 137 ESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
+ ++DR ++ G GD + RHR+
Sbjct: 635 VRDRERERERDRHREERERYG-GDHRT-RHRD 664
>FB|FBgn0031493 [details] [associations]
symbol:CG3605 species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS] [GO:0005686 "U2 snRNP"
evidence=ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR007180 Pfam:PF04037 EMBL:AE014134 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0005686 eggNOG:COG5182
GeneTree:ENSGT00390000006734 KO:K12829 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 OMA:KNERIGG EMBL:AY061487
RefSeq:NP_608739.1 UniGene:Dm.285 IntAct:Q9VQK7 MINT:MINT-761142
STRING:Q9VQK7 EnsemblMetazoa:FBtr0077669 GeneID:33514
KEGG:dme:Dmel_CG3605 UCSC:CG3605-RA FlyBase:FBgn0031493
InParanoid:Q9VQK7 OrthoDB:EOG40CFZ5 GenomeRNAi:33514 NextBio:783978
Uniprot:Q9VQK7
Length = 749
Score = 111 (44.1 bits), Expect = 0.00041, P = 0.00041
Identities = 38/143 (26%), Positives = 64/143 (44%)
Query: 23 KFSHNEQRAANTGGGPQDRSSR-WGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDR 81
+F+ + +GG QD G + E N S+S+ TG A E N + R
Sbjct: 79 EFTVDADSQGGSGGATQDGDEADVGEDSEEDADNQVNGSASQKTGKQSKA-ERNKKKKKR 137
Query: 82 REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD-EKRPKRHESES 140
+++ R IRH ++ + E+ + ++E +A ED + EK+ KR ES S
Sbjct: 138 KKQNRKIRHQIEFARQQQLAQAEENEPE--AKDSETKAHGSEDEQVAEKEKKDKRKESRS 195
Query: 141 YLREDQ-DRRGGDKSSTGRGDSS 162
R+D+ D + DK + D +
Sbjct: 196 KRRKDRSDEKDTDKKAGEANDEN 218
>FB|FBgn0033438 [details] [associations]
symbol:Mmp2 "Matrix metalloproteinase 2" species:7227
"Drosophila melanogaster" [GO:0004222 "metalloendopeptidase
activity" evidence=ISS;IDA;NAS] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=IEA] [GO:0030425 "dendrite" evidence=IMP] [GO:0034769
"basement membrane disassembly" evidence=IMP] [GO:0007561 "imaginal
disc eversion" evidence=IMP] [GO:0046529 "imaginal disc fusion,
thorax closure" evidence=IMP] [GO:0007426 "tracheal outgrowth, open
tracheal system" evidence=IMP] [GO:0071711 "basement membrane
organization" evidence=IMP] [GO:0035202 "tracheal pit formation in
open tracheal system" evidence=IMP] [GO:0007424 "open tracheal
system development" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] [GO:0040037 "negative regulation of fibroblast growth
factor receptor signaling pathway" evidence=IDA] [GO:0042060 "wound
healing" evidence=IMP] [GO:0002218 "activation of innate immune
response" evidence=IDA] InterPro:IPR001818 InterPro:IPR006026
InterPro:IPR021190 InterPro:IPR024079 Pfam:PF00413 PRINTS:PR00138
SMART:SM00235 InterPro:IPR002477 Pfam:PF01471 GO:GO:0005886
GO:GO:0046872 GO:GO:0030425 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 Gene3D:3.40.390.10 GO:GO:0046331 GO:GO:0031012
GO:GO:0002218 Gene3D:2.110.10.10 InterPro:IPR000585
InterPro:IPR018487 Pfam:PF00045 SMART:SM00120 SUPFAM:SSF50923
SUPFAM:SSF47090 GO:GO:0040037 GO:GO:0046529 GO:GO:0007561
GO:GO:0035202 GO:GO:0007426 GO:GO:0034769 eggNOG:NOG295915
ChiTaRS:MMP2 EMBL:BT021212 ProteinModelPortal:Q5BIL2 STRING:Q5BIL2
MEROPS:M10.036 PaxDb:Q5BIL2 PRIDE:Q5BIL2 FlyBase:FBgn0033438
InParanoid:Q5BIL2 Bgee:Q5BIL2 Uniprot:Q5BIL2
Length = 758
Score = 111 (44.1 bits), Expect = 0.00042, P = 0.00042
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 58 NDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPR--EDHGRREDKRSRRHSDNN 115
N ++ R R E + +RR ++ RH E+ R E+ R+E++R R+ +
Sbjct: 345 NPNNDRNRARERQEEERRRQEKERRRQEEERRHQEEERRRQVEERQRQEEERWRQEQERQ 404
Query: 116 EFEARSRE-DHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRG-DSSSHRHRER 169
E E R RE +H + E+ P + + R++ +RR ++ + R RER
Sbjct: 405 EEENRRREIEHKSQWERNPSKERNRPRERQEMERRRQEQERQEQERQEQEDRRRER 460
>RGD|1307981 [details] [associations]
symbol:Luc7l3 "LUC7-like 3 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003729 "mRNA binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005925 "focal adhesion" evidence=ISO]
[GO:0006915 "apoptotic process" evidence=ISO] [GO:0006950 "response
to stress" evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] RGD:1307981
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194 IPI:IPI00952314
Ensembl:ENSRNOT00000065737 ArrayExpress:D4A371 Uniprot:D4A371
Length = 477
Score = 109 (43.4 bits), Expect = 0.00043, P = 0.00043
Identities = 35/103 (33%), Positives = 49/103 (47%)
Query: 78 QSDRREEKRSIRHDHREKPR-EDHGRREDKRSR-RHSDNNEFEARSRE-DHYR---RDEK 131
+ + RE KR + REK R D RR+ RSR RHS SR DH R RD +
Sbjct: 264 EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRDRR 323
Query: 132 RPK---RHESESYLREDQDRRGG--DKSSTGRGDSSSHRHRER 169
R + R S S+ R ++ R D+ + D S++HR +
Sbjct: 324 RSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSK 366
>ZFIN|ZDB-GENE-110411-31 [details] [associations]
symbol:rbm27 "RNA binding motif protein 27"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR002483
InterPro:IPR012677 Pfam:PF00642 Pfam:PF01480 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00360 ZFIN:ZDB-GENE-110411-31 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 Gene3D:1.20.1390.10 GeneTree:ENSGT00510000046929
EMBL:CU468941 IPI:IPI01024434 Ensembl:ENSDART00000148928
ArrayExpress:F8W2E8 Bgee:F8W2E8 Uniprot:F8W2E8
Length = 1031
Score = 112 (44.5 bits), Expect = 0.00045, P = 0.00045
Identities = 41/91 (45%), Positives = 49/91 (53%)
Query: 83 EEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPK--RH--ES 138
EEK H E RE+ RR R+R SD NE +R+R+D R D KR + RH
Sbjct: 95 EEKEETAHV--EDDRENRRRRSPLRNR--SDFNE--SRARDDRRRDDRKRREVDRHLKSG 148
Query: 139 ESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
ESY R+ +RRGG SS GR S S R R R
Sbjct: 149 ESY-RDRHERRGG--SSRGRSYSRS-RSRSR 175
>WB|WBGene00021295 [details] [associations]
symbol:Y25C1A.8 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001876 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50199 SMART:SM00547 GO:GO:0008270
GO:GO:0005622 GeneTree:ENSGT00600000084415 InterPro:IPR017337
PIRSF:PIRSF037956 EMBL:FO080207 RefSeq:NP_494440.1
ProteinModelPortal:H2KYA0 SMR:H2KYA0 EnsemblMetazoa:Y25C1A.8a
GeneID:173655 KEGG:cel:CELE_Y25C1A.8 CTD:173655 WormBase:Y25C1A.8a
OMA:SGGECSC Uniprot:H2KYA0
Length = 345
Score = 107 (42.7 bits), Expect = 0.00046, P = 0.00046
Identities = 31/96 (32%), Positives = 42/96 (43%)
Query: 76 PNQSDRRE-EKRSIRHDHREKPREDHGRREDK-RSRRHSDNNEFEARSREDHYRRDEKRP 133
P D +E ++R + RE+ RE H +R + R R +RSRE YR D +
Sbjct: 243 PESEDEKEKDRRKMHKTSRERDRESHRKRSNSPRDRDRKRGKRSRSRSRERSYRDDRRDR 302
Query: 134 KRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
