BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030926
(169 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6LKB9|RL7_THEM4 50S ribosomal protein L7/L12 OS=Thermosipho melanesiensis (strain
BI429 / DSM 12029) GN=rplL PE=3 SV=1
Length = 129
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 79/133 (59%), Gaps = 9/133 (6%)
Query: 39 QKLERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETKAAE 98
+KLE+I +E+ LT E + + K G+ PV+ + P A + A E
Sbjct: 2 EKLEQIVNEIEQLTVAELAELVKMLEDKFGVSASAPVM-----AMPVAGAAAGGGAAAEE 56
Query: 99 KTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKA---PAVIKKGVTKEEADKI 155
KT FDV L+ + A KI +IK V+ TGLGLKE+KDLVEKA AVIK+GV K+EA++I
Sbjct: 57 KTEFDVVLKSFG-AKKINVIKVVREITGLGLKEAKDLVEKAGTPDAVIKQGVNKDEAEEI 115
Query: 156 VEKLKELNAIVVL 168
+KL+E A V L
Sbjct: 116 KKKLEEAGAEVEL 128
>sp|Q1XDE8|RK12_PORYE 50S ribosomal protein L12, chloroplastic OS=Porphyra yezoensis
GN=rpl12 PE=3 SV=1
Length = 129
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 78/134 (58%), Gaps = 10/134 (7%)
Query: 38 TQKLERISDELLDLTKLERYDFATLFGCKLGLDRF---GPVVPAFPSSGPAASGSTSAET 94
+ K+E I +EL L LE + +D G ++ A P+S PA SAE
Sbjct: 2 STKVENILEELKSLNLLEAAELVNTIEETFDVDASAASGGMMMATPTSAPA-----SAEV 56
Query: 95 KAAEKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADK 154
+ EKT FDV LE+ KI ++K V+ TGLGLKE+KDLVE P V+K+G +K++A+
Sbjct: 57 E--EKTEFDVVLEEVPAPKKISVLKVVRPLTGLGLKEAKDLVESTPKVLKEGASKDDAET 114
Query: 155 IVEKLKELNAIVVL 168
+ ++L++ A V++
Sbjct: 115 MKKQLEDAGATVIV 128
>sp|B3EER1|RL7_CHLL2 50S ribosomal protein L7/L12 OS=Chlorobium limicola (strain DSM 245
/ NBRC 103803) GN=rplL PE=3 SV=1
Length = 125
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 6/128 (4%)
Query: 41 LERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETKAAEKT 100
+E + +E+ LT E + K G+ +V S+ PA G A+ EKT
Sbjct: 3 IETLVEEIGKLTLTEASELVKALEEKFGVSAAPAIVAGIASAAPA--GDAPAQE---EKT 57
Query: 101 AFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
FDV L + +KI +IK V+ TGLGLKE+KDLV+ AP +K+ V+K+EA+KI ++LK
Sbjct: 58 EFDVVLTSAGE-SKINVIKVVRALTGLGLKEAKDLVDGAPKTVKEAVSKDEAEKIAKELK 116
Query: 161 ELNAIVVL 168
++ A V L
Sbjct: 117 DVGAGVEL 124
>sp|P53163|MNP1_YEAST 54S ribosomal protein L12, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MNP1 PE=1
SV=1
Length = 194
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 81 SSGPAASGSTSAETKAAEKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAP 140
S+G A SG+ E K KT F VKL+ +D TK K+IKEVK GL L E+K VE AP
Sbjct: 107 STGEAGSGA-EEEAKPEAKTVFTVKLDSFDTKTKAKVIKEVKGLLGLSLVEAKKFVEAAP 165
Query: 141 AVIKKGVTKEEADKIVEKLKELNAIVVLE 169
V+K+ V K++A+KI + L++L A V LE
Sbjct: 166 KVLKENVAKDDAEKIKKTLEDLGAKVSLE 194
>sp|Q4L3K1|RL7_STAHJ 50S ribosomal protein L7/L12 OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=rplL PE=3 SV=1
Length = 122
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV+L ++KIK++K VK TGLGLK++K+LV+ AP VIK+GV KEEA+K+ E
Sbjct: 52 EKTEFDVELTSAG-SSKIKVVKAVKEATGLGLKDAKELVDNAPKVIKEGVAKEEAEKLKE 110
Query: 158 KLKELNAIVVL 168
+L+E+ A V L
Sbjct: 111 QLEEVGATVEL 121
>sp|A5FZX2|RL7_ACICJ 50S ribosomal protein L7/L12 OS=Acidiphilium cryptum (strain JF-5)
GN=rplL PE=3 SV=1
