BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030928
(169 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NPF9|TRXY1_ARATH Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana GN=At1g76760
PE=2 SV=1
Length = 172
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 132/169 (78%), Gaps = 2/169 (1%)
Query: 2 AISLTASTIPSLNAKVSASSSSKLSR-LSSLQFPVQLRRLRISNGSRTSSSSKRRLLPV- 59
+ISL++ST+PSLN+K S+ S+ SR +S+++F +RR+R + S SS R P
Sbjct: 3 SISLSSSTVPSLNSKESSGVSAFASRSISAVKFQFPVRRVRTGDLKFPSLSSTTRCTPRR 62
Query: 60 VEAKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTE 119
+EAKKQTF S +DLL SDKPVLVD+YATWCGPCQ+M PILNEV LKDKIQVVKIDTE
Sbjct: 63 IEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTE 122
Query: 120 KYPQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLSVK 168
KYP IA+ Y+IEALPTFILFKDG+P DRFEGA + QLIQRIE+SL VK
Sbjct: 123 KYPSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSLKVK 171
>sp|Q8L7S9|TRXY2_ARATH Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana GN=At1g43560
PE=1 SV=1
Length = 167
Score = 203 bits (516), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 122/171 (71%), Gaps = 6/171 (3%)
Query: 1 MAISLTASTIPSLNAKVSASSSSKLSRLSSLQFPVQLRRLRISNGSRTSSSSKRRLLP-- 58
MAISL + I S++S+S LSS++ P Q+RR GS S SS R P
Sbjct: 1 MAISLATAYISPCFTPESSNSASPSRTLSSVRLPSQIRRF----GSVQSPSSSTRFAPLT 56
Query: 59 VVEAKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDT 118
V AKKQTF+S DDLLQ SDKPVLVDFYATWCGPCQ M PILNEV LKD I VVKIDT
Sbjct: 57 VRAAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDT 116
Query: 119 EKYPQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLSVKQ 169
EKYP +A+ Y+IEALPTFILFKDGK DRFEGA +QL++RIENSL VKQ
Sbjct: 117 EKYPSLANKYQIEALPTFILFKDGKLWDRFEGALPANQLVERIENSLQVKQ 167
>sp|Q5JMR9|TRXY_ORYSJ Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0963400 PE=2 SV=2
Length = 168
Score = 179 bits (454), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 102/127 (80%), Gaps = 1/127 (0%)
Query: 42 ISNGSRTSSSSKRRLLPV-VEAKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPIL 100
++ G R +++ RR + V+AKKQTFSS D+LL+KS+KPVLVDFYATWCGPCQYM PIL
Sbjct: 40 VAAGLRRAAAPSRRGATLRVQAKKQTFSSFDELLEKSEKPVLVDFYATWCGPCQYMVPIL 99
Query: 101 NEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQR 160
EV L DKIQVVKIDTEKY IA+ Y+IEALPTFI+FK+GKP RFEGA +QLIQ+
Sbjct: 100 QEVSEKLGDKIQVVKIDTEKYTSIANRYQIEALPTFIIFKNGKPCHRFEGALPANQLIQQ 159
Query: 161 IENSLSV 167
IE++L V
Sbjct: 160 IESALEV 166
>sp|P52232|THIO1_SYNY3 Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr0233 PE=3 SV=1
Length = 105
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 70/89 (78%)
Query: 62 AKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKY 121
A K+ F++ ++L S KPVLVDFYATWCGPCQ MAPIL +VG+ L+ +IQVVKIDT+KY
Sbjct: 2 AVKKQFANFAEMLAGSPKPVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKY 61
Query: 122 PQIADTYRIEALPTFILFKDGKPSDRFEG 150
P IA Y+I++LPT +LFK G+P R EG
Sbjct: 62 PAIATQYQIQSLPTLVLFKQGQPVHRMEG 90
>sp|Q7XQQ2|TRXM3_ORYSJ Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0430800 PE=2 SV=4
Length = 175
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%)
Query: 62 AKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKY 121
AK T S ++ + SD PVL++F+A+WCGPC+ + I++E+ +I+ K+DT+ Y
Sbjct: 67 AKTITACSWNEYVICSDIPVLIEFWASWCGPCRMVHRIVDEIAQEYAGRIKCYKLDTDDY 126
Query: 122 PQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLS 166
PQ+A +Y IE +PT +LFKDG+ + G K ++ IE S+S
Sbjct: 127 PQVATSYSIERIPTVLLFKDGEKTHSITGTLPKAVYVRAIEKSIS 171