KR S R RG +S R D R +ER
Sbjct: 303 KRSRSRE--RRRSPPRG--TTSDRRRDDERRREKER 334
>UNIPROTKB|E1BC96 [details] [associations]
symbol:ZC3H18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00650000093061 EMBL:DAAA02046252 IPI:IPI00924196
Ensembl:ENSBTAT00000061317 ArrayExpress:E1BC96 Uniprot:E1BC96
Length = 938
Score = 89 (36.4 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 28/101 (27%), Positives = 44/101 (43%)
Query: 73 EGNPNQSDR-REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDE- 130
E P + R RE +R + RE+ RE RE +R +R + R +E R++E
Sbjct: 380 EAEPYHNYRERERERERENRQRERERERERDRERERRQRERERERERERDKERQRRKEEW 439
Query: 131 --KRPKRHESESYLRE-DQDRRGGDKSSTGRGDSSSHRHRE 168
+R KR E + R+ D++R + R R E
Sbjct: 440 ERERAKRDEKDRQHRDRDKEREKDKEKPKARSPQPPSRQAE 480
Score = 88 (36.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 90 HDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHE--SESYLREDQ 146
H++RE+ RE + R+ +R R + E E R RE R+ +R K + E + RE
Sbjct: 385 HNYRERERERERENRQRERERERERDRERERRQRERERERERERDKERQRRKEEWERERA 444
Query: 147 DRRGGDKSSTGRGDSSSHRHRER 169
R D+ R D + +E+
Sbjct: 445 KRDEKDRQHRDR-DKEREKDKEK 466
Score = 66 (28.3 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 5 RGVCRAFQRGECTRGDGCKFSH 26
R CR F +G CT G C+F H
Sbjct: 207 RPTCRFFMKGNCTWGMNCRFIH 228
>UNIPROTKB|F1NSZ3 [details] [associations]
symbol:LUC7L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=IEA]
[GO:0050733 "RS domain binding" evidence=IEA] GO:GO:0005634
GO:GO:0045843 InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 OMA:HESTNGK EMBL:AADN02049282
EMBL:AADN02049283 EMBL:AADN02049284 EMBL:AADN02049285
EMBL:AADN02049286 EMBL:AADN02049287 EMBL:AADN02049288
EMBL:AADN02049289 IPI:IPI00576001 Ensembl:ENSGALT00000012185
Uniprot:F1NSZ3
Length = 350
Score = 107 (42.7 bits), Expect = 0.00048, P = 0.00048
Identities = 31/90 (34%), Positives = 42/90 (46%)
Query: 82 REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEF-EARSRE-DHYRRDEKRPKRHESE 139
REE+ R R + R R+ +R R S + E ++RSR D +RR R + H S
Sbjct: 232 REERMGRRSGSRNRDRRRSRSRDRRRRRSRSASRERRKSRSRSRDRHRRHRSRSRSH-SR 290
Query: 140 SYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
+ R +DR KSS R R RER
Sbjct: 291 GHRRGSRDRSSKHKSSRDRSSREKSRDRER 320
>UNIPROTKB|E1C6U8 [details] [associations]
symbol:LUC7L3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0006915 GO:GO:0006950
GO:GO:0008380 GO:GO:0003729 GO:GO:0005925 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 GeneTree:ENSGT00700000104035
OMA:ISVPLWK EMBL:AADN02053609 IPI:IPI00820098
Ensembl:ENSGALT00000011942 ArrayExpress:E1C6U8 Uniprot:E1C6U8
Length = 434
Score = 108 (43.1 bits), Expect = 0.00050, P = 0.00050
Identities = 39/129 (30%), Positives = 57/129 (44%)
Query: 39 QDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDR-REEKRSIRHDHREKPR 97
++R R E+ E + R+ R + + + R R+ KRS + R K
Sbjct: 268 RERKRRREEEEKEKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRKMS 327
Query: 98 EDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR---HESESYLREDQDRRGGDKS 154
RR RSR H D +E + RSR RR + R ++ H S+S RE QDR+ +K
Sbjct: 328 RSRDRR---RSRSH-DRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRERE-QDRKSKEKE 382
Query: 155 STGRGDSSS 163
G D S
Sbjct: 383 KRGSDDKKS 391
>DICTYBASE|DDB_G0284245 [details] [associations]
symbol:DDB_G0284245 "CCHC-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000504 InterPro:IPR001878 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102 PROSITE:PS50158
SMART:SM00343 SMART:SM00360 dictyBase:DDB_G0284245 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
Gene3D:4.10.60.10 EMBL:AAFI02000064 ProtClustDB:CLSZ2846728
RefSeq:XP_638672.1 ProteinModelPortal:Q54PX3 PRIDE:Q54PX3
EnsemblProtists:DDB0233309 GeneID:8624501 KEGG:ddi:DDB_G0284245
eggNOG:KOG0106 InParanoid:Q54PX3 OMA:DDAINSE Uniprot:Q54PX3
Length = 365
Score = 107 (42.7 bits), Expect = 0.00051, P = 0.00051
Identities = 35/101 (34%), Positives = 48/101 (47%)
Query: 75 NPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPK 134
NP +R + R R++ R+D RR DKR R D + +RSR D+ RRD++
Sbjct: 110 NPYHRERSRSRSRDRSRDRDRRRDDR-RRSDKRRER--DRSRSRSRSR-DNRRRDDRDRS 165
Query: 135 RHESESYLRE-----DQDR-RGGDKSSTGRGDSSSHRHRER 169
R S R D+DR R D+S D S R R+R
Sbjct: 166 RDRSRDRDRSRDRSRDRDRSRDRDRSRDRSRDRSRERERDR 206
>MGI|MGI:1914171 [details] [associations]
symbol:Prpf38b "PRP38 pre-mRNA processing factor 38 (yeast)
domain containing B" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] MGI:MGI:1914171
Pfam:PF03371 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
EMBL:AL671894 GeneTree:ENSGT00700000104061 InterPro:IPR005037
PANTHER:PTHR23142 CTD:55119 eggNOG:NOG266713 HOGENOM:HOG000115682
KO:K12850 OrthoDB:EOG4NKBWJ OMA:SIEPESQ ChiTaRS:PRPF38B
EMBL:AK003895 EMBL:AK015938 EMBL:AK018126 EMBL:BC050900
EMBL:BC052077 IPI:IPI00320636 RefSeq:NP_080121.1 UniGene:Mm.51049
ProteinModelPortal:Q80SY5 STRING:Q80SY5 PhosphoSite:Q80SY5
PaxDb:Q80SY5 PRIDE:Q80SY5 Ensembl:ENSMUST00000029480 GeneID:66921
KEGG:mmu:66921 UCSC:uc008qzx.1 InParanoid:Q80SY5 NextBio:323021
Bgee:Q80SY5 Genevestigator:Q80SY5 Uniprot:Q80SY5
Length = 542
Score = 109 (43.4 bits), Expect = 0.00052, P = 0.00052
Identities = 49/168 (29%), Positives = 75/168 (44%)
Query: 3 EERGVCRAFQRGECTRGDGCKFSHNEQ-RAANTGGGPQDRSSRWGHEKFEGFSWGKNDSS 61
+ER R+ RG R + H + R+ + G +DR E G ++
Sbjct: 314 KERRRSRSIDRGLDRRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDK 373
Query: 62 SRATGSGRVALEGNPNQS-DRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEAR 120
R GS R E + +S +R +E+RS R D EK H +EDK RRH D+ +
Sbjct: 374 ER--GSDR---ERDRERSRERSKEQRS-RGDGEEKK---H--KEDKEDRRHRDDKK---E 419
Query: 121 SREDHYRRDEKRPKRHESESYLREDQDR-RGGDKSSTGRGDSSSHRHR 167
S++ H R R ++H S S + R R DKSS + +S ++
Sbjct: 420 SKKKH-SRSRSRERKHRSRSRNAGKRSRSRSKDKSSRHKNESKEKANK 466
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00055
Identities = 35/90 (38%), Positives = 46/90 (51%)
Query: 81 RREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESES 140
RR R RH R + R R +++R R S +N +RSRED RD R +RH+S S
Sbjct: 186 RRSRSREDRHSDRRRSRS---RDKERRRRSRSRDNRRRSRSRED---RDRDRDRRHKSSS 239
Query: 141 YLREDQDRRGGDKS-STGRGDSSSHRHRER 169
R+ +RR +S ST R D R R R
Sbjct: 240 S-RDHHERRRRSRSRSTERRD---RRDRSR 265
>UNIPROTKB|Q8WUQ7 [details] [associations]
symbol:CACTIN "Cactin" species:9606 "Homo sapiens"
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0034122 "negative regulation of