Length = 127
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT F+V L K KI +IKE++T TGLGLKE+KDLVE AP +K+GV K+EA+KI +
Sbjct: 57 EKTEFNVIL-KSSGDKKINVIKEIRTITGLGLKEAKDLVEGAPKTVKEGVNKDEAEKIKK 115
Query: 158 KLKELNAIVVLE 169
L+E A V +E
Sbjct: 116 VLEEQGASVGIE 127
>sp|P55834|RL7_HELPY 50S ribosomal protein L7/L12 OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=rplL PE=3 SV=1
Length = 125
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 12/131 (9%)
Query: 36 SRTQKLERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETK 95
S+ + LE I L+ LE + +F K G V A P+ A+ + A +
Sbjct: 4 SKEEVLEYIGS----LSVLELSELVKMFEKKFG-------VSATPTVVAGAAVAGGAAAE 52
Query: 96 AAEKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKI 155
+ EKT F+V L A KIK+IK V+ TGLGLKE+KD EK P V+K+GV KEEA+ I
Sbjct: 53 SEEKTEFNVILAD-SGAEKIKVIKVVREITGLGLKEAKDATEKTPHVLKEGVNKEEAETI 111
Query: 156 VEKLKELNAIV 166
+KL+E+ A V
Sbjct: 112 KKKLEEVGAKV 122
>sp|B2UUW1|RL7_HELPS 50S ribosomal protein L7/L12 OS=Helicobacter pylori (strain Shi470)
GN=rplL PE=3 SV=1
Length = 125
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 12/131 (9%)
Query: 36 SRTQKLERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETK 95
S+ + LE I L+ LE + +F K G V A P+ A+ + A +
Sbjct: 4 SKEEVLEYIGS----LSVLELSELVKMFEEKFG-------VSATPTVVAGAAVAGGAAAE 52
Query: 96 AAEKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKI 155
+ EKT F+V L A KIK+IK V+ TGLGLKE+KD EK P V+K+GV KEEA+ I
Sbjct: 53 SEEKTEFNVILAD-SGAEKIKVIKVVREITGLGLKEAKDATEKTPHVLKEGVNKEEAETI 111
Query: 156 VEKLKELNAIV 166
+KL+E+ A V
Sbjct: 112 KKKLEEVGAKV 122
>sp|P56875|RL7_HELPJ 50S ribosomal protein L7/L12 OS=Helicobacter pylori (strain J99)
GN=rplL PE=3 SV=1
Length = 125
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 12/131 (9%)
Query: 36 SRTQKLERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETK 95
S+ + LE I L+ LE + +F K G V A P+ A+ + A +
Sbjct: 4 SKEEVLEYIGS----LSVLELSELVKMFEEKFG-------VSATPTVVAGAAVAGGAAAE 52
Query: 96 AAEKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKI 155
+ EKT F+V L A KIK+IK V+ TGLGLKE+KD EK P V+K+GV KEEA+ I
Sbjct: 53 SEEKTEFNVILAD-SGAEKIKVIKVVREITGLGLKEAKDATEKTPHVLKEGVNKEEAETI 111
Query: 156 VEKLKELNAIV 166
+KL+E+ A V
Sbjct: 112 KKKLEEVGAKV 122
>sp|Q1CS67|RL7_HELPH 50S ribosomal protein L7/L12 OS=Helicobacter pylori (strain HPAG1)
GN=rplL PE=3 SV=1
Length = 125
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 12/131 (9%)
Query: 36 SRTQKLERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETK 95
S+ + LE I L+ LE + +F K G V A P+ A+ + A +
Sbjct: 4 SKEEVLEYIGS----LSVLELSELVKMFEEKFG-------VSATPTVVAGAAVAGGAAAE 52
Query: 96 AAEKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKI 155
+ EKT F+V L A KIK+IK V+ TGLGLKE+KD EK P V+K+GV KEEA+ I
Sbjct: 53 SEEKTEFNVILAD-SGAEKIKVIKVVREITGLGLKEAKDATEKTPHVLKEGVNKEEAETI 111
Query: 156 VEKLKELNAIV 166
+KL+E+ A V
Sbjct: 112 KKKLEEVGAKV 122
>sp|B4S496|RL7_PROA2 50S ribosomal protein L7/L12 OS=Prosthecochloris aestuarii (strain
DSM 271 / SK 413) GN=rplL PE=3 SV=1
Length = 126
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV+L K A KI +IK V++ TGLGLKE+K++V+ AP V+K+ V+KEEA+KI +
Sbjct: 56 EKTEFDVEL-KAAGANKINVIKVVRSITGLGLKEAKEVVDGAPKVVKEAVSKEEAEKIAK 114