>sp|P23400|TRXM_CHLRE Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii
GN=TRXM PE=1 SV=3
Length = 140
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 68/106 (64%)
Query: 61 EAKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEK 120
EA + +++ +S PVLVDF+A WCGPC+ +AP+++E+ KDK++ VK++T++
Sbjct: 35 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE 94
Query: 121 YPQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLS 166
P +A Y I ++PT ++FK GK + GA K ++Q +E L+
Sbjct: 95 SPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYLN 140
>sp|P0A4L1|THIO1_NOSS1 Thioredoxin-1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=trxA
PE=3 SV=2
Length = 107
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 67/104 (64%)
Query: 62 AKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKY 121
A + T S+ + SD PVLVDF+A WCGPC+ +AP+++E+ + KI+VVK++T++
Sbjct: 4 AAQVTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDEN 63
Query: 122 PQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
PQ+A Y I ++PT ++FK G+ D GA K L Q +E L
Sbjct: 64 PQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
>sp|P0A4L2|THIO1_ANASO Thioredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=trxA PE=1 SV=2
Length = 107
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 67/104 (64%)
Query: 62 AKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKY 121
A + T S+ + SD PVLVDF+A WCGPC+ +AP+++E+ + KI+VVK++T++
Sbjct: 4 AAQVTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDEN 63
Query: 122 PQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
PQ+A Y I ++PT ++FK G+ D GA K L Q +E L
Sbjct: 64 PQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
>sp|Q8LD49|TRXX_ARATH Thioredoxin X, chloroplastic OS=Arabidopsis thaliana GN=ATHX PE=2
SV=2
Length = 182
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 82/136 (60%), Gaps = 11/136 (8%)
Query: 40 LRISNG---SRTSSSSKRRLLPVVEAKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYM 96
L +S+G +R SSSS R + E + FSS + +S +PVLV+F ATWCGPC+ +
Sbjct: 49 LSLSSGARRTRKSSSSVIRCGGIKEIGESEFSST---VLESAQPVLVEFVATWCGPCKLI 105
Query: 97 APILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKDGK--PSDRFEGAFSK 154
P + + DK+ +VKID + P++ +++ LP FILFKDGK P R EGA +K
Sbjct: 106 YPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFKDGKEVPGSRREGAITK 165
Query: 155 DQLIQRIE---NSLSV 167
+L + I+ NS+SV
Sbjct: 166 AKLKEYIDGLLNSISV 181
>sp|O48737|TRXM1_ARATH Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680
PE=1 SV=1
Length = 179
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 16/154 (10%)
Query: 12 SLNAKVSASSSSKLSRLSSLQFPVQLRRLRISNGSRTSSSSKRRLLPVVEAKKQTFSSLD 71
L +VS SS SK SR+S +LRR I T++ +PVV S+ D
Sbjct: 42 GLRTRVSLSSLSKNSRVS------RLRRGVICEAQDTATG-----IPVVND-----STWD 85
Query: 72 DLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIE 131
L+ K+D+PV VDF+A WCGPC+ + PI+NE+ + + K++T++ P Y +
Sbjct: 86 SLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVR 145
Query: 132 ALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
++PT ++F +G+ D GA SKD L I L
Sbjct: 146 SIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179
>sp|P0A616|THIO_MYCTU Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2
Length = 116
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%)
Query: 77 SDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTF 136
S+KPVLVDF+ATWCGPC+ +AP+L E+ + V K+D + P+ A +++ ++PT
Sbjct: 24 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTL 83
