Query 030935
Match_columns 169
No_of_seqs 202 out of 1633
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 10:29:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030935.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030935hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bzb_A Uncharacterized protein 99.9 1.5E-21 5.1E-26 154.5 11.4 122 44-167 53-191 (281)
2 4hc4_A Protein arginine N-meth 99.7 1.1E-16 3.8E-21 131.4 10.0 104 62-169 75-182 (376)
3 1nkv_A Hypothetical protein YJ 99.7 8.6E-16 2.9E-20 118.5 11.8 111 56-169 22-133 (256)
4 3lpm_A Putative methyltransfer 99.7 6.5E-16 2.2E-20 120.3 11.1 124 37-169 22-169 (259)
5 3p9n_A Possible methyltransfer 99.7 2.1E-16 7.2E-21 117.3 8.0 117 51-169 22-146 (189)
6 3bus_A REBM, methyltransferase 99.6 4.7E-15 1.6E-19 115.4 13.9 114 53-169 44-159 (273)
7 3f4k_A Putative methyltransfer 99.6 5E-15 1.7E-19 114.2 13.4 114 52-169 27-143 (257)
8 3dlc_A Putative S-adenosyl-L-m 99.6 2.9E-15 9.8E-20 112.3 11.0 113 53-169 27-141 (219)
9 2o57_A Putative sarcosine dime 99.6 7.9E-15 2.7E-19 115.7 13.1 112 55-169 63-180 (297)
10 1xxl_A YCGJ protein; structura 99.6 9.3E-15 3.2E-19 112.2 12.9 112 50-169 5-117 (239)
11 3kkz_A Uncharacterized protein 99.6 7.8E-15 2.7E-19 114.2 12.7 112 53-169 28-143 (267)
12 3dmg_A Probable ribosomal RNA 99.6 1E-14 3.5E-19 120.0 13.9 115 50-169 211-333 (381)
13 3ujc_A Phosphoethanolamine N-m 99.6 1.9E-15 6.7E-20 116.7 8.9 115 50-169 35-152 (266)
14 1vl5_A Unknown conserved prote 99.6 7.4E-15 2.5E-19 113.8 12.2 96 69-169 36-133 (260)
15 3jwg_A HEN1, methyltransferase 99.6 5.7E-15 1.9E-19 111.6 11.3 114 53-169 12-134 (219)
16 3jwh_A HEN1; methyltransferase 99.6 6.9E-15 2.4E-19 111.1 11.3 111 56-169 15-134 (217)
17 2xvm_A Tellurite resistance pr 99.6 7.1E-15 2.4E-19 108.9 11.2 97 68-169 30-129 (199)
18 3ofk_A Nodulation protein S; N 99.6 2.3E-15 7.9E-20 113.4 8.6 113 51-169 32-147 (216)
19 3vc1_A Geranyl diphosphate 2-C 99.6 1.6E-14 5.6E-19 115.1 13.8 106 60-169 106-214 (312)
20 3hem_A Cyclopropane-fatty-acyl 99.6 2.5E-14 8.7E-19 113.3 14.6 107 58-169 60-176 (302)
21 4htf_A S-adenosylmethionine-de 99.6 1.4E-14 4.7E-19 113.8 12.1 97 70-169 68-166 (285)
22 3evz_A Methyltransferase; NYSG 99.6 1.9E-14 6.5E-19 109.5 12.2 98 69-169 54-172 (230)
23 1kpg_A CFA synthase;, cyclopro 99.6 4.3E-14 1.5E-18 111.0 14.5 111 54-169 48-161 (287)
24 1ve3_A Hypothetical protein PH 99.6 1.5E-14 5.1E-19 109.3 11.2 109 55-169 25-135 (227)
25 3m70_A Tellurite resistance pr 99.6 7.7E-15 2.6E-19 115.3 9.6 95 70-169 120-216 (286)
26 3mgg_A Methyltransferase; NYSG 99.6 2.6E-14 8.9E-19 111.5 12.4 110 55-169 22-135 (276)
27 2ift_A Putative methylase HI07 99.6 2.1E-15 7.3E-20 113.4 6.0 96 70-169 53-156 (201)
28 3dh0_A SAM dependent methyltra 99.6 1.3E-14 4.4E-19 109.4 10.1 98 68-169 35-136 (219)
29 1dus_A MJ0882; hypothetical pr 99.6 2.1E-14 7.3E-19 105.5 11.0 105 60-169 42-150 (194)
30 3hm2_A Precorrin-6Y C5,15-meth 99.6 3.8E-14 1.3E-18 103.3 12.1 105 57-169 12-120 (178)
31 3g5l_A Putative S-adenosylmeth 99.6 2.3E-14 8E-19 110.4 11.1 102 62-169 36-138 (253)
32 3iv6_A Putative Zn-dependent a 99.6 1E-14 3.5E-19 114.4 9.1 102 60-169 35-141 (261)
33 4gek_A TRNA (CMO5U34)-methyltr 99.6 3.1E-14 1.1E-18 111.5 11.8 97 69-169 69-171 (261)
34 2fyt_A Protein arginine N-meth 99.6 4.5E-14 1.6E-18 114.4 13.2 108 58-169 52-164 (340)
35 3lcc_A Putative methyl chlorid 99.6 2.1E-14 7.1E-19 109.7 10.6 109 56-169 54-164 (235)
36 3r0q_C Probable protein argini 99.6 3.7E-14 1.3E-18 116.4 12.7 111 55-169 48-162 (376)
37 3e05_A Precorrin-6Y C5,15-meth 99.6 1.8E-13 6.2E-18 102.4 15.5 102 61-169 31-135 (204)
38 4dcm_A Ribosomal RNA large sub 99.6 2E-14 6.7E-19 118.1 10.9 108 59-169 211-327 (375)
39 2fhp_A Methylase, putative; al 99.6 8.3E-15 2.8E-19 107.7 7.8 115 51-169 24-147 (187)
40 2fk8_A Methoxy mycolic acid sy 99.6 8.2E-14 2.8E-18 111.0 14.1 109 56-169 76-187 (318)
41 3gu3_A Methyltransferase; alph 99.6 4.3E-14 1.5E-18 111.3 12.1 98 67-169 19-119 (284)
42 2p8j_A S-adenosylmethionine-de 99.5 1E-14 3.4E-19 109.1 7.7 96 70-169 23-121 (209)
43 3sm3_A SAM-dependent methyltra 99.5 1E-14 3.6E-19 110.5 7.8 98 70-169 30-134 (235)
44 3njr_A Precorrin-6Y methylase; 99.5 2E-13 6.8E-18 102.9 14.3 101 61-169 46-147 (204)
45 1ws6_A Methyltransferase; stru 99.5 3.2E-15 1.1E-19 108.2 4.1 115 51-169 20-140 (171)
46 3mti_A RRNA methylase; SAM-dep 99.5 5.1E-14 1.8E-18 103.7 10.7 109 56-169 9-128 (185)
47 2p7i_A Hypothetical protein; p 99.5 1.5E-14 5.1E-19 110.3 7.9 93 69-169 41-134 (250)
48 2yqz_A Hypothetical protein TT 99.5 7.2E-14 2.5E-18 107.8 11.7 109 57-169 25-134 (263)
49 3q7e_A Protein arginine N-meth 99.5 6.1E-14 2.1E-18 114.0 11.8 108 58-169 54-166 (349)
50 2nxc_A L11 mtase, ribosomal pr 99.5 2.2E-14 7.6E-19 111.6 8.6 124 34-169 88-211 (254)
51 2fpo_A Methylase YHHF; structu 99.5 1.4E-14 4.6E-19 109.0 7.1 112 52-169 35-153 (202)
52 1pjz_A Thiopurine S-methyltran 99.5 1.9E-14 6.4E-19 108.3 7.6 108 57-169 10-133 (203)
53 3thr_A Glycine N-methyltransfe 99.5 2.9E-14 9.9E-19 112.1 9.0 110 58-169 45-168 (293)
54 3l8d_A Methyltransferase; stru 99.5 5.3E-14 1.8E-18 107.4 10.1 105 57-169 42-146 (242)
55 1y8c_A S-adenosylmethionine-de 99.5 2.3E-14 8E-19 109.2 8.1 95 70-169 37-135 (246)
56 3gdh_A Trimethylguanosine synt 99.5 1.4E-14 4.8E-19 111.0 6.8 97 70-169 78-174 (241)
57 3dli_A Methyltransferase; PSI- 99.5 3E-14 1E-18 109.2 8.5 105 56-169 26-133 (240)
58 3e23_A Uncharacterized protein 99.5 5E-14 1.7E-18 105.8 9.4 90 70-169 43-134 (211)
59 3bkw_A MLL3908 protein, S-aden 99.5 3.8E-14 1.3E-18 108.1 8.9 97 67-169 40-137 (243)
60 2kw5_A SLR1183 protein; struct 99.5 1.1E-13 3.7E-18 103.1 11.1 95 70-169 30-124 (202)
61 1g6q_1 HnRNP arginine N-methyl 99.5 1E-13 3.6E-18 111.6 11.8 106 60-169 28-138 (328)
62 3hnr_A Probable methyltransfer 99.5 5E-14 1.7E-18 106.2 8.9 92 70-169 45-138 (220)
63 2p35_A Trans-aconitate 2-methy 99.5 1.2E-13 4E-18 106.5 11.1 99 62-169 25-125 (259)
64 3g5t_A Trans-aconitate 3-methy 99.5 1.1E-13 3.8E-18 109.4 11.2 106 58-169 25-142 (299)
65 3dtn_A Putative methyltransfer 99.5 9E-14 3.1E-18 105.8 10.3 96 68-169 42-141 (234)
66 2esr_A Methyltransferase; stru 99.5 1.7E-14 5.7E-19 105.6 5.9 116 50-169 10-131 (177)
67 4hg2_A Methyltransferase type 99.5 3.1E-14 1E-18 111.4 7.6 100 58-169 29-128 (257)
68 3ege_A Putative methyltransfer 99.5 3.3E-14 1.1E-18 110.6 7.5 102 57-167 21-122 (261)
69 2b3t_A Protein methyltransfera 99.5 2.4E-13 8.1E-18 106.7 12.3 112 52-169 92-231 (276)
70 3h2b_A SAM-dependent methyltra 99.5 1.8E-13 6E-18 102.1 10.9 91 71-169 42-134 (203)
71 3fzg_A 16S rRNA methylase; met 99.5 6.2E-15 2.1E-19 110.4 2.8 110 53-169 34-145 (200)
72 3orh_A Guanidinoacetate N-meth 99.5 9.7E-15 3.3E-19 112.5 3.9 114 49-169 42-163 (236)
73 2gb4_A Thiopurine S-methyltran 99.5 1.1E-13 3.7E-18 107.9 9.9 109 56-169 54-184 (252)
74 3grz_A L11 mtase, ribosomal pr 99.5 1.1E-13 3.7E-18 103.6 9.2 123 34-169 28-152 (205)
75 3lbf_A Protein-L-isoaspartate 99.5 3.1E-13 1.1E-17 101.4 11.5 103 57-169 64-167 (210)
76 3ou2_A SAM-dependent methyltra 99.5 1.6E-13 5.5E-18 102.9 9.9 93 68-169 44-139 (218)
77 3bkx_A SAM-dependent methyltra 99.5 2.5E-13 8.5E-18 105.7 11.2 107 62-169 35-152 (275)
78 4dzr_A Protein-(glutamine-N5) 99.5 7.5E-15 2.6E-19 109.7 2.4 112 53-169 12-157 (215)
79 2yxd_A Probable cobalt-precorr 99.5 3.6E-13 1.2E-17 98.1 11.3 104 53-165 18-122 (183)
80 1l3i_A Precorrin-6Y methyltran 99.5 1.8E-13 6.1E-18 100.3 9.7 110 54-169 17-127 (192)