Query: 158 KLKELNAIVVL 168
+LK+ A V L
Sbjct: 115 ELKDAGAEVEL 125
>sp|B5Z8J6|RL7_HELPG 50S ribosomal protein L7/L12 OS=Helicobacter pylori (strain G27)
GN=rplL PE=3 SV=1
Length = 125
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 12/131 (9%)
Query: 36 SRTQKLERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETK 95
S+ + LE I L+ LE + +F K G V A P+ A+ + A +
Sbjct: 4 SKEEVLEYIGS----LSVLELAELVKMFEEKFG-------VSATPTVVAGAAVAGGAAAE 52
Query: 96 AAEKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKI 155
+ EKT F+V L A KIK+IK V+ TGLGLKE+KD EK P V+K+GV KEEA+ I
Sbjct: 53 SEEKTEFNVILAD-SGAEKIKVIKVVREITGLGLKEAKDATEKTPHVLKEGVNKEEAETI 111
Query: 156 VEKLKELNAIV 166
+KL+E+ A V
Sbjct: 112 KKKLEEVGAKV 122
>sp|B6JN38|RL7_HELP2 50S ribosomal protein L7/L12 OS=Helicobacter pylori (strain P12)
GN=rplL PE=3 SV=1
Length = 125
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 12/131 (9%)
Query: 36 SRTQKLERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETK 95
S+ + LE I L+ LE + +F K G V A P+ A+ + A +
Sbjct: 4 SKEEVLEYIGS----LSVLELAELVKMFEEKFG-------VSATPTVVAGAAVAGGAAAE 52
Query: 96 AAEKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKI 155
+ EKT F+V L A KIK+IK V+ TGLGLKE+KD EK P V+K+GV KEEA+ I
Sbjct: 53 SEEKTEFNVILAD-SGAEKIKVIKVVREITGLGLKEAKDATEKTPHVLKEGVNKEEAETI 111
Query: 156 VEKLKELNAIV 166
+KL+E+ A V
Sbjct: 112 KKKLEEVGAKV 122
>sp|A2C031|RL7_PROM1 50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain
NATL1A) GN=rplL PE=3 SV=1
Length = 131
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 51/71 (71%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT F+V LE +D ++KIK++KEV+ TGLGL E+K LVE AP IK+G TKE+A+ + +
Sbjct: 60 EKTEFEVVLESFDASSKIKVLKEVRNATGLGLGEAKALVEAAPKTIKEGATKEDAEALKK 119
Query: 158 KLKELNAIVVL 168
++ + V L
Sbjct: 120 AIEAVGGKVTL 130
>sp|A5VR16|RL7_BRUO2 50S ribosomal protein L7/L12 OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=rplL PE=3 SV=1
Length = 124
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L A KI +IKEV+ TGLGLKE+KDLVE AP +K+GV+K+EA+KI
Sbjct: 54 EKTEFDVVLAD-GGANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGVSKDEAEKIKA 112
Query: 158 KLKELNAIVVL 168
+L+ A V L
Sbjct: 113 QLEAAGAKVEL 123
>sp|Q2JM48|RL7_SYNJB 50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=rplL PE=3 SV=1
Length = 136
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 48/68 (70%)
Query: 99 KTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEK 158
+TAFDV LE KI I+K V+ TGLGLK++KDLVE AP +K+GV KEEA+ I +K
Sbjct: 66 QTAFDVILEAVPADKKIAILKVVRELTGLGLKDAKDLVEAAPKPVKEGVAKEEANDIKKK 125
Query: 159 LKELNAIV 166
L+E A V
Sbjct: 126 LEEAGATV 133
>sp|Q17VN5|RL7_HELAH 50S ribosomal protein L7/L12 OS=Helicobacter acinonychis (strain
Sheeba) GN=rplL PE=3 SV=1
Length = 125
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 12/131 (9%)
Query: 36 SRTQKLERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETK 95
S+ + LE I L+ LE + +F K G V A P+ A+ + A +
Sbjct: 4 SKEEVLEYIGS----LSVLELSELVKMFEEKFG-------VSATPTVVAGAAVAGGAVAE 52
Query: 96 AAEKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKI 155
+ EKT F+V L A KIK+IK V+ TGLGLKE+KD EK P V+K+GV KEEA+ I
