Your job contains 1 sequence.
>030925
MHSVTIKFPRLGRVFTTLKVTEAVTSSRSLCTVTESRTQKLERISDELLDLTKLERYDFA
TLLGCKLGLDRFGPVVPAFPSSGPAASGSTSAETKAAEKTAFDVKLEKYDQAAKIKIIKE
VKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKELNAIVVLE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030925
(169 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2120116 - symbol:AT4G37660 species:3702 "Arabi... 343 3.3e-31 1
TAIR|locus:2115385 - symbol:AT4G36420 species:3702 "Arabi... 252 1.5e-21 1
TAIR|locus:2080369 - symbol:AT3G06040 species:3702 "Arabi... 231 2.5e-19 1
TAIR|locus:2020678 - symbol:AT1G70190 species:3702 "Arabi... 221 2.8e-18 1
GENEDB_PFALCIPARUM|PFB0545c - symbol:PFB0545c "ribosomal ... 168 2.0e-16 2
UNIPROTKB|O96202 - symbol:PFB0545c "Mitochondrial ribosom... 168 2.0e-16 2
ASPGD|ASPL0000042202 - symbol:AN2057 species:162425 "Emer... 176 4.1e-16 2
TAIR|locus:2056921 - symbol:AT2G03130 species:3702 "Arabi... 188 8.8e-15 1
TIGR_CMR|CBU_0229 - symbol:CBU_0229 "ribosomal protein L7... 172 4.4e-13 1
CGD|CAL0006345 - symbol:orf19.2275 species:5476 "Candida ... 164 3.1e-12 1
POMBASE|SPCC4B3.09c - symbol:SPCC4B3.09c "mitochondrial r... 164 3.1e-12 1
FB|FBgn0011787 - symbol:mRpL12 "mitochondrial ribosomal p... 162 5.0e-12 1
SGD|S000003036 - symbol:MNP1 "Protein associated with the... 160 8.2e-12 1
TIGR_CMR|BA_0100 - symbol:BA_0100 "ribosomal protein L7/L... 159 1.0e-11 1
TAIR|locus:2086435 - symbol:RPL12-A "ribosomal protein L1... 155 2.8e-11 1
UNIPROTKB|P0A7K2 - symbol:rplL species:83333 "Escherichia... 151 7.4e-11 1
TIGR_CMR|SPO_3509 - symbol:SPO_3509 "ribosomal protein L7... 150 9.4e-11 1
DICTYBASE|DDB_G0274407 - symbol:DDB_G0274407 "39S ribosom... 146 2.5e-10 1
UNIPROTKB|P02394 - symbol:rplL "50S ribosomal protein L7/... 146 2.5e-10 1
TIGR_CMR|GSU_2864 - symbol:GSU_2864 "ribosomal protein L7... 146 2.5e-10 1
TIGR_CMR|CJE_0527 - symbol:CJE_0527 "ribosomal protein L7... 145 3.2e-10 1
TIGR_CMR|CHY_2320 - symbol:CHY_2320 "ribosomal protein L7... 143 5.2e-10 1
TAIR|locus:2086450 - symbol:RPL12-C "ribosomal protein L1... 140 1.1e-09 1
UNIPROTKB|E1C3B6 - symbol:MRPL12 "Uncharacterized protein... 137 2.2e-09 1
UNIPROTKB|Q9KV31 - symbol:rplL "50S ribosomal protein L7/... 134 4.7e-09 1
TIGR_CMR|DET_0990 - symbol:DET_0990 "ribosomal protein L7... 134 4.7e-09 1
TIGR_CMR|VC_0327 - symbol:VC_0327 "ribosomal protein L7/L... 134 4.7e-09 1
TIGR_CMR|CPS_4770 - symbol:CPS_4770 "ribosomal protein L7... 128 2.0e-08 1
TIGR_CMR|SO_0223 - symbol:SO_0223 "ribosomal protein L7/L... 128 2.0e-08 1
GENEDB_PFALCIPARUM|PFE1225w - symbol:PFE1225w "50S riboso... 113 2.5e-08 2
UNIPROTKB|Q8I3L9 - symbol:PFE1225w "Organelle ribosomal p... 113 2.5e-08 2
UNIPROTKB|Q7YR75 - symbol:MRPL12 "39S ribosomal protein L... 126 3.3e-08 1
UNIPROTKB|P52827 - symbol:MRPL12 "39S ribosomal protein L... 126 3.3e-08 1
MGI|MGI:1926273 - symbol:Mrpl12 "mitochondrial ribosomal ... 126 3.3e-08 1
UNIPROTKB|E2QVI3 - symbol:MRPL12 "Uncharacterized protein... 125 4.2e-08 1
UNIPROTKB|P52815 - symbol:MRPL12 "39S ribosomal protein L... 125 4.2e-08 1
RGD|1588559 - symbol:Mrpl12 "mitochondrial ribosomal prot... 126 1.0e-07 1
WB|WBGene00012361 - symbol:mrpl-12 species:6239 "Caenorha... 120 1.4e-07 1
UNIPROTKB|O18180 - symbol:mrpl-12 "Protein MRPL-12" speci... 120 1.4e-07 1
TIGR_CMR|ECH_0953 - symbol:ECH_0953 "ribosomal protein L7... 119 1.8e-07 1
TAIR|locus:2086440 - symbol:RPL12-B "ribosomal protein L1... 117 3.0e-07 1
UNIPROTKB|P0A5V2 - symbol:rplL "50S ribosomal protein L7/... 116 3.8e-07 1
UNIPROTKB|A5PJ86 - symbol:MRPL12 "Uncharacterized protein... 113 1.7e-06 1
TIGR_CMR|APH_1025 - symbol:APH_1025 "ribosomal protein L7... 102 1.1e-05 1
UNIPROTKB|H9KUU7 - symbol:LOC100848134 "Uncharacterized p... 110 1.4e-05 1
UNIPROTKB|F6XRN5 - symbol:MRPL12 "Uncharacterized protein... 109 1.8e-05 1
UNIPROTKB|B4DLN1 - symbol:SLC25A10 "Uncharacterized prote... 109 1.8e-05 1
ZFIN|ZDB-GENE-050417-187 - symbol:mrpl12 "mitochondrial r... 104 5.7e-05 1
TIGR_CMR|NSE_0679 - symbol:NSE_0679 "ribosomal protein L7... 92 0.00071 1
>TAIR|locus:2120116 [details] [associations]
symbol:AT4G37660 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006412 GO:GO:0006508 GO:GO:0005840
EMBL:AL035605 EMBL:AL161591 GO:GO:0003735 GO:GO:0008233
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 InterPro:IPR015608
PANTHER:PTHR11809:SF6 HSSP:P02392 UniGene:At.31233 UniGene:At.31234
EMBL:AY074583 EMBL:AY094012 EMBL:AY088083 IPI:IPI00535366
PIR:T04723 RefSeq:NP_195481.1 ProteinModelPortal:Q9SZF8 SMR:Q9SZF8
STRING:Q9SZF8 PaxDb:Q9SZF8 PRIDE:Q9SZF8 EnsemblPlants:AT4G37660.1
GeneID:829920 KEGG:ath:AT4G37660 TAIR:At4g37660 InParanoid:Q9SZF8
OMA:CAVASPE PhylomeDB:Q9SZF8 ProtClustDB:CLSN2685808
ArrayExpress:Q9SZF8 Genevestigator:Q9SZF8 Uniprot:Q9SZF8
Length = 167
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 71/153 (46%), Positives = 99/153 (64%)
Query: 19 KVTEAVTSSRSLCTVT--ESRTQKLERISDELLDLTKLERYDFATLLGCKLGLDRFXXXX 76
+ T +++R LC V E+RT+KLERI+D+LL L ++E YD++ L K+GL+R+
Sbjct: 18 RTTPLSSATRHLCAVASPEARTKKLERIADDLLKLNRIELYDYSLLFSHKIGLNRYGSAV 77
Query: 77 XXXXXXXXXXXXXXXXXXXXXXXXXFDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLV 136
FDVKLEK++ A+KIK+IKE++ FT LGLKE+K LV
Sbjct: 78 AVTGSVGDASASTETKTAEKTT---FDVKLEKFEAASKIKVIKEIRAFTDLGLKEAKALV 134
Query: 137 EKAPAVIKKGVTKEEADKIVEKLKELNAIVVLE 169
EKAP ++K G+TKEEA+KI+EKLK + AIV LE
Sbjct: 135 EKAPVIVKNGLTKEEAEKIMEKLKAVGAIVALE 167
>TAIR|locus:2115385 [details] [associations]
symbol:AT4G36420 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AL161589 EMBL:Z99708
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 SUPFAM:SSF48300
InterPro:IPR015608 PANTHER:PTHR11809:SF6 TIGRFAMs:TIGR00855
OMA:TMDLTEI HSSP:P02392 EMBL:AF370294 EMBL:AY052308 EMBL:AY063041
IPI:IPI00520865 PIR:H85429 RefSeq:NP_195360.1 UniGene:At.4606
ProteinModelPortal:O23238 SMR:O23238 STRING:O23238 PaxDb:O23238
PRIDE:O23238 EnsemblPlants:AT4G36420.1 GeneID:829794
KEGG:ath:AT4G36420 TAIR:At4g36420 InParanoid:O23238
PhylomeDB:O23238 ProtClustDB:CLSN2915904 Genevestigator:O23238
Uniprot:O23238
Length = 179
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 64/165 (38%), Positives = 88/165 (53%)
Query: 18 LKVTEAVTSSRSLCTVTE-------SRTQKLERISDELLDLTKLERYDFATLLGCKLGLD 70
LK TE +SS L T+ ++++ + +I +EL +LT LE D +L KL +
Sbjct: 15 LKSTETRSSSVQLFTIQSRSYSSPATQSENVSKIVNELSNLTLLETMDLTEILRQKLNIS 74
Query: 71 RFXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXFDVKLEKYDQAAKIKIIKEVKTF 124
FDV L+ YD +KIK+IKEV+T