81 1wzn_A SAM-dependent methyltra 99.5 2.2E-13 7.5E-18 104.8 10.4 96 69-169 40-138 (252)
82 2ozv_A Hypothetical protein AT 99.5 2.7E-13 9.1E-18 105.8 10.9 111 53-169 23-163 (260)
83 3i9f_A Putative type 11 methyl 99.5 4.2E-14 1.4E-18 102.7 5.6 90 69-169 16-105 (170)
84 3ccf_A Cyclopropane-fatty-acyl 99.5 8.4E-14 2.9E-18 109.1 7.8 93 68-169 55-147 (279)
85 2y1w_A Histone-arginine methyl 99.5 5.2E-13 1.8E-17 108.4 12.6 108 58-169 38-148 (348)
86 2igt_A SAM dependent methyltra 99.5 3.6E-13 1.2E-17 108.9 11.6 97 70-169 153-265 (332)
87 1yzh_A TRNA (guanine-N(7)-)-me 99.5 9.4E-13 3.2E-17 99.3 13.1 98 70-169 41-149 (214)
88 2ex4_A Adrenal gland protein A 99.5 1.6E-13 5.4E-18 105.2 8.7 95 70-169 79-178 (241)
89 1xtp_A LMAJ004091AAA; SGPP, st 99.5 2.2E-13 7.6E-18 104.6 9.5 101 63-169 86-190 (254)
90 2pjd_A Ribosomal RNA small sub 99.5 5.9E-14 2E-18 113.6 6.4 105 59-169 185-296 (343)
91 3pfg_A N-methyltransferase; N, 99.5 1.9E-13 6.4E-18 106.0 8.9 102 57-169 39-144 (263)
92 4fsd_A Arsenic methyltransfera 99.5 2.4E-13 8.2E-18 111.6 10.0 100 68-169 81-196 (383)
93 3e8s_A Putative SAM dependent 99.5 1.3E-13 4.4E-18 103.8 7.6 92 70-169 52-145 (227)
94 1zx0_A Guanidinoacetate N-meth 99.5 3.5E-14 1.2E-18 108.8 4.6 98 70-169 60-163 (236)
95 2h00_A Methyltransferase 10 do 99.5 2.8E-13 9.6E-18 104.7 9.7 96 55-152 48-153 (254)
96 2a14_A Indolethylamine N-methy 99.5 1.6E-14 5.6E-19 112.7 2.6 101 67-169 52-190 (263)
97 3g07_A 7SK snRNA methylphospha 99.5 6.6E-14 2.3E-18 110.9 6.0 99 68-169 44-213 (292)
98 3g89_A Ribosomal RNA small sub 99.5 2.5E-13 8.6E-18 105.5 9.1 95 69-169 79-177 (249)
99 3mb5_A SAM-dependent methyltra 99.4 8.8E-13 3E-17 101.7 12.0 102 60-169 83-187 (255)
100 1jsx_A Glucose-inhibited divis 99.4 2.8E-13 9.6E-18 101.3 8.7 91 70-169 65-158 (207)
101 2frn_A Hypothetical protein PH 99.4 3.4E-13 1.2E-17 106.3 9.4 93 70-169 125-218 (278)
102 1ri5_A MRNA capping enzyme; me 99.4 2.7E-13 9.2E-18 106.3 8.6 98 69-169 63-167 (298)
103 3ggd_A SAM-dependent methyltra 99.4 3E-13 1E-17 103.7 8.6 113 51-169 39-156 (245)
104 4azs_A Methyltransferase WBDD; 99.4 4.9E-14 1.7E-18 121.3 4.4 85 70-156 66-151 (569)
105 3cc8_A Putative methyltransfer 99.4 2.9E-13 9.9E-18 102.0 8.2 93 69-169 31-123 (230)
106 3ntv_A MW1564 protein; rossman 99.4 4.8E-13 1.6E-17 102.5 9.3 95 69-169 70-169 (232)
107 3d2l_A SAM-dependent methyltra 99.4 5.5E-13 1.9E-17 101.7 9.6 104 58-169 23-130 (243)
108 1nv8_A HEMK protein; class I a 99.4 1.2E-12 4E-17 103.6 11.8 114 52-169 105-242 (284)
109 3fpf_A Mtnas, putative unchara 99.4 2.8E-12 9.7E-17 102.0 14.0 96 66-169 118-215 (298)
110 3dr5_A Putative O-methyltransf 99.4 4.7E-13 1.6E-17 102.3 9.0 112 52-169 38-156 (221)
111 3u81_A Catechol O-methyltransf 99.4 2.4E-13 8.1E-18 103.2 6.7 96 70-169 58-163 (221)
112 2yvl_A TRMI protein, hypotheti 99.4 4.7E-12 1.6E-16 97.0 14.0 101 61-169 82-183 (248)
113 1xdz_A Methyltransferase GIDB; 99.4 3.3E-13 1.1E-17 103.8 7.2 91 70-169 70-167 (240)
114 2gs9_A Hypothetical protein TT 99.4 1.5E-12 5.2E-17 97.5 10.6 89 70-169 36-125 (211)
115 1o9g_A RRNA methyltransferase; 99.4 3.6E-13 1.2E-17 104.0 7.3 107 58-169 39-207 (250)
116 3b3j_A Histone-arginine methyl 99.4 3.9E-13 1.3E-17 113.6 8.1 111 55-169 143-256 (480)
117 2vdw_A Vaccinia virus capping 99.4 4.8E-13 1.6E-17 106.8 8.1 117 51-169 28-162 (302)
118 2i62_A Nicotinamide N-methyltr 99.4 5.2E-14 1.8E-18 108.7 2.4 100 67-169 53-191 (265)
119 2avn_A Ubiquinone/menaquinone 99.4 6E-13 2.1E-17 103.2 8.2 101 58-169 44-145 (260)
120 4dmg_A Putative uncharacterize 99.4 1.2E-12 4.1E-17 108.1 10.4 95 70-169 214-319 (393)
121 3duw_A OMT, O-methyltransferas 99.4 5.4E-13 1.8E-17 101.0 7.7 94 70-169 58-160 (223)
122 3g2m_A PCZA361.24; SAM-depende 99.4 6.8E-13 2.3E-17 104.9 8.5 95 70-169 82-183 (299)
123 2yxe_A Protein-L-isoaspartate 99.4 3.1E-12 1.1E-16 96.2 11.7 108 51-169 59-170 (215)
124 1vbf_A 231AA long hypothetical 99.4 1.8E-12 6.3E-17 98.4 10.4 105 52-169 53-158 (231)
125 3m33_A Uncharacterized protein 99.4 7.9E-13 2.7E-17 100.6 8.1 87 70-169 48-135 (226)
126 3ocj_A Putative exported prote 99.4 7E-13 2.4E-17 105.3 7.8 98 69-169 117-220 (305)
127 2aot_A HMT, histamine N-methyl 99.4 1E-12 3.4E-17 103.8 8.6 97 70-169 52-165 (292)
128 1yb2_A Hypothetical protein TA 99.4 3.1E-12 1.1E-16 100.3 11.3 99 61-169 101-204 (275)
129 3htx_A HEN1; HEN1, small RNA m 99.4 3.9E-12 1.3E-16 112.6 12.6 114 52-169 703-828 (950)
130 2fca_A TRNA (guanine-N(7)-)-me 99.4 2.6E-12 8.8E-17 97.3 9.9 95 70-169 38-146 (213)
131 3eey_A Putative rRNA methylase 99.4 1.8E-12 6E-17 96.3 8.8 98 69-169 21-132 (197)
132 2pxx_A Uncharacterized protein 99.4 8.4E-13 2.9E-17 98.6 7.0 106 57-169 31-152 (215)
133 3kr9_A SAM-dependent methyltra 99.4 1.4E-12 4.9E-17 100.1 8.4 95 70-169 15-112 (225)
134 3k6r_A Putative transferase PH 99.4 1.8E-12 6.1E-17 102.5 9.2 93 70-169 125-218 (278)
135 1o54_A SAM-dependent O-methylt 99.4 6.1E-12 2.1E-16 98.6 12.1 99 63-169 105-206 (277)
136 3bxo_A N,N-dimethyltransferase 99.4 1.8E-12 6.1E-17 98.6 8.8 102 57-169 29-134 (239)
137 1wy7_A Hypothetical protein PH 99.4 6.1E-12 2.1E-16 94.0 11.6 92 68-166 47-141 (207)
138 3tfw_A Putative O-methyltransf 99.4 1.6E-12 5.4E-17 100.7 8.4 94 70-169 63-163 (248)
139 1sui_A Caffeoyl-COA O-methyltr 99.4 2.8E-12 9.6E-17 99.4 9.4 94 70-169 79-183 (247)
140 3tr6_A O-methyltransferase; ce 99.4 9.8E-13 3.3E-17 99.6 6.4 94 70-169 64-167 (225)
141 1dl5_A Protein-L-isoaspartate 99.4 5.7E-12 1.9E-16 100.9 11.1 103 57-169 62-168 (317)
142 3lec_A NADB-rossmann superfami 99.3 2.7E-12 9.1E-17 98.8 8.6 94 70-168 21-117 (230)
143 2gpy_A O-methyltransferase; st 99.3 3.7E-12 1.3E-16 97.1 9.4 94 70-169 54-153 (233)
144 3q87_B N6 adenine specific DNA 99.3 3.9E-12 1.3E-16 93.0 9.1 101 52-169 7-116 (170)
145 2pwy_A TRNA (adenine-N(1)-)-me 99.3 8E-12 2.7E-16 96.2 11.1 99 61-169 87-191 (258)
146 3tma_A Methyltransferase; thum 99.3 8.8E-12 3E-16 101.1 11.9 112 53-169 186-310 (354)
147 2r3s_A Uncharacterized protein 99.3 5.3E-12 1.8E-16 101.0 10.4 97 69-169 164-264 (335)
148 3gnl_A Uncharacterized protein 99.3 2.7E-12 9.3E-17 99.6 8.2 94 70-168 21-117 (244)
149 1u2z_A Histone-lysine N-methyl 99.3 7.4E-12 2.5E-16 104.5 11.2 105 61-169 233-352 (433)
150 2hnk_A SAM-dependent O-methylt 99.3 1.8E-12 6.2E-17 99.4 7.0 95 69-169 59-174 (239)
151 3dxy_A TRNA (guanine-N(7)-)-me 99.3 5.1E-12 1.7E-16 96.3 9.4 96 70-169 34-143 (218)
152 1fbn_A MJ fibrillarin homologu 99.3 7.3E-12 2.5E-16 95.6 10.2 96 66-169 70-171 (230)
153 1nt2_A Fibrillarin-like PRE-rR 99.3 1.3E-11 4.3E-16 93.5 11.3 114 48-169 32-154 (210)
154 4e2x_A TCAB9; kijanose, tetron 99.3 4.3E-13 1.5E-17 110.8 3.4 108 56-169 93-201 (416)
155 3cgg_A SAM-dependent methyltra 99.3 3.7E-12 1.3E-16 93.4 8.1 92 70-169 46-140 (195)
156 3bgv_A MRNA CAP guanine-N7 met 99.3 2.7E-12 9.1E-17 102.2 7.7 98 70-169 34-148 (313)
157 3c0k_A UPF0064 protein YCCW; P 99.3 3.6E-12 1.2E-16 105.1 8.7 97 70-169 220-332 (396)
158 3gwz_A MMCR; methyltransferase 99.3 1.9E-11 6.4E-16 99.7 12.8 98 67-169 199-300 (369)
159 1jg1_A PIMT;, protein-L-isoasp 99.3 7.9E-12 2.7E-16 95.6 9.9 103 57-169 78-182 (235)
160 3a27_A TYW2, uncharacterized p 99.3 6.4E-12 2.2E-16 98.7 9.4 94 68-169 117-212 (272)
161 3c3p_A Methyltransferase; NP_9 99.3 8.1E-12 2.8E-16 93.8 9.6 93 70-169 56-153 (210)
162 2b78_A Hypothetical protein SM 99.3 3.2E-12 1.1E-16 105.2 7.8 98 69-169 211-324 (385)