Query: 137 ILFKDGKPSDRFEGAFSKDQLIQRIEN 163
ILFKDG+P R GA K L++ + +
Sbjct: 84 ILFKDGQPVKRIVGAKGKAALLRELSD 110
>sp|P0A617|THIO_MYCBO Thioredoxin OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=trxA PE=3 SV=2
Length = 116
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%)
Query: 77 SDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTF 136
S+KPVLVDF+ATWCGPC+ +AP+L E+ + V K+D + P+ A +++ ++PT
Sbjct: 24 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTL 83
Query: 137 ILFKDGKPSDRFEGAFSKDQLIQRIEN 163
ILFKDG+P R GA K L++ + +
Sbjct: 84 ILFKDGQPVKRIVGAKGKAALLRELSD 110
>sp|O30974|THIO_MYCSM Thioredoxin OS=Mycobacterium smegmatis GN=trxA PE=3 SV=1
Length = 112
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
Query: 60 VEAKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKI--D 117
V +FS+ D+L S KPVLVDF+ATWCGPC+ +AP+L E+ A D++ V KI D
Sbjct: 8 VAVTDDSFST--DVLGSS-KPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKIDVD 64
Query: 118 TEKYPQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
+ P A +++ ++PT ILFKDG P R GA K L++ + ++L
Sbjct: 65 VDANPATARDFQVVSIPTMILFKDGAPVKRIVGAKGKAALLRELSDAL 112
>sp|Q7XKD0|TRXX_ORYSJ Thioredoxin X, chloroplastic OS=Oryza sativa subsp. japonica
GN=TRX-X PE=2 SV=1
Length = 180
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 45 GSRTSSSSKRRLLPVVEAKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVG 104
G R +S++ R V Q S + + +SD PVLVDF A WCGPC+ +AP+++
Sbjct: 54 GGRRIASARVRCGAAVRFIGQ--SEFEAEVLQSDLPVLVDFVADWCGPCRLIAPVVDWAA 111
Query: 105 AALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKDGK--PSDRFEGAFSKDQLIQRIE 162
+ ++++VKID + PQ+ + Y++ LP+ ILFKDGK P R EGA +K + + +E
Sbjct: 112 EEYEGRLKIVKIDHDANPQLIEEYKVYGLPSLILFKDGKEVPGSRREGAITKAKFKEYLE 171
Query: 163 NSLS 166
LS
Sbjct: 172 PLLS 175
>sp|Q1RKN1|THIO_RICBR Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3
SV=2
Length = 105
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 67/104 (64%)
Query: 62 AKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKY 121
A T S ++ + KSD PVLVDF+A WC PC+ + PI+ E+ L+ K++V+K++ ++
Sbjct: 2 ASNVTDKSFEEEVLKSDLPVLVDFWAEWCSPCRMLTPIIEEISKDLESKVKVLKMNIDEN 61
Query: 122 PQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
P+I Y I ++PT +LFK+G+ D G K+ LI+ I N++
Sbjct: 62 PEIPSKYGIRSIPTVMLFKNGEQKDTKVGLHQKNSLIEWINNNI 105
>sp|Q9SEU6|TRXM4_ARATH Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360
PE=1 SV=2
Length = 193
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 72/128 (56%)
Query: 38 RRLRISNGSRTSSSSKRRLLPVVEAKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMA 97
RR RI+ G R + ++ VE + S + +SD PVLV+F+A WCGPC+ +
Sbjct: 64 RRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIH 123
Query: 98 PILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQL 157
PI++++ K + KI+T++ P A+ Y I ++PT I+FK G+ D GA ++ L
Sbjct: 124 PIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETL 183
Query: 158 IQRIENSL 165
+ IE L
Sbjct: 184 EKTIERFL 191
>sp|P46843|TRXB_MYCLE Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium
leprae (strain TN) GN=trxB/A PE=3 SV=1
Length = 458
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 62/87 (71%)
Query: 77 SDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTF 136
S+KPVLVDF+ATWCGPC+ +AP+L E+ + ++++ V K+D + P++A +++ ++PT
Sbjct: 366 SNKPVLVDFWATWCGPCKMVAPVLEEIASEQRNQLTVAKLDVDTNPEMAREFQVVSIPTM 425
Query: 137 ILFKDGKPSDRFEGAFSKDQLIQRIEN 163
ILF+ G+P R GA K L++ + +
Sbjct: 426 ILFQGGQPVKRIVGAKGKAALLRDLSD 452