Sbjct: 75 ELPVMAAMMPGMSLPGSGASKSAGGEGKEKKKEAKTAFDVMLQAYDAVSKIKVIKEVRTI 134
Query: 125 TGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKELNAIVVLE 169
T LGLKE+KDLVEKAP ++KKGV+KEEA+KI+EKLK + A V +E
Sbjct: 135 TALGLKEAKDLVEKAPTLLKKGVSKEEAEKIIEKLKAVGAKVAME 179
>TAIR|locus:2080369 [details] [associations]
symbol:AT3G06040 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0006508 GO:GO:0005840
GO:GO:0003735 GO:GO:0008233 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 EMBL:AC068073 eggNOG:COG0222 HOGENOM:HOG000248814
InterPro:IPR015608 PANTHER:PTHR11809:SF6 HSSP:P02392 EMBL:AY063991
EMBL:AY096690 IPI:IPI00546526 RefSeq:NP_001078113.1
RefSeq:NP_187255.1 RefSeq:NP_974234.1 UniGene:At.27114
ProteinModelPortal:Q9M7T1 SMR:Q9M7T1 STRING:Q9M7T1 PaxDb:Q9M7T1
PRIDE:Q9M7T1 EnsemblPlants:AT3G06040.1 EnsemblPlants:AT3G06040.2
EnsemblPlants:AT3G06040.3 GeneID:819777 KEGG:ath:AT3G06040
TAIR:At3g06040 InParanoid:Q9M7T1 OMA:KPKKYKY PhylomeDB:Q9M7T1
ProtClustDB:CLSN2684635 ArrayExpress:Q9M7T1 Genevestigator:Q9M7T1
Uniprot:Q9M7T1
Length = 186
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 43/68 (63%), Positives = 59/68 (86%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
FDVKLEK++ + KIK+IKEV+TFT LGLKE+K+LVEK PA++K+GVTKEEA++I+ K+K
Sbjct: 119 FDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVTKEEANEIIAKIKA 178
Query: 162 LNAIVVLE 169
+ I V+E
Sbjct: 179 VGGIAVME 186
>TAIR|locus:2020678 [details] [associations]
symbol:AT1G70190 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0006354
"DNA-dependent transcription, elongation" evidence=RCA]
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AC002062 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 HOGENOM:HOG000248814
SUPFAM:SSF48300 InterPro:IPR015608 PANTHER:PTHR11809:SF6
OMA:MYCTRYC HSSP:P29396 EMBL:AF360123 EMBL:AY051024 IPI:IPI00545010
PIR:G96724 RefSeq:NP_001185360.1 RefSeq:NP_564986.1
UniGene:At.10300 ProteinModelPortal:O04527 SMR:O04527 STRING:O04527
PaxDb:O04527 PRIDE:O04527 EnsemblPlants:AT1G70190.1
EnsemblPlants:AT1G70190.2 GeneID:843355 KEGG:ath:AT1G70190
TAIR:At1g70190 eggNOG:NOG238976 InParanoid:O04527 PhylomeDB:O04527
ProtClustDB:CLSN2689119 ArrayExpress:O04527 Genevestigator:O04527
Uniprot:O04527
Length = 208
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 43/68 (63%), Positives = 58/68 (85%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
F++KLE ++ +AKIKIIKE+++FT LGLKE+K LVEK PA++K G++KEE +KI+EKLK
Sbjct: 141 FEIKLESFEASAKIKIIKELRSFTDLGLKEAKALVEKTPAILKAGLSKEEGEKILEKLKA 200
Query: 162 LNAIVVLE 169
L A VVLE
Sbjct: 201 LGAKVVLE 208
>GENEDB_PFALCIPARUM|PFB0545c [details] [associations]
symbol:PFB0545c "ribosomal protein L7/L12,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 EMBL:AE001362
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0022625 HSSP:P02392 PIR:E71612 RefSeq:XP_001349628.1
ProteinModelPortal:O96202 PRIDE:O96202
EnsemblProtists:PFB0545c:mRNA GeneID:812710 KEGG:pfa:PFB0545c
EuPathDB:PlasmoDB:PF3D7_0212200 HOGENOM:HOG000284354 OMA:NAMNINT
ProtClustDB:CLSZ2432697 Uniprot:O96202
Length = 255
Score = 168 (64.2 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
F+VKLEK+D KI IKE++ T +GLKE+KD+VE AP I+K V E+A+++ + ++
Sbjct: 188 FNVKLEKFDVKNKINTIKEIRKITNVGLKEAKDMVESAPFYIQKSVPSEKAEEMKKSFEQ 247
Query: 162 LNAIVVLE 169
L A ++LE
Sbjct: 248 LGATIILE 255
Score = 49 (22.3 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 38 TQKLERISDELLDLTKLERYDFATLLGCKL-GLDRF 72
++K+ ++ DE+L+LT +E D L KL G +F
Sbjct: 78 SKKVLKLVDEILNLTLIEAADLCDLCQEKLEGNQKF 113
>UNIPROTKB|O96202 [details] [associations]
symbol:PFB0545c "Mitochondrial ribosomal protein L12,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS] InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 EMBL:AE001362
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0022625 HSSP:P02392 PIR:E71612 RefSeq:XP_001349628.1
ProteinModelPortal:O96202 PRIDE:O96202
EnsemblProtists:PFB0545c:mRNA GeneID:812710 KEGG:pfa:PFB0545c
EuPathDB:PlasmoDB:PF3D7_0212200 HOGENOM:HOG000284354 OMA:NAMNINT
ProtClustDB:CLSZ2432697 Uniprot:O96202
Length = 255
Score = 168 (64.2 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
F+VKLEK+D KI IKE++ T +GLKE+KD+VE AP I+K V E+A+++ + ++
Sbjct: 188 FNVKLEKFDVKNKINTIKEIRKITNVGLKEAKDMVESAPFYIQKSVPSEKAEEMKKSFEQ 247
Query: 162 LNAIVVLE 169
L A ++LE
Sbjct: 248 LGATIILE 255
Score = 49 (22.3 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 38 TQKLERISDELLDLTKLERYDFATLLGCKL-GLDRF 72
++K+ ++ DE+L+LT +E D L KL G +F
Sbjct: 78 SKKVLKLVDEILNLTLIEAADLCDLCQEKLEGNQKF 113
>ASPGD|ASPL0000042202 [details] [associations]
symbol:AN2057 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0009060 "aerobic respiration" evidence=IEA] InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 GO:GO:0005739
GO:GO:0006412 EMBL:BN001307 GO:GO:0005840 EMBL:AACD01000032
GO:GO:0003735 GO:GO:0009060 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 HOGENOM:HOG000248814
OrthoDB:EOG49CTJ7 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 RefSeq:XP_659661.1 ProteinModelPortal:Q5BBM3
STRING:Q5BBM3 EnsemblFungi:CADANIAT00008726 GeneID:2875113
KEGG:ani:AN2057.2 OMA:RRLPADY Uniprot:Q5BBM3
Length = 184
Score = 176 (67.0 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 36/68 (52%), Positives = 47/68 (69%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
F++KLE D A K K+IKEVKT GL L +SK VE P V+K+ V KEEA+K++E LK
Sbjct: 117 FNLKLESVDAAQKAKVIKEVKTLLGLSLVDSKKFVESVPKVLKESVPKEEAEKLIETLKA 176
Query: 162 LNAIVVLE 169
+ A V+E
Sbjct: 177 VGAKAVME 184
Score = 38 (18.4 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 40 KLERISDELLDLTKLERYDFATLLGCKLGL 69
K+ +I D++ L LE D L +L +
Sbjct: 49 KITQIVDQISQLNLLETADLVASLKSRLNI 78
>TAIR|locus:2056921 [details] [associations]
symbol:AT2G03130 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015934 "large
ribosomal subunit" evidence=ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC005313 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 HSSP:P29396 EMBL:DQ056524 IPI:IPI00534647
PIR:T02713 RefSeq:NP_178412.1 UniGene:At.52613
ProteinModelPortal:O81061 SMR:O81061 STRING:O81061
EnsemblPlants:AT2G03130.1 GeneID:814842 KEGG:ath:AT2G03130
TAIR:At2g03130 eggNOG:NOG238575 HOGENOM:HOG000115154
InParanoid:O81061 OMA:IMEDAKE PhylomeDB:O81061
ProtClustDB:CLSN2913253 ArrayExpress:O81061 Genevestigator:O81061
Uniprot:O81061
Length = 110
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
F+VKLE ++ AKIKIIKEV+ G+GLKE+ LV KAP V+K G++KEE +++VEKL