163 4df3_A Fibrillarin-like rRNA/T 99.3 1.1E-11 3.7E-16 95.6 10.0 119 46-169 49-175 (233)
164 2g72_A Phenylethanolamine N-me 99.3 1.2E-12 4.2E-17 103.0 4.7 99 69-169 70-208 (289)
165 1x19_A CRTF-related protein; m 99.3 2.6E-11 9E-16 98.3 12.7 98 67-169 187-288 (359)
166 1qzz_A RDMB, aclacinomycin-10- 99.3 1.4E-11 4.8E-16 100.1 10.5 96 69-169 181-280 (374)
167 3c3y_A Pfomt, O-methyltransfer 99.3 6.1E-12 2.1E-16 96.8 7.7 94 70-169 70-174 (237)
168 1g8a_A Fibrillarin-like PRE-rR 99.3 1.3E-11 4.5E-16 93.6 9.3 116 49-169 48-171 (227)
169 2avd_A Catechol-O-methyltransf 99.3 5.4E-12 1.8E-16 95.7 7.0 95 69-169 68-172 (229)
170 1uwv_A 23S rRNA (uracil-5-)-me 99.3 3.2E-11 1.1E-15 100.6 12.1 106 54-164 270-378 (433)
171 2jjq_A Uncharacterized RNA met 99.3 7.9E-11 2.7E-15 98.1 14.4 105 53-169 276-380 (425)
172 3i53_A O-methyltransferase; CO 99.3 2.3E-11 8E-16 97.5 10.8 95 70-169 169-267 (332)
173 3mcz_A O-methyltransferase; ad 99.3 2.2E-11 7.6E-16 98.2 10.6 98 68-169 176-280 (352)
174 1tw3_A COMT, carminomycin 4-O- 99.3 2.6E-11 8.7E-16 98.2 11.0 96 69-169 182-281 (360)
175 1i9g_A Hypothetical protein RV 99.3 3.4E-11 1.2E-15 93.9 11.3 102 60-169 89-196 (280)
176 2qm3_A Predicted methyltransfe 99.3 4.1E-11 1.4E-15 98.0 12.2 96 68-169 170-270 (373)
177 2b25_A Hypothetical protein; s 99.3 1.4E-11 4.7E-16 99.2 9.1 101 61-169 96-212 (336)
178 2ipx_A RRNA 2'-O-methyltransfe 99.3 2.4E-11 8.2E-16 92.7 10.0 95 67-169 74-175 (233)
179 3r3h_A O-methyltransferase, SA 99.3 1E-12 3.6E-17 101.6 2.3 95 69-169 59-163 (242)
180 3uwp_A Histone-lysine N-methyl 99.3 3E-11 1E-15 100.1 11.0 112 55-169 158-281 (438)
181 2ip2_A Probable phenazine-spec 99.3 2.7E-11 9.2E-16 97.1 10.3 93 72-169 169-265 (334)
182 1ne2_A Hypothetical protein TA 99.3 4.1E-11 1.4E-15 89.2 10.6 88 68-166 49-139 (200)
183 1wxx_A TT1595, hypothetical pr 99.3 1.6E-11 5.3E-16 100.8 9.0 96 70-169 209-318 (382)
184 3cbg_A O-methyltransferase; cy 99.3 6.7E-12 2.3E-16 96.1 6.2 94 70-169 72-175 (232)
185 3dp7_A SAM-dependent methyltra 99.3 4.8E-11 1.7E-15 97.1 11.5 96 70-169 179-280 (363)
186 3v97_A Ribosomal RNA large sub 99.2 1.8E-11 6.3E-16 107.7 9.0 110 54-169 526-650 (703)
187 3hp7_A Hemolysin, putative; st 99.2 4.8E-11 1.7E-15 94.8 10.6 109 50-169 65-178 (291)
188 3tm4_A TRNA (guanine N2-)-meth 99.2 4.3E-11 1.5E-15 98.0 10.5 107 55-166 203-321 (373)
189 2pbf_A Protein-L-isoaspartate 99.2 6.2E-11 2.1E-15 89.8 10.1 91 68-169 78-186 (227)
190 2as0_A Hypothetical protein PH 99.2 1.5E-11 5.2E-16 101.2 7.1 97 70-169 217-328 (396)
191 1vlm_A SAM-dependent methyltra 99.2 3E-11 1E-15 91.2 7.8 85 71-169 48-132 (219)
192 1i1n_A Protein-L-isoaspartate 99.2 4.9E-11 1.7E-15 90.3 9.0 91 68-169 75-175 (226)
193 1zq9_A Probable dimethyladenos 99.2 9.9E-11 3.4E-15 92.5 11.0 89 58-150 16-104 (285)
194 2qe6_A Uncharacterized protein 99.2 1.2E-10 4.2E-15 91.5 10.9 96 71-169 78-189 (274)
195 3adn_A Spermidine synthase; am 99.2 4.5E-11 1.5E-15 95.1 8.4 95 70-169 83-191 (294)
196 2vdv_E TRNA (guanine-N(7)-)-me 99.2 1E-10 3.6E-15 90.0 10.0 98 70-169 49-166 (246)
197 2yx1_A Hypothetical protein MJ 99.2 5E-11 1.7E-15 96.3 8.5 90 70-169 195-284 (336)
198 3opn_A Putative hemolysin; str 99.2 3.7E-11 1.3E-15 92.4 7.1 108 51-169 18-130 (232)
199 1ej0_A FTSJ; methyltransferase 99.2 5.4E-11 1.9E-15 85.6 7.2 101 54-169 6-129 (180)
200 1af7_A Chemotaxis receptor met 99.2 5.7E-11 2E-15 93.6 7.9 98 70-169 105-245 (274)
201 1r18_A Protein-L-isoaspartate( 99.2 1.2E-10 4.1E-15 88.4 9.3 91 68-169 82-187 (227)
202 3ldu_A Putative methylase; str 99.2 1.1E-10 3.8E-15 96.0 9.7 111 55-168 180-334 (385)
203 1ixk_A Methyltransferase; open 99.2 1.6E-10 5.4E-15 92.6 10.0 108 54-169 106-239 (315)
204 3frh_A 16S rRNA methylase; met 99.2 1.7E-10 5.8E-15 89.2 9.7 93 70-169 105-199 (253)
205 1xj5_A Spermidine synthase 1; 99.1 4.5E-11 1.5E-15 96.7 6.3 98 70-169 120-228 (334)
206 2bm8_A Cephalosporin hydroxyla 99.1 7E-11 2.4E-15 90.9 6.9 88 70-169 81-180 (236)
207 3ldg_A Putative uncharacterize 99.1 2.7E-10 9.1E-15 93.8 10.3 112 54-168 178-333 (384)
208 3id6_C Fibrillarin-like rRNA/T 99.1 5.8E-10 2E-14 85.9 11.3 113 49-169 51-174 (232)
209 3k0b_A Predicted N6-adenine-sp 99.1 2.8E-10 9.6E-15 93.9 10.0 111 55-168 186-340 (393)
210 3ajd_A Putative methyltransfer 99.1 1.3E-10 4.5E-15 91.1 7.5 107 54-169 71-204 (274)
211 2r6z_A UPF0341 protein in RSP 99.1 1.1E-11 3.9E-16 96.8 1.3 79 70-152 83-173 (258)
212 1iy9_A Spermidine synthase; ro 99.1 1.1E-10 3.8E-15 91.8 6.9 96 70-169 75-182 (275)
213 3lcv_B Sisomicin-gentamicin re 99.1 4.4E-11 1.5E-15 93.5 4.3 93 71-169 133-229 (281)
214 2dul_A N(2),N(2)-dimethylguano 99.1 1.1E-10 3.7E-15 95.9 6.9 92 70-169 47-157 (378)
215 3bt7_A TRNA (uracil-5-)-methyl 99.1 4.9E-10 1.7E-14 91.5 10.7 63 55-120 199-261 (369)
216 3bwc_A Spermidine synthase; SA 99.1 9.8E-11 3.4E-15 93.4 6.5 95 70-169 95-203 (304)
217 3ckk_A TRNA (guanine-N(7)-)-me 99.1 2.2E-10 7.4E-15 88.2 8.1 95 70-169 46-161 (235)
218 2f8l_A Hypothetical protein LM 99.1 3.9E-10 1.3E-14 91.1 9.6 95 70-169 130-249 (344)
219 3gru_A Dimethyladenosine trans 99.1 4.6E-10 1.6E-14 89.3 9.8 87 58-150 38-125 (295)
220 1p91_A Ribosomal RNA large sub 99.1 2.4E-10 8.3E-15 88.6 8.0 99 55-169 71-171 (269)
221 2h1r_A Dimethyladenosine trans 99.1 3.8E-10 1.3E-14 89.8 9.0 87 59-152 31-118 (299)
222 3lst_A CALO1 methyltransferase 99.1 1.2E-10 4E-15 94.2 6.1 94 68-169 182-279 (348)
223 3p2e_A 16S rRNA methylase; met 99.1 3.3E-11 1.1E-15 92.2 2.2 95 70-169 24-132 (225)
224 3gjy_A Spermidine synthase; AP 99.1 1.7E-10 5.9E-15 92.6 6.5 92 72-169 91-193 (317)
225 1sqg_A SUN protein, FMU protei 99.1 4.3E-10 1.5E-14 93.5 8.7 111 53-169 233-367 (429)
226 3ll7_A Putative methyltransfer 99.1 1.2E-10 4.2E-15 96.4 5.1 88 53-146 78-170 (410)
227 2yxl_A PH0851 protein, 450AA l 99.0 1.1E-09 3.6E-14 91.8 10.6 108 53-169 246-382 (450)
228 3axs_A Probable N(2),N(2)-dime 99.0 2E-10 6.7E-15 94.8 6.0 93 70-169 52-151 (392)
229 2zfu_A Nucleomethylin, cerebra 99.0 4.6E-10 1.6E-14 84.1 7.6 79 69-169 66-144 (215)
230 2o07_A Spermidine synthase; st 99.0 1.7E-10 5.8E-15 92.1 5.3 96 70-169 95-202 (304)
231 3mq2_A 16S rRNA methyltransfer 99.0 3.2E-10 1.1E-14 85.3 6.4 95 69-169 26-133 (218)
232 2i7c_A Spermidine synthase; tr 99.0 1.3E-10 4.5E-15 91.7 4.5 95 70-169 78-185 (283)
233 1inl_A Spermidine synthase; be 99.0 2.2E-10 7.4E-15 91.1 5.5 96 70-169 90-198 (296)
234 2pt6_A Spermidine synthase; tr 99.0 1.5E-10 5.2E-15 93.0 4.6 97 70-169 116-223 (321)
235 1mjf_A Spermidine synthase; sp 99.0 2.4E-10 8E-15 90.1 5.4 96 70-169 75-186 (281)
236 2plw_A Ribosomal RNA methyltra 99.0 1.1E-09 3.9E-14 81.1 8.4 104 54-169 6-147 (201)
237 2okc_A Type I restriction enzy 99.0 1.1E-09 3.7E-14 91.5 9.1 108 57-169 158-300 (445)
238 1uir_A Polyamine aminopropyltr 99.0 3E-10 1E-14 90.9 5.4 96 70-169 77-188 (314)
239 3tqs_A Ribosomal RNA small sub 99.0 6.5E-10 2.2E-14 86.7 6.8 57 58-116 17-73 (255)
240 3dou_A Ribosomal RNA large sub 99.0 2.2E-09 7.5E-14 80.0 9.2 101 54-169 9-132 (191)
241 2b2c_A Spermidine synthase; be 99.0 2.8E-10 9.7E-15 91.3 4.4 96 70-169 108-215 (314)
242 1qam_A ERMC' methyltransferase 99.0 2.8E-09 9.4E-14 82.4 9.3 59 56-116 16-74 (244)
243 2nyu_A Putative ribosomal RNA 99.0 1.6E-09 5.4E-14 79.9 7.5 101 55-169 7-138 (196)
244 2oxt_A Nucleoside-2'-O-methylt 99.0 1.8E-10 6.3E-15 90.3 2.6 113 49-169 54-176 (265)
245 2cmg_A Spermidine synthase; tr 99.0 2.5E-10 8.6E-15 89.3 3.2 90 70-169 72-164 (262)
