Query 030923
Match_columns 169
No_of_seqs 24 out of 26
Neff 2.7
Searched_HMMs 29240
Date Mon Mar 25 10:13:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030923.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030923hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2q_A Muscleblind-like protei 97.8 7.5E-06 2.6E-10 55.9 1.5 26 4-29 5-31 (70)
2 3d2n_A Muscleblind-like protei 97.8 8.3E-06 2.8E-10 58.3 1.8 27 4-30 8-35 (83)
3 2rpp_A Muscleblind-like protei 97.7 1.1E-05 3.8E-10 58.6 1.6 27 4-30 16-43 (89)
4 2e5s_A Otthump00000018578; ZF- 97.4 2.1E-05 7.2E-10 57.5 -0.5 27 4-30 19-46 (98)
5 3d2q_A Muscleblind-like protei 97.2 0.00011 3.9E-09 50.0 1.4 25 4-29 41-65 (70)
6 3d2n_A Muscleblind-like protei 97.2 0.00011 3.8E-09 52.4 1.4 25 4-29 42-66 (83)
7 2rhk_C Cleavage and polyadenyl 97.0 0.00015 5.1E-09 50.1 0.9 26 4-29 15-40 (72)
8 2d9n_A Cleavage and polyadenyl 96.9 0.00027 9.2E-09 48.8 1.6 27 4-30 9-35 (77)
9 2rpp_A Muscleblind-like protei 96.8 0.00035 1.2E-08 50.7 1.4 25 4-29 50-74 (89)
10 2e5s_A Otthump00000018578; ZF- 96.8 0.00035 1.2E-08 51.0 1.3 26 3-29 54-79 (98)
11 2cqe_A KIAA1064 protein; CCCH 96.5 0.0012 4.1E-08 47.9 2.2 24 4-27 12-35 (98)
12 1m9o_A Tristetraproline; Cys3H 96.4 0.0011 3.9E-08 44.4 1.8 28 5-32 12-40 (77)
13 2cqe_A KIAA1064 protein; CCCH 95.6 0.0041 1.4E-07 45.1 1.6 24 6-29 37-61 (98)
14 1m9o_A Tristetraproline; Cys3H 94.8 0.0048 1.6E-07 41.3 0.0 24 6-29 51-75 (77)
15 2d9m_A Zinc finger CCCH-type d 94.6 0.013 4.3E-07 41.5 1.6 24 6-29 21-44 (69)
16 2d9n_A Cleavage and polyadenyl 94.5 0.014 4.9E-07 40.1 1.8 25 5-30 38-63 (77)
17 2rhk_C Cleavage and polyadenyl 93.3 0.027 9.3E-07 38.7 1.3 25 5-30 44-69 (72)
18 3u1l_A PRE-mRNA-splicing facto 92.0 0.041 1.4E-06 45.3 0.9 23 6-28 71-93 (240)
19 3u9g_A Zinc finger CCCH-type a 69.1 1.7 6E-05 36.5 1.5 27 4-31 174-200 (229)
20 3u9g_A Zinc finger CCCH-type a 64.9 2.3 7.9E-05 35.8 1.4 30 5-34 89-122 (229)
21 2fc6_A Nuclear, target of EGR1 52.1 4.7 0.00016 27.1 0.9 29 4-32 19-48 (50)
No 1
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=97.76 E-value=7.5e-06 Score=55.94 Aligned_cols=26 Identities=46% Similarity=1.174 Sum_probs=23.4
Q ss_pred ccccchhhhcccccCCCC-cccccchh
Q 030923 4 ERGVCRAFQRGECTRGDG-CKFSHNEQ 29 (169)
Q Consensus 4 ~~~vc~afq~gec~rg~~-crfshd~~ 29 (169)
...||..||+|.|++|++ |+|+|+..
T Consensus 5 k~~vC~~f~~G~C~rg~~~C~f~H~~~ 31 (70)
T 3d2q_A 5 RLEVCREYQRGNCNRGENDCRFAHPAD 31 (70)
T ss_dssp EEEBCHHHHTTCCSSCTTTCSSBCCCT
T ss_pred cchhCHHHhcCCCCCCCCCCCCccCcc
Confidence 457999999999999996 99999875
No 2
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=97.76 E-value=8.3e-06 Score=58.32 Aligned_cols=27 Identities=52% Similarity=1.070 Sum_probs=24.1
Q ss_pred ccccchhhhcccccCCC-Ccccccchhc
Q 030923 4 ERGVCRAFQRGECTRGD-GCKFSHNEQR 30 (169)
Q Consensus 4 ~~~vc~afq~gec~rg~-~crfshd~~~ 30 (169)
.+.||..||+|.|++|+ .|+|+|.+..