Sbjct: 24 FEVKLESFEARAKIKIIKEVRRIIGVGLKEAMKLVVKAPTVLKTGLSKEEGEEVVEKLNA 83
Query: 162 LNAIVVLE 169
L A VL+
Sbjct: 84 LGAEAVLQ 91
>TIGR_CMR|CBU_0229 [details] [associations]
symbol:CBU_0229 "ribosomal protein L7/L12" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300
HOGENOM:HOG000248813 KO:K02935 TIGRFAMs:TIGR00855
ProtClustDB:PRK00157 OMA:EAVKNMT EMBL:CP001019 EMBL:U86688
RefSeq:YP_002304195.1 ProteinModelPortal:B6J272 SMR:B6J272
STRING:B6J272 PRIDE:B6J272 GeneID:7014192 GenomeReviews:CP001019_GR
KEGG:cbg:CbuG_1776 PATRIC:17914649 Uniprot:B6J272
Length = 126
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 36/68 (52%), Positives = 51/68 (75%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
F+VK+ + KI +IK ++T TGLGLKE+KDLVE P+V+K+ V+KEEA+KI ++L+E
Sbjct: 60 FNVKMVSFGDN-KIGVIKAIRTITGLGLKEAKDLVESVPSVVKESVSKEEAEKIKKELEE 118
Query: 162 LNAIVVLE 169
A V LE
Sbjct: 119 AGAKVELE 126
>CGD|CAL0006345 [details] [associations]
symbol:orf19.2275 species:5476 "Candida albicans" [GO:0042645
"mitochondrial nucleoid" evidence=IEA] [GO:0009060 "aerobic
respiration" evidence=IEA] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 CGD:CAL0006345
HAMAP:MF_00368 EMBL:AACQ01000095 EMBL:AACQ01000096 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 HOGENOM:HOG000248814
InterPro:IPR015607 PANTHER:PTHR11809:SF2 SUPFAM:SSF48300
TIGRFAMs:TIGR00855 RefSeq:XP_714802.1 RefSeq:XP_714864.1
ProteinModelPortal:Q59Z25 STRING:Q59Z25 GeneID:3643513
GeneID:3643593 KEGG:cal:CaO19.2275 KEGG:cal:CaO19.9815
Uniprot:Q59Z25
Length = 174
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 37/68 (54%), Positives = 45/68 (66%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
F +KLE +D +K KIIKEVK GL L ESK VE AP V+K+ V KE+A+KI L+
Sbjct: 107 FSIKLESFDAKSKPKIIKEVKGMLGLSLVESKKFVESAPKVLKENVAKEDAEKIKATLEG 166
Query: 162 LNAIVVLE 169
L A V LE
Sbjct: 167 LGAKVSLE 174
>POMBASE|SPCC4B3.09c [details] [associations]
symbol:SPCC4B3.09c "mitochondrial ribosomal protein
subunit L12 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISM]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISM] [GO:0006412
"translation" evidence=ISM] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
PomBase:SPCC4B3.09c EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005762 GO:GO:0003735 GO:GO:0032543 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 PIR:T50439 RefSeq:NP_588081.2
HSSP:P0A7K2 STRING:Q9USJ9 PRIDE:Q9USJ9 EnsemblFungi:SPCC4B3.09c.1
GeneID:2539530 eggNOG:COG0222 HOGENOM:HOG000248814
OrthoDB:EOG49CTJ7 NextBio:20800691 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 Uniprot:Q9USJ9
Length = 173
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 44/145 (30%), Positives = 70/145 (48%)
Query: 26 SSRSLCTVTESRTQKLERISDELLDLTKLERYDFATLLGCKLGLDRFXXXXXXXXXXXXX 85
S R+ +V + Q E + D++ L+ LE + L KL +
Sbjct: 30 SFRAAASVQNNNAQIGEMV-DKISSLSLLETSELVKQLKEKLNIAEIAPMAAVAPAVASA 88
Query: 86 XXXXXXX-XXXXXXXXXFDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIK 144
+++KLE +D +K K+IKEVK+ GL L ++K VE AP V+K
Sbjct: 89 APSEEKAPEEKKEEKTTWNLKLESFDAGSKAKVIKEVKSLLGLSLVDAKKFVESAPKVLK 148
Query: 145 KGVTKEEADKIVEKLKELNAIVVLE 169
+ + KE+A+ I KL++L+ VVLE
Sbjct: 149 ENILKEDAEAIKSKLEKLSCKVVLE 173
>FB|FBgn0011787 [details] [associations]
symbol:mRpL12 "mitochondrial ribosomal protein L12"
species:7227 "Drosophila melanogaster" [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] [GO:0016049 "cell growth" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IGI] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 EMBL:AE014296 GO:GO:0005811 GO:GO:0006412
GO:GO:0016049 GO:GO:0003682 GO:GO:0005762 GO:GO:0003735
GO:GO:0007005 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 GeneTree:ENSGT00390000000190 OMA:QKSVMEI CTD:6182
FlyBase:FBgn0011787 EMBL:AY060871 EMBL:AY075505
RefSeq:NP_001246688.1 RefSeq:NP_524742.1 UniGene:Dm.1433 SMR:Q9VSR5
IntAct:Q9VSR5 MINT:MINT-1720242 STRING:Q9VSR5
EnsemblMetazoa:FBtr0076511 GeneID:44326 KEGG:dme:Dmel_CG5012
UCSC:CG5012-RA InParanoid:Q9VSR5 GenomeRNAi:44326 NextBio:837172
Uniprot:Q9VSR5
Length = 182
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 42/132 (31%), Positives = 63/132 (47%)
Query: 40 KLERISDELLDLTKLERYDFATLLGCKLGLDRFXXXXXXXXXXXXXXXXXXXXXXX-XXX 98
KL+ I + + L LE + +TLL KL L
Sbjct: 51 KLDSIVNNIAALNLLEVAELSTLLKQKLNLPETAFAPQFAAGPARAAPAEDEEEAAPKKV 110
Query: 99 XXXFDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
F VKL K+D+ K+ +IKEVK G+ L ++K VE AP ++K+ + KEEA+K+ E
Sbjct: 111 QTSFKVKLVKFDEKQKVALIKEVKNLLEGMNLVQAKKFVESAPTIVKEDIPKEEAEKLKE 170
Query: 158 KLKELNAIVVLE 169
L + AI+ +E
Sbjct: 171 ALSKAGAIIEIE 182
>SGD|S000003036 [details] [associations]
symbol:MNP1 "Protein associated with the mitochondrial
nucleoid" species:4932 "Saccharomyces cerevisiae" [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0009060 "aerobic respiration" evidence=IMP]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
SGD:S000003036 HAMAP:MF_00368 EMBL:BK006941 GO:GO:0006412
GO:GO:0005840 GO:GO:0042645 GO:GO:0003735 GO:GO:0009060
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 OrthoDB:EOG49CTJ7
InterPro:IPR015607 PANTHER:PTHR11809:SF2 SUPFAM:SSF48300
EMBL:Z72591 PIR:S64075 RefSeq:NP_011447.1 ProteinModelPortal:P53163
SMR:P53163 DIP:DIP-6428N IntAct:P53163 MINT:MINT-705819
STRING:P53163 PaxDb:P53163 PeptideAtlas:P53163 EnsemblFungi:YGL068W
GeneID:852811 KEGG:sce:YGL068W CYGD:YGL068w
GeneTree:ENSGT00390000000190 OMA:GVAKPPN NextBio:972342
Genevestigator:P53163 GermOnline:YGL068W Uniprot:P53163
Length = 194
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
F VKL+ +D K K+IKEVK GL L E+K VE AP V+K+ V K++A+KI + L++
Sbjct: 127 FTVKLDSFDTKTKAKVIKEVKGLLGLSLVEAKKFVEAAPKVLKENVAKDDAEKIKKTLED 186
Query: 162 LNAIVVLE 169
L A V LE
Sbjct: 187 LGAKVSLE 194
>TIGR_CMR|BA_0100 [details] [associations]
symbol:BA_0100 "ribosomal protein L7/L12" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 ProtClustDB:PRK00157
RefSeq:NP_842668.1 RefSeq:YP_016704.1 RefSeq:YP_026386.1
ProteinModelPortal:Q81VU0 SMR:Q81VU0 DNASU:1085015
EnsemblBacteria:EBBACT00000011822 EnsemblBacteria:EBBACT00000013991
EnsemblBacteria:EBBACT00000024065 GeneID:1085015 GeneID:2818155
GeneID:2853126 KEGG:ban:BA_0100 KEGG:bar:GBAA_0100 KEGG:bat:BAS0100
OMA:EAVKNMT BioCyc:BANT260799:GJAJ-111-MONOMER
BioCyc:BANT261594:GJ7F-113-MONOMER Uniprot:Q81VU0
Length = 119
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
FDV+L A KIK+IK V+ TGLGLKE+K+LV+ P VIK+ KEEA++I KL+E