246 3m6w_A RRNA methylase; rRNA me 99.0 1.4E-09 4.8E-14 91.5 7.7 107 54-169 89-222 (464)
247 2wa2_A Non-structural protein 98.9 2.4E-10 8.4E-15 90.1 2.7 114 48-169 61-184 (276)
248 2oyr_A UPF0341 protein YHIQ; a 98.9 1.1E-09 3.7E-14 85.6 5.9 80 70-153 86-177 (258)
249 3fut_A Dimethyladenosine trans 98.9 2.5E-09 8.7E-14 84.1 7.7 84 60-152 37-122 (271)
250 1fp2_A Isoflavone O-methyltran 98.9 1.5E-09 5.3E-14 87.6 6.5 86 70-168 188-277 (352)
251 2frx_A Hypothetical protein YE 98.9 8.9E-09 3E-13 86.9 11.1 110 54-169 103-239 (479)
252 4a6d_A Hydroxyindole O-methylt 98.9 1.5E-08 5.1E-13 82.2 11.8 96 68-169 177-276 (353)
253 1fp1_D Isoliquiritigenin 2'-O- 98.9 1.3E-09 4.3E-14 88.8 5.4 88 69-169 208-299 (372)
254 3m4x_A NOL1/NOP2/SUN family pr 98.9 4.6E-09 1.6E-13 88.1 9.0 109 53-169 92-227 (456)
255 2ih2_A Modification methylase 98.9 2.9E-09 9.7E-14 87.6 7.1 84 56-152 25-111 (421)
256 1m6y_A S-adenosyl-methyltransf 98.9 1.5E-09 5.2E-14 86.6 4.5 77 67-145 23-104 (301)
257 3reo_A (ISO)eugenol O-methyltr 98.8 5.9E-09 2E-13 85.0 7.4 88 69-169 202-293 (368)
258 3v97_A Ribosomal RNA large sub 98.8 1.8E-08 6.2E-13 88.7 10.5 112 53-167 173-335 (703)
259 1yub_A Ermam, rRNA methyltrans 98.8 3.2E-10 1.1E-14 87.4 -1.5 87 59-153 18-106 (245)
260 3ftd_A Dimethyladenosine trans 98.8 1.5E-08 5.2E-13 78.6 7.9 87 58-152 19-107 (249)
261 3p9c_A Caffeic acid O-methyltr 98.8 1.6E-08 5.4E-13 82.4 7.9 88 69-169 200-291 (364)
262 2p41_A Type II methyltransfera 98.8 1.5E-08 5.3E-13 80.8 7.5 109 51-169 64-184 (305)
263 1zg3_A Isoflavanone 4'-O-methy 98.7 1.2E-08 4E-13 82.7 6.2 86 70-168 193-282 (358)
264 3uzu_A Ribosomal RNA small sub 98.7 1.4E-08 4.8E-13 80.1 6.5 54 59-114 31-88 (279)
265 2ld4_A Anamorsin; methyltransf 98.7 9.7E-09 3.3E-13 74.7 3.9 83 68-169 10-94 (176)
266 4gqb_A Protein arginine N-meth 98.7 1.1E-07 3.7E-12 82.7 10.1 99 65-169 352-460 (637)
267 3giw_A Protein of unknown func 98.7 6.8E-08 2.3E-12 76.0 8.0 93 72-169 80-193 (277)
268 2qfm_A Spermine synthase; sper 98.7 5.5E-09 1.9E-13 85.1 1.6 96 70-169 188-307 (364)
269 2b9e_A NOL1/NOP2/SUN domain fa 98.7 1.5E-07 5E-12 75.2 9.9 86 54-145 90-180 (309)
270 3sso_A Methyltransferase; macr 98.6 1.6E-08 5.4E-13 83.5 4.3 86 70-169 216-317 (419)
271 1qyr_A KSGA, high level kasuga 98.6 1.6E-08 5.5E-13 78.6 3.2 55 58-116 9-65 (252)
272 3lkd_A Type I restriction-modi 98.6 4.2E-07 1.4E-11 77.8 12.0 94 55-150 206-308 (542)
273 2ar0_A M.ecoki, type I restric 98.6 1.3E-07 4.4E-12 80.9 8.3 110 58-169 157-305 (541)
274 2k4m_A TR8_protein, UPF0146 pr 98.6 1.3E-07 4.4E-12 67.6 6.5 52 47-103 17-70 (153)
275 3cvo_A Methyltransferase-like 98.4 3.7E-06 1.3E-10 63.2 11.8 90 70-169 30-147 (202)
276 3khk_A Type I restriction-modi 98.4 9.9E-07 3.4E-11 75.5 8.7 90 57-150 232-340 (544)
277 2xyq_A Putative 2'-O-methyl tr 98.4 5.9E-07 2E-11 71.2 6.5 95 57-169 49-164 (290)
278 2zig_A TTHA0409, putative modi 98.3 2.2E-06 7.6E-11 67.8 8.9 59 57-118 223-281 (297)
279 3ua3_A Protein arginine N-meth 98.3 8.5E-07 2.9E-11 77.6 6.6 95 71-169 410-527 (745)
280 3s1s_A Restriction endonucleas 98.2 4.7E-06 1.6E-10 74.0 9.9 78 70-149 321-409 (878)
281 3evf_A RNA-directed RNA polyme 98.2 4.6E-06 1.6E-10 65.3 8.6 117 46-169 51-176 (277)
282 4auk_A Ribosomal RNA large sub 98.0 2.9E-05 9.9E-10 63.3 9.1 76 68-155 209-285 (375)
283 1g60_A Adenine-specific methyl 98.0 1.7E-05 5.7E-10 61.5 7.4 61 56-119 199-259 (260)
284 2qy6_A UPF0209 protein YFCK; s 97.9 2.5E-05 8.6E-10 60.7 7.1 99 70-169 60-206 (257)
285 3gcz_A Polyprotein; flavivirus 97.9 7.8E-05 2.7E-09 58.5 9.3 55 47-102 68-124 (282)
286 3o4f_A Spermidine synthase; am 97.8 9E-05 3.1E-09 58.7 8.8 97 70-169 83-191 (294)
287 1wg8_A Predicted S-adenosylmet 97.8 2.5E-05 8.7E-10 61.4 4.8 83 58-145 10-95 (285)
288 3eld_A Methyltransferase; flav 97.7 0.00049 1.7E-08 54.3 12.0 117 46-169 58-183 (300)
289 2oo3_A Protein involved in cat 97.7 7.3E-07 2.5E-11 70.2 -4.3 93 69-165 90-185 (283)
290 3b5i_A S-adenosyl-L-methionine 97.7 9.8E-05 3.4E-09 60.4 8.0 84 71-156 53-167 (374)
291 3ufb_A Type I restriction-modi 97.6 0.00038 1.3E-08 59.3 10.5 90 56-149 203-312 (530)
292 2efj_A 3,7-dimethylxanthine me 97.5 0.00044 1.5E-08 56.7 9.1 86 71-156 53-166 (384)
293 2wk1_A NOVP; transferase, O-me 97.4 0.00046 1.6E-08 54.3 7.7 96 70-169 106-237 (282)
294 2px2_A Genome polyprotein [con 97.4 0.00016 5.6E-09 56.0 4.5 110 46-169 50-175 (269)
295 3lkz_A Non-structural protein 97.3 0.0014 4.8E-08 51.8 9.4 57 45-102 70-128 (321)
296 2c7p_A Modification methylase 97.2 0.0018 6.2E-08 51.8 9.2 71 69-150 9-82 (327)
297 4fzv_A Putative methyltransfer 97.2 0.00095 3.2E-08 54.2 7.5 87 53-145 135-229 (359)
298 3p8z_A Mtase, non-structural p 97.2 0.0032 1.1E-07 48.4 9.7 100 47-154 56-158 (267)
299 1m6e_X S-adenosyl-L-methionnin 97.2 0.00025 8.5E-09 57.7 3.8 83 72-156 53-156 (359)
300 3c6k_A Spermine synthase; sper 97.1 0.00059 2E-08 55.8 5.2 97 70-169 205-324 (381)
301 3g7u_A Cytosine-specific methy 96.7 0.004 1.4E-07 50.8 7.2 74 72-151 3-83 (376)
302 1i4w_A Mitochondrial replicati 96.6 0.0046 1.6E-07 50.1 7.0 43 70-114 58-102 (353)
303 2py6_A Methyltransferase FKBM; 96.4 0.013 4.4E-07 48.2 8.7 46 69-116 225-274 (409)
304 3r24_A NSP16, 2'-O-methyl tran 96.3 0.0093 3.2E-07 47.3 6.4 98 56-169 94-210 (344)
305 2vz8_A Fatty acid synthase; tr 96.2 0.0012 4.1E-08 65.3 1.2 93 71-169 1241-1341(2512)
306 1boo_A Protein (N-4 cytosine-s 96.1 0.0085 2.9E-07 47.7 5.4 61 56-119 239-299 (323)
307 1eg2_A Modification methylase 95.9 0.016 5.4E-07 46.2 6.5 64 54-118 227-291 (319)
308 1g55_A DNA cytosine methyltran 95.9 0.014 4.7E-07 46.9 6.0 70 72-150 3-79 (343)
309 3qv2_A 5-cytosine DNA methyltr 95.5 0.007 2.4E-07 48.4 2.9 71 72-152 11-89 (327)
310 3ubt_Y Modification methylase 95.4 0.039 1.3E-06 43.5 6.9 68 73-150 2-72 (331)
311 2qrv_A DNA (cytosine-5)-methyl 95.4 0.03 1E-06 44.1 6.0 72 70-150 15-94 (295)
312 1zkd_A DUF185; NESG, RPR58, st 95.3 0.088 3E-06 43.0 8.7 58 55-114 62-131 (387)
313 4h0n_A DNMT2; SAH binding, tra 95.2 0.025 8.4E-07 45.3 5.1 72 73-150 5-80 (333)
314 3s2e_A Zinc-containing alcohol 94.4 0.17 5.9E-06 39.9 8.1 57 53-111 149-207 (340)
315 2dph_A Formaldehyde dismutase; 94.1 0.12 4.1E-06 41.8 6.8 48 62-111 177-227 (398)
316 1f8f_A Benzyl alcohol dehydrog 94.0 0.24 8.1E-06 39.6 8.2 72 37-111 157-232 (371)
317 4f3n_A Uncharacterized ACR, CO 93.6 0.17 5.8E-06 41.9 6.8 59 55-115 122-187 (432)
318 3tka_A Ribosomal RNA small sub 93.5 0.099 3.4E-06 42.1 5.1 52 58-111 45-99 (347)
319 4dcm_A Ribosomal RNA large sub 93.4 0.62 2.1E-05 37.6 9.9 109 46-169 16-129 (375)
320 3two_A Mannitol dehydrogenase; 93.1 0.23 8E-06 39.3 6.7 57 53-111 159-217 (348)
321 4ej6_A Putative zinc-binding d 92.7 0.48 1.6E-05 37.9 8.1 72 37-112 151-225 (370)
322 1kol_A Formaldehyde dehydrogen 92.2 0.42 1.4E-05 38.5 7.3 48 62-111 177-227 (398)
323 1p0f_A NADP-dependent alcohol 92.2 0.47 1.6E-05 37.9 7.5 71 37-111 159-233 (373)
324 4fn4_A Short chain dehydrogena 92.1 0.58 2E-05 35.8 7.6 79 69-149 5-94 (254)
325 1uuf_A YAHK, zinc-type alcohol 92.0 0.34 1.2E-05 38.8 6.4 52 58-111 182-235 (369)
326 4iin_A 3-ketoacyl-acyl carrier 91.8 0.65 2.2E-05 35.2 7.6 101 50-151 8-119 (271)
327 1piw_A Hypothetical zinc-type 91.5 0.46 1.6E-05 37.8 6.6 55 55-111 164-220 (360)
328 3fpc_A NADP-dependent alcohol 91.4 0.53 1.8E-05 37.2 6.9 55 56-112 152-209 (352)
329 1pl8_A Human sorbitol dehydrog 91.3 0.51 1.7E-05 37.4 6.7 46 64-111 165-213 (356)
330 3goh_A Alcohol dehydrogenase, 91.2 0.5 1.7E-05 36.7 6.5 57 52-111 124-182 (315)