Sbjct: 53 SEEKTDFNVILAD-SGAEKIKVIKVVREITGLGLKEAKDATEKTPHVLKEGVNKEEAETI 111
Query: 156 VEKLKELNAIV 166
+KL+E+ A V
Sbjct: 112 KKKLEEVGAKV 122
>sp|Q211D7|RL7_RHOPB 50S ribosomal protein L7/L12 OS=Rhodopseudomonas palustris (strain
BisB18) GN=rplL PE=3 SV=1
Length = 123
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 41 LERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETKAAEKT 100
L++I D+L LT LE + A L K G+ + ++ A + +A A EKT
Sbjct: 4 LQKIVDDLSSLTVLEAAELAKLLEEKWGV--------SAAAAVAVAGPAAAAAAPAEEKT 55
Query: 101 AFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V L + KI++IKEV+ TGLGLKE+KDLVE AP +K+GV K+EADKI +L+
Sbjct: 56 EFTVVLAAAGE-KKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVNKDEADKIKAQLE 114
Query: 161 ELNAIVVL 168
+ A V L
Sbjct: 115 KAGAKVEL 122
>sp|Q2IXS1|RL7_RHOP2 50S ribosomal protein L7/L12 OS=Rhodopseudomonas palustris (strain
HaA2) GN=rplL PE=3 SV=1
Length = 123
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 41 LERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETKAAEKT 100
L++I D+L LT LE + A L K G+ + ++ A+ +A EKT
Sbjct: 4 LQKIVDDLSSLTVLEAAELAKLLEEKWGV--------SAAAAVAVAAAPGAAAAAVEEKT 55
Query: 101 AFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V L KI++IKEV+ TGLGLKE+KDLVE AP +K+GV KEEADK+ +L+
Sbjct: 56 EFTVMLAAAGD-KKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVNKEEADKLKAQLE 114
Query: 161 ELNAIVVL 168
+ A V L
Sbjct: 115 KAGAKVEL 122
>sp|A6X0A8|RL7_OCHA4 50S ribosomal protein L7/L12 OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=rplL PE=3 SV=1
Length = 124
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 72/128 (56%), Gaps = 8/128 (6%)
Query: 41 LERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETKAAEKT 100
L +I D+L LT LE + + L K G V A AA+G + A EKT
Sbjct: 4 LAKIVDDLSALTVLEAAELSKLLEEKWG-------VSAAAPVAVAAAGGAAPAAAAEEKT 56
Query: 101 AFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
FDV L A KI +IKEV+ TGLGLKE+KDLVE AP +K+G +K+EA+KI +L+
Sbjct: 57 EFDVVLADG-GANKINVIKEVRAITGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKAQLE 115
Query: 161 ELNAIVVL 168
A V L
Sbjct: 116 AAGAKVEL 123
>sp|P41189|RL7_LIBAF 50S ribosomal protein L7/L12 OS=Liberibacter africanus GN=rplL PE=3
SV=1
Length = 125
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 99 KTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEK 158
KT F+V LE +D KI +IKEV+ T LGLKE+KD VE AP +K GV+K+EA+++ +K
Sbjct: 55 KTEFEVFLEGFDAKKKISVIKEVRAITELGLKEAKDFVESAPKSLKTGVSKDEAEELKKK 114
Query: 159 LKELNAIVVL 168
L+ A ++L
Sbjct: 115 LEAAGATIIL 124
>sp|Q2JTQ2|RL7_SYNJA 50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=rplL PE=3 SV=1
Length = 137
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 99 KTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEK 158
+TAFDV LE KI ++K V+ TGLGLK++KDLVE AP +K+G+ KEEA++I +K
Sbjct: 67 QTAFDVILEAVPADKKIAVLKVVRELTGLGLKDAKDLVEAAPKPVKEGIPKEEANEIKKK 126
Query: 159 LKELNAIV 166
L+E A V
Sbjct: 127 LEEAGATV 134
>sp|B3EL60|RL7_CHLPB 50S ribosomal protein L7/L12 OS=Chlorobium phaeobacteroides (strain
BS1) GN=rplL PE=3 SV=1
Length = 126
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