Sbjct: 53 FDVELTSAG-AQKIKVIKVVREITGLGLKEAKELVDNTPKVIKEAAAKEEAEEIKAKLEE 111
Query: 162 LNAIV 166
+ A V
Sbjct: 112 VGAAV 116
>TAIR|locus:2086435 [details] [associations]
symbol:RPL12-A "ribosomal protein L12-A" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015934 "large ribosomal subunit"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009295
"nucleoid" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0000311 "plastid large
ribosomal subunit" evidence=ISS] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
GO:GO:0009506 GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006412 GO:GO:0009941 GO:GO:0003735 GO:GO:0009535
GO:GO:0009295 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 EMBL:AP000371 eggNOG:COG0222 SUPFAM:SSF48300
EMBL:X68046 EMBL:AY054567 EMBL:AY056124 EMBL:AY136308 EMBL:BT000419
EMBL:BT006058 EMBL:BT006568 EMBL:Z17719 IPI:IPI00541602 PIR:A53394
RefSeq:NP_189421.1 UniGene:At.20381 UniGene:At.251
ProteinModelPortal:P36210 SMR:P36210 IntAct:P36210 STRING:P36210
PRIDE:P36210 ProMEX:P36210 EnsemblPlants:AT3G27830.1 GeneID:822403
KEGG:ath:AT3G27830 GeneFarm:74 TAIR:At3g27830 HOGENOM:HOG000248813
InParanoid:P36210 KO:K02935 OMA:TIDEMMS PhylomeDB:P36210
ProtClustDB:CLSN2685034 Genevestigator:P36210 GermOnline:AT3G27830
GO:GO:0000311 InterPro:IPR015608 PANTHER:PTHR11809:SF6
TIGRFAMs:TIGR00855 Uniprot:P36210
Length = 191
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 46/165 (27%), Positives = 74/165 (44%)
Query: 3 SVTIKFP-RLGRVFTTLKVTEAVTSSRSLCTVTESRTQKLERISDELLDLTKLERYDFAT 61
+ TI+FP R G ++ +T T R + V +K+E+I E+ LT E
Sbjct: 30 TTTIEFPSRFGGGSSST-LTHRATHLRPIAAV--EAPEKIEKIGSEISSLTLEEARILVD 86
Query: 62 LLGCKLGLDRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDVKLEKYDQAAKIKIIKEV 121
L K G+ FDV + + +++I +IK V
Sbjct: 87 YLQDKFGVSPLSLAPAAAAVAAPADGGAAAVVEEQTE---FDVVINEVPSSSRIAVIKAV 143
Query: 122 KTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKELNAIV 166
+ T L LKE+K+L+E P K+G+TK+EA++ + L+E A V
Sbjct: 144 RALTSLALKEAKELIEGLPKKFKEGITKDEAEEAKKTLEEAGAKV 188
>UNIPROTKB|P0A7K2 [details] [associations]
symbol:rplL species:83333 "Escherichia coli K-12"
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U00006 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0022625 EMBL:V00339 eggNOG:COG0222 SUPFAM:SSF48300
HOGENOM:HOG000248813 KO:K02935 TIGRFAMs:TIGR00855 PDB:3SGF PDB:3UOS
PDBsum:3SGF PDBsum:3UOS PDB:2GYA PDB:2GYC PDBsum:2GYA PDBsum:2GYC
ProtClustDB:PRK00157 OMA:EAVKNMT EMBL:M38301 PIR:S12575
RefSeq:NP_418413.1 RefSeq:YP_491475.1 PDB:1CTF PDB:1RQS PDB:1RQT
PDB:1RQU PDB:1RQV PDB:2BCW PDB:2XTG PDB:2XUX PDBsum:1CTF
PDBsum:1RQS PDBsum:1RQT PDBsum:1RQU PDBsum:1RQV PDBsum:2BCW
PDBsum:2XTG PDBsum:2XUX ProteinModelPortal:P0A7K2 SMR:P0A7K2
DIP:DIP-36009N IntAct:P0A7K2 MINT:MINT-1277405 PhosSite:P0810430
SWISS-2DPAGE:P0A7K2 PaxDb:P0A7K2 PRIDE:P0A7K2
EnsemblBacteria:EBESCT00000000836 EnsemblBacteria:EBESCT00000004740
EnsemblBacteria:EBESCT00000004741 EnsemblBacteria:EBESCT00000016504
GeneID:12930512 GeneID:948489 KEGG:ecj:Y75_p3211 KEGG:eco:b3986
PATRIC:32123493 EchoBASE:EB0866 EcoGene:EG10873
BioCyc:EcoCyc:EG10873-MONOMER BioCyc:ECOL316407:JW3949-MONOMER
EvolutionaryTrace:P0A7K2 Genevestigator:P0A7K2 Uniprot:P0A7K2
Length = 121
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
FDV L K A K+ +IK V+ TGLGLKE+KDLVE APA +K+GV+K++A+ + + L+E
Sbjct: 55 FDVIL-KAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEE 113
Query: 162 LNAIV 166
A V
Sbjct: 114 AGAEV 118
>TIGR_CMR|SPO_3509 [details] [associations]
symbol:SPO_3509 "ribosomal protein L7/L12" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300
HOGENOM:HOG000248813 KO:K02935 TIGRFAMs:TIGR00855
ProtClustDB:PRK00157 OMA:MADLKDF RefSeq:YP_168704.1
ProteinModelPortal:Q5LMQ4 SMR:Q5LMQ4 GeneID:3194266
KEGG:sil:SPO3509 PATRIC:23380489 Uniprot:Q5LMQ4
Length = 125
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 45/128 (35%), Positives = 64/128 (50%)
Query: 41 LERISDELLDLTKLERYDFATLLGCKLGLDRFXXXXXXXXXXXXXXXXXXXXXXXXXXXX 100
L+ +++ ++ LT LE + +L + G++
Sbjct: 4 LKALAESIVGLTLLEAQELKNILKDEYGIEP-----AAGGAVMVAAAGGDAGAAAEEEKT 58
Query: 101 XFDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
FDV L K A+KI +IKEV+ TGLGLKE+KDLVE A IK+GV K EA++I KL+
Sbjct: 59 EFDVVL-KNAGASKINVIKEVRGITGLGLKEAKDLVE-AGGKIKEGVAKAEAEEIKAKLE 116
Query: 161 ELNAIVVL 168
A V L
Sbjct: 117 AAGAEVEL 124
>DICTYBASE|DDB_G0274407 [details] [associations]
symbol:DDB_G0274407 "39S ribosomal protein L12,
mitochondrial" species:44689 "Dictyostelium discoideum" [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 dictyBase:DDB_G0274407
GO:GO:0006412 EMBL:AAFI02000012 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
SUPFAM:SSF48300 OMA:GVAKPPN eggNOG:NOG312691 RefSeq:XP_644221.1
ProteinModelPortal:Q86KA1 STRING:Q86KA1 EnsemblProtists:DDB0167610
GeneID:8619650 KEGG:ddi:DDB_G0274407 InParanoid:Q86KA1
ProtClustDB:CLSZ2431041 Uniprot:Q86KA1
Length = 182
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 45/151 (29%), Positives = 65/151 (43%)
Query: 16 TTLKVTEAVTSSRSLCTVTESRTQ-KLERISDELLDLTKLERYDFATLLGCKLGLDRFXX 74
T L TE + L T+ ++ ++ + + + L+ L+ D L KL +
Sbjct: 27 TRLFTTEPEKVNLKLTTIENGKSSTEVADLVERISKLSILDVMDLTQHLQKKLSIPDIDL 86
Query: 75 XXXXXXXXXXXXXXXXXXXXXXXXXXXFDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESK 133
F V+L K AK KIIKE++ L L E+K
Sbjct: 87 SSLGSGAPAGGAAPAAAAAPAAVAKTDFQVRLVKVPDGAKYKIIKELREVKPSLSLMETK 146
Query: 134 DLVEKAPAVIKKGVTKEEADKIVEKLKELNA 164
LVEK P+VI V+KEEA+KI+ KLK A
Sbjct: 147 GLVEKIPSVIADKVSKEEAEKIIAKLKASGA 177
>UNIPROTKB|P02394 [details] [associations]
symbol:rplL "50S ribosomal protein L7/L12" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AL009126
GenomeReviews:AL009126_GR Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 EMBL:D50303 ProtClustDB:PRK00157
EMBL:L24376 PIR:F69695 RefSeq:NP_387986.1 ProteinModelPortal:P02394
SMR:P02394 EnsemblBacteria:EBBACT00000003778 GeneID:935952
KEGG:bsu:BSU01050 PATRIC:18971719 GenoList:BSU01050 OMA:QKSVMEI
BioCyc:BSUB:BSU01050-MONOMER Uniprot:P02394
Length = 123
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 114 KIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKELNAIV 166
KIK+IK V+ TGLGLKE+K+LV+ P +K+G+ KEEA+++ KL+E+ A V
Sbjct: 68 KIKVIKVVREITGLGLKEAKELVDNTPKPLKEGIAKEEAEELKAKLEEVGASV 120
>TIGR_CMR|GSU_2864 [details] [associations]
symbol:GSU_2864 "ribosomal protein L7/L12" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:EAVKNMT
RefSeq:NP_953906.1 ProteinModelPortal:Q748Y5 SMR:Q748Y5