toll-like receptor signaling pathway" evidence=IDA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IDA] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IDA] [GO:0071347 "cellular response to interleukin-1"
evidence=IDA] [GO:0071356 "cellular response to tumor necrosis
factor" evidence=IDA] [GO:0032717 "negative regulation of
interleukin-8 production" evidence=IDA] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031665 "negative
regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IMP] [GO:0032688 "negative regulation of interferon-beta
production" evidence=IMP] [GO:0060339 "negative regulation of type
I interferon-mediated signaling pathway" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=IMP]
InterPro:IPR019134 Pfam:PF09732 SMART:SM01050 GO:GO:0007275
GO:GO:0045087 GO:GO:0071222 EMBL:CH471139 GO:GO:0032720
GO:GO:0032717 GO:GO:0032088 GO:GO:0071347 GO:GO:0071356
GO:GO:0000398 GO:GO:0071013 GO:GO:0001933 GO:GO:0034122
GO:GO:0032688 InterPro:IPR018816 Pfam:PF10312 CTD:58509
EMBL:AY917150 EMBL:AC005175 EMBL:AC005542 EMBL:AF155102
EMBL:BC004262 EMBL:BC019848 IPI:IPI00022225 IPI:IPI00736681
PIR:T02672 RefSeq:NP_001074012.1 RefSeq:NP_067054.1
UniGene:Hs.128425 ProteinModelPortal:Q8WUQ7 IntAct:Q8WUQ7
STRING:Q8WUQ7 PhosphoSite:Q8WUQ7 DMDM:91208260 PaxDb:Q8WUQ7
PRIDE:Q8WUQ7 DNASU:58509 Ensembl:ENST00000248420
Ensembl:ENST00000429344 GeneID:58509 KEGG:hsa:58509 UCSC:uc002lyh.3
GeneCards:GC19M003610 H-InvDB:HIX0014643 H-InvDB:HIX0027556
HGNC:HGNC:29938 HPA:HPA042504 HPA:HPA042548 neXtProt:NX_Q8WUQ7
PharmGKB:PA134932683 eggNOG:NOG290728 HOVERGEN:HBG079755
InParanoid:Q8WUQ7 OrthoDB:EOG45DWP4 GenomeRNAi:58509 NextBio:65027
ArrayExpress:Q8WUQ7 Bgee:Q8WUQ7 CleanEx:HS_C19orf29
Genevestigator:Q8WUQ7 GermOnline:ENSG00000105298 GO:GO:0031665
GO:GO:0060339 Uniprot:Q8WUQ7
Length = 758
Score = 110 (43.8 bits), Expect = 0.00056, P = 0.00056
Identities = 37/113 (32%), Positives = 49/113 (43%)
Query: 59 DSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPR-EDHGRREDKR-SRRHSDNNE 116
D+ SR+ +GR G QS RS H R + R ED GRR +R SR ++E
Sbjct: 4 DTRSRSRSAGR---RGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSE 60
Query: 117 FEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
E R R RPK H + + D G++ S RG + R R R
Sbjct: 61 EERWQRSGMRSRSPPRPKWHSRDGSSQSDS----GEEQS--RGQWARRRRRAR 107
>RGD|1306493 [details] [associations]
symbol:Wdr60 "WD repeat domain 60" species:10116 "Rattus
norvegicus" [GO:0005929 "cilium" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 RGD:1306493 Gene3D:2.130.10.10 SUPFAM:SSF50978
OrthoDB:EOG4B8JCW GeneTree:ENSGT00390000013743 IPI:IPI00368856
Ensembl:ENSRNOT00000006144 UCSC:RGD:1306493 Uniprot:D3ZYV1
Length = 1000
Score = 111 (44.1 bits), Expect = 0.00058, P = 0.00058
Identities = 44/169 (26%), Positives = 72/169 (42%)
Query: 14 GECTRGDGCKFSHNEQRAANTGGGPQDRSS----RWGHEKFEGFSWGKNDSSSRATGSGR 69
G+ D K H +Q A + +DR R E+ S +D R GR
Sbjct: 98 GKDREKDKLKERHRDQEAEKSHSRGKDREREKDRRVRKEELRQ-SMAYHDLLGRDV-RGR 155
Query: 70 VALEGNPNQSDR-REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNE-------FEARS 121
LE ++ + R E+R R + E+ ED RR +R ++ D+ E ++
Sbjct: 156 QMLEKVEKKASKLRMEERERRDEDSERVDEDRERRYRERKLQYGDSKENPLNYWLYKEDG 215
Query: 122 REDHYR-RDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
+ H + +D R ++H +S RE +DR +K S+ RHRE+
Sbjct: 216 EKKHRKVKDADRERKHREKSSTREKKDRHSKEKGSSLSDREIEDRHREK 264
>UNIPROTKB|F1LMQ9 [details] [associations]
symbol:Rbmx2 "RNA-binding motif protein, X-linked 2"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:1562693 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00600000084414
OMA:HRHKRAR IPI:IPI00361641 Ensembl:ENSRNOT00000048922
Uniprot:F1LMQ9
Length = 327
Score = 106 (42.4 bits), Expect = 0.00059, P = 0.00059
Identities = 37/141 (26%), Positives = 56/141 (39%)
Query: 16 CTRGDGCKFSHNEQRAANTGGGPQDRSSRWG-HEKFEGFSWGKNDSSSRATGSGRVALEG 74
C+R K + +EQ A P +R+ + E+ + S G D + G
Sbjct: 186 CSRSKTVKET-DEQSAKKHSSKPSERAQKSECRERKKSHS-GSPDGRTSCRGRAEEPEWE 243
Query: 75 NPNQSDRREEKRSIRHDHREKPRE-DHGRREDKRSRRHSDNNEFEA-RSREDHYRRDEKR 132
+ + E K S R + EK R+ D GR S RH ++E + RSR R R
Sbjct: 244 AKKEKHKHEHKPSSRREGEEKSRDKDRGRSSGTHSSRHHGHSEGRSHRSRSRSRSRSPDR 303
Query: 133 PKRHESESYLREDQDRRGGDK 153
RH+ Y E + D+
Sbjct: 304 SHRHKKHRYSHERESFHASDR 324
>RGD|1562693 [details] [associations]
symbol:Rbmx2 "RNA binding motif protein, X-linked 2"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1562693 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:COG0724 HOGENOM:HOG000174091 KO:K13107 CTD:51634
HOVERGEN:HBG056427 OrthoDB:EOG4FJ8B4 EMBL:BC158684 IPI:IPI00361641
RefSeq:NP_001107258.2 UniGene:Rn.67383 ProteinModelPortal:B0BN49
STRING:B0BN49 GeneID:367930 KEGG:rno:367930 UCSC:RGD:1562693
NextBio:691882 Genevestigator:B0BN49 Uniprot:B0BN49
Length = 328
Score = 106 (42.4 bits), Expect = 0.00060, P = 0.00060
Identities = 37/141 (26%), Positives = 56/141 (39%)
Query: 16 CTRGDGCKFSHNEQRAANTGGGPQDRSSRWG-HEKFEGFSWGKNDSSSRATGSGRVALEG 74
C+R K + +EQ A P +R+ + E+ + S G D + G
Sbjct: 187 CSRSKTVKET-DEQSAKKHSSKPSERAQKSECRERKKSHS-GSPDGRTSCRGRAEEPEWE 244
Query: 75 NPNQSDRREEKRSIRHDHREKPRE-DHGRREDKRSRRHSDNNEFEA-RSREDHYRRDEKR 132
+ + E K S R + EK R+ D GR S RH ++E + RSR R R
Sbjct: 245 AKKEKHKHEHKPSSRREGEEKSRDKDRGRSSGTHSSRHHGHSEGRSHRSRSRSRSRSPDR 304
Query: 133 PKRHESESYLREDQDRRGGDK 153
RH+ Y E + D+
Sbjct: 305 SHRHKKHRYSHERESFHASDR 325
>RGD|1561347 [details] [associations]
symbol:Srsf4 "serine/arginine-rich splicing factor 4"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1561347
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH473968
GeneTree:ENSGT00700000104103 KO:K12893 CTD:6429
RefSeq:NP_001102155.1 UniGene:Rn.63428 Ensembl:ENSRNOT00000013301
GeneID:362612 KEGG:rno:362612 OMA:KDRGETR NextBio:680578
Uniprot:G3V798
Length = 488
Score = 108 (43.1 bits), Expect = 0.00060, P = 0.00060
Identities = 39/139 (28%), Positives = 63/139 (45%)
Query: 25 SHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREE 84
SH+ R+ + + SR G K S K+ S SR+ GS + + +QS R +
Sbjct: 190 SHSRSRSRSRHS--RKSRSRSGSSKS---SHSKSRSRSRS-GSHSRSKSRSRSQSRSRSK 243
Query: 85 KRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLRE 144
K R ++ R DK + D+ E + ++ + + P RH+S+S R
Sbjct: 244 KEKSRSPSKDNKSRSRSRSPDKSRSKSKDHAEDKLQNNDSAGKAKSHSPSRHDSKSRSRS 303
Query: 145 DQDRRGGD--KSSTGRGDS 161
Q+RR + +SST RG S
Sbjct: 304 -QERRAEEERRSSTSRGHS 321
>UNIPROTKB|F1LSN0 [details] [associations]
symbol:Srsf4 "Protein Sfrs4" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0048025