331 4hp8_A 2-deoxy-D-gluconate 3-d 91.2 1.3 4.3E-05 33.8 8.5 84 65-152 3-92 (247)
332 3uog_A Alcohol dehydrogenase; 91.1 0.75 2.6E-05 36.6 7.5 57 53-111 171-230 (363)
333 3me5_A Cytosine-specific methy 90.8 0.39 1.3E-05 40.3 5.8 41 72-114 89-130 (482)
334 2h6e_A ADH-4, D-arabinose 1-de 90.8 0.7 2.4E-05 36.4 7.0 42 67-111 168-213 (344)
335 4g81_D Putative hexonate dehyd 90.7 0.74 2.5E-05 35.2 6.9 84 68-153 6-100 (255)
336 1rjw_A ADH-HT, alcohol dehydro 90.7 0.93 3.2E-05 35.6 7.7 51 59-111 153-205 (339)
337 3vyw_A MNMC2; tRNA wobble urid 90.2 0.98 3.3E-05 35.7 7.2 96 72-169 98-219 (308)
338 1e3j_A NADP(H)-dependent ketos 90.2 0.76 2.6E-05 36.3 6.7 46 64-111 162-209 (352)
339 2hcy_A Alcohol dehydrogenase 1 90.0 0.86 2.9E-05 35.9 6.9 55 55-111 154-211 (347)
340 1rjd_A PPM1P, carboxy methyl t 89.8 0.92 3.1E-05 36.1 6.9 95 71-166 98-223 (334)
341 1e3i_A Alcohol dehydrogenase, 89.4 0.56 1.9E-05 37.5 5.4 46 64-111 189-237 (376)
342 1h2b_A Alcohol dehydrogenase; 89.1 1.3 4.6E-05 35.0 7.4 44 66-111 182-228 (359)
343 1cdo_A Alcohol dehydrogenase; 89.0 0.61 2.1E-05 37.2 5.4 46 64-111 186-234 (374)
344 3uko_A Alcohol dehydrogenase c 88.9 1.1 3.6E-05 35.9 6.7 57 53-111 175-235 (378)
345 1pqw_A Polyketide synthase; ro 88.9 0.47 1.6E-05 34.1 4.2 43 66-110 34-79 (198)
346 1jvb_A NAD(H)-dependent alcoho 88.9 1.4 4.8E-05 34.7 7.4 51 59-111 159-213 (347)
347 2fzw_A Alcohol dehydrogenase c 88.8 0.68 2.3E-05 36.9 5.5 46 64-111 184-232 (373)
348 3gms_A Putative NADPH:quinone 88.7 1 3.5E-05 35.4 6.4 47 64-112 138-187 (340)
349 2eih_A Alcohol dehydrogenase; 88.2 1.7 6E-05 34.0 7.5 52 58-111 153-208 (343)
350 3m6i_A L-arabinitol 4-dehydrog 88.2 1.1 3.7E-05 35.5 6.3 48 63-112 172-222 (363)
351 3jv7_A ADH-A; dehydrogenase, n 88.2 1.2 4.2E-05 34.9 6.6 52 58-111 157-213 (345)
352 3jyo_A Quinate/shikimate dehyd 88.1 1.5 5.3E-05 33.9 7.0 40 62-102 118-161 (283)
353 2jhf_A Alcohol dehydrogenase E 88.0 0.78 2.7E-05 36.6 5.4 46 64-111 185-233 (374)
354 1v3u_A Leukotriene B4 12- hydr 87.9 1.5 5.1E-05 34.2 6.9 52 57-110 131-186 (333)
355 4da9_A Short-chain dehydrogena 87.7 3 0.0001 31.7 8.4 81 68-149 26-117 (280)
356 2cf5_A Atccad5, CAD, cinnamyl 87.6 1.6 5.5E-05 34.5 7.0 45 59-103 168-215 (357)
357 4b7c_A Probable oxidoreductase 87.6 1.1 3.8E-05 35.0 6.0 57 52-110 130-190 (336)
358 3jyn_A Quinone oxidoreductase; 87.5 0.71 2.4E-05 36.1 4.8 44 66-111 136-182 (325)
359 1vj0_A Alcohol dehydrogenase, 87.4 1.8 6E-05 34.7 7.2 51 59-111 183-237 (380)
360 3fbg_A Putative arginate lyase 87.1 1.1 3.9E-05 35.2 5.8 58 53-112 126-193 (346)
361 2d8a_A PH0655, probable L-thre 87.0 1.9 6.4E-05 33.9 7.0 50 59-111 157-209 (348)
362 3ucx_A Short chain dehydrogena 86.9 4.2 0.00014 30.5 8.7 80 68-149 8-98 (264)
363 4dvj_A Putative zinc-dependent 86.7 0.83 2.9E-05 36.4 4.8 57 53-111 148-214 (363)
364 4eye_A Probable oxidoreductase 85.8 1.4 4.8E-05 34.6 5.7 54 56-111 144-201 (342)
365 2j3h_A NADP-dependent oxidored 85.7 1.8 6.3E-05 33.8 6.4 55 55-111 139-197 (345)
366 3is3_A 17BETA-hydroxysteroid d 85.7 3.5 0.00012 31.1 7.7 83 68-151 15-108 (270)
367 4dkj_A Cytosine-specific methy 85.6 1.1 3.8E-05 36.7 5.1 44 70-115 9-59 (403)
368 3tjr_A Short chain dehydrogena 85.4 4.1 0.00014 31.3 8.1 81 68-150 28-119 (301)
369 1yqd_A Sinapyl alcohol dehydro 85.3 2.4 8.2E-05 33.7 6.9 50 53-102 169-221 (366)
370 4ft4_B DNA (cytosine-5)-methyl 85.0 1.1 3.9E-05 39.5 5.2 39 73-113 214-259 (784)
371 3rkr_A Short chain oxidoreduct 85.0 3.6 0.00012 30.8 7.5 79 68-149 26-116 (262)
372 3swr_A DNA (cytosine-5)-methyl 84.7 1.9 6.4E-05 39.5 6.5 40 72-113 541-582 (1002)
373 3h7a_A Short chain dehydrogena 84.6 2.5 8.5E-05 31.6 6.4 81 69-151 5-95 (252)
374 3tqh_A Quinone oxidoreductase; 84.6 0.85 2.9E-05 35.5 3.8 48 53-100 135-185 (321)
375 3pvc_A TRNA 5-methylaminomethy 84.3 2 6.8E-05 37.3 6.4 97 72-169 60-204 (689)
376 4dup_A Quinone oxidoreductase; 84.3 2.8 9.7E-05 33.0 6.9 54 57-112 153-210 (353)
377 3iup_A Putative NADPH:quinone 84.3 1.9 6.5E-05 34.5 5.9 41 69-111 169-213 (379)
378 3tfo_A Putative 3-oxoacyl-(acy 84.2 3.7 0.00013 31.0 7.3 81 69-151 2-93 (264)
379 3qwb_A Probable quinone oxidor 84.2 2.8 9.7E-05 32.6 6.8 43 67-111 145-190 (334)
380 3ip1_A Alcohol dehydrogenase, 84.0 3.8 0.00013 33.0 7.6 43 67-111 210-255 (404)
381 3lyl_A 3-oxoacyl-(acyl-carrier 83.9 4.1 0.00014 30.0 7.3 80 69-151 3-94 (247)
382 3qiv_A Short-chain dehydrogena 83.7 4.9 0.00017 29.6 7.7 78 69-149 7-96 (253)
383 3gaf_A 7-alpha-hydroxysteroid 83.5 5.3 0.00018 29.8 7.9 81 68-150 9-100 (256)
384 2cdc_A Glucose dehydrogenase g 83.4 4.3 0.00015 32.1 7.6 32 71-102 181-214 (366)
385 3gaz_A Alcohol dehydrogenase s 83.4 3.5 0.00012 32.3 7.0 56 53-111 132-191 (343)
386 3ftp_A 3-oxoacyl-[acyl-carrier 83.3 4 0.00014 30.9 7.1 80 69-150 26-116 (270)
387 1nyt_A Shikimate 5-dehydrogena 83.1 11 0.00038 28.5 9.6 43 58-102 106-152 (271)
388 1yb5_A Quinone oxidoreductase; 82.7 3.5 0.00012 32.5 6.8 51 58-110 157-211 (351)
389 4eez_A Alcohol dehydrogenase 1 82.3 3.8 0.00013 32.0 6.8 39 64-102 157-198 (348)
390 3ioy_A Short-chain dehydrogena 82.2 7.4 0.00025 30.1 8.5 81 68-150 5-98 (319)
391 3o38_A Short chain dehydrogena 82.1 6.7 0.00023 29.2 7.9 82 68-151 19-113 (266)
392 1yb1_A 17-beta-hydroxysteroid 81.9 7.4 0.00025 29.2 8.2 82 67-151 27-120 (272)
393 1qor_A Quinone oxidoreductase; 81.9 3.5 0.00012 32.0 6.4 45 66-112 136-183 (327)
394 3sju_A Keto reductase; short-c 81.8 4.8 0.00017 30.5 7.1 81 69-151 22-113 (279)
395 3ijr_A Oxidoreductase, short c 81.6 5.9 0.0002 30.2 7.6 81 68-149 44-135 (291)
396 1iz0_A Quinone oxidoreductase; 81.6 1.8 6.1E-05 33.3 4.6 35 68-102 123-160 (302)
397 3tnl_A Shikimate dehydrogenase 81.5 7.6 0.00026 30.5 8.2 40 61-101 144-187 (315)
398 3imf_A Short chain dehydrogena 81.1 3.8 0.00013 30.6 6.2 80 68-150 3-94 (257)
399 3v2g_A 3-oxoacyl-[acyl-carrier 81.1 7.2 0.00025 29.4 7.8 83 68-151 28-121 (271)
400 2jah_A Clavulanic acid dehydro 80.9 8.4 0.00029 28.5 8.1 79 69-150 5-95 (247)
401 4a2c_A Galactitol-1-phosphate 80.9 4.2 0.00014 31.7 6.6 47 63-111 153-202 (346)
402 3pwz_A Shikimate dehydrogenase 80.8 13 0.00044 28.5 9.2 34 68-102 117-154 (272)
403 3h8v_A Ubiquitin-like modifier 80.8 4 0.00014 31.9 6.3 35 68-102 33-70 (292)
404 4fgs_A Probable dehydrogenase 80.4 4.9 0.00017 30.9 6.7 78 68-150 26-114 (273)
405 2dq4_A L-threonine 3-dehydroge 80.1 2.2 7.4E-05 33.5 4.7 37 65-102 160-199 (343)
406 4b79_A PA4098, probable short- 80.0 2.6 9.1E-05 31.9 4.9 37 66-102 6-45 (242)
407 2j8z_A Quinone oxidoreductase; 80.0 4.3 0.00015 31.9 6.5 52 57-110 148-203 (354)
408 1jw9_B Molybdopterin biosynthe 80.0 2.8 9.5E-05 31.7 5.1 33 70-102 30-65 (249)
409 1wly_A CAAR, 2-haloacrylate re 79.7 6.2 0.00021 30.6 7.2 44 66-111 141-187 (333)
410 4egf_A L-xylulose reductase; s 79.6 7.2 0.00025 29.2 7.4 81 69-151 18-110 (266)
411 3e8x_A Putative NAD-dependent 79.6 15 0.00051 26.6 9.0 80 68-156 18-101 (236)
412 2zat_A Dehydrogenase/reductase 79.6 8 0.00027 28.7 7.6 79 68-149 11-101 (260)
413 4fs3_A Enoyl-[acyl-carrier-pro 79.4 8.1 0.00028 28.9 7.6 79 68-148 3-95 (256)
414 3pgx_A Carveol dehydrogenase; 79.4 8.3 0.00028 29.0 7.7 85 67-151 11-117 (280)
415 3v8b_A Putative dehydrogenase, 78.8 6.8 0.00023 29.8 7.1 79 69-149 26-115 (283)
416 2c0c_A Zinc binding alcohol de 78.6 5.3 0.00018 31.5 6.6 43 67-111 160-205 (362)
417 3o8q_A Shikimate 5-dehydrogena 78.5 20 0.0007 27.5 10.2 40 62-102 117-160 (281)