PRIDE:Q748Y5 GeneID:2686769 KEGG:gsu:GSU2864 PATRIC:22028579
BioCyc:GSUL243231:GH27-2845-MONOMER Uniprot:Q748Y5
Length = 127
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
FDV L K A KI +IK V+ TGLGLKE+KDLV+ AP +K GV+KEEA++ ++L E
Sbjct: 61 FDVIL-KSAGANKIGVIKVVRALTGLGLKEAKDLVDGAPKPVKNGVSKEEAEEAKKQLVE 119
Query: 162 LNAIVVLE 169
A V ++
Sbjct: 120 SGAEVEIK 127
>TIGR_CMR|CJE_0527 [details] [associations]
symbol:CJE_0527 "ribosomal protein L7/L12" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:EAVKNMT
RefSeq:YP_178545.1 ProteinModelPortal:Q5HVZ0 SMR:Q5HVZ0
STRING:Q5HVZ0 GeneID:3231288 KEGG:cjr:CJE0527 PATRIC:20042776
BioCyc:CJEJ195099:GJC0-542-MONOMER Uniprot:Q5HVZ0
Length = 125
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
FD+ L A KI++IK V+ TGLGLKE+KD VE+ P+ +K+GV K EA++ ++L+E
Sbjct: 59 FDIVLTD-GGAKKIEVIKIVRALTGLGLKEAKDAVEQTPSTLKEGVAKAEAEEAKKQLEE 117
Query: 162 LNAIVVLE 169
A V L+
Sbjct: 118 AGAKVELK 125
>TIGR_CMR|CHY_2320 [details] [associations]
symbol:CHY_2320 "ribosomal protein L7/L12" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 ProtClustDB:PRK00157
RefSeq:YP_361129.1 ProteinModelPortal:Q3A9Q5 SMR:Q3A9Q5
STRING:Q3A9Q5 GeneID:3728067 KEGG:chy:CHY_2320 PATRIC:21277707
OMA:MADLKDF BioCyc:CHYD246194:GJCN-2319-MONOMER Uniprot:Q3A9Q5
Length = 127
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
FDV L A K+ +IK V+ TGLGLKESKDLV+ AP +K+ V+K +A+ I KL+E
Sbjct: 61 FDVILVS-PGAQKVNVIKVVREITGLGLKESKDLVDGAPKPVKEKVSKADAEAIKAKLEE 119
Query: 162 LNAIVVLE 169
+ A V ++
Sbjct: 120 VGATVEIK 127
>TAIR|locus:2086450 [details] [associations]
symbol:RPL12-C "ribosomal protein L12-C" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015934 "large ribosomal subunit"
evidence=ISS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IEP] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0000311 "plastid large ribosomal subunit"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 GO:GO:0009570
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0042742
GO:GO:0003735 GO:GO:0009535 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 EMBL:AP000371 eggNOG:COG0222 SUPFAM:SSF48300
EMBL:X68046 UniGene:At.20381 UniGene:At.251 HOGENOM:HOG000248813
KO:K02935 ProtClustDB:CLSN2685034 GO:GO:0000311 InterPro:IPR015608
PANTHER:PTHR11809:SF6 TIGRFAMs:TIGR00855 EMBL:AY037241
EMBL:AY136300 EMBL:AY143956 IPI:IPI00540051 PIR:C53394
RefSeq:NP_189423.1 UniGene:At.71465 ProteinModelPortal:P36212
SMR:P36212 STRING:P36212 EnsemblPlants:AT3G27850.1 GeneID:822405
KEGG:ath:AT3G27850 GeneFarm:78 TAIR:At3g27850 InParanoid:P36212
OMA:SHRAINL PhylomeDB:P36212 Genevestigator:P36212
GermOnline:AT3G27850 Uniprot:P36212
Length = 187
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 36/128 (28%), Positives = 58/128 (45%)
Query: 39 QKLERISDELLDLTKLERYDFATLLGCKLGLDRFXXXXXXXXXXXXXXXXXXXXXXXXXX 98
+K+E+I E+ LT E L K G+
Sbjct: 60 EKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGGAAAVVEEQTE 119
Query: 99 XXXFDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEK 158
FDV + + +++I +IK V+ T L LKE+K+L+E P K+G+TK+EA++ +
Sbjct: 120 ---FDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAKKT 176
Query: 159 LKELNAIV 166
L+E A V
Sbjct: 177 LEEAGAKV 184
>UNIPROTKB|E1C3B6 [details] [associations]
symbol:MRPL12 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0006390
"transcription from mitochondrial promoter" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 GO:GO:0045893 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 GeneTree:ENSGT00390000000190 GO:GO:0006390
OMA:MYCTRYC EMBL:AADN02053585 IPI:IPI00583893
Ensembl:ENSGALT00000011655 NextBio:20919270 Uniprot:E1C3B6
Length = 194
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 32/69 (46%), Positives = 42/69 (60%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V+L + K+K+IKEVK F G+ L ++K LVE P IK V+KEEA+KI L+
Sbjct: 126 FSVRLTELKATDKVKLIKEVKNFVPGINLVQAKKLVESLPQEIKANVSKEEAEKIKTALE 185
Query: 161 ELNAIVVLE 169
VVLE
Sbjct: 186 AAGGTVVLE 194
>UNIPROTKB|Q9KV31 [details] [associations]
symbol:rplL "50S ribosomal protein L7/L12" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:EAVKNMT PIR:E82336
RefSeq:NP_229981.1 ProteinModelPortal:Q9KV31 SMR:Q9KV31
DNASU:2615093 GeneID:2615093 KEGG:vch:VC0327 PATRIC:20079711
Uniprot:Q9KV31
Length = 121
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 28/55 (50%), Positives = 41/55 (74%)
Query: 112 AAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKELNAIV 166
A K+ +IK V+ TGLGLKE+K LV+ APA +K+ V+KEEA+ + ++L+E A V
Sbjct: 64 ANKVAVIKAVRGATGLGLKEAKALVDGAPASVKEAVSKEEAEALKKELEEAGATV 118
>TIGR_CMR|DET_0990 [details] [associations]
symbol:DET_0990 "ribosomal protein L7/L12" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
OMA:TIDEMMS TIGRFAMs:TIGR00855 ProtClustDB:PRK00157
RefSeq:YP_181713.1 ProteinModelPortal:Q3Z7T6 SMR:Q3Z7T6
STRING:Q3Z7T6 GeneID:3229746 KEGG:det:DET0990 PATRIC:21609029
BioCyc:DETH243164:GJNF-991-MONOMER Uniprot:Q3Z7T6
Length = 124
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
F+V L+ A KI +IK V+ T LGLKE+KD+VE AP +K+ V+KEEAD + L+
Sbjct: 58 FNVILKDVG-ANKINVIKAVRELTSLGLKEAKDMVEAAPKAVKENVSKEEADAAKKALEA 116
Query: 162 LNAIVVLE 169
A + ++
Sbjct: 117 AGATIEIK 124
>TIGR_CMR|VC_0327 [details] [associations]
symbol:VC_0327 "ribosomal protein L7/L12" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:EAVKNMT PIR:E82336
RefSeq:NP_229981.1 ProteinModelPortal:Q9KV31 SMR:Q9KV31
DNASU:2615093 GeneID:2615093 KEGG:vch:VC0327 PATRIC:20079711
Uniprot:Q9KV31
Length = 121
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 28/55 (50%), Positives = 41/55 (74%)
Query: 112 AAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKELNAIV 166
A K+ +IK V+ TGLGLKE+K LV+ APA +K+ V+KEEA+ + ++L+E A V
Sbjct: 64 ANKVAVIKAVRGATGLGLKEAKALVDGAPASVKEAVSKEEAEALKKELEEAGATV 118
>TIGR_CMR|CPS_4770 [details] [associations]
symbol:CPS_4770 "ribosomal protein L7/L12" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
TIGRFAMs:TIGR00855 RefSeq:YP_271414.1 ProteinModelPortal:Q47UV8
SMR:Q47UV8 STRING:Q47UV8 PRIDE:Q47UV8 GeneID:3520350
KEGG:cps:CPS_4770 PATRIC:21472357 OMA:TMDLTEI
BioCyc:CPSY167879:GI48-4776-MONOMER Uniprot:Q47UV8
Length = 119
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
F+V + + + K+ +IK V+ TGLGLKE+KDLVE V+K+GV K EA+++ + L+E
Sbjct: 54 FNVVMTSFGEK-KVAVIKAVRGATGLGLKEAKDLVESL-GVVKEGVEKAEAEELKKTLEE 111
Query: 162 LNAIVVLE 169
A V ++
Sbjct: 112 AGASVEIK 119
>TIGR_CMR|SO_0223 [details] [associations]