>sp|P48384|TRXM_PEA Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1
Length = 172
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 62/95 (65%)
Query: 68 SSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADT 127
SS D+L+ S+ PVLVDF+A WCGPC+ +API++E+ KI+ K++T++ P A
Sbjct: 75 SSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATK 134
Query: 128 YRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIE 162
Y I ++PT + FK+G+ D GA K L +++E
Sbjct: 135 YGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVE 169
>sp|P12243|THIO1_SYNE7 Thioredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=trxA
PE=3 SV=2
Length = 107
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 60/90 (66%)
Query: 76 KSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPT 135
+S PVLVDF+A WCGPC+ +AP+++E+ D+++VVK++T++ P +A Y I ++PT
Sbjct: 18 ESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDENPSVASQYGIRSIPT 77
Query: 136 FILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
++FKDG+ D GA K L ++ L
Sbjct: 78 LMIFKDGQRVDTVVGAVPKTTLANTLDKHL 107
>sp|P80579|THIO_ALIAC Thioredoxin OS=Alicyclobacillus acidocaldarius GN=trxA PE=1 SV=1
Length = 105
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%)
Query: 76 KSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPT 135
+ DKPVLVDF+A WCGPC+ MAP+L E A DK+ V K++ ++ P+ + I ++PT
Sbjct: 15 QGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPT 74
Query: 136 FILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
ILFK G+P + G K+QL ++ + L
Sbjct: 75 LILFKGGRPVKQLIGYQPKEQLEAQLADVL 104
>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 181
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 62/99 (62%)
Query: 68 SSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADT 127
SS + + +S+ PV+VDF+A WCGPC+ +AP+++E+ KI V K++T++ P IA
Sbjct: 82 SSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQ 141
Query: 128 YRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLS 166
Y I ++PT + FK+G+ + GA K L IE LS
Sbjct: 142 YNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180
>sp|Q4UNK3|THIO_RICFE Thioredoxin OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=trxA PE=3 SV=2
Length = 105
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%)
Query: 62 AKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKY 121
A T SS + +SD PVLVDF+A WCGPC+ + PI++E+ LK K++V+K++ ++
Sbjct: 2 ANNVTDSSFKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELKGKVKVLKMNIDEN 61
Query: 122 PQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
P I Y I ++PT +LFK+G+ D G K+ L+ I S+
Sbjct: 62 PNIPSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINKSI 105
>sp|Q9ZEE0|THIO_RICPR Thioredoxin OS=Rickettsia prowazekii (strain Madrid E) GN=trxA PE=3
SV=2
Length = 105
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 66/100 (66%)
Query: 66 TFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIA 125
T SS + + +SD PV+VDF+A WCGPC+ + PI++E+ L+DK++V+K++ ++ P+
Sbjct: 6 TDSSFKNEVLESDLPVMVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDENPKTP 65
Query: 126 DTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
Y I ++PT +LFK+G+ D G K+ L+ I S+
Sbjct: 66 SEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINKSI 105
>sp|P50338|THIO_GRIPA Thioredoxin OS=Griffithsia pacifica GN=trxA PE=3 SV=2
Length = 109
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 63/98 (64%)
Query: 68 SSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADT 127
+S + + S +PVLVDF+A WCGPC+ +A ++E+ KDK++VVK++T++ P IA