418 3i1j_A Oxidoreductase, short c 78.3 9.3 0.00032 27.9 7.5 81 67-150 10-105 (247)
419 2rhc_B Actinorhodin polyketide 78.2 9.7 0.00033 28.7 7.8 79 69-150 20-110 (277)
420 3r1i_A Short-chain type dehydr 78.0 6.3 0.00021 29.8 6.6 82 68-151 29-121 (276)
421 3t7c_A Carveol dehydrogenase; 77.9 11 0.00037 28.8 8.0 83 68-150 25-128 (299)
422 3krt_A Crotonyl COA reductase; 77.9 5.6 0.00019 32.6 6.7 43 67-111 225-270 (456)
423 3av4_A DNA (cytosine-5)-methyl 77.8 4.2 0.00014 38.4 6.4 42 71-114 851-894 (1330)
424 1fmc_A 7 alpha-hydroxysteroid 77.8 11 0.00037 27.6 7.8 79 69-150 9-99 (255)
425 3r3s_A Oxidoreductase; structu 77.7 6 0.00021 30.2 6.5 81 68-149 46-138 (294)
426 1ae1_A Tropinone reductase-I; 77.5 11 0.00037 28.3 7.8 79 69-150 19-110 (273)
427 3sx2_A Putative 3-ketoacyl-(ac 77.4 12 0.0004 28.0 8.0 83 68-150 10-113 (278)
428 4imr_A 3-oxoacyl-(acyl-carrier 77.2 5.9 0.0002 30.0 6.2 81 68-150 30-120 (275)
429 3edm_A Short chain dehydrogena 77.2 9.1 0.00031 28.5 7.3 79 68-148 5-95 (259)
430 1zem_A Xylitol dehydrogenase; 77.1 9.6 0.00033 28.3 7.4 78 69-149 5-94 (262)
431 2ae2_A Protein (tropinone redu 77.0 11 0.00038 27.9 7.7 79 69-150 7-98 (260)
432 3tsc_A Putative oxidoreductase 77.0 12 0.0004 28.1 7.9 85 68-152 8-114 (277)
433 4ibo_A Gluconate dehydrogenase 77.0 5.4 0.00018 30.2 5.9 82 68-151 23-115 (271)
434 4fc7_A Peroxisomal 2,4-dienoyl 76.8 9.1 0.00031 28.8 7.2 81 68-150 24-116 (277)
435 3uf0_A Short-chain dehydrogena 76.7 9.1 0.00031 28.9 7.2 81 68-151 28-118 (273)
436 4a0s_A Octenoyl-COA reductase/ 76.6 6.4 0.00022 32.0 6.6 44 66-111 216-262 (447)
437 4dmm_A 3-oxoacyl-[acyl-carrier 76.5 10 0.00034 28.5 7.4 82 69-151 26-118 (269)
438 3tox_A Short chain dehydrogena 76.2 4.5 0.00015 30.8 5.3 81 68-150 5-96 (280)
439 1iy8_A Levodione reductase; ox 76.1 12 0.00043 27.7 7.8 79 69-150 11-103 (267)
440 3h5n_A MCCB protein; ubiquitin 76.0 26 0.00089 27.8 9.9 32 70-101 117-151 (353)
441 1vl8_A Gluconate 5-dehydrogena 75.9 14 0.00047 27.7 8.0 80 68-150 18-110 (267)
442 3awd_A GOX2181, putative polyo 75.9 13 0.00044 27.3 7.8 78 69-149 11-100 (260)
443 2qq5_A DHRS1, dehydrogenase/re 75.8 10 0.00035 28.1 7.2 76 69-147 3-91 (260)
444 2b5w_A Glucose dehydrogenase; 75.7 2.7 9.1E-05 33.2 4.0 31 72-102 174-209 (357)
445 3u5t_A 3-oxoacyl-[acyl-carrier 75.5 10 0.00034 28.5 7.1 82 69-151 25-117 (267)
446 4dry_A 3-oxoacyl-[acyl-carrier 75.4 6.4 0.00022 29.9 6.0 80 68-150 30-122 (281)
447 3pxx_A Carveol dehydrogenase; 75.3 9.7 0.00033 28.5 7.0 83 68-150 7-110 (287)
448 1p77_A Shikimate 5-dehydrogena 75.1 24 0.00083 26.6 11.0 44 57-102 105-152 (272)
449 3ado_A Lambda-crystallin; L-gu 75.1 5.6 0.00019 31.4 5.7 42 72-115 7-50 (319)
450 3cxt_A Dehydrogenase with diff 74.9 13 0.00045 28.3 7.8 79 69-150 32-122 (291)
451 3svt_A Short-chain type dehydr 74.6 13 0.00043 28.0 7.5 49 69-119 9-60 (281)
452 1wma_A Carbonyl reductase [NAD 74.6 13 0.00046 27.2 7.6 77 70-149 3-92 (276)
453 3pk0_A Short-chain dehydrogena 74.5 10 0.00034 28.3 6.9 80 68-150 7-99 (262)
454 3lk7_A UDP-N-acetylmuramoylala 74.3 14 0.00047 30.2 8.1 73 68-149 6-82 (451)
455 2zb4_A Prostaglandin reductase 74.2 7.4 0.00025 30.5 6.3 46 64-111 152-203 (357)
456 3f1l_A Uncharacterized oxidore 74.1 12 0.0004 27.7 7.1 80 68-149 9-102 (252)
457 2gdz_A NAD+-dependent 15-hydro 73.9 23 0.00079 26.2 8.8 88 69-159 5-106 (267)
458 3ai3_A NADPH-sorbose reductase 73.9 16 0.00055 27.0 7.9 79 69-150 5-96 (263)
459 3s55_A Putative short-chain de 73.2 17 0.00059 27.2 8.0 84 68-151 7-111 (281)
460 3llv_A Exopolyphosphatase-rela 73.0 9.5 0.00033 25.3 5.9 37 71-111 6-46 (141)
461 1sby_A Alcohol dehydrogenase; 72.9 13 0.00046 27.2 7.2 89 69-160 3-105 (254)
462 1xkq_A Short-chain reductase f 72.9 11 0.00039 28.2 6.9 79 69-150 4-97 (280)
463 3fwz_A Inner membrane protein 72.8 5.1 0.00017 27.0 4.4 36 72-111 8-47 (140)
464 2vn8_A Reticulon-4-interacting 72.8 3.7 0.00013 32.6 4.2 33 68-100 181-216 (375)
465 3rku_A Oxidoreductase YMR226C; 72.7 17 0.00058 27.6 7.8 79 69-150 31-126 (287)
466 3eag_A UDP-N-acetylmuramate:L- 72.5 23 0.00079 27.5 8.8 71 71-150 4-77 (326)
467 3osu_A 3-oxoacyl-[acyl-carrier 72.5 15 0.0005 27.0 7.3 79 70-150 3-93 (246)
468 4eue_A Putative reductase CA_C 72.3 7.2 0.00025 31.9 5.9 44 59-102 48-96 (418)
469 1e7w_A Pteridine reductase; di 72.2 14 0.00048 28.0 7.3 59 69-130 7-71 (291)
470 1g0o_A Trihydroxynaphthalene r 72.1 14 0.00048 27.8 7.2 81 69-151 27-119 (283)
471 2uvd_A 3-oxoacyl-(acyl-carrier 72.0 15 0.00052 26.9 7.3 80 69-150 2-93 (246)
472 3t4x_A Oxidoreductase, short c 71.8 19 0.00066 26.7 7.9 80 69-151 8-97 (267)
473 3nyw_A Putative oxidoreductase 71.8 20 0.00069 26.4 8.0 81 69-151 5-99 (250)
474 3gvc_A Oxidoreductase, probabl 71.8 15 0.00053 27.7 7.4 78 68-150 26-114 (277)
475 3rwb_A TPLDH, pyridoxal 4-dehy 71.7 13 0.00045 27.4 6.9 35 68-102 3-40 (247)
476 3nx4_A Putative oxidoreductase 71.7 4 0.00014 31.5 4.1 80 73-168 149-233 (324)
477 3lf2_A Short chain oxidoreduct 71.2 28 0.00097 25.8 8.7 81 68-150 5-98 (265)
478 4gkb_A 3-oxoacyl-[acyl-carrier 70.7 10 0.00035 28.7 6.1 80 68-150 4-94 (258)
479 3uve_A Carveol dehydrogenase ( 70.6 12 0.0004 28.2 6.4 83 68-150 8-115 (286)
480 1xhl_A Short-chain dehydrogena 70.6 15 0.00052 28.0 7.2 79 69-150 24-117 (297)
481 3hn7_A UDP-N-acetylmuramate-L- 70.5 16 0.00055 30.6 7.8 72 68-149 16-90 (524)
482 3l77_A Short-chain alcohol deh 70.5 22 0.00074 25.7 7.8 78 71-151 2-92 (235)
483 3qlj_A Short chain dehydrogena 70.1 13 0.00045 28.6 6.8 82 68-151 24-126 (322)
484 3ppi_A 3-hydroxyacyl-COA dehyd 69.9 14 0.00046 27.7 6.7 74 68-146 27-110 (281)
485 4eso_A Putative oxidoreductase 69.5 14 0.00048 27.4 6.6 43 68-112 5-50 (255)
486 3hwr_A 2-dehydropantoate 2-red 69.2 13 0.00045 28.7 6.6 88 69-168 17-112 (318)
487 3oec_A Carveol dehydrogenase ( 68.8 21 0.00073 27.4 7.7 83 68-150 43-146 (317)
488 3icc_A Putative 3-oxoacyl-(acy 68.7 16 0.00054 26.7 6.7 55 68-124 4-62 (255)
489 3oig_A Enoyl-[acyl-carrier-pro 68.5 20 0.0007 26.4 7.4 80 69-150 5-98 (266)
490 3rih_A Short chain dehydrogena 68.5 7.6 0.00026 29.8 5.0 81 68-150 38-130 (293)
491 1lu9_A Methylene tetrahydromet 68.4 25 0.00086 26.6 8.0 76 68-148 116-197 (287)
492 1xq1_A Putative tropinone redu 68.1 19 0.00065 26.5 7.1 78 69-149 12-102 (266)
493 3o26_A Salutaridine reductase; 67.8 12 0.0004 28.2 6.0 79 69-150 10-102 (311)
494 3kkj_A Amine oxidase, flavin-c 67.6 4.2 0.00014 28.9 3.2 30 73-102 4-35 (336)
495 1w6u_A 2,4-dienoyl-COA reducta 67.5 27 0.00092 26.2 8.0 79 69-150 24-115 (302)
496 4hv4_A UDP-N-acetylmuramate--L 67.4 38 0.0013 28.0 9.4 69 70-150 21-92 (494)
497 1zud_1 Adenylyltransferase THI 67.4 8.4 0.00029 29.0 5.0 32 70-101 27-61 (251)
498 3i4f_A 3-oxoacyl-[acyl-carrier 67.3 12 0.00041 27.7 5.8 78 70-148 6-94 (264)
499 1xg5_A ARPG836; short chain de 67.2 34 0.0012 25.4 8.4 47 69-118 30-80 (279)
500 1geg_A Acetoin reductase; SDR 66.8 25 0.00086 25.8 7.6 77 71-150 2-90 (256)
No 1
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.86 E-value=1.5e-21 Score=154.47 Aligned_cols=122 Identities=24% Similarity=0.254 Sum_probs=95.2
Q ss_pred cCCcceeecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcC-CCcHHHHHHHHHHH-----HH
Q 030935 44 KEEYGLFVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDD-SNRIEVLKNMRRVC-----EM 116 (169)
Q Consensus 44 ~~~~g~~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~-~~~~~~l~~~~~n~-----~~ 116 (169)
...+|..+||++..|++++..+....++++|||||||+|.+++.+++.|+ +|+++|+ + +.+++.+++|+ +.