E+T FDV+L K A KI +IK V++ TGLGLKE+K++V+ AP V+K+ V+KEEA+K+ +
Sbjct: 56 EQTEFDVEL-KAVGANKINVIKAVRSITGLGLKEAKEMVDGAPKVVKEAVSKEEAEKVAK 114
Query: 158 KLKELNAIVVL 168
+LK+ A V L
Sbjct: 115 ELKDAGAEVEL 125
>sp|P44348|RL7_HAEIN 50S ribosomal protein L7/L12 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=rplL PE=3 SV=2
Length = 123
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L K A K+ +IK V+ TGLGLKE+KDLVE APA +K+GV+KEEA+ + +
Sbjct: 53 EKTEFDVVL-KSAGANKVAVIKAVRGATGLGLKEAKDLVESAPANLKEGVSKEEAEALKK 111
Query: 158 KLKELNAIV 166
+L+E A V
Sbjct: 112 ELEEAGAEV 120
>sp|A5UHD2|RL7_HAEIG 50S ribosomal protein L7/L12 OS=Haemophilus influenzae (strain
PittGG) GN=rplL PE=3 SV=1
Length = 123
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L K A K+ +IK V+ TGLGLKE+KDLVE APA +K+GV+KEEA+ + +
Sbjct: 53 EKTEFDVVL-KSAGANKVAVIKAVRGATGLGLKEAKDLVESAPANLKEGVSKEEAEALKK 111
Query: 158 KLKELNAIV 166
+L+E A V
Sbjct: 112 ELEEAGAEV 120
>sp|A5UE95|RL7_HAEIE 50S ribosomal protein L7/L12 OS=Haemophilus influenzae (strain
PittEE) GN=rplL PE=3 SV=1
Length = 123
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L K A K+ +IK V+ TGLGLKE+KDLVE APA +K+GV+KEEA+ + +
Sbjct: 53 EKTEFDVVL-KSAGANKVAVIKAVRGATGLGLKEAKDLVESAPANLKEGVSKEEAEALKK 111
Query: 158 KLKELNAIV 166
+L+E A V
Sbjct: 112 ELEEAGAEV 120
>sp|Q4QMS6|RL7_HAEI8 50S ribosomal protein L7/L12 OS=Haemophilus influenzae (strain
86-028NP) GN=rplL PE=3 SV=1
Length = 123
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L K A K+ +IK V+ TGLGLKE+KDLVE APA +K+GV+KEEA+ + +
Sbjct: 53 EKTEFDVVL-KSAGANKVAVIKAVRGATGLGLKEAKDLVESAPANLKEGVSKEEAEALKK 111
Query: 158 KLKELNAIV 166
+L+E A V
Sbjct: 112 ELEEAGAEV 120
>sp|B8EMS0|RL7_METSB 50S ribosomal protein L7/L12 OS=Methylocella silvestris (strain BL2
/ DSM 15510 / NCIMB 13906) GN=rplL PE=3 SV=1
Length = 126
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 41 LERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETKAAEKT 100
LE+I ++L LT LE + A L +++G A + + +A A E+T
Sbjct: 4 LEKIVEDLSTLTVLEAAELAKLLE-----EKWGVSAAAAVAVAAGPAAGAAAAAPAEEQT 58
Query: 101 AFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKI 155
F V L + KI++IKEV+ TGLGLKE+KDLVE AP +K+GVTKEEA+KI
Sbjct: 59 EFTVVLAAFGD-KKIEVIKEVRAVTGLGLKEAKDLVEAAPKPVKEGVTKEEAEKI 112
>sp|A9BDG4|RL7_PROM4 50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT
9211) GN=rplL PE=3 SV=1
Length = 132
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 49/70 (70%)
Query: 99 KTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEK 158
KT FDV LE +D A KIK++KEV+ TGLGL E+K +VE AP IK+G +KE+A+ + +
Sbjct: 62 KTEFDVILESFDAAAKIKVLKEVRNATGLGLGEAKAMVEAAPKTIKEGASKEDAEALKKA 121
Query: 159 LKELNAIVVL 168
++ + V L
Sbjct: 122 IEAVGGKVTL 131
>sp|Q7U3T9|RL7_SYNPX 50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain WH8102)
GN=rplL PE=3 SV=1
Length = 131
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 99 KTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEK 158
KT FDV LE +D A KIK++K V+ TGLGL ++K LVE AP IK+G++K+EA+ + ++
Sbjct: 61 KTEFDVILESFDAAAKIKVLKAVRNATGLGLGDAKALVEAAPKPIKEGISKDEAEALKKE 120
Query: 159 LKELNAIVVL 168
++E+ V L
Sbjct: 121 IEEVGGKVTL 130
>sp|P0A469|RL7_BRUSU 50S ribosomal protein L7/L12 OS=Brucella suis biovar 1 (strain