T Consensus 8 ~~~VCr~FlrG~C~r~d~~C~f~H~~~~ 35 (83)
T 3d2n_A 8 TLEVCREFQRGTCSRPDTECKFAHPSKS 35 (83)
T ss_dssp EEEBCTTGGGTCCCSCTTTCSSBCCCTT
T ss_pred cchhcHHHhcCCCCCCCCCCCCcCCCcc
Confidence 35799999999999997 9999999863
No 3
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=97.68 E-value=1.1e-05 Score=58.61 Aligned_cols=27 Identities=52% Similarity=1.084 Sum_probs=24.5
Q ss_pred ccccchhhhcccccCCC-Ccccccchhc
Q 030923 4 ERGVCRAFQRGECTRGD-GCKFSHNEQR 30 (169)
Q Consensus 4 ~~~vc~afq~gec~rg~-~crfshd~~~ 30 (169)
...||..||+|.|++|+ .|+|+|.+..
T Consensus 16 ~~~VCrdFlrG~C~r~d~~CrfsH~~~~ 43 (89)
T 2rpp_A 16 TLEVCRQFQRGTCSRSDEECKFAHPPKS 43 (89)
T ss_dssp EECBCHHHHHTCCCCCTTTSSSBCCCSS
T ss_pred hhhhchHHhcCCCCCCCCCCCCcCCCcc
Confidence 46799999999999998 9999999865
No 4
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.37 E-value=2.1e-05 Score=57.53 Aligned_cols=27 Identities=48% Similarity=1.159 Sum_probs=23.9
Q ss_pred ccccchhhhcccccCCC-Ccccccchhc
Q 030923 4 ERGVCRAFQRGECTRGD-GCKFSHNEQR 30 (169)
Q Consensus 4 ~~~vc~afq~gec~rg~-~crfshd~~~ 30 (169)
...||..|++|.|++|+ .|+|+|+...
T Consensus 19 k~~VCr~FlrG~C~rgd~~C~FsH~~~~ 46 (98)
T 2e5s_A 19 KLEVCREFQRGNCARGETDCRFAHPADS 46 (98)
T ss_dssp EEEBCSHHHHTCCSSHHHHCSSBCCSSC
T ss_pred hhhhhHHHhcCcCCCCCCCCCCcCCchh
Confidence 46799999999999999 6999999854
No 5
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=97.17 E-value=0.00011 Score=50.03 Aligned_cols=25 Identities=32% Similarity=0.797 Sum_probs=22.8
Q ss_pred ccccchhhhcccccCCCCcccccchh
Q 030923 4 ERGVCRAFQRGECTRGDGCKFSHNEQ 29 (169)
Q Consensus 4 ~~~vc~afq~gec~rg~~crfshd~~ 29 (169)
...||+.|++|.|++| .|+|.|.++
T Consensus 41 ~~~vC~~flkG~C~r~-~C~y~H~~~ 65 (70)
T 3d2q_A 41 TVTVCMDYIKGRCSRE-KCKYFHPPA 65 (70)
T ss_dssp EEEBCHHHHTTCCCCT-TCCSBCCCH
T ss_pred cceeccccCcCCCCCC-CcCeeCCHH
Confidence 4689999999999999 999999865
No 6
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=97.16 E-value=0.00011 Score=52.45 Aligned_cols=25 Identities=28% Similarity=0.623 Sum_probs=22.9
Q ss_pred ccccchhhhcccccCCCCcccccchh
Q 030923 4 ERGVCRAFQRGECTRGDGCKFSHNEQ 29 (169)
Q Consensus 4 ~~~vc~afq~gec~rg~~crfshd~~ 29 (169)
...||+.|++|.|+++ .|+|.|.+.
T Consensus 42 ~~~vC~dflkG~C~r~-~C~y~H~~~ 66 (83)
T 3d2n_A 42 RVIACFDSLKGRCSRE-NCKYLHPPP 66 (83)
T ss_dssp EEECCHHHHTTCCCCS-SCSSCCCCH
T ss_pred ceeehhHhhhccccCC-CcceeCChH
Confidence 3689999999999999 999999876
No 7
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=97.02 E-value=0.00015 Score=50.10 Aligned_cols=26 Identities=38% Similarity=0.926 Sum_probs=23.4
Q ss_pred ccccchhhhcccccCCCCcccccchh
Q 030923 4 ERGVCRAFQRGECTRGDGCKFSHNEQ 29 (169)
Q Consensus 4 ~~~vc~afq~gec~rg~~crfshd~~ 29 (169)
...||.-|++|.|..|+.|.|+|+..