T Consensus 53 ~~~~g~~~~~~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~--~~~~~~a~~n~~~N~~~~ 130 (281)
T 3bzb_A 53 HPLWTSHVWSGARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPD--PEILNSLESNIREHTANS 130 (281)
T ss_dssp ---------CHHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSC--HHHHHHHHHHHHTTCC--
T ss_pred CCCCCceeecHHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCC--HHHHHHHHHHHHHhhhhh
Confidence 45689999999999999999887667889999999999999999999988 8999999 7 57999999999 44
Q ss_pred hCC------cceEEEEEcCCCCcCC----CCCCCcEEEEcCcCCCCCChHHHHHHHHHhcc
Q 030935 117 NKL------NCRVMGLTWGFLDASI----FDLNPNIILGADVFYDASGKICAFEILICSLF 167 (169)
Q Consensus 117 n~~------~~~~~~l~~~~~~~~~----~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~ 167 (169)
+++ .+.+..++|++..... ...+||+|+++|++|+....+.+++.+.+.|+
T Consensus 131 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk 191 (281)
T 3bzb_A 131 CSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLA 191 (281)
T ss_dssp --------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBC
T ss_pred cccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhc
Confidence 443 3556667798753322 24689999999999999999999999999999
No 2
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.68 E-value=1.1e-16 Score=131.43 Aligned_cols=104 Identities=19% Similarity=0.221 Sum_probs=85.4
Q ss_pred HHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCC
Q 030935 62 VWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNP 140 (169)
Q Consensus 62 l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~f 140 (169)
|.++...++|++|||||||||++++++|+.|| +|+++|.++ +++.|+++++.|++..++. +..++......+.+|
T Consensus 75 i~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~---~~~~a~~~~~~n~~~~~i~-~i~~~~~~~~lpe~~ 150 (376)
T 4hc4_A 75 ILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA---IWQQAREVVRFNGLEDRVH-VLPGPVETVELPEQV 150 (376)
T ss_dssp HHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST---THHHHHHHHHHTTCTTTEE-EEESCTTTCCCSSCE
T ss_pred HHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH---HHHHHHHHHHHcCCCceEE-EEeeeeeeecCCccc
Confidence 55555667899999999999999999999998 799999984 8899999999999876554 334554443445799
Q ss_pred cEEEE---cCcCCCCCChHHHHHHHHHhccCC
Q 030935 141 NIILG---ADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 141 DlIi~---sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
|+|++ ...+.+...++.++....+.|+|+
T Consensus 151 DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~ 182 (376)
T 4hc4_A 151 DAIVSEWMGYGLLHESMLSSVLHARTKWLKEG 182 (376)
T ss_dssp EEEECCCCBTTBTTTCSHHHHHHHHHHHEEEE
T ss_pred cEEEeecccccccccchhhhHHHHHHhhCCCC
Confidence 99998 556677889999999999999985
No 3
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.66 E-value=8.6e-16 Score=118.47 Aligned_cols=111 Identities=19% Similarity=0.046 Sum_probs=87.0
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC
Q 030935 56 VILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS 134 (169)
Q Consensus 56 ~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~ 134 (169)
....+.+.......++.+|||+|||+|..+..+++. +.+|+++|++ +.+++.++++++.+++..++. +..++....
T Consensus 22 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~~~v~-~~~~d~~~~ 98 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMS--SLFTAQAKRRAEELGVSERVH-FIHNDAAGY 98 (256)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESC--HHHHHHHHHHHHHTTCTTTEE-EEESCCTTC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCC--HHHHHHHHHHHHhcCCCcceE-EEECChHhC
Confidence 344555555555567889999999999999998876 6799999999 579999999999887752222 223333222
Q ss_pred CCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 135 IFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 135 ~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
..+.+||+|++..++++..+...+++.+.+.|+|+
T Consensus 99 ~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg 133 (256)
T 1nkv_A 99 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG 133 (256)
T ss_dssp CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE
T ss_pred CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC
Confidence 23568999999999999999999999999999985
No 4
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.66 E-value=6.5e-16 Score=120.32 Aligned_cols=124 Identities=11% Similarity=0.115 Sum_probs=91.5
Q ss_pred EEEeccccCCcceeecchHHHHHHHHHhccCCC-CCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHH
Q 030935 37 IAIIENMKEEYGLFVWPCSVILAEYVWQQRYRF-SGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVC 114 (169)
Q Consensus 37 i~i~~~~~~~~g~~~W~~~~~La~~l~~~~~~~-~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~ 114 (169)
+++.|.. .+++....+.+|+.|+. .. ++.+|||+|||+|.+++.+++.+. +|+++|++ +.+++.+++|+
T Consensus 22 ~~i~q~~---~~~~~~~d~~ll~~~~~----~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~--~~~~~~a~~n~ 92 (259)
T 3lpm_A 22 LRIIQSP---SVFSFSIDAVLLAKFSY----LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQ--ERLADMAKRSV 92 (259)
T ss_dssp EEEEEBT---TTBCCCHHHHHHHHHCC----CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCS--HHHHHHHHHHH
T ss_pred EEEEeCC---CCccCcHHHHHHHHHhc----CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECC--HHHHHHHHHHH
Confidence 5555554 56677778888888862 23 578999999999999999999876 99999999 57999999999
Q ss_pred HHhCCcc--eEEEEEcCCCCcCCCCCCCcEEEEcCcCCCC--------------------CChHHHHHHHHHhccCC
Q 030935 115 EMNKLNC--RVMGLTWGFLDASIFDLNPNIILGADVFYDA--------------------SGKICAFEILICSLFPI 169 (169)
Q Consensus 115 ~~n~~~~--~~~~l~~~~~~~~~~~~~fDlIi~sd~iy~~--------------------~~~~~l~~~l~~~L~p~ 169 (169)
..+++.. ++...++.+........+||+|+++.++|.. ..++.+++.+.+.|+|+
T Consensus 93 ~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg 169 (259)
T 3lpm_A 93 AYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQG 169 (259)
T ss_dssp HHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEE
T ss_pred HHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCC
Confidence 9998863 3333333322222335699999998777655 23567999999999985
No 5
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.66 E-value=2.1e-16 Score=117.28 Aligned_cols=117 Identities=15% Similarity=0.084 Sum_probs=82.8
Q ss_pred ecchHHHHHHHHHhccC---CCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEE
Q 030935 51 VWPCSVILAEYVWQQRY---RFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMG 125 (169)
Q Consensus 51 ~W~~~~~La~~l~~~~~---~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~ 125 (169)
.+|.+..+.+.+..... ..++.+|||+|||+|.+++.+++.++ +|+++|++ +.+++.+++|++.+++. +++..
T Consensus 22 ~rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~v~~~~ 99 (189)
T 3p9n_A 22 TRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESD--QRSAAVIARNIEALGLSGATLRR 99 (189)
T ss_dssp C---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECC--HHHHHHHHHHHHHHTCSCEEEEE
T ss_pred CccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECC--HHHHHHHHHHHHHcCCCceEEEE
Confidence 45555555555543321 25788999999999999998888776 79999999 57999999999998872 33333
Q ss_pred EEcCCCCcCCCCCCCcEEEEcCcCCCC-CChHHHHHHHHH--hccCC
Q 030935 126 LTWGFLDASIFDLNPNIILGADVFYDA-SGKICAFEILIC--SLFPI 169 (169)
Q Consensus 126 l~~~~~~~~~~~~~fDlIi~sd~iy~~-~~~~~l~~~l~~--~L~p~ 169 (169)
.++.+......+.+||+|++..++++. ...+.+++.+.+ .|+|+
T Consensus 100 ~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pg 146 (189)
T 3p9n_A 100 GAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREG 146 (189)
T ss_dssp SCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTT
T ss_pred ccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCC
Confidence 322222111225699999997665443 678899999999 99996
No 6
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.64 E-value=4.7e-15 Score=115.44 Aligned_cols=114 Identities=16% Similarity=0.099 Sum_probs=90.7
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCC
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFL 131 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~ 131 (169)
++...+.+.+.+.....++.+|||+|||+|..+..+++. +.+|+++|++ +.+++.+++++..+++..++. +..++.