symbol:SO_0223 "ribosomal protein L7/L12" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:TMDLTEI
RefSeq:NP_715863.1 ProteinModelPortal:Q8EK75 SMR:Q8EK75
PRIDE:Q8EK75 GeneID:1168106 KEGG:son:SO_0223 PATRIC:23520139
Uniprot:Q8EK75
Length = 122
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 25/56 (44%), Positives = 40/56 (71%)
Query: 114 KIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKELNAIVVLE 169
K+ +IK ++ TGLGLKE+K + E AP +K+GV+KEEA+ + ++L E A V ++
Sbjct: 67 KVAVIKAIRGATGLGLKEAKAMSEAAPVAVKEGVSKEEAEALKKELVEAGASVEIK 122
>GENEDB_PFALCIPARUM|PFE1225w [details] [associations]
symbol:PFE1225w "50S ribosomal subunit protein
L12, putative" species:5833 "Plasmodium falciparum" [GO:0015934
"large ribosomal subunit" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0003735 EMBL:AL844504 GO:GO:0015934
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0020011 SUPFAM:SSF48300 RefSeq:XP_001351802.1 HSSP:P29396
ProteinModelPortal:Q8I3L9 IntAct:Q8I3L9 MINT:MINT-1562958
PRIDE:Q8I3L9 EnsemblProtists:PFE1225w:mRNA GeneID:813060
KEGG:pfa:PFE1225w EuPathDB:PlasmoDB:PF3D7_0524600
HOGENOM:HOG000212571 ProtClustDB:CLSZ2432046 Uniprot:Q8I3L9
Length = 257
Score = 113 (44.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 30/69 (43%), Positives = 39/69 (56%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
+D+ LE + KI IIK VK L LK++KDLV+ P + + V KE ADK KL
Sbjct: 189 YDLILENIEPNKKIPIIKIVKEIKKDLNLKQAKDLVDNLPQTLFEKVNKETADKWKTKLT 248
Query: 161 ELNAIVVLE 169
E IV L+
Sbjct: 249 EAGGIVKLK 257
Score = 35 (17.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 37 RTQKLERISDELLDLTKLERYDFATLLGCKLGLD 70
++ K++ I + L +LT LE + + +D
Sbjct: 122 KSSKVDEIIESLKNLTLLEASELVKKIELTFSVD 155
>UNIPROTKB|Q8I3L9 [details] [associations]
symbol:PFE1225w "Organelle ribosomal protein L7/L12,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0015934
"large ribosomal subunit" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0003735 EMBL:AL844504 GO:GO:0015934
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0020011 SUPFAM:SSF48300 RefSeq:XP_001351802.1 HSSP:P29396
ProteinModelPortal:Q8I3L9 IntAct:Q8I3L9 MINT:MINT-1562958
PRIDE:Q8I3L9 EnsemblProtists:PFE1225w:mRNA GeneID:813060
KEGG:pfa:PFE1225w EuPathDB:PlasmoDB:PF3D7_0524600
HOGENOM:HOG000212571 ProtClustDB:CLSZ2432046 Uniprot:Q8I3L9
Length = 257
Score = 113 (44.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 30/69 (43%), Positives = 39/69 (56%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
+D+ LE + KI IIK VK L LK++KDLV+ P + + V KE ADK KL
Sbjct: 189 YDLILENIEPNKKIPIIKIVKEIKKDLNLKQAKDLVDNLPQTLFEKVNKETADKWKTKLT 248
Query: 161 ELNAIVVLE 169
E IV L+
Sbjct: 249 EAGGIVKLK 257
Score = 35 (17.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 37 RTQKLERISDELLDLTKLERYDFATLLGCKLGLD 70
++ K++ I + L +LT LE + + +D
Sbjct: 122 KSSKVDEIIESLKNLTLLEASELVKKIELTFSVD 155
>UNIPROTKB|Q7YR75 [details] [associations]
symbol:MRPL12 "39S ribosomal protein L12, mitochondrial"
species:9913 "Bos taurus" [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 HOGENOM:HOG000248814 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 PDB:2FTC PDBsum:2FTC
EMBL:AB116379 EMBL:BT020735 EMBL:BT020755 EMBL:BT020982
EMBL:BT030597 EMBL:BC134767 IPI:IPI00691477 RefSeq:NP_963900.1
UniGene:Bt.8177 ProteinModelPortal:Q7YR75 STRING:Q7YR75
PRIDE:Q7YR75 GeneID:399560 KEGG:bta:399560 CTD:6182
eggNOG:NOG312691 HOVERGEN:HBG001832 OrthoDB:EOG4R5044
EvolutionaryTrace:Q7YR75 NextBio:20816606 Uniprot:Q7YR75
Length = 198
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V+L + K+K+IKE+K + G+ L ++K LVE P IK V K EA+KI L+
Sbjct: 130 FTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALE 189
Query: 161 ELNAIVVLE 169
+ VVLE
Sbjct: 190 AVGGTVVLE 198
>UNIPROTKB|P52827 [details] [associations]
symbol:MRPL12 "39S ribosomal protein L12, mitochondrial"
species:10034 "Cricetus cricetus" [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISS] InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 HOVERGEN:HBG001832
EMBL:X79864 ProteinModelPortal:P52827 PRIDE:P52827 Uniprot:P52827
Length = 203
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V+L + K+K+IKE+K + G+ L ++K LVE P IK V K EA+KI L+
Sbjct: 135 FTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALE 194
Query: 161 ELNAIVVLE 169
+ VVLE
Sbjct: 195 AVGGTVVLE 203
>MGI|MGI:1926273 [details] [associations]
symbol:Mrpl12 "mitochondrial ribosomal protein L12"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005761
"mitochondrial ribosome" evidence=ISS] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006390 "transcription from mitochondrial
promoter" evidence=ISO] [GO:0006412 "translation" evidence=ISS]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 MGI:MGI:1926273 GO:GO:0045893 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 EMBL:AL669855 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 HOGENOM:HOG000248814
InterPro:IPR015607 PANTHER:PTHR11809:SF2 SUPFAM:SSF48300
GeneTree:ENSGT00390000000190 GO:GO:0006390 CTD:6182
eggNOG:NOG312691 HOVERGEN:HBG001832 OrthoDB:EOG4R5044 EMBL:AK005328
EMBL:AK028168 EMBL:AK134816 EMBL:AK166969 EMBL:AK168337
EMBL:BC005712 EMBL:BC019565 IPI:IPI00118963 RefSeq:NP_081480.2
UniGene:Mm.133851 ProteinModelPortal:Q9DB15 SMR:Q9DB15
IntAct:Q9DB15 STRING:Q9DB15 PhosphoSite:Q9DB15 PaxDb:Q9DB15
PRIDE:Q9DB15 Ensembl:ENSMUST00000043627 GeneID:56282 KEGG:mmu:56282
UCSC:uc007mta.1 InParanoid:B1ATZ3 OMA:MYCTRYC ChiTaRS:MRPL12
NextBio:312184 Bgee:Q9DB15 CleanEx:MM_MRPL12 Genevestigator:Q9DB15
GermOnline:ENSMUSG00000039640 Uniprot:Q9DB15
Length = 201
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V+L + K+K+IKE+K + G+ L ++K LVE P IK V K EA+KI L+
Sbjct: 133 FTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALE 192
Query: 161 ELNAIVVLE 169
+ VVLE
Sbjct: 193 AVGGTVVLE 201
>UNIPROTKB|E2QVI3 [details] [associations]
symbol:MRPL12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 CTD:6182 RefSeq:XP_850016.1
Ensembl:ENSCAFT00000009364 GeneID:608030 KEGG:cfa:608030
NextBio:20893711 Uniprot:E2QVI3
Length = 198
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V+L + K+K+IKE+K + G+ L ++K LVE P IK V K EA+KI L+
Sbjct: 130 FTVRLTEAKPVDKVKLIKEIKNYIPGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALE 189
Query: 161 ELNAIVVLE 169
+ VVLE
Sbjct: 190 AVGGTVVLE 198
>UNIPROTKB|P52815 [details] [associations]
symbol:MRPL12 "39S ribosomal protein L12, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006390 "transcription from mitochondrial promoter"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0045893