T Consensus 15 k~~vCk~fl~G~C~~G~~C~fsH~~~ 40 (72)
T 2rhk_C 15 KTVVCKHWLRGLCKKGDQCEFLHEYD 40 (72)
T ss_dssp CCSBCHHHHTTCCCCGGGSSSBCSCC
T ss_pred cCeeCHHHhcCCCCCCCCCCCccccc
Confidence 35699999999999999999999964
No 8
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.94 E-value=0.00027 Score=48.85 Aligned_cols=27 Identities=37% Similarity=0.871 Sum_probs=24.0
Q ss_pred ccccchhhhcccccCCCCcccccchhc
Q 030923 4 ERGVCRAFQRGECTRGDGCKFSHNEQR 30 (169)
Q Consensus 4 ~~~vc~afq~gec~rg~~crfshd~~~ 30 (169)
...||.-|++|.|.+|+.|.|+|+...
T Consensus 9 k~~~C~~fl~G~C~~G~~C~fsH~~~~ 35 (77)
T 2d9n_A 9 KTVVCKHWLRGLCKKGDQCEFLHEYDM 35 (77)
T ss_dssp TTSBCHHHHTTCCSCTTSSSSBCSCCT
T ss_pred cceeCHhHccCcCCCCCCCCCcccccc
Confidence 346999999999999999999999764
No 9
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=96.80 E-value=0.00035 Score=50.67 Aligned_cols=25 Identities=28% Similarity=0.626 Sum_probs=23.0
Q ss_pred ccccchhhhcccccCCCCcccccchh
Q 030923 4 ERGVCRAFQRGECTRGDGCKFSHNEQ 29 (169)
Q Consensus 4 ~~~vc~afq~gec~rg~~crfshd~~ 29 (169)
...||+.|++|.|+++ .|+|.|.+.
T Consensus 50 ~~~vC~dflkG~C~r~-~Cky~H~~~ 74 (89)
T 2rpp_A 50 RVIACFDSLKGRCSRE-NCKYLHPPT 74 (89)
T ss_dssp BEEBCHHHHHTCCCCT-TCCSBCCCH
T ss_pred ceeeehhhhhCcCCCC-CcceecCHH
Confidence 4689999999999999 999999876
No 10
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.78 E-value=0.00035 Score=51.01 Aligned_cols=26 Identities=31% Similarity=0.751 Sum_probs=23.4
Q ss_pred cccccchhhhcccccCCCCcccccchh
Q 030923 3 EERGVCRAFQRGECTRGDGCKFSHNEQ 29 (169)
Q Consensus 3 e~~~vc~afq~gec~rg~~crfshd~~ 29 (169)
+...||+.|++|.|+++ .|+|.|...
T Consensus 54 ~~~~vC~~flkG~C~r~-~C~y~H~~~ 79 (98)
T 2e5s_A 54 NTVTVCMDYIKGRCMRE-KCKYFHPPA 79 (98)
T ss_dssp CEEEBCHHHHHTCCCCT-TCCSBCCCH
T ss_pred CccccchhhccCCCCCC-CcCccCChH
Confidence 45689999999999999 999999874
No 11
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=96.46 E-value=0.0012 Score=47.90 Aligned_cols=24 Identities=29% Similarity=0.915 Sum_probs=21.3
Q ss_pred ccccchhhhcccccCCCCcccccc
Q 030923 4 ERGVCRAFQRGECTRGDGCKFSHN 27 (169)
Q Consensus 4 ~~~vc~afq~gec~rg~~crfshd 27 (169)
...||..|++|.|.+|+.|+|+|+
T Consensus 12 k~~lC~~f~~G~C~~G~~C~f~H~ 35 (98)
T 2cqe_A 12 KRELCKFYITGFCARAENCPYMHG 35 (98)
T ss_dssp CCSBCTTTTTTCCSCSTTCSSBSS
T ss_pred CCccCcccccCcCCCCCCCCCCCC
Confidence 456899999999999999999998
No 12
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=96.42 E-value=0.0011 Score=44.38 Aligned_cols=28 Identities=29% Similarity=0.794 Sum_probs=23.6
Q ss_pred cccchhhh-cccccCCCCcccccchhccc
Q 030923 5 RGVCRAFQ-RGECTRGDGCKFSHNEQRAA 32 (169)
Q Consensus 5 ~~vc~afq-~gec~rg~~crfshd~~~~a 32 (169)
..+|..|+ +|.|..|+.|+|+|+.....