1330) GN=rplL PE=3 SV=1
Length = 124
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L A KI +IKEV+ TGLGLKE+KDLVE AP +K+G +K+EA+KI
Sbjct: 54 EKTEFDVVLAD-GGANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKA 112
Query: 158 KLKELNAIVVL 168
+L+ A V L
Sbjct: 113 QLEAAGAKVEL 123
>sp|B0CH42|RL7_BRUSI 50S ribosomal protein L7/L12 OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=rplL PE=3 SV=1
Length = 124
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L A KI +IKEV+ TGLGLKE+KDLVE AP +K+G +K+EA+KI
Sbjct: 54 EKTEFDVVLAD-GGANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKA 112
Query: 158 KLKELNAIVVL 168
+L+ A V L
Sbjct: 113 QLEAAGAKVEL 123
>sp|P0A468|RL7_BRUME 50S ribosomal protein L7/L12 OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=rplL PE=3 SV=1
Length = 124
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L A KI +IKEV+ TGLGLKE+KDLVE AP +K+G +K+EA+KI
Sbjct: 54 EKTEFDVVLAD-GGANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKA 112
Query: 158 KLKELNAIVVL 168
+L+ A V L
Sbjct: 113 QLEAAGAKVEL 123
>sp|C0RJL2|RL7_BRUMB 50S ribosomal protein L7/L12 OS=Brucella melitensis biotype 2
(strain ATCC 23457) GN=rplL PE=3 SV=1
Length = 124
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L A KI +IKEV+ TGLGLKE+KDLVE AP +K+G +K+EA+KI
Sbjct: 54 EKTEFDVVLAD-GGANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKA 112
Query: 158 KLKELNAIVVL 168
+L+ A V L
Sbjct: 113 QLEAAGAKVEL 123
>sp|A9M5R1|RL7_BRUC2 50S ribosomal protein L7/L12 OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=rplL PE=3 SV=1
Length = 124
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L A KI +IKEV+ TGLGLKE+KDLVE AP +K+G +K+EA+KI
Sbjct: 54 EKTEFDVVLAD-GGANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKA 112
Query: 158 KLKELNAIVVL 168
+L+ A V L
Sbjct: 113 QLEAAGAKVEL 123
>sp|P0A470|RL7_BRUAB 50S ribosomal protein L7/L12 OS=Brucella abortus biovar 1 (strain
9-941) GN=rplL PE=3 SV=1
Length = 124
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L A KI +IKEV+ TGLGLKE+KDLVE AP +K+G +K+EA+KI
Sbjct: 54 EKTEFDVVLAD-GGANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKA 112
Query: 158 KLKELNAIVVL 168
+L+ A V L
Sbjct: 113 QLEAAGAKVEL 123
>sp|Q2YM14|RL7_BRUA2 50S ribosomal protein L7/L12 OS=Brucella abortus (strain 2308)
GN=rplL PE=3 SV=1
Length = 124
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L A KI +IKEV+ TGLGLKE+KDLVE AP +K+G +K+EA+KI
Sbjct: 54 EKTEFDVVLAD-GGANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKA 112
Query: 158 KLKELNAIVVL 168
+L+ A V L
Sbjct: 113 QLEAAGAKVEL 123
>sp|B2S688|RL7_BRUA1 50S ribosomal protein L7/L12 OS=Brucella abortus (strain S19)
GN=rplL PE=3 SV=1
Length = 124
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L A KI +IKEV+ TGLGLKE+KDLVE AP +K+G +K+EA+KI
Sbjct: 54 EKTEFDVVLAD-GGANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKA 112
Query: 158 KLKELNAIVVL 168
+L+ A V L
Sbjct: 113 QLEAAGAKVEL 123
>sp|A4YSI0|RL7_BRASO 50S ribosomal protein L7/L12 OS=Bradyrhizobium sp. (strain ORS278)
GN=rplL PE=3 SV=1
Length = 125
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 7/128 (5%)