IPI:IPI00951281 Ensembl:ENSRNOT00000064233 ArrayExpress:F1LSN0
Uniprot:F1LSN0
Length = 492
Score = 108 (43.1 bits), Expect = 0.00060, P = 0.00060
Identities = 39/139 (28%), Positives = 63/139 (45%)
Query: 25 SHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREE 84
SH+ R+ + + SR G K S K+ S SR+ GS + + +QS R +
Sbjct: 194 SHSRSRSRSRHS--RKSRSRSGSSKS---SHSKSRSRSRS-GSHSRSKSRSRSQSRSRSK 247
Query: 85 KRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLRE 144
K R ++ R DK + D+ E + ++ + + P RH+S+S R
Sbjct: 248 KEKSRSPSKDNKSRSRSRSPDKSRSKSKDHAEDKLQNNDSAGKAKSHSPSRHDSKSRSRS 307
Query: 145 DQDRRGGD--KSSTGRGDS 161
Q+RR + +SST RG S
Sbjct: 308 -QERRAEEERRSSTSRGHS 325
>ZFIN|ZDB-GENE-031112-4 [details] [associations]
symbol:stm "starmaker" species:7955 "Danio rerio"
[GO:0009590 "detection of gravity" evidence=IMP] [GO:0043049 "otic
placode formation" evidence=IEP] [GO:0005576 "extracellular region"
evidence=IEA] ZFIN:ZDB-GENE-031112-4 GO:GO:0005576 eggNOG:NOG12793
GO:GO:0043049 GeneTree:ENSGT00550000074777 GO:GO:0009590
EMBL:AY372242 EMBL:CT574549 EMBL:BC129155 IPI:IPI00482673
RefSeq:NP_942112.2 UniGene:Dr.79127 Ensembl:ENSDART00000105174
GeneID:386700 KEGG:dre:386700 CTD:20882 HOVERGEN:HBG095247
OMA:RPGDHSQ NextBio:20813980 Bgee:A2VD23 Uniprot:A2VD23
Length = 613
Score = 109 (43.4 bits), Expect = 0.00061, P = 0.00061
Identities = 42/161 (26%), Positives = 65/161 (40%)
Query: 20 DGCKFSHNEQR-AANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQ 78
DG +EQ+ + + D EK E DSS A
Sbjct: 284 DGSNSEADEQKESVESKDHDSDSQDSDSAEKKEKHDDKDQDSSDSADSKD----SDEDKD 339
Query: 79 SDRREEKRSIRHDHREK---PREDH-----GRR-EDK-RSRRHS-DNNEFEARSREDHYR 127
D E+K S H+H+EK +E+H G+ EDK +S H D +E + S+ D
Sbjct: 340 KDHSEQKDSEDHEHKEKHTKDKEEHKDSDEGKDDEDKSKSDEHDKDESESKEASKSDESE 399
Query: 128 RDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
++EK+ + +S++ R+ D S DS S H +
Sbjct: 400 QEEKKDDKSDSDNSSRDSHSDSDSDSHSDSDSDSHSDSHSD 440
>TAIR|locus:2024852 [details] [associations]
symbol:CYP59 "cyclophilin 59" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003755
"peptidyl-prolyl cis-trans isomerase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=RCA]
InterPro:IPR000504 InterPro:IPR001878 InterPro:IPR002130
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS50072 PROSITE:PS50102 PROSITE:PS50158
SMART:SM00343 SMART:SM00360 EMBL:CP002684 GO:GO:0005829
GO:GO:0005634 GO:GO:0006457 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0652
GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413 KO:K12735 OMA:DRTQNRS
HSSP:Q27450 EMBL:AY568526 IPI:IPI00547571 RefSeq:NP_175776.2
UniGene:At.37348 SMR:Q6Q151 IntAct:Q6Q151 STRING:Q6Q151
EnsemblPlants:AT1G53720.1 GeneID:841810 KEGG:ath:AT1G53720
TAIR:At1g53720 InParanoid:Q6Q151 ProtClustDB:CLSN2690463
Genevestigator:Q6Q151 Uniprot:Q6Q151
Length = 506
Score = 108 (43.1 bits), Expect = 0.00063, P = 0.00063
Identities = 49/160 (30%), Positives = 69/160 (43%)
Query: 15 ECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEK-FEG--FSWGKNDSSSRATGSGRVA 71
+C G KF +Q + GGG G+E FEG K++S R S ++
Sbjct: 354 DCVGGPSSKFIVKDQNRQH-GGGE-------GYEMVFEGDVHETPKHNSHERER-SEKIQ 404
Query: 72 LEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRS--RRHSDNNEFEARSREDHYRRD 129
+P+ + E KR R D R+ R H R ED R R+H + E E+R ED RR
Sbjct: 405 RR-SPHGNG--EGKRQHR-DERDDGRRQHDR-EDARELERKHRERKERESREDEDRRRR- 458
Query: 130 EKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRH-RE 168
+R + + ES D+D + R RH RE
Sbjct: 459 RRREESRDKESRRERDEDDHRSHRDYKERRRERDDRHGRE 498
>MGI|MGI:1923264 [details] [associations]
symbol:Zc3h18 "zinc finger CCCH-type containing 18"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000571 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1923264
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00650000093061 CTD:124245 eggNOG:NOG74292
HOGENOM:HOG000155765 KO:K13092 OrthoDB:EOG46T31J HOVERGEN:HBG103346
EMBL:AK017933 EMBL:AK166802 EMBL:BC030495 EMBL:BC094330
EMBL:AK131189 IPI:IPI00454026 IPI:IPI00648513 RefSeq:NP_001025164.1
RefSeq:NP_001025165.1 UniGene:Mm.241489 ProteinModelPortal:Q0P678
SMR:Q0P678 IntAct:Q0P678 PhosphoSite:Q0P678 PaxDb:Q0P678
PRIDE:Q0P678 Ensembl:ENSMUST00000093073 GeneID:76014 KEGG:mmu:76014
UCSC:uc009nsl.1 UCSC:uc009nsm.1 NextBio:344435 Bgee:Q0P678
CleanEx:MM_ZC3H18 Genevestigator:Q0P678 Uniprot:Q0P678
Length = 948
Score = 88 (36.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 90 HDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHE--SESYLREDQ 146
H++RE+ RE + R+ +R R + E E R RE R+ +R K + E + RE
Sbjct: 395 HNYRERERERERENRQRERERERERDRERERRQRERERERERERDKERQRRKEEWERERA 454
Query: 147 DRRGGDKSSTGRGDSSSHRHRER 169
R D+ R D R +++
Sbjct: 455 KRDEKDRQHRDR-DRDKDREKDK 476
Score = 88 (36.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 28/87 (32%), Positives = 43/87 (49%)
Query: 73 EGNPNQSDR-REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDE- 130
E P + R RE +R + RE+ RE RE +R +R + R +E R++E
Sbjct: 390 EAEPYHNYRERERERERENRQRERERERERDRERERRQRERERERERERDKERQRRKEEW 449
Query: 131 --KRPKRHESESYLRE-DQDR-RGGDK 153
+R KR E + R+ D+D+ R DK
Sbjct: 450 ERERAKRDEKDRQHRDRDRDKDREKDK 476
Score = 66 (28.3 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 5 RGVCRAFQRGECTRGDGCKFSH 26
R CR F +G CT G C+F H
Sbjct: 217 RPTCRFFMKGNCTWGMSCRFIH 238
>DICTYBASE|DDB_G0289719 [details] [associations]
symbol:DDB_G0289719 "SFRS2-interacting protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0289719 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 EMBL:AAFI02000148 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 RefSeq:XP_636078.1
ProteinModelPortal:Q54H40 EnsemblProtists:DDB0188541 GeneID:8627288
KEGG:ddi:DDB_G0289719 eggNOG:KOG4430 InParanoid:Q54H40 OMA:ERESEHA
Uniprot:Q54H40
Length = 1419
Score = 112 (44.5 bits), Expect = 0.00065, P = 0.00065
Identities = 19/93 (20%), Positives = 47/93 (50%)
Query: 77 NQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRH 136
N+ R++K +EK +D +E+K + +N E E + +E+ R++++R ++
Sbjct: 708 NEEKERKQKEKDEKKRKEKEEKDRKEKEEKEEKERKENEENERKEKEEKKRKEKERKEKE 767
Query: 137 ESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
E E +E+++ + ++ + + +ER
Sbjct: 768 EKERKEKEEKEIKEKEEKKRKEKEEKDRKEKER 800
>TAIR|locus:2101714 [details] [associations]
symbol:U1-70K "AT3G50670" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IDA;RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0030422 "production of siRNA
involved in RNA interference" evidence=RCA] [GO:0035196 "production
of miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0030529 EMBL:AL132979 GO:GO:0000398
eggNOG:COG0724 EMBL:M93439 EMBL:U52909 EMBL:U52910 EMBL:AY039874
EMBL:AY094003 IPI:IPI00517859 IPI:IPI00520131 PIR:S71367
RefSeq:NP_190636.1 RefSeq:NP_850676.1 UniGene:At.25571
ProteinModelPortal:Q42404 SMR:Q42404 IntAct:Q42404 STRING:Q42404
PaxDb:Q42404 PRIDE:Q42404 EnsemblPlants:AT3G50670.1 GeneID:824230
KEGG:ath:AT3G50670 GeneFarm:4534 TAIR:At3g50670
HOGENOM:HOG000236289 InParanoid:Q42404 KO:K11093 OMA:KKSRGYL
PhylomeDB:Q42404 ProtClustDB:CLSN2918318 Genevestigator:Q42404
GermOnline:AT3G50670 InterPro:IPR022023 Pfam:PF12220 Uniprot:Q42404
Length = 427
Score = 107 (42.7 bits), Expect = 0.00066, P = 0.00066
Identities = 38/116 (32%), Positives = 49/116 (42%)
Query: 61 SSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEA- 119
+SR G + E P + E+ S + REK RE RE R H E
Sbjct: 233 TSRVGGGEEIVGEQQPQGRTSQSEEPSRPREEREKSREKGKERERSRELSHEQPRERSRD 292
Query: 120 RSREDHYRRDEKRPKRHESESYLREDQDR---RGG-DKSSTGRG-DSSSHRH-RER 169
R RED + RD + R R D+DR RG D+ RG D +S H R+R
Sbjct: 293 RPREDKHHRDRDQGGRDRDRDS-RRDRDRTRDRGDRDRRDRDRGRDRTSRDHDRDR 347
>CGD|CAL0000983 [details] [associations]
symbol:orf19.4332 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AACQ01000021 RefSeq:XP_720763.1 GeneID:3637581
KEGG:cal:CaO19.11806 CGD:CAL0062632 Uniprot:Q5AGI7
Length = 1486
Score = 112 (44.5 bits), Expect = 0.00068, P = 0.00068
Identities = 41/168 (24%), Positives = 67/168 (39%)
Query: 17 TRGDGC-KFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSS-SRATGSGRVALEG 74
T + C +F++ + A N G G + G F G N S +R G + E
Sbjct: 603 TEEEECDEFNNGKGNAGNGGKGGKGGKGGKGDRGSTKFKRGANHSDGNRHDGHHKGNKED 662
Query: 75 NP---------NQSDRREEKRSI----RHDHREKPREDHGRREDKRSRRHSDNNEFEARS 121
N + SD EK + + DH K +EDH +++ + H E E +
Sbjct: 663 NHRDSDYECGYSSSDDEHEKPKVIDKKKQDHERKKQEDHDKKKQE-DHEHEKQKEHERKK 721
Query: 122 REDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
+EDH R EK HE E +E + + +K + + +E+
Sbjct: 722 QEDHER--EKEDHEHEKE---KEHEKEKEHEKEKEHEKEKEHEKEKEK 764
>UNIPROTKB|Q5AGI7 [details] [associations]
symbol:CaO19.11806 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AACQ01000021 RefSeq:XP_720763.1 GeneID:3637581
KEGG:cal:CaO19.11806 CGD:CAL0062632 Uniprot:Q5AGI7
Length = 1486
Score = 112 (44.5 bits), Expect = 0.00068, P = 0.00068
Identities = 41/168 (24%), Positives = 67/168 (39%)
Query: 17 TRGDGC-KFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSS-SRATGSGRVALEG 74
T + C +F++ + A N G G + G F G N S +R G + E
Sbjct: 603 TEEEECDEFNNGKGNAGNGGKGGKGGKGGKGDRGSTKFKRGANHSDGNRHDGHHKGNKED 662
Query: 75 NP---------NQSDRREEKRSI----RHDHREKPREDHGRREDKRSRRHSDNNEFEARS 121
N + SD EK + + DH K +EDH +++ + H E E +
Sbjct: 663 NHRDSDYECGYSSSDDEHEKPKVIDKKKQDHERKKQEDHDKKKQE-DHEHEKQKEHERKK 721
Query: 122 REDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
+EDH R EK HE E +E + + +K + + +E+
Sbjct: 722 QEDHER--EKEDHEHEKE---KEHEKEKEHEKEKEHEKEKEHEKEKEK 764
>WB|WBGene00015207 [details] [associations]
symbol:B0495.8 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 EMBL:FO080132 eggNOG:COG5200
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 OMA:HESTNGK PIR:E88216
RefSeq:NP_741025.1 ProteinModelPortal:Q09217 PaxDb:Q09217
PRIDE:Q09217 EnsemblMetazoa:B0495.8a.1 EnsemblMetazoa:B0495.8a.2
GeneID:174246 KEGG:cel:CELE_B0495.8 UCSC:B0495.8a CTD:174246
WormBase:B0495.8a HOGENOM:HOG000019877 InParanoid:Q09217
NextBio:883201 ArrayExpress:Q09217 Uniprot:Q09217
Length = 313
Score = 99 (39.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 82 REEKRSIRHDHREKPREDHGRRE---DK---RSRRHSDN-NEFEARSREDHYRRDEKRPK 134
REEK + ++ RE +GRR+ D+ R R D N +RSR+ YRRD++ +
Sbjct: 240 REEKLGSQRGYQR--RESYGRRDRGGDRGEYRGDRDRDRRNRDRSRSRDRSYRRDDRGDR 297
Query: 135 RHESESYLREDQDRR 149
R++ ++ R D+DRR
Sbjct: 298 RYDRDNRDRRDRDRR 312
Score = 39 (18.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 3 EERGVCRAFQRGEC 16
+ VCRAF G C
Sbjct: 29 DHHSVCRAFLLGVC 42
>UNIPROTKB|F1RK00 [details] [associations]
symbol:ZC3H13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00700000104144 OMA:RSNRSHT
EMBL:CU367850 Ensembl:ENSSSCT00000010315 Uniprot:F1RK00
Length = 1544
Score = 112 (44.5 bits), Expect = 0.00071, P = 0.00071
Identities = 42/172 (24%), Positives = 69/172 (40%)
Query: 1 MREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQ--DRSSRWGH-EKFEGFSWGK 57
+REE R R + +R + N++ + G GP+ ++ SR + + S
Sbjct: 535 LREESS--RTEVRND-SRNESRSEMRNDRMGRSRGRGPELPEKGSRGTRGSQIDSHSSSS 591
Query: 58 NDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEF 117
N S T S + P + + RE+ R + R RE R D R R ++
Sbjct: 592 NYHDSWETRSSYPERDRYPER-ENREQARDSSFERRHGERE----RRDNRERDQRPSSPI 646
Query: 118 EARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
+ R D RDE+R +R + R D+ R D+ + R R+R
Sbjct: 647 RHQGRNDELERDERREERRVDRAEDRRDERARERDRERDRERERERERERDR 698
>DICTYBASE|DDB_G0271338 [details] [associations]
symbol:taf7 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISS] [GO:0005669
"transcription factor TFIID complex" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006413 "translational initiation"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR006751 Pfam:PF04658
dictyBase:DDB_G0271338 GenomeReviews:CM000151_GR EMBL:AAFI02000006
GO:GO:0003743 GO:GO:0006367 GO:GO:0005669 eggNOG:COG5414
RefSeq:XP_645636.1 EnsemblProtists:DDB0230994 GeneID:8617828
KEGG:ddi:DDB_G0271338 InParanoid:Q55BH6 OMA:SPRSHEE Uniprot:Q55BH6
Length = 698
Score = 109 (43.4 bits), Expect = 0.00072, P = 0.00072
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 75 NPNQSDRREEKRSIRHDHREKPREDHGRRE--DKRSRRHSDNNEFEARSREDHYRRDEKR 132
+P + R++ RS R +HR++ D G RE D+ R H D + E R E +R +KR
Sbjct: 555 SPRSHEERKKHRSERREHRDREHRDRGDREHRDRGDREHRDRGDREGRDGE--HREHKKR 612
Query: 133 PKRHESESYLREDQDR 148
R E + D+DR
Sbjct: 613 --RREHREHRDRDRDR 626
>DICTYBASE|DDB_G0291966 [details] [associations]
symbol:DDB_G0291966 "CCHC-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000504 InterPro:IPR001878
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102
PROSITE:PS50158 SMART:SM00343 SMART:SM00360 dictyBase:DDB_G0291966
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000186 Gene3D:4.10.60.10 OMA:SKISVEW
eggNOG:NOG77895 RefSeq:XP_001134500.1 ProteinModelPortal:Q1ZXB1
EnsemblProtists:DDB0233327 GeneID:8628419 KEGG:ddi:DDB_G0291966
InParanoid:Q1ZXB1 ProtClustDB:CLSZ2846728 Uniprot:Q1ZXB1
Length = 312
Score = 105 (42.0 bits), Expect = 0.00073, P = 0.00073