T Consensus 12 t~~C~~f~~~G~C~~G~~C~f~H~~~e~~ 40 (77)
T 1m9o_A 12 TELCRTYSESGRCRYGAKCQFAHGLGELR 40 (77)
T ss_dssp SCCCSGGGGTSCCTTTTTCSSCSSSCCGG
T ss_pred chhCHHhhhCCCcCCCCCccCCCCChhhc
Confidence 46899885 99999999999999986443
No 13
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=95.59 E-value=0.0041 Score=45.07 Aligned_cols=24 Identities=38% Similarity=0.922 Sum_probs=21.6
Q ss_pred ccchhh-hcccccCCCCcccccchh
Q 030923 6 GVCRAF-QRGECTRGDGCKFSHNEQ 29 (169)
Q Consensus 6 ~vc~af-q~gec~rg~~crfshd~~ 29 (169)
.||..| ++|.|..|+.|+|+|...
T Consensus 37 ~~C~~f~~~G~C~~G~~C~f~H~~~ 61 (98)
T 2cqe_A 37 FPCKLYHTTGNCINGDDCMFSHDPL 61 (98)
T ss_dssp SBCSHHHHTSCCSSCTTCSSBCCCC
T ss_pred CcCcCcccCCcCCCCCCCcccCCCC
Confidence 589999 699999999999999864
No 14
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=94.85 E-value=0.0048 Score=41.31 Aligned_cols=24 Identities=38% Similarity=1.002 Sum_probs=0.0
Q ss_pred ccchhhh-cccccCCCCcccccchh
Q 030923 6 GVCRAFQ-RGECTRGDGCKFSHNEQ 29 (169)
Q Consensus 6 ~vc~afq-~gec~rg~~crfshd~~ 29 (169)
.+|..|+ .|.|.+|+.|+|.|+..
T Consensus 51 ~~C~~f~~~G~C~~G~~C~f~H~~~ 75 (77)
T 1m9o_A 51 ELCHKFKLQGRCPYGSRCHFIHNPT 75 (77)
T ss_dssp -------------------------
T ss_pred CcccchhhCcCCCCcCcCCCCCCCC
Confidence 5897664 89999999999999864
No 15
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.57 E-value=0.013 Score=41.55 Aligned_cols=24 Identities=33% Similarity=1.056 Sum_probs=22.1
Q ss_pred ccchhhhcccccCCCCcccccchh
Q 030923 6 GVCRAFQRGECTRGDGCKFSHNEQ 29 (169)
Q Consensus 6 ~vc~afq~gec~rg~~crfshd~~ 29 (169)
-+|-.|++|.|..|+.|.|-|.+.
T Consensus 21 ~LC~~~~~G~C~~G~~C~FAHG~~ 44 (69)
T 2d9m_A 21 SICDRYMNGTCPEGNSCKFAHGNA 44 (69)
T ss_dssp SBCHHHHHSCCSSCSSCSSBSSHH
T ss_pred ccCcccCcCCCCCCCccCCcCCHH
Confidence 479999999999999999999875
No 16
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.51 E-value=0.014 Score=40.06 Aligned_cols=25 Identities=28% Similarity=0.739 Sum_probs=22.2
Q ss_pred cccchhhhc-ccccCCCCcccccchhc
Q 030923 5 RGVCRAFQR-GECTRGDGCKFSHNEQR 30 (169)
Q Consensus 5 ~~vc~afq~-gec~rg~~crfshd~~~ 30 (169)
..||.-|++ |.|. |+.|+|.|....
T Consensus 38 ~~~C~~f~~~G~C~-~~~C~f~H~~~~ 63 (77)
T 2d9n_A 38 MPECYFYSKFGECS-NKECPFLHIDPE 63 (77)
T ss_dssp SCBCHHHHHTCCCC-CSSCSSBCCCTT
T ss_pred CCCCcccCCCCccC-CCCeeccCCCcc
Confidence 468999999 9999 999999998753
No 17
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=93.33 E-value=0.027 Score=38.66 Aligned_cols=25 Identities=28% Similarity=0.764 Sum_probs=22.1
Q ss_pred cccchhhhc-ccccCCCCcccccchhc
Q 030923 5 RGVCRAFQR-GECTRGDGCKFSHNEQR 30 (169)
Q Consensus 5 ~~vc~afq~-gec~rg~~crfshd~~~ 30 (169)
..||.-|++ |.|.. +.|+|.|....