Sbjct: 9 TSFHEEVINSRQPVLVDFWAPWCGPCRMIASTIDEIAHDYKDKLKVVKVNTDQNPTIATE 68
Query: 128 YRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
Y I ++PT ++F +GK D GA K L+ ++ L
Sbjct: 69 YGIRSIPTVMIFINGKKVDTVVGAVPKLTLLNTLQKHL 106
>sp|P10473|THIO_RHORU Thioredoxin OS=Rhodospirillum rubrum GN=trxA PE=1 SV=1
Length = 104
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 64/103 (62%)
Query: 63 KKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYP 122
K+ + +S ++ + K+D P VDF+A WCGPC+ AP L E+ AL DK+ V KI+ ++ P
Sbjct: 2 KQVSDASFEEDVLKADGPNXVDFWAEWCGPCRQXAPALEELATALGDKVTVAKINIDENP 61
Query: 123 QIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
Q Y + +PT ++FKDG+ + GA K +L + +E S+
Sbjct: 62 QTPSKYGVRGIPTLMIFKDGQVAATKIGALPKTKLFEWVEASV 104
>sp|P33791|THIO_STRAU Thioredoxin (Fragment) OS=Streptomyces aureofaciens GN=trxA PE=3
SV=1
Length = 106
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 60 VEAKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTE 119
V+ TF S D+L+ SDKPVLV F WCGPC+ +AP+L+E+ + K++V K++T+
Sbjct: 4 VKVTNATFKS--DVLE-SDKPVLVHFEGPWCGPCKMVAPVLDEIANEYEGKVKVAKVNTD 60
Query: 120 KYPQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
+ PQ+A Y + ++PT ++FK G+ + GA K +L ++ SL
Sbjct: 61 ENPQLASQYGVRSIPTRLMFKGGEVAANMVGAAPKTRLAAFLDASL 106
>sp|Q9ZP21|TRXM_WHEAT Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1
Length = 175
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 61/98 (62%)
Query: 69 SLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTY 128
+ D+++ + PVLV+F+A WCGPC+ +AP+++E+ KI+ K++T+ P IA TY
Sbjct: 77 NWDNMVIACESPVLVEFWAPWCGPCRMIAPVIDELAKDYVGKIKCCKVNTDDCPNIASTY 136
Query: 129 RIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLS 166
I ++PT ++FKDG+ + GA K L I+ +
Sbjct: 137 GIRSIPTVLMFKDGEKKESVIGAVPKTTLCTIIDKYIG 174
>sp|Q49WR2|THIO_STAS1 Thioredoxin OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=trxA PE=3 SV=1
Length = 104
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 64 KQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQ 123
K T S+ DD +Q LVDF+ATWCGPC+ +AP+L E+ K ++K+D ++ P
Sbjct: 5 KVTDSNFDDNIQSGVN--LVDFWATWCGPCKMIAPVLEELAGDYDGKANILKLDVDENPS 62
Query: 124 IADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
A + + ++PT I+FKDG+P D+ G K+ L + IE L
Sbjct: 63 TAAKFEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVIEKHL 104
>sp|Q9XGS0|TRXM_BRANA Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1
Length = 177
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 10/174 (5%)
Query: 2 AISLTASTIPSLNAKVSASSSSKLSRLSSLQFPVQLRRLRIS--NGSRTSSSSK-RRLLP 58
A + T+S SL +++ +SS +S + F V R R+S + S+ S +S+ RR
Sbjct: 3 AFTCTSSPPISLRSEMMIASSKTVSLSTRQMFSVGGLRTRVSLSSVSKNSRASRLRRGGI 62
Query: 59 VVEAKKQTF-------SSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKI 111
+ EA+ S+ + L+ K+D+PV+VDF+A WCGPC+ + PI+NE+ KI
Sbjct: 63 ICEAQDTATGIPMVNDSTWESLVLKADEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKI 122
Query: 112 QVVKIDTEKYPQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
+ K++T+ P Y + ++PT ++F G+ D GA K L I+ L
Sbjct: 123 KFFKLNTDDSPATPGKYGVRSIPTIMIFVKGEKKDTIIGAVPKTTLATSIDKFL 176
>sp|Q41864|TRXM_MAIZE Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1
Length = 167
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 47 RTSSSSKRRLLPVVEAKKQTFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAA 106
R SK + VV A ++ + D L+ + PVLV+F+A WCGPC+ +AP+++E+
Sbjct: 49 RHVCQSKNAVDEVVVADEKNW---DGLVMACETPVLVEFWAPWCGPCRMIAPVIDELAKD 105
Query: 107 LKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLS 166