Identities = 40/145 (27%), Positives = 59/145 (40%)
Query: 39 QDRSSRWGHEKFEGFSWGKNDSS---SRATGSGRV---ALEGNPNQSDRREEKRSIRHDH 92
+DR SR ++ SW + D S SR R + + + DRR+ R D
Sbjct: 116 RDRRSR----RYRSPSWDRRDRSRDRSRDRSRDRSRDRSRDRRDRRRDRRDRSRDRSRDG 171
Query: 93 REKPREDHGRREDKRSRRHSDNNEFEARSRE-DHYR------RDEKRPKRHESESYLRED 145
R + D R + +RR+ D + +R R D R RD R +R + D
Sbjct: 172 RRERSRDRSRDRSRDARRNRDTSRDRSRDRSRDRSRDGGNIIRDTSRDRRRNNSRDRSRD 231
Query: 146 QDR-RGGDKSSTGRGDSSSHRHRER 169
+ R GG + R D S R R+R
Sbjct: 232 RSRSNGGGSRYSSRRDRSRDRSRDR 256
>TAIR|locus:2046273 [details] [associations]
symbol:AT2G18540 "AT2G18540" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0045735
"nutrient reservoir activity" evidence=IEA] InterPro:IPR006045
Pfam:PF00190 SMART:SM00835 GO:GO:0045735 Gene3D:2.60.120.10
InterPro:IPR014710 InterPro:IPR011051 SUPFAM:SSF51182 EMBL:CP002685
IPI:IPI00526783 RefSeq:NP_179444.2 UniGene:At.52809
ProteinModelPortal:F4IQK5 SMR:F4IQK5 PRIDE:F4IQK5
EnsemblPlants:AT2G18540.1 GeneID:816369 KEGG:ath:AT2G18540
OMA:HADMVFY Uniprot:F4IQK5
Length = 707
Score = 109 (43.4 bits), Expect = 0.00073, P = 0.00073
Identities = 24/93 (25%), Positives = 50/93 (53%)
Query: 78 QSDRREEKRSIRHDHRE--KPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 135
++ RREE+R R + E + RE+ +E++ +++ + + + R + RR+E+ KR
Sbjct: 498 EAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKR 557
Query: 136 HESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 168
E E+ RE++ +R ++ + R + RE
Sbjct: 558 REEEARKREEERKRE-EEMAKRREQERQRKERE 589
Score = 109 (43.4 bits), Expect = 0.00073, P = 0.00073
Identities = 35/161 (21%), Positives = 69/161 (42%)
Query: 11 FQRGECTRGDGCKFSHN-EQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGR 69
F+ C G+ K E+R ++ R E+ E + ++ R +
Sbjct: 415 FECASCAEGELSKLMREIEERKRRE----EEEIERRRKEEEEARK--REEAKRREEEEAK 468
Query: 70 VALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD 129
E + R EE+ R + R++ E+ RRE++R +R + + AR RE+ ++
Sbjct: 469 RREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQ--ARKREEEREKE 526
Query: 130 EKRPKRHESESYL--REDQDRRGGDKSSTGRGDSSSHRHRE 168
E+ K+ E E RE+ +R+ ++ R + + + E
Sbjct: 527 EEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREE 567
Score = 108 (43.1 bits), Expect = 0.00098, P = 0.00098
Identities = 38/146 (26%), Positives = 62/146 (42%)
Query: 28 EQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRS 87
E+R Q R EK E + + + R + RREE+
Sbjct: 504 EERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEAR 563
Query: 88 IRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYR-RDEKRPKRHESESYL--RE 144
R + R++ E RRE +R R+ + E E + RE+ R R+E+ KR E E RE
Sbjct: 564 KREEERKREEEMAKRREQERQRK--EREEVERKIREEQERKREEEMAKRREQERQKKERE 621
Query: 145 DQDRRGGDKSSTGRGDSSSH-RHRER 169
+ +R+ ++ + R + + R ER
Sbjct: 622 EMERKKREEEARKREEEMAKIREEER 647
>UNIPROTKB|Q15695 [details] [associations]
symbol:ZRSR1 "U2 small nuclear ribonucleoprotein auxiliary
factor 35 kDa subunit-related protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0030529 eggNOG:NOG304335 PANTHER:PTHR12620 UniGene:Hs.637001
HOVERGEN:HBG054605 EMBL:D49676 EMBL:U51224 EMBL:AK313576
IPI:IPI00018952 ProteinModelPortal:Q15695 SMR:Q15695 STRING:Q15695
PhosphoSite:Q15695 DMDM:2833265 PaxDb:Q15695 PRIDE:Q15695
Ensembl:ENST00000391338 UCSC:uc021ycm.1 GeneCards:GC05P112228
HGNC:HGNC:12456 HPA:HPA047500 MIM:601079 neXtProt:NX_Q15695
PharmGKB:PA37106 HOGENOM:HOG000049279 InParanoid:Q15695 OMA:HSSKSHE
OrthoDB:EOG4CNQRM PhylomeDB:Q15695 Genevestigator:Q15695
GermOnline:ENSG00000174044 Uniprot:Q15695
Length = 479
Score = 107 (42.7 bits), Expect = 0.00078, P = 0.00078
Identities = 50/169 (29%), Positives = 69/169 (40%)
Query: 2 REERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSS 61
R + +C F+ +C RG C F H R N +R ++ G S+GKN S
Sbjct: 311 RWKMAICGLFEIQQCPRGKHCNFLH-VFRNPNNEFWEANRDIYLSSDQ-TGSSFGKN--S 366
Query: 62 SRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARS 121
R G + + R+ +R+ DH K R R+ K S R +++ ++S
Sbjct: 367 ERREKMGH-----HDHYYSRQRGRRNPSPDHTYK-RNGESERK-KSSHRGKKSHKRTSKS 419
Query: 122 REDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSH-RHRER 169
RE H R RH S R Q RR S R SSS R R R
Sbjct: 420 RERHNSPSRGR-NRHRSWDQGRRSQSRR----SHRSRSQSSSRCRSRGR 463
>MGI|MGI:2445085 [details] [associations]
symbol:Wdr60 "WD repeat domain 60" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005929
"cilium" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2445085 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005929 CTD:55112 eggNOG:NOG325464 HOGENOM:HOG000154850
HOVERGEN:HBG094160 OMA:VQCNEDN OrthoDB:EOG4B8JCW EMBL:AK052482
EMBL:AK144138 IPI:IPI00226499 RefSeq:NP_666151.3 UniGene:Mm.31382
ProteinModelPortal:Q8C761 SMR:Q8C761 PhosphoSite:Q8C761
PaxDb:Q8C761 PRIDE:Q8C761 Ensembl:ENSMUST00000039349 GeneID:217935
KEGG:mmu:217935 UCSC:uc007phj.1 GeneTree:ENSGT00390000013743
InParanoid:Q8C761 NextBio:376106 Bgee:Q8C761 CleanEx:MM_WDR60
Genevestigator:Q8C761 GermOnline:ENSMUSG00000042050 Uniprot:Q8C761
Length = 999
Score = 110 (43.8 bits), Expect = 0.00079, P = 0.00079
Identities = 43/161 (26%), Positives = 71/161 (44%)
Query: 20 DGCKFSHNEQRA--ANTGGGPQDRSSRWGHEKFE-GFSWGKNDSSSRATGSGRVALEGNP 76
D K H +Q A A++ G ++R K E S +D SR ++A +
Sbjct: 103 DKLKERHRDQEAEKAHSRGKDREREKDRRARKEEIRQSMAYHDLLSRDMRGRQMAEKVEK 162
Query: 77 NQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNE-------FEARSREDHYR-R 128
S R E+R R + E+ ED RR +R ++ D+ E ++ + H + +
Sbjct: 163 KASKIRTEERERRDEDSERIDEDRERRYRERKLQYGDSKEHPLSYWLYKEDGEKKHRKAK 222
Query: 129 DEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
D R KR +S +RE ++R +K S+ RHRE+
Sbjct: 223 DADREKRLREKSSMREKRERHAREKGSSLSDREVEDRHREK 263
>UNIPROTKB|A7MB38 [details] [associations]
symbol:SFRS4 "SFRS4 protein" species:9913 "Bos taurus"
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0048025
eggNOG:COG0724 HOVERGEN:HBG002295 GeneTree:ENSGT00700000104103
HOGENOM:HOG000276234 KO:K12893 CTD:6429 OMA:REHAKSE
OrthoDB:EOG41C6X9 EMBL:DAAA02006322 EMBL:BC151318 IPI:IPI00692721
RefSeq:NP_001094701.1 UniGene:Bt.28464 STRING:A7MB38
Ensembl:ENSBTAT00000037984 GeneID:614310 KEGG:bta:614310
InParanoid:A7MB38 NextBio:20899050 Uniprot:A7MB38
Length = 493
Score = 107 (42.7 bits), Expect = 0.00081, P = 0.00081
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 25 SHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREE 84
SH+ R+ + + SR G K S K+ S SR+ GS + + +QS R +
Sbjct: 190 SHSRSRSRSRHS--RKSRSRSGSSKS---SHSKSRSRSRS-GSRSRSKSRSRSQSRSRSK 243