Query: 41 LERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETKAAEKT 100
L++I D+L LT LE + A L K G V A + A G +A A EKT
Sbjct: 4 LQKIVDDLSSLTVLEAAELAKLLEEKWG------VSAAAAVAVAAPGGGGAAAAPAEEKT 57
Query: 101 AFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V L KI++IKEV+ TGLGLKE+KDLVE AP +K+GV KEEA+KI +L+
Sbjct: 58 EFTVVLASAGD-KKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVNKEEAEKIKGQLE 116
Query: 161 ELNAIVVL 168
+ A V L
Sbjct: 117 KAGAKVEL 124
>sp|A9ISF8|RL7_BART1 50S ribosomal protein L7/L12 OS=Bartonella tribocorum (strain CIP
105476 / IBS 506) GN=rplL PE=3 SV=1
Length = 123
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L + A KI +IKEV+ TGLGLKE+KDLVE AP IK+G +KEEA+KI
Sbjct: 53 EKTEFDVILVEGG-AQKINVIKEVRALTGLGLKEAKDLVEGAPKPIKEGASKEEAEKIKS 111
Query: 158 KLKELNAIVVL 168
+L+ A V L
Sbjct: 112 QLEAAGAKVEL 122
>sp|Q9USJ9|MNP1_SCHPO 54S ribosomal protein L12, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mnp1 PE=3 SV=2
Length = 173
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 50/70 (71%)
Query: 100 TAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKL 159
T +++KLE +D +K K+IKEVK+ GL L ++K VE AP V+K+ + KE+A+ I KL
Sbjct: 104 TTWNLKLESFDAGSKAKVIKEVKSLLGLSLVDAKKFVESAPKVLKENILKEDAEAIKSKL 163
Query: 160 KELNAIVVLE 169
++L+ VVLE
Sbjct: 164 EKLSCKVVLE 173
>sp|Q3J8Q6|RL7_NITOC 50S ribosomal protein L7/L12 OS=Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848) GN=rplL PE=3 SV=1
Length = 126
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L + + K+++IK V++ T LGLKE+KDLVE AP+ +K+G++K+EAD+I +
Sbjct: 56 EKTEFDVVLVSFG-SNKVQVIKAVRSITSLGLKEAKDLVEGAPSPVKEGISKDEADEIKK 114
Query: 158 KLKELNA 164
+L+E A
Sbjct: 115 QLEEAGA 121
>sp|A7HCH8|RL7_ANADF 50S ribosomal protein L7/L12 OS=Anaeromyxobacter sp. (strain
Fw109-5) GN=rplL PE=3 SV=1
Length = 125
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 41 LERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETKAAEKT 100
L I D+L LT +E D K G+ PV+ A + +A EKT
Sbjct: 4 LNTIVDQLSGLTVMEAADLVKKLEEKWGVSAAAPVMVAGGAG------GAAAAAPVEEKT 57
Query: 101 AFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F+V L A KI +IKEV+ TGLGLKE+KDLVE AP +K G+ K EAD++ +KL+
Sbjct: 58 EFNVVLADAG-ANKINVIKEVRAITGLGLKEAKDLVEGAPKEVKVGIPKAEADELKKKLE 116
Query: 161 ELNA 164
A
Sbjct: 117 AAGA 120
>sp|Q46HH2|RL7_PROMT 50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain
NATL2A) GN=rplL PE=3 SV=1
Length = 131
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT F+V LE ++ ++KIK++KEV+ TGLGL E+K LVE AP IK+G TKE+A+ + +
Sbjct: 60 EKTEFEVVLESFEASSKIKVLKEVRNATGLGLGEAKALVEAAPKTIKEGATKEDAEALKK 119
Query: 158 KLKELNAIVVL 168
++ + V L
Sbjct: 120 AIEAVGGKVTL 130
>sp|Q0I6L0|RL7_SYNS3 50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain CC9311)
GN=rplL PE=3 SV=1
Length = 128
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 51/71 (71%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV LE +D A KIK++K V+ TGLGL ++K +VE AP IK+GV+K++A+ + +
Sbjct: 57 EKTEFDVVLESFDAAAKIKVLKAVREATGLGLGDAKAMVEAAPKAIKEGVSKDDAEALKK 116
Query: 158 KLKELNAIVVL 168
++E+ V +
Sbjct: 117 AIEEVGGKVTI 127
>sp|B4U736|RL7_HYDS0 50S ribosomal protein L7/L12 OS=Hydrogenobaculum sp. (strain