T Consensus 44 ~~~C~~f~~~G~C~~-~~C~y~H~~p~ 69 (72)
T 2rhk_C 44 MSECYFYSKFGECSN-KECPFLHIDPE 69 (72)
T ss_dssp CCBCHHHHHHSCCSB-TTCCSBCCCCC
T ss_pred CCcccccCCCCCCCC-CCeeccCCCcc
Confidence 468999999 99999 99999998643
No 18
>3u1l_A PRE-mRNA-splicing factor CWC2; CSMP, zinc finger; 1.64A {Saccharomyces cerevisiae} PDB: 3u1m_A 3tp2_A
Probab=92.01 E-value=0.041 Score=45.25 Aligned_cols=23 Identities=30% Similarity=0.722 Sum_probs=21.1
Q ss_pred ccchhhhcccccCCCCcccccch
Q 030923 6 GVCRAFQRGECTRGDGCKFSHNE 28 (169)
Q Consensus 6 ~vc~afq~gec~rg~~crfshd~ 28 (169)
-+|.-|.+|.|.+|+.|.|-|..
T Consensus 71 ~~C~ffakG~C~~G~~C~y~H~l 93 (240)
T 3u1l_A 71 FFCLFFAKGMCCLGPKCEYLHHI 93 (240)
T ss_dssp SBCHHHHTTCCSCGGGCSSBBSC
T ss_pred eEcCccccCCCCCCCCCCccCCC
Confidence 38999999999999999999963
No 19
>3u9g_A Zinc finger CCCH-type antiviral protein 1; zinc finger protein; 1.80A {Rattus norvegicus}
Probab=69.12 E-value=1.7 Score=36.53 Aligned_cols=27 Identities=33% Similarity=0.634 Sum_probs=23.2
Q ss_pred ccccchhhhcccccCCCCcccccchhcc
Q 030923 4 ERGVCRAFQRGECTRGDGCKFSHNEQRA 31 (169)
Q Consensus 4 ~~~vc~afq~gec~rg~~crfshd~~~~ 31 (169)
.+-||-.|.+|+|+. .+|+-||+-..+
T Consensus 174 kLHIC~~Fl~G~C~f-~~CkRsH~~~~~ 200 (229)
T 3u9g_A 174 RLHICEHFTRGNCSY-LNCLRSHNLMDR 200 (229)
T ss_dssp SBCSCHHHHTTCCCC-SSCSSCCCTTSH
T ss_pred ceeccchhhcCCcCC-CCccCccCccCc
Confidence 356999999999999 899999997543
No 20
>3u9g_A Zinc finger CCCH-type antiviral protein 1; zinc finger protein; 1.80A {Rattus norvegicus}
Probab=64.91 E-value=2.3 Score=35.79 Aligned_cols=30 Identities=27% Similarity=0.542 Sum_probs=23.9
Q ss_pred cccchhhhccccc----CCCCcccccchhccccC
Q 030923 5 RGVCRAFQRGECT----RGDGCKFSHNEQRAANT 34 (169)
Q Consensus 5 ~~vc~afq~gec~----rg~~crfshd~~~~a~~ 34 (169)
+-+|--|.-|.|+ .+..|+||||-.++-|.
T Consensus 89 LHLCK~~l~G~C~~~~~~~~~Ck~SHdi~s~~N~ 122 (229)
T 3u9g_A 89 LHLCKLNLLGRCHYAQSQRNLCKYSHDVLSEQNF 122 (229)
T ss_dssp BCCCHHHHTTCCGGGTCCSSCCSSCSCTTCHHHH
T ss_pred eeechhhhcCcCCcccCCCCCcccccccCchhHH
Confidence 4578888899994 56889999998877654
No 21
>2fc6_A Nuclear, target of EGR1, member 1; structure genomics, ZF-CCCH domain, member 1(nuclear), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.66.1.1
Probab=52.07 E-value=4.7 Score=27.08 Aligned_cols=29 Identities=28% Similarity=0.615 Sum_probs=23.2
Q ss_pred ccccchhhhc-ccccCCCCcccccchhccc
Q 030923 4 ERGVCRAFQR-GECTRGDGCKFSHNEQRAA 32 (169)
Q Consensus 4 ~~~vc~afq~-gec~rg~~crfshd~~~~a 32 (169)
...||--|-. |-|..|..|-||||-.-+.
T Consensus 19 ~~~iC~~FSayGwCp~G~~Cp~SHDiDl~~ 48 (50)
T 2fc6_A 19 PTSICDNFSAYGWCPLGPQCPQSHDISGPS 48 (50)
T ss_dssp CSCBCSHHHHTCCCTTGGGCSSBCCCCCCC
T ss_pred ccchhhhccccccCCCCCCCCccccCCCCC
Confidence 4678887764 8999999999999976443
Done!