Query: 85 KRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLRE 144
K R ++K R R DKR + D E + ++ + + + P RH+S+S R
Sbjct: 244 KEKSRSPSKDKSRS-RSRSADKRRSKSKDPAEEKVQNSDRTGKSKSRSPSRHKSKSRSRS 302
Query: 145 DQDRRGGDKSSTGRGDSSSHRHRER 169
+ RG +++ RG +S R +E+
Sbjct: 303 QE--RGAEEA---RGSASRSRSKEK 322
>MGI|MGI:95301 [details] [associations]
symbol:Eif3a "eukaryotic translation initiation factor 3,
subunit A" species:10090 "Mus musculus" [GO:0001732 "formation of
translation initiation complex" evidence=ISO;IDA] [GO:0003743
"translation initiation factor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISO;IDA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 MGI:MGI:95301
GO:GO:0005730 GO:GO:0005815 GO:GO:0003743 GO:GO:0005852
eggNOG:NOG236708 HOGENOM:HOG000246822 KO:K03254 OMA:QDRDEND
HAMAP:MF_03000 GeneTree:ENSGT00690000102108 HOVERGEN:HBG006128
GO:GO:0001732 CTD:8661 OrthoDB:EOG4B2SWM ChiTaRS:EIF3A EMBL:U14172
EMBL:AC163019 EMBL:X84651 EMBL:X17373 IPI:IPI00129276 PIR:S13800
PIR:T42637 RefSeq:NP_034253.3 UniGene:Mm.2238 UniGene:Mm.482533
ProteinModelPortal:P23116 IntAct:P23116 MINT:MINT-1860578
STRING:P23116 PhosphoSite:P23116 PaxDb:P23116 PRIDE:P23116
Ensembl:ENSMUST00000025955 GeneID:13669 KEGG:mmu:13669
UCSC:uc008ibx.1 InParanoid:P23116 NextBio:284428 Bgee:P23116
Genevestigator:P23116 GermOnline:ENSMUSG00000024991 Uniprot:P23116
Length = 1344
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 42/146 (28%), Positives = 65/146 (44%)
Query: 28 EQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPN-QSDRREEKR 86
+++A GP R SR E+ W ++ R E + + + DR E+
Sbjct: 1142 KEKAREESWGPP-RESRPSEER----EWDRDKEKDRDNQDRE---ENDKDLERDRDRERD 1193
Query: 87 SIRHDHREKPREDHGRREDKRSRRHS--DNNEFEARSREDHYR-RDEKRPKRH-ESESYL 142
R D +PR++ G R S D++ + R RED R RD++R R L
Sbjct: 1194 GDREDRFRRPRDEGGWRRGPAEESSSWRDSSRRDDRDREDRRRDRDDRRDLRDLRDRRDL 1253
Query: 143 REDQDRRGGDKSSTGRGDSSSHRHRE 168
R+D+DRRG S R ++SS R +
Sbjct: 1254 RDDRDRRGPPLRSE-REEASSWRRTD 1278
>ZFIN|ZDB-GENE-040426-2457 [details] [associations]
symbol:rsrc2 "arginine/serine-rich coiled-coil 2"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040426-2457 GeneTree:ENSGT00700000104061
EMBL:BC067581 EMBL:BX957226 IPI:IPI00513163 RefSeq:NP_998445.1
UniGene:Dr.32248 Ensembl:ENSDART00000062366 GeneID:406566
KEGG:dre:406566 CTD:65117 eggNOG:NOG69458 HOGENOM:HOG000154211
HOVERGEN:HBG061992 InParanoid:Q6NWI1 NextBio:20818126
ArrayExpress:Q6NWI1 Bgee:Q6NWI1 InterPro:IPR026760
PANTHER:PTHR32105 Uniprot:Q6NWI1
Length = 407
Score = 106 (42.4 bits), Expect = 0.00085, P = 0.00085
Identities = 38/156 (24%), Positives = 70/156 (44%)
Query: 14 GECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALE 73
G+ G+ K S + + + + +R + G ++ + S ++ +R S + AL+
Sbjct: 14 GKSQPGENRKASRSSKHCSRSRSRSTERKRKSGDKRHKR-SHSRS-KEARKKDSEK-ALK 70
Query: 74 GNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRP 133
+R E R D + E+ RR+DK++ R ++ ++ + H R +KR
Sbjct: 71 CQSGSEERLEFSDKGR-DRLSEDTEERHRRKDKKTSRPRSHSRSRSKEKRHHNRNWDKRR 129
Query: 134 KRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
R S S D+ RR +S++ S HRHR R
Sbjct: 130 SRSRSRS---RDKKRRARSRSNS----RSKHRHRSR 158
>WB|WBGene00017988 [details] [associations]
symbol:fipp-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 EMBL:FO081012 eggNOG:COG5213 KO:K14405
InterPro:IPR007854 Pfam:PF05182 GeneTree:ENSGT00690000102147
PIR:T03916 RefSeq:NP_504203.1 ProteinModelPortal:O16293
IntAct:O16293 STRING:O16293 PaxDb:O16293 EnsemblMetazoa:F32D1.9.1
EnsemblMetazoa:F32D1.9.2 GeneID:178835 KEGG:cel:CELE_F32D1.9
UCSC:F32D1.9.1 CTD:178835 WormBase:F32D1.9 InParanoid:O16293
OMA:DQWLYGD NextBio:902752 Uniprot:O16293
Length = 513
Score = 107 (42.7 bits), Expect = 0.00086, P = 0.00086
Identities = 41/122 (33%), Positives = 63/122 (51%)
Query: 66 GSGR---VALEGNPNQSDRREEKRSIRHDHREKPRE--DH-----GRREDKR--SRRH-S 112
GSG V+ + +S RR+ RS R HR++ R+ D G RE R SRRH S
Sbjct: 378 GSGAFSTVSDDDEERRSSRRKRSRS-RSPHRDRDRDRRDRETRRRGERESDRTSSRRHRS 436
Query: 113 DNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDK--SSTGRGD----SSSHRH 166
+ + R + D R+++R +R + E R+ + RRG ++ SS+GR + SS RH
Sbjct: 437 RSASGDRRRKRDDREREKRRERRGDDED--RKKRSRRGDEEEESSSGRKERKEKSSRSRH 494
Query: 167 RE 168
+
Sbjct: 495 ED 496
>UNIPROTKB|E1BV70 [details] [associations]
symbol:LOC769405 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001711 "endodermal cell fate commitment"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006378
"mRNA polyadenylation" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0031442 "positive regulation of mRNA 3'-end processing"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0033523 "histone H2B ubiquitination" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] GO:GO:0005730 GO:GO:0045944
GO:GO:0006378 GeneTree:ENSGT00550000074952 KO:K15177
InterPro:IPR007149 Pfam:PF04004 GO:GO:0032968 GO:GO:0033523
GO:GO:0010390 GO:GO:0031442 GO:GO:0016593 GO:GO:0045638 OMA:NNGTMDL
EMBL:AADN02045369 EMBL:AADN02045370 IPI:IPI00586576
RefSeq:XP_001232678.2 Ensembl:ENSGALT00000007481 GeneID:769405
KEGG:gga:769405 Uniprot:E1BV70
Length = 657
Score = 108 (43.1 bits), Expect = 0.00089, P = 0.00089
Identities = 35/121 (28%), Positives = 48/121 (39%)
Query: 54 SWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSD 113
S +DS GSG A + Q D RE + + ED G S HS+
Sbjct: 23 SGSDSDSDQENAGSGSNASGSDSEQDDEREAAKPSNKELFGDDSEDEGASHHTGSDNHSE 82
Query: 114 N--NEFEARSREDHYRRDEKRPKRHE-SESYLREDQDRRG--GDKSST-GRGDSSSHRHR 167
N EA +H D+ +H SE+ +++D RG D+ S GD S H
Sbjct: 83 RSYNRSEASGHSEHEDNDQSDVDQHSASEAAHDDEEDERGHGSDEGSHHSEGDGSEKAHS 142
Query: 168 E 168
E
Sbjct: 143 E 143
>DICTYBASE|DDB_G0283697 [details] [associations]
symbol:DDB_G0283697 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0283697 EMBL:AAFI02000056 RefSeq:XP_638971.1
HSSP:Q9BYW2 ProteinModelPortal:Q54QQ2 EnsemblProtists:DDB0237901
GeneID:8624217 KEGG:ddi:DDB_G0283697 OMA:PPKENFF Uniprot:Q54QQ2
Length = 853
Score = 109 (43.4 bits), Expect = 0.00092, P = 0.00092
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 73 EGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEF-EARSREDHYRRDEK 131
+G+ ++ + E +R D+ ++ RE R D+ SR +S ++ + R R+ RD
Sbjct: 279 QGSEDEEKQSENERRNDQDYTDRERE-RNRSRDRDSRDYSSRSDHRDYRDRDRDRSRDRD 337
Query: 132 RPKRHESESYLREDQDRRGGDKS--STGRGDSSSHRHRE 168
R R +S Y D+D R D+ S+G SSS HR+
Sbjct: 338 RDYR-DSRDYRDRDRDYRDRDRDHYSSGGSSSSSRDHRD 375
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 110 (43.8 bits), Expect = 0.00094, P = 0.00094