Y04AAS1) GN=rplL PE=3 SV=1
Length = 127
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L+ A K+ +IK V+ TGLGLKE+KDLV+ AP IK+GV+KEEA+ I +
Sbjct: 57 EKTEFDVILQDAG-ANKLNVIKVVRELTGLGLKEAKDLVDGAPKPIKQGVSKEEAENIKK 115
Query: 158 KLKELNAIV 166
KL+E A V
Sbjct: 116 KLEEAGAKV 124
>sp|B3QC01|RL7_RHOPT 50S ribosomal protein L7/L12 OS=Rhodopseudomonas palustris (strain
TIE-1) GN=rplL PE=3 SV=1
Length = 125
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Query: 41 LERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETKAAEKT 100
L++I D+L LT LE + A L K G V A + AA G+ A A EKT
Sbjct: 4 LQKIVDDLSSLTVLEAAELAKLLEEKWG------VSAAAAVAVAAAPGAGGAAAPAEEKT 57
Query: 101 AFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V L KI++IKEV+ TGLGLKE+KDLVE AP +K+GV KEEA+K+ +L+
Sbjct: 58 EFTVVLASAGD-KKIEVIKEVRAITGLGLKEAKDLVEGAPKPLKEGVNKEEAEKVKAQLE 116
Query: 161 ELNAIVVL 168
+ A V L
Sbjct: 117 KAGAKVEL 124
>sp|Q6N4R8|RL7_RHOPA 50S ribosomal protein L7/L12 OS=Rhodopseudomonas palustris (strain
ATCC BAA-98 / CGA009) GN=rplL PE=1 SV=3
Length = 125
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Query: 41 LERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETKAAEKT 100
L++I D+L LT LE + A L K G V A + AA G+ A A EKT
Sbjct: 4 LQKIVDDLSSLTVLEAAELAKLLEEKWG------VSAAAAVAVAAAPGAGGAAAPAEEKT 57
Query: 101 AFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
F V L KI++IKEV+ TGLGLKE+KDLVE AP +K+GV KEEA+K+ +L+
Sbjct: 58 EFTVVLASAGD-KKIEVIKEVRAITGLGLKEAKDLVEGAPKPLKEGVNKEEAEKVKAQLE 116
Query: 161 ELNAIVVL 168
+ A V L
Sbjct: 117 KAGAKVEL 124
>sp|Q11HB2|RL7_MESSB 50S ribosomal protein L7/L12 OS=Mesorhizobium sp. (strain BNC1)
GN=rplL PE=3 SV=1
Length = 125
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 98 EKTAFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVE 157
EKT FDV L A KI +IKEV+ TGLGLKE+KDLVE AP +K+GV K+EA+KI
Sbjct: 55 EKTEFDVVLADAG-AQKINVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVAKDEAEKIKA 113
Query: 158 KLKELNAIVVL 168
+L+ A V L
Sbjct: 114 QLEGAGAKVEL 124
>sp|Q2K9M5|RL7_RHIEC 50S ribosomal protein L7/L12 OS=Rhizobium etli (strain CFN 42 /
ATCC 51251) GN=rplL PE=3 SV=1
Length = 127
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 41 LERISDELLDLTKLERYDFATLFGCKLGLDRFGPVVPAFPSSGPAASGSTSAETKAAEKT 100
L +I ++L LT LE + + L K G+ PV A + + + E EKT
Sbjct: 4 LAKIVEDLSSLTVLEAAELSKLLEEKWGVSAAAPVAVAAVGGAAGGAAAPAEE----EKT 59
Query: 101 AFDVKLEKYDQATKIKIIKEVKTFTGLGLKESKDLVEKAPAVIKKGVTKEEADKIVEKLK 160
FDV L A KI +IKEV+ TGLGLKE+KDLVE AP +K+GV+K EA I +KL+
Sbjct: 60 EFDVILTDA-GANKINVIKEVRAITGLGLKEAKDLVEGAPKAVKEGVSKAEAADIKKKLE 118
Query: 161 ELNA 164
+ A
Sbjct: 119 DAGA 122
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,935,886
Number of Sequences: 539616
Number of extensions: 2175030
Number of successful extensions: 9695
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 8557
Number of HSP's gapped (non-prelim): 847
length of query: 169
length of database: 191,569,459
effective HSP length: 109
effective length of query: 60
effective length of database: 132,751,315
effective search space: 7965078900
effective search space used: 7965078900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)