KI K++T+ P +A TY I ++PT ++FK G+ + GA K L I+ +
Sbjct: 106 YAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVIGAVPKSTLTTLIDKYIG 165
>sp|P52231|THIO_SYNY3 Thioredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=trxA
PE=1 SV=3
Length = 107
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 71 DDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRI 130
+D+L S+ PVLVDF+A WCGPC+ +AP+++E+ + K++VVK++T++ P A Y I
Sbjct: 14 EDVLD-SELPVLVDFWAPWCGPCRMVAPVVDEISQQYEGKVKVVKLNTDENPNTASQYGI 72
Query: 131 EALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
++PT ++FK G+ D GA K L +E L
Sbjct: 73 RSIPTLMIFKGGQRVDMVVGAVPKTTLASTLEKYL 107
>sp|Q9ZP20|TRXM5_ORYSJ Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica
GN=TRXM PE=2 SV=1
Length = 172
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 61/98 (62%)
Query: 69 SLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTY 128
+ D ++ S+ PVLV+F+A WCGPC+ +AP+++E+ KI+ K++T+ P IA Y
Sbjct: 74 NWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNY 133
Query: 129 RIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLS 166
I ++PT ++FK+G+ + GA K L I+ +S
Sbjct: 134 GIRSIPTVLMFKNGEKKESVIGAVPKTTLATIIDKYVS 171
>sp|P0AA30|THIO_SHIFL Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV=2
Length = 109
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 64/101 (63%)
Query: 66 TFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIA 125
T S D + K+D +LVDF+A WCGPC+ +APIL+E+ + K+ V K++ ++ P A
Sbjct: 9 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 68
Query: 126 DTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLS 166
Y I +PT +LFK+G+ + GA SK QL + ++ +L+
Sbjct: 69 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 109
>sp|P0AA28|THIO_SALTY Thioredoxin-1 OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=trxA PE=3 SV=2
Length = 109
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 64/101 (63%)
Query: 66 TFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIA 125
T S D + K+D +LVDF+A WCGPC+ +APIL+E+ + K+ V K++ ++ P A
Sbjct: 9 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 68
Query: 126 DTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLS 166
Y I +PT +LFK+G+ + GA SK QL + ++ +L+
Sbjct: 69 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 109
>sp|P0AA29|THIO_SALTI Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=2
Length = 109
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 64/101 (63%)
Query: 66 TFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIA 125
T S D + K+D +LVDF+A WCGPC+ +APIL+E+ + K+ V K++ ++ P A
Sbjct: 9 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 68
Query: 126 DTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLS 166
Y I +PT +LFK+G+ + GA SK QL + ++ +L+
Sbjct: 69 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 109
>sp|P0AA25|THIO_ECOLI Thioredoxin-1 OS=Escherichia coli (strain K12) GN=trxA PE=1 SV=2
Length = 109
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 64/101 (63%)
Query: 66 TFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIA 125
T S D + K+D +LVDF+A WCGPC+ +APIL+E+ + K+ V K++ ++ P A
Sbjct: 9 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 68
Query: 126 DTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLS 166
Y I +PT +LFK+G+ + GA SK QL + ++ +L+
Sbjct: 69 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 109
>sp|P0AA26|THIO_ECOL6 Thioredoxin-1 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=trxA PE=3 SV=2
Length = 109