GO:GO:0006412 GO:GO:0003723 GO:GO:0005762 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
HOGENOM:HOG000248814 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 GO:GO:0006390 CTD:6182 eggNOG:NOG312691
HOVERGEN:HBG001832 OrthoDB:EOG4R5044 EMBL:X79865 EMBL:AF059736
EMBL:BC002344 EMBL:BC007497 EMBL:AF105278 IPI:IPI01015060
RefSeq:NP_002940.2 UniGene:Hs.109059 ProteinModelPortal:P52815
SMR:P52815 DIP:DIP-50865N IntAct:P52815 MINT:MINT-1150069
STRING:P52815 PhosphoSite:P52815 DMDM:20981709
DOSAC-COBS-2DPAGE:P52815 SWISS-2DPAGE:P52815 PaxDb:P52815
PeptideAtlas:P52815 PRIDE:P52815 Ensembl:ENST00000333676
GeneID:6182 KEGG:hsa:6182 UCSC:uc002kbh.2 GeneCards:GC17P079670
HGNC:HGNC:10378 HPA:HPA022853 HPA:HPA023043 MIM:602375
neXtProt:NX_P52815 PharmGKB:PA30941 InParanoid:P52815
PhylomeDB:P52815 GenomeRNAi:6182 NextBio:24005 ArrayExpress:P52815
Bgee:P52815 CleanEx:HS_MRPL12 Genevestigator:P52815
GermOnline:ENSG00000183093 Uniprot:P52815
Length = 198
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V+L + K+K+IKE+K + G+ L ++K LVE P IK V K EA+KI L+
Sbjct: 130 FTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALE 189
Query: 161 ELNAIVVLE 169
+ VVLE
Sbjct: 190 AVGGTVVLE 198
>RGD|1588559 [details] [associations]
symbol:Mrpl12 "mitochondrial ribosomal protein L12"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IEA;ISO] [GO:0006390 "transcription from mitochondrial
promoter" evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 RGD:1588559 GO:GO:0045893
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 GeneTree:ENSGT00390000000190
GO:GO:0006390 CTD:6182 OrthoDB:EOG4R5044 IPI:IPI00203773
RefSeq:NP_001025071.1 Ensembl:ENSRNOT00000054965 GeneID:303746
KEGG:rno:303746 OMA:DNTPKEY Uniprot:D3ZXF9
Length = 276
Score = 126 (49.4 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V+L + K+K+IKE+K + G+ L ++K LVE P IK V K EA+KI L+
Sbjct: 208 FTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALE 267
Query: 161 ELNAIVVLE 169
+ VVLE
Sbjct: 268 AVGGTVVLE 276
>WB|WBGene00012361 [details] [associations]
symbol:mrpl-12 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 GO:GO:0008340 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 GeneTree:ENSGT00390000000190
OMA:GVAKPPN EMBL:Z93785 PIR:T26299 RefSeq:NP_499360.1 HSSP:P02392
ProteinModelPortal:O18180 SMR:O18180 DIP:DIP-25893N IntAct:O18180
MINT:MINT-227711 STRING:O18180 PaxDb:O18180 EnsemblMetazoa:W09D10.3
GeneID:176495 KEGG:cel:CELE_W09D10.3 UCSC:W09D10.3 CTD:176495
WormBase:W09D10.3 InParanoid:O18180 NextBio:892818 Uniprot:O18180
Length = 173
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKT-FTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F VKL K+D KI IIKE++ GL L ++K VE AP +K+ + K EAD++ L+
Sbjct: 105 FTVKLTKFDDTKKIAIIKEIRNAIPGLNLVQAKKFVETAPVNVKEDLGKAEADELKAILE 164
Query: 161 ELNAIV 166
+ A +
Sbjct: 165 KAGATI 170
>UNIPROTKB|O18180 [details] [associations]
symbol:mrpl-12 "Protein MRPL-12" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 GO:GO:0008340 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 GeneTree:ENSGT00390000000190
OMA:GVAKPPN EMBL:Z93785 PIR:T26299 RefSeq:NP_499360.1 HSSP:P02392
ProteinModelPortal:O18180 SMR:O18180 DIP:DIP-25893N IntAct:O18180
MINT:MINT-227711 STRING:O18180 PaxDb:O18180 EnsemblMetazoa:W09D10.3
GeneID:176495 KEGG:cel:CELE_W09D10.3 UCSC:W09D10.3 CTD:176495
WormBase:W09D10.3 InParanoid:O18180 NextBio:892818 Uniprot:O18180
Length = 173
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKT-FTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F VKL K+D KI IIKE++ GL L ++K VE AP +K+ + K EAD++ L+
Sbjct: 105 FTVKLTKFDDTKKIAIIKEIRNAIPGLNLVQAKKFVETAPVNVKEDLGKAEADELKAILE 164
Query: 161 ELNAIV 166
+ A +
Sbjct: 165 KAGATI 170
>TIGR_CMR|ECH_0953 [details] [associations]
symbol:ECH_0953 "ribosomal protein L7/L12" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 RefSeq:YP_507741.1
ProteinModelPortal:Q2GFP2 STRING:Q2GFP2 GeneID:3927893
KEGG:ech:ECH_0953 PATRIC:20577288 OMA:IESFKEM
BioCyc:ECHA205920:GJNR-956-MONOMER Uniprot:Q2GFP2
Length = 133
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEK--APAVIK-KGVTKEEADKIVEK 158
F V E Y KI +IK V+ T LGLKE+K+ VEK A +I+ K KEEA++I +K
Sbjct: 63 FSVVFESYAADKKISVIKAVRECTSLGLKEAKEFVEKEGAKELIEGKKYKKEEAEEIKKK 122
Query: 159 LKELNAIVVLE 169
L++ A V ++
Sbjct: 123 LEDAGAKVSIK 133
>TAIR|locus:2086440 [details] [associations]
symbol:RPL12-B "ribosomal protein L12-B" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS;TAS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0015934 "large ribosomal subunit" evidence=ISS]
[GO:0006354 "DNA-dependent transcription, elongation" evidence=RCA]
[GO:0000311 "plastid large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
EMBL:AP000371 SUPFAM:SSF48300 EMBL:X68046 HOGENOM:HOG000248813
KO:K02935 ProtClustDB:CLSN2685034 GO:GO:0000311 InterPro:IPR015608
PANTHER:PTHR11809:SF6 TIGRFAMs:TIGR00855 IPI:IPI00536282 PIR:B53394
RefSeq:NP_189422.1 UniGene:At.53525 ProteinModelPortal:P36211
SMR:P36211 STRING:P36211 EnsemblPlants:AT3G27840.1 GeneID:822404
KEGG:ath:AT3G27840 GeneFarm:75 TAIR:At3g27840 eggNOG:KOG1715
InParanoid:P36211 OMA:YLHPISA PhylomeDB:P36211
Genevestigator:P36211 GermOnline:AT3G27840 Uniprot:P36211
Length = 193
Score = 117 (46.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
FDV + + +I +I ++ T L L ESK+L+E P K+GVTK+EA++ +L+E
Sbjct: 126 FDVVINDVPRGNRIAVITAIRAMTSLSLSESKELIEGFPKKFKEGVTKDEAEEDKTQLEE 185
Query: 162 LNAIV 166
A V
Sbjct: 186 AGAKV 190
>UNIPROTKB|P0A5V2 [details] [associations]
symbol:rplL "50S ribosomal protein L7/L12" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 GO:GO:0005829 GO:GO:0005886 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0005840 EMBL:BX842574
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:MADLKDF
PIR:A70615 RefSeq:NP_215166.1 RefSeq:NP_335092.1
RefSeq:YP_006513993.1 ProteinModelPortal:P0A5V2 SMR:P0A5V2
PRIDE:P0A5V2 EnsemblBacteria:EBMYCT00000002119
EnsemblBacteria:EBMYCT00000072683 GeneID:13318538 GeneID:888078
GeneID:925964 KEGG:mtc:MT0681 KEGG:mtu:Rv0652 KEGG:mtv:RVBD_0652
PATRIC:18123219 TubercuList:Rv0652 Uniprot:P0A5V2
Length = 130
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 31/69 (44%), Positives = 42/69 (60%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTF-TGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
FDV LE KI +IK V+ +GLGLKE+KDLV+ AP + + V KE AD+ KL+