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 73 EGNPNQSDRREEKRSIRHD--HREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDE 130
E + + D R+++R + HRE R D G+ + KR R + + E +D RR+
Sbjct: 102 EDDVEEEDERDKRRVNEKERGHREHER-DRGK-DRKRDREREERKDKEREREKDRERRER 159
Query: 131 KRPKRHESESYLREDQDRRGGDKSSTGRG-DSSSHRHRER 169
+R +R + RE ++R G++ R + S R+RER
Sbjct: 160 EREEREKERVKERERREREDGERDRREREKERGSRRNRER 199
>DICTYBASE|DDB_G0292724 [details] [associations]
symbol:taf2 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
InterPro:IPR014782 Pfam:PF01433 dictyBase:DDB_G0292724
GenomeReviews:CM000155_GR EMBL:AAFI02000194 GO:GO:0008270
eggNOG:COG0308 GO:GO:0004222 GO:GO:0006366 GO:GO:0003743
GO:GO:0005669 KO:K03128 RefSeq:XP_002649090.1
EnsemblProtists:DDB0304679 GeneID:8628785 KEGG:ddi:DDB_G0292724
OMA:DRDKEHR Uniprot:C7G081
Length = 2044
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 35/106 (33%), Positives = 49/106 (46%)
Query: 58 NDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEF 117
N+S++ S ++ N N + RE K S +HR DH R +R R S +
Sbjct: 1580 NNSNTNNNASNKIE-NNNNNNGEHREHKSSSEKEHR-----DH-RVSSERDHRASIGSSK 1632
Query: 118 EARSRE-DHYRRDEKRPKRHESE---SYLREDQDRRGGDKSSTGRG 159
E R R+ +H RD +R K H S S E R D+SS+G G
Sbjct: 1633 EHRDRDREHRDRDRERDKEHRSNRNSSNSGERDHREKNDRSSSGGG 1678
>UNIPROTKB|Q8WVK2 [details] [associations]
symbol:SNRNP27 "U4/U6.U5 small nuclear ribonucleoprotein 27
kDa protein" species:9606 "Homo sapiens" [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=NAS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
EMBL:AC019206 CTD:11017 eggNOG:NOG137437 KO:K12846 OMA:NIKKPRR
OrthoDB:EOG480HZF InterPro:IPR013957 Pfam:PF08648 EMBL:X76302
EMBL:BC017890 IPI:IPI00017289 PIR:I38191 RefSeq:NP_006848.1
UniGene:Hs.54649 ProteinModelPortal:Q8WVK2 IntAct:Q8WVK2
STRING:Q8WVK2 PhosphoSite:Q8WVK2 DMDM:74760570 PaxDb:Q8WVK2
PRIDE:Q8WVK2 DNASU:11017 Ensembl:ENST00000244227
Ensembl:ENST00000450162 GeneID:11017 KEGG:hsa:11017 UCSC:uc002sfw.3
GeneCards:GC02P070120 HGNC:HGNC:30240 HPA:HPA034541
neXtProt:NX_Q8WVK2 PharmGKB:PA164726114 HOGENOM:HOG000089971
HOVERGEN:HBG094639 ChiTaRS:SNRNP27 GenomeRNAi:11017 NextBio:41857
ArrayExpress:Q8WVK2 Bgee:Q8WVK2 CleanEx:HS_SNRNP27
Genevestigator:Q8WVK2 GermOnline:ENSG00000124380 Uniprot:Q8WVK2
Length = 155
Score = 97 (39.2 bits), Expect = 0.00099, P = 0.00099
Identities = 33/93 (35%), Positives = 46/93 (49%)
Query: 77 NQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRH 136
++S RRE +RS R RE+ R RRE RSR + + +RSR H RR + P+RH
Sbjct: 6 SRSPRRERRRS-RSTSRERERR---RRERSRSR---ERDRRRSRSRSPHRRRS-RSPRRH 57
Query: 137 ESESYLRED-QDRRGGDKSSTGRGDSSSHRHRE 168
S S ++RR +K T S + E
Sbjct: 58 RSTSPSPSRLKERRDEEKKETKETKSKERQITE 90
>TAIR|locus:2115280 [details] [associations]
symbol:ATU2AF65A species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0042742 "defense
response to bacterium" evidence=IEP] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR006529 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0000166 GO:GO:0042742 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:AL161589 GO:GO:0000398 EMBL:Z99708 HSSP:P26368 EMBL:AF462805
EMBL:AY080711 EMBL:AY143980 EMBL:BT000965 EMBL:BX827587
IPI:IPI00524736 IPI:IPI00525889 IPI:IPI00534734 PIR:C85433
RefSeq:NP_195387.1 RefSeq:NP_849509.1 RefSeq:NP_974695.1
UniGene:At.21204 ProteinModelPortal:O23212 SMR:O23212 IntAct:O23212
STRING:O23212 PaxDb:O23212 PRIDE:O23212 EnsemblPlants:AT4G36690.1
GeneID:829822 KEGG:ath:AT4G36690 TAIR:At4g36690 eggNOG:NOG298004
HOGENOM:HOG000180745 InParanoid:O23212 KO:K12837 OMA:EDIRMEA
PhylomeDB:O23212 ProtClustDB:CLSN2915914 Genevestigator:O23212
TIGRFAMs:TIGR01642 Uniprot:O23212
Length = 573
Score = 107 (42.7 bits), Expect = 0.0010, P = 0.0010
Identities = 28/99 (28%), Positives = 43/99 (43%)
Query: 72 LEGNPNQSDRREEKRSIRHDHREKPR-EDHGRREDKRSRRHSDNNEFEARSREDHYRRDE 130
L+ P + R E+ + R RE+ + D R D R S + + E +S+E +D
Sbjct: 33 LDSKPKRESRDHERETSRSKDREREKGRDKDRERDSEVSRRSRDRDGE-KSKERSRDKDR 91
Query: 131 KRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 169
+RH S R+ RG + GR D R R+R
Sbjct: 92 DHRERHHRSSRHRDHSRERGERRERGGRDDDDYRRSRDR 130
>UNIPROTKB|F1NGV1 [details] [associations]
symbol:ZC3H15 "Zinc finger CCCH domain-containing protein
15" species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005737 GO:GO:0005730 GO:GO:0008270
GO:GO:0019221 GO:GO:0003676 GeneTree:ENSGT00390000015818
IPI:IPI00604122 EMBL:AADN02034542 EMBL:AADN02034543
Ensembl:ENSGALT00000004204 ArrayExpress:F1NGV1 Uniprot:F1NGV1
Length = 403
Score = 85 (35.0 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 7 VCRAFQRGECTRGDGCKFSHN 27
VC F++G+CT+GD CKFSH+
Sbjct: 79 VCAFFKQGQCTKGDKCKFSHD 99
Score = 59 (25.8 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 22/89 (24%), Positives = 40/89 (44%)
Query: 80 DRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESE 139
+R+ EKRS+ D R++ E K + + D + E + H ++K+PK
Sbjct: 103 ERKCEKRSVYIDARDEDLE-------KDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVC 155
Query: 140 SYLRE--DQDRRGGDKSSTGRGDSSSHRH 166
Y + + ++ G G GD+ +RH
Sbjct: 156 KYFLDAIENNKYGWFWVCPGGGDNCMYRH 184
>UNIPROTKB|I3LNE5 [details] [associations]
symbol:SNRNP70 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043484 "regulation of RNA splicing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0043484 GO:GO:0000398 OMA:KKSRGYL
InterPro:IPR022023 Pfam:PF12220 GeneTree:ENSGT00530000063750
EMBL:FP102974 Ensembl:ENSSSCT00000022304 Uniprot:I3LNE5
Length = 452
Score = 106 (42.4 bits), Expect = 0.0010, P = 0.0010
Identities = 35/110 (31%), Positives = 48/110 (43%)
Query: 56 GKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDH-GRREDKRSRRHSDN 114
G++D+S G L DR E+R R R+K RE R D+R R S +
Sbjct: 212 GRDDTSRYDERPGPSPLPHRDRDRDRERERRE-RSRERDKERERRRSRSRDRRRRSRSRD 270
Query: 115 NEFEARSREDHYRRDEKRPKRHE-SESYLREDQDR----RGGDKSSTGRG 159
E RSRE +D +R +R S R +++R RGG G G
Sbjct: 271 KEERRRSRERSKDKDRERKRRSSRSRERARRERERKEELRGGGGGGGGGG 320
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.129 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 169 169 0.00082 108 3 11 23 0.48 32
31 0.47 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 117
No. of states in DFA: 563 (60 KB)
Total size of DFA: 162 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.38u 0.10s 28.48t Elapsed: 00:00:01
Total cpu time: 28.39u 0.10s 28.49t Elapsed: 00:00:01
Start: Fri May 10 04:01:07 2013 End: Fri May 10 04:01:08 2013
WARNINGS ISSUED: 1