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 64/101 (63%)
Query: 66 TFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIA 125
T S D + K+D +LVDF+A WCGPC+ +APIL+E+ + K+ V K++ ++ P A
Sbjct: 9 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 68
Query: 126 DTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLS 166
Y I +PT +LFK+G+ + GA SK QL + ++ +L+
Sbjct: 69 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 109
>sp|P0AA27|THIO_ECO57 Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA PE=1 SV=2
Length = 109
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 64/101 (63%)
Query: 66 TFSSLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIA 125
T S D + K+D +LVDF+A WCGPC+ +APIL+E+ + K+ V K++ ++ P A
Sbjct: 9 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 68
Query: 126 DTYRIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSLS 166
Y I +PT +LFK+G+ + GA SK QL + ++ +L+
Sbjct: 69 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 109
>sp|P0A0K5|THIO_STAAW Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1
Length = 104
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 82 LVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKD 141
LVDF+ATWCGPC+ +AP+L E+ A + K ++K+D ++ P A Y + ++PT I+FKD
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 80
Query: 142 GKPSDRFEGAFSKDQLIQRIENSL 165
G+P D+ G K+ L + ++ L
Sbjct: 81 GQPVDKVVGFQPKENLAEVLDKHL 104
>sp|P0A0K6|THIO_STAAU Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1
Length = 104
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 82 LVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKD 141
LVDF+ATWCGPC+ +AP+L E+ A + K ++K+D ++ P A Y + ++PT I+FKD
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 80
Query: 142 GKPSDRFEGAFSKDQLIQRIENSL 165
G+P D+ G K+ L + ++ L
Sbjct: 81 GQPVDKVVGFQPKENLAEVLDKHL 104
>sp|Q6GA69|THIO_STAAS Thioredoxin OS=Staphylococcus aureus (strain MSSA476) GN=trxA PE=3
SV=1
Length = 104
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 82 LVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKD 141
LVDF+ATWCGPC+ +AP+L E+ A + K ++K+D ++ P A Y + ++PT I+FKD
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 80
Query: 142 GKPSDRFEGAFSKDQLIQRIENSL 165
G+P D+ G K+ L + ++ L
Sbjct: 81 GQPVDKVVGFQPKENLAEVLDKHL 104
>sp|Q6GHU0|THIO_STAAR Thioredoxin OS=Staphylococcus aureus (strain MRSA252) GN=trxA PE=3
SV=1
Length = 104
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 82 LVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKD 141
LVDF+ATWCGPC+ +AP+L E+ A + K ++K+D ++ P A Y + ++PT I+FKD
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 80
Query: 142 GKPSDRFEGAFSKDQLIQRIENSL 165
G+P D+ G K+ L + ++ L
Sbjct: 81 GQPVDKVVGFQPKENLAEVLDKHL 104
>sp|P99122|THIO_STAAN Thioredoxin OS=Staphylococcus aureus (strain N315) GN=trxA PE=1
SV=1
Length = 104
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 82 LVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKD 141
LVDF+ATWCGPC+ +AP+L E+ A + K ++K+D ++ P A Y + ++PT I+FKD
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 80
Query: 142 GKPSDRFEGAFSKDQLIQRIENSL 165
G+P D+ G K+ L + ++ L
Sbjct: 81 GQPVDKVVGFQPKENLAEVLDKHL 104
>sp|P0A0K4|THIO_STAAM Thioredoxin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=trxA PE=1 SV=1
Length = 104
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 82 LVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKD 141
LVDF+ATWCGPC+ +AP+L E+ A + K ++K+D ++ P A Y + ++PT I+FKD