Sbjct: 63 FDVILEAAGDK-KIGVIKVVREIVSGLGLKEAKDLVDGAPKPLLEKVAKEAADEAKAKLE 121
Query: 161 ELNAIVVLE 169
A V ++
Sbjct: 122 AAGATVTVK 130
>UNIPROTKB|A5PJ86 [details] [associations]
symbol:MRPL12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 GeneTree:ENSGT00670000098021 HOGENOM:HOG000248814
InterPro:IPR015607 PANTHER:PTHR11809:SF2 SUPFAM:SSF48300
IPI:IPI00691477 UniGene:Bt.8177 HOVERGEN:HBG001832
EMBL:DAAA02049420 EMBL:BC142005 STRING:A5PJ86
Ensembl:ENSBTAT00000053193 InParanoid:A5PJ86 Uniprot:A5PJ86
Length = 226
Score = 113 (44.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V+L + K+K+IKE+K + G+ L ++K LVE P IK V K EA+KI L+
Sbjct: 130 FTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALE 189
Query: 161 ELNAIV 166
+ V
Sbjct: 190 AVGGTV 195
>TIGR_CMR|APH_1025 [details] [associations]
symbol:APH_1025 "ribosomal protein L7/L12" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935 OMA:TIDEMMS
TIGRFAMs:TIGR00855 RefSeq:YP_505584.1 ProteinModelPortal:Q2GJ67
STRING:Q2GJ67 GeneID:3930610 KEGG:aph:APH_1025 PATRIC:20950800
eggNOG:NOG115730 ProtClustDB:PRK00157
BioCyc:APHA212042:GHPM-1032-MONOMER Uniprot:Q2GJ67
Length = 134
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFTGLGLKESKDLVEKAPA--VIK-KGVTKEEADKIVEK 158
F V + Y KI +IK V+ T LGLKE+KD VE+ + +I+ K K EA+++ +K
Sbjct: 64 FIVMFDGYAADKKIAVIKAVRECTSLGLKEAKDFVEQEGSRELIEGKKYKKAEAEEVKKK 123
Query: 159 LKELNAIVVLE 169
L++ A V L+
Sbjct: 124 LEDAGAQVSLK 134
>UNIPROTKB|H9KUU7 [details] [associations]
symbol:LOC100848134 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0015291 "secondary active transmembrane
transporter activity" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006839
"mitochondrial transport" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002030 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 PRINTS:PR00784 ProDom:PD001326 Pfam:PF00153
GO:GO:0016021 GO:GO:0005743 GO:GO:0006412 GO:GO:0005840
GO:GO:0015291 GO:GO:0003735 Gene3D:1.50.40.10 InterPro:IPR018108
InterPro:IPR023395 SUPFAM:SSF103506 PROSITE:PS50920 GO:GO:0006839
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GeneTree:ENSGT00670000098021 SUPFAM:SSF48300 EMBL:DAAA02049420
Ensembl:ENSBTAT00000000534 Uniprot:H9KUU7
Length = 442
Score = 110 (43.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V+L + K+K+IKE+K + G+ L ++K LVE P IK V K EA+KI L+
Sbjct: 130 FTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALE 189
>UNIPROTKB|F6XRN5 [details] [associations]
symbol:MRPL12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0006839
"mitochondrial transport" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002030 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 PRINTS:PR00784 ProDom:PD001326 Pfam:PF00153
GO:GO:0016021 GO:GO:0031966 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.50.40.10 InterPro:IPR018108
InterPro:IPR023395 SUPFAM:SSF103506 PROSITE:PS50920 GO:GO:0006839
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GeneTree:ENSGT00670000098021 SUPFAM:SSF48300
Ensembl:ENSCAFT00000009364 EMBL:AAEX03006169 OMA:GGCATIL
Uniprot:F6XRN5
Length = 442
Score = 109 (43.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V+L + K+K+IKE+K + G+ L ++K LVE P IK V K EA+KI L+
Sbjct: 130 FTVRLTEAKPVDKVKLIKEIKNYIPGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALE 189
>UNIPROTKB|B4DLN1 [details] [associations]
symbol:SLC25A10 "Uncharacterized protein" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0006839 "mitochondrial transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR002030
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 PRINTS:PR00784
ProDom:PD001326 Pfam:PF00153 GO:GO:0016021 GO:GO:0005739
GO:GO:0005634 GO:GO:0031966 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.50.40.10 InterPro:IPR018108
InterPro:IPR023395 SUPFAM:SSF103506 PROSITE:PS50920 GO:GO:0006839
Gene3D:3.30.1390.10 InterPro:IPR014719 HGNC:HGNC:10980
ChiTaRS:SLC25A10 SUPFAM:SSF48300 EMBL:AC139530 EMBL:AK297076
IPI:IPI00005537 SMR:B4DLN1 STRING:B4DLN1 Ensembl:ENST00000541223
Ensembl:ENST00000571730 UCSC:uc010wut.2 Uniprot:B4DLN1
Length = 442
Score = 109 (43.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKTFT-GLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V+L + K+K+IKE+K + G+ L ++K LVE P IK V K EA+KI L+
Sbjct: 130 FTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALE 189
>ZFIN|ZDB-GENE-050417-187 [details] [associations]
symbol:mrpl12 "mitochondrial ribosomal protein L12"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
Pfam:PF00153 ZFIN:ZDB-GENE-050417-187 GO:GO:0016021 GO:GO:0006412
GO:GO:0006810 GO:GO:0005840 GO:GO:0003735 Gene3D:1.50.40.10
InterPro:IPR018108 InterPro:IPR023395 SUPFAM:SSF103506
PROSITE:PS50920 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 GeneTree:ENSGT00670000098021 EMBL:CU570772
IPI:IPI00995732 Ensembl:ENSDART00000109544 ArrayExpress:F1QDE0
Bgee:F1QDE0 Uniprot:F1QDE0
Length = 412
Score = 104 (41.7 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 102 FDVKLEKYDQAAKIKIIKEVKT-FTGLGLKE---SKDLVEKAPAVIKKGVTKEEADKIVE 157
F +KL ++ A K+K+IKEVK G+ L + +K LVE P I+ ++K+EA+K+
Sbjct: 96 FTIKLTEFKAADKVKLIKEVKNCMEGINLVQQLQAKKLVESLPQEIRTNISKDEAEKLKS 155
Query: 158 KLK 160
L+
Sbjct: 156 ALE 158
>TIGR_CMR|NSE_0679 [details] [associations]
symbol:NSE_0679 "ribosomal protein L7/L12" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000237
GenomeReviews:CP000237_GR Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 HOGENOM:HOG000248814 SUPFAM:SSF48300 KO:K02935
RefSeq:YP_506557.1 ProteinModelPortal:Q2GD89 STRING:Q2GD89
GeneID:3931550 KEGG:nse:NSE_0679 PATRIC:22681377 eggNOG:NOG270725
OMA:AECEPEL ProtClustDB:CLSK2528102
BioCyc:NSEN222891:GHFU-693-MONOMER Uniprot:Q2GD89
Length = 137
Score = 92 (37.4 bits), Expect = 0.00071, P = 0.00071
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 107 EKYDQAAK-IKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLKE 161
EK A K +K I + + +GLKE KD VE P + G+TKE+AD + LKE
Sbjct: 72 EKKTNAIKALKTIFKQELGQDMGLKELKDKVEAVPVDVLSGLTKEKADAYAKILKE 127
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.355 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 169 140 0.00091 102 3 10 22 0.44 31
30 0.46 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 49
No. of states in DFA: 547 (58 KB)
Total size of DFA: 134 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.44u 0.09s 19.53t Elapsed: 00:00:01
Total cpu time: 19.44u 0.10s 19.54t Elapsed: 00:00:01
Start: Fri May 10 04:08:28 2013 End: Fri May 10 04:08:29 2013