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 80
Query: 142 GKPSDRFEGAFSKDQLIQRIENSL 165
G+P D+ G K+ L + ++ L
Sbjct: 81 GQPVDKVVGFQPKENLAEVLDKHL 104
>sp|Q5HGT9|THIO_STAAC Thioredoxin OS=Staphylococcus aureus (strain COL) GN=trxA PE=3 SV=1
Length = 104
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 82 LVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKD 141
LVDF+ATWCGPC+ +AP+L E+ A + K ++K+D ++ P A Y + ++PT I+FKD
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 80
Query: 142 GKPSDRFEGAFSKDQLIQRIENSL 165
G+P D+ G K+ L + ++ L
Sbjct: 81 GQPVDKVVGFQPKENLAEVLDKHL 104
>sp|Q2YXD0|THIO_STAAB Thioredoxin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=trxA PE=3 SV=1
Length = 104
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 82 LVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKD 141
LVDF+ATWCGPC+ +AP+L E+ A + K ++K+D ++ P A Y + ++PT I+FKD
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 80
Query: 142 GKPSDRFEGAFSKDQLIQRIENSL 165
G+P D+ G K+ L + ++ L
Sbjct: 81 GQPVDKVVGFQPKENLAEVLDKHL 104
>sp|Q2FZD2|THIO_STAA8 Thioredoxin OS=Staphylococcus aureus (strain NCTC 8325) GN=trxA
PE=2 SV=1
Length = 104
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 82 LVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKD 141
LVDF+ATWCGPC+ +AP+L E+ A + K ++K+D ++ P A Y + ++PT I+FKD
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 80
Query: 142 GKPSDRFEGAFSKDQLIQRIENSL 165
G+P D+ G K+ L + ++ L
Sbjct: 81 GQPVDKVVGFQPKENLAEVLDKHL 104
>sp|Q2FHT6|THIO_STAA3 Thioredoxin OS=Staphylococcus aureus (strain USA300) GN=trxA PE=3
SV=1
Length = 104
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 82 LVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPTFILFKD 141
LVDF+ATWCGPC+ +AP+L E+ A + K ++K+D ++ P A Y + ++PT I+FKD
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 80
Query: 142 GKPSDRFEGAFSKDQLIQRIENSL 165
G+P D+ G K+ L + ++ L
Sbjct: 81 GQPVDKVVGFQPKENLAEVLDKHL 104
>sp|P37395|THIO_CYACA Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1
Length = 107
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 63/97 (64%)
Query: 69 SLDDLLQKSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTY 128
S + + S+K VLVDF+A WCGPC+ ++P+++E+ +++++VKI+T++ P I+ Y
Sbjct: 11 SFEKEVVNSEKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENPSISAEY 70
Query: 129 RIEALPTFILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
I ++PT +LFKDGK D GA K L ++ L
Sbjct: 71 GIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKYL 107
>sp|P52233|THIO_THIFE Thioredoxin OS=Thiobacillus ferrooxidans GN=trxA PE=3 SV=1
Length = 108
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%)
Query: 76 KSDKPVLVDFYATWCGPCQYMAPILNEVGAALKDKIQVVKIDTEKYPQIADTYRIEALPT 135
KS KPVLVDF+A WCGPC+ +APIL E+ D+++V K + ++ P Y I +PT
Sbjct: 19 KSSKPVLVDFWAEWCGPCKMIAPILEEIADEYADRLRVAKFNIDENPNTPPQYAIRGIPT 78
Query: 136 FILFKDGKPSDRFEGAFSKDQLIQRIENSL 165
+LFK GK GA SK QL +++ L
Sbjct: 79 LLLFKAGKLEATKVGALSKAQLTAFLDSQL 108
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,025,102
Number of Sequences: 539616
Number of extensions: 1951106
Number of successful extensions: 6831
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 6087
Number of HSP's gapped (non-prelim): 624
length of query: 169
length of database: 191,569,459
effective HSP length: 109
effective length of query: 60
effective length of database: 132,751,315
effective search space: 7965078900
effective search space used: 7965078900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)