T Consensus 44 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~~~-~~~~d~ 120 (273)
T 3bus_A 44 DATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISIS--RPQVNQANARATAAGLANRVT-FSYADA 120 (273)
T ss_dssp HHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESC--HHHHHHHHHHHHHTTCTTTEE-EEECCT
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCC--HHHHHHHHHHHHhcCCCcceE-EEECcc
Confidence 445566677777666667889999999999999999875 6799999999 569999999998887653322 222333
Q ss_pred Cc-CCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 132 DA-SIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 132 ~~-~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.. +..+.+||+|++.+++++..+.+.+++.+.+.|+|+
T Consensus 121 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg 159 (273)
T 3bus_A 121 MDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPG 159 (273)
T ss_dssp TSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE
T ss_pred ccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC
Confidence 22 333468999999999999999999999999999985
No 7
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.63 E-value=5e-15 Score=114.24 Aligned_cols=114 Identities=16% Similarity=0.041 Sum_probs=88.5
Q ss_pred cchHHHHHHHHHhcc-CCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcC
Q 030935 52 WPCSVILAEYVWQQR-YRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWG 129 (169)
Q Consensus 52 W~~~~~La~~l~~~~-~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~ 129 (169)
.|.+..+...+.... ...++.+|||+|||+|..++.+++.+. +|+++|++ +.+++.+++++..+++..++. +..+
T Consensus 27 ~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~-~~~~ 103 (257)
T 3f4k_A 27 GPGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLF--PDFIEIFNENAVKANCADRVK-GITG 103 (257)
T ss_dssp SSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESC--HHHHHHHHHHHHHTTCTTTEE-EEEC
T ss_pred CCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECC--HHHHHHHHHHHHHcCCCCceE-EEEC
Confidence 345555555555544 344677999999999999999999865 99999999 579999999999988764332 2223
Q ss_pred CCCc-CCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 130 FLDA-SIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 130 ~~~~-~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+... +..+.+||+|++..++++. +.+.+++.+.+.|+|+
T Consensus 104 d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pg 143 (257)
T 3f4k_A 104 SMDNLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKG 143 (257)
T ss_dssp CTTSCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEE
T ss_pred ChhhCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCC
Confidence 3322 2345699999999999998 7999999999999985
No 8
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.62 E-value=2.9e-15 Score=112.32 Aligned_cols=113 Identities=19% Similarity=0.158 Sum_probs=87.2
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCC
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFL 131 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~ 131 (169)
|....+++.+.......++ +|||+|||+|..+..+++. +.+|+++|++ +.+++.+++++..++...++. +..++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s--~~~~~~a~~~~~~~~~~~~~~-~~~~d~ 102 (219)
T 3dlc_A 27 PIYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFS--KHMNEIALKNIADANLNDRIQ-IVQGDV 102 (219)
T ss_dssp THHHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESC--HHHHHHHHHHHHHTTCTTTEE-EEECBT
T ss_pred cccHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECC--HHHHHHHHHHHHhccccCceE-EEEcCH
Confidence 3344556666555443334 9999999999999999987 5699999999 579999999999887753332 223333
Q ss_pred Cc-CCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 132 DA-SIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 132 ~~-~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.. +..+.+||+|+++.++++..+...+++.+.+.|+|+
T Consensus 103 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg 141 (219)
T 3dlc_A 103 HNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSG 141 (219)
T ss_dssp TBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE
T ss_pred HHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCC
Confidence 22 334568999999999999999999999999999985
No 9
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.61 E-value=7.9e-15 Score=115.70 Aligned_cols=112 Identities=17% Similarity=0.140 Sum_probs=87.6
Q ss_pred HHHHHHHHHhcc----CCCCCCeEEEECCCCCHHHHHHHHh-CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcC
Q 030935 55 SVILAEYVWQQR----YRFSGANVVELGAGTSLPGLVAAKV-GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWG 129 (169)
Q Consensus 55 ~~~La~~l~~~~----~~~~~~~vLElGcGtGl~~l~~a~~-ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~ 129 (169)
...+.+.+.... ...++.+|||+|||+|..+..+++. +.+|+++|++ +.+++.+++++...++..++. +..+
T Consensus 63 ~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~~~-~~~~ 139 (297)
T 2o57_A 63 SLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIA--PVQNKRNEEYNNQAGLADNIT-VKYG 139 (297)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESC--HHHHHHHHHHHHHHTCTTTEE-EEEC
T ss_pred HHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCC--HHHHHHHHHHHHhcCCCcceE-EEEc
Confidence 344455555544 4557889999999999999999886 8899999999 569999999998887653322 2233
Q ss_pred CCCc-CCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 130 FLDA-SIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 130 ~~~~-~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+... +..+.+||+|++..++++..+...+++.+.+.|+|+
T Consensus 140 d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg 180 (297)
T 2o57_A 140 SFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR 180 (297)
T ss_dssp CTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE
T ss_pred CcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCC
Confidence 3322 334568999999999999999999999999999985
No 10
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.61 E-value=9.3e-15 Score=112.19 Aligned_cols=112 Identities=13% Similarity=-0.022 Sum_probs=89.6
Q ss_pred eecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEc
Q 030935 50 FVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTW 128 (169)
Q Consensus 50 ~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~ 128 (169)
..||....+.+.+. ..++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.+++++..++.. +.+...++
T Consensus 5 ~~~~~~~~~~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~v~~~~~d~ 78 (239)
T 1xxl_A 5 HHHHSLGLMIKTAE----CRAEHRVLDIGAGAGHTALAFSPYVQECIGVDAT--KEMVEVASSFAQEKGVENVRFQQGTA 78 (239)
T ss_dssp -CHHHHHHHHHHHT----CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESC--HHHHHHHHHHHHHHTCCSEEEEECBT
T ss_pred ccCCCcchHHHHhC----cCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECC--HHHHHHHHHHHHHcCCCCeEEEeccc
Confidence 35777766666663 3467899999999999999999998999999999 56999999999888764 34333333
Q ss_pred CCCCcCCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 129 GFLDASIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 129 ~~~~~~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.. .+..+.+||+|+++.++++..+...+++.+.+.|+|+
T Consensus 79 ~~--~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg 117 (239)
T 1xxl_A 79 ES--LPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD 117 (239)
T ss_dssp TB--CCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE
T ss_pred cc--CCCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCC
Confidence 22 1333468999999999999999999999999999985
No 11
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.61 E-value=7.8e-15 Score=114.16 Aligned_cols=112 Identities=15% Similarity=0.023 Sum_probs=87.0
Q ss_pred chHHHHHHHHHhccC-CCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCc--ceEEEEEc
Q 030935 53 PCSVILAEYVWQQRY-RFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLN--CRVMGLTW 128 (169)
Q Consensus 53 ~~~~~La~~l~~~~~-~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~--~~~~~l~~ 128 (169)
|........+..... ..++.+|||+|||+|..++.+++.+. +|+++|++ +.+++.++++++.+++. +++...++
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~~~~~d~ 105 (267)
T 3kkz_A 28 PGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFL--SGFIDIFNRNARQSGLQNRVTGIVGSM 105 (267)
T ss_dssp SCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred CCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCC--HHHHHHHHHHHHHcCCCcCcEEEEcCh
Confidence 444444555554433 45678999999999999999999865 99999999 57999999999988875 34333333
Q ss_pred CCCCcCCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 129 GFLDASIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 129 ~~~~~~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.+. +..+.+||+|++..++++. +.+.+++.+.+.|+|+
T Consensus 106 ~~~--~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~Lkpg 143 (267)
T 3kkz_A 106 DDL--PFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKG 143 (267)
T ss_dssp TSC--CCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEE
T ss_pred hhC--CCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCC
Confidence 221 2335689999999999999 8999999999999985
No 12
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.61 E-value=1e-14 Score=120.02 Aligned_cols=115 Identities=22% Similarity=0.267 Sum_probs=92.2
Q ss_pred eecchHHHHHHHHHhcc--CCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEE
Q 030935 50 FVWPCSVILAEYVWQQR--YRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLT 127 (169)
Q Consensus 50 ~~W~~~~~La~~l~~~~--~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~ 127 (169)
...+.+..+.+.+.... ...++.+|||+|||+|.+++.+++.+++|+++|++ +.+++.+++|+..+++.+++.
T Consensus 211 ~~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis--~~al~~A~~n~~~~~~~v~~~--- 285 (381)
T 3dmg_A 211 KVDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDD--LASVLSLQKGLEANALKAQAL--- 285 (381)
T ss_dssp SCCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESB--HHHHHHHHHHHHHTTCCCEEE---
T ss_pred CCCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHHcCCCeEEE---
Confidence 35577888888886643 23467899999999999999999999999999999 579999999999998876544
Q ss_pred cCCCCcCCC-CCCCcEEEEcCcCCC-----CCChHHHHHHHHHhccCC
Q 030935 128 WGFLDASIF-DLNPNIILGADVFYD-----ASGKICAFEILICSLFPI 169 (169)
Q Consensus 128 ~~~~~~~~~-~~~fDlIi~sd~iy~-----~~~~~~l~~~l~~~L~p~ 169 (169)
+++...... ..+||+|+++.++++ ......+++.+.+.|+|+
T Consensus 286 ~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpG 333 (381)
T 3dmg_A 286 HSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPG 333 (381)
T ss_dssp ECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEE
T ss_pred EcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcC
Confidence 444433333 369999999888886 455678999999999985
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.61 E-value=1.9e-15 Score=116.69 Aligned_cols=115 Identities=11% Similarity=0.035 Sum_probs=91.7
Q ss_pred eecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEc
Q 030935 50 FVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTW 128 (169)
Q Consensus 50 ~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~ 128 (169)
..++.+..+++.+.+.....++.+|||+|||+|..+..+++. +++|+++|++ +.+++.++++.... ..+.+...+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s--~~~~~~a~~~~~~~-~~~~~~~~d~ 111 (266)
T 3ujc_A 35 YISSGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDIC--SNIVNMANERVSGN-NKIIFEANDI 111 (266)
T ss_dssp CCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESC--HHHHHHHHHTCCSC-TTEEEEECCT
T ss_pred ccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHhhcC-CCeEEEECcc
Confidence 456777777888887766667889999999999999999986 8899999999 56999998877654 3333333333
Q ss_pred CCCCcCCCCCCCcEEEEcCcCCCC--CChHHHHHHHHHhccCC
Q 030935 129 GFLDASIFDLNPNIILGADVFYDA--SGKICAFEILICSLFPI 169 (169)
Q Consensus 129 ~~~~~~~~~~~fDlIi~sd~iy~~--~~~~~l~~~l~~~L~p~ 169 (169)
.+. +..+.+||+|++..++++. .+...+++.+.+.|+|+
T Consensus 112 ~~~--~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg 152 (266)
T 3ujc_A 112 LTK--EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT 152 (266)
T ss_dssp TTC--CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred ccC--CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC
Confidence 221 3345699999999999999 89999999999999985
No 14
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.61 E-value=7.4e-15 Score=113.78 Aligned_cols=96 Identities=15% Similarity=0.000 Sum_probs=80.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcCCCCc-CCCCCCCcEEEEc
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWGFLDA-SIFDLNPNIILGA 146 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~~~~~-~~~~~~fDlIi~s 146 (169)
.++.+|||+|||+|.++..+++.+.+|+++|++ +.+++.+++++..++.. +.+. .++... +..+.+||+|+++
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~~v~~~---~~d~~~l~~~~~~fD~V~~~ 110 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLT--EDILKVARAFIEGNGHQQVEYV---QGDAEQMPFTDERFHIVTCR 110 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSSEEEEEESC--HHHHHHHHHHHHHTTCCSEEEE---ECCC-CCCSCTTCEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCC--HHHHHHHHHHHHhcCCCceEEE---EecHHhCCCCCCCEEEEEEh
Confidence 467899999999999999999998899999999 57999999999887754 3333 333322 3344699999999
Q ss_pred CcCCCCCChHHHHHHHHHhccCC
Q 030935 147 DVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.++++..+.+.+++.+.+.|+|+
T Consensus 111 ~~l~~~~d~~~~l~~~~r~Lkpg 133 (260)
T 1vl5_A 111 IAAHHFPNPASFVSEAYRVLKKG 133 (260)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEE
T ss_pred hhhHhcCCHHHHHHHHHHHcCCC
Confidence 99999999999999999999985
No 15
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.61 E-value=5.7e-15 Score=111.59 Aligned_cols=114 Identities=16% Similarity=0.018 Sum_probs=85.5
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcc----eEEEE
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNC----RVMGL 126 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~----~~~~l 126 (169)
+......+++.+.....++.+|||+|||+|..+..+++.+ .+|+++|++ +.+++.+++++..+++.. ++. +
T Consensus 12 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~~~~~v~-~ 88 (219)
T 3jwg_A 12 NLNQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVS--YSVLERAKDRLKIDRLPEMQRKRIS-L 88 (219)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESC--HHHHHHHHHHHTGGGSCHHHHTTEE-E
T ss_pred cchHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECC--HHHHHHHHHHHHhhccccccCcceE-E
Confidence 4444555555554434467899999999999999999876 599999999 579999999988776531 222 3
Q ss_pred EcCCCCc-CCCCCCCcEEEEcCcCCCCCCh--HHHHHHHHHhccCC
Q 030935 127 TWGFLDA-SIFDLNPNIILGADVFYDASGK--ICAFEILICSLFPI 169 (169)
Q Consensus 127 ~~~~~~~-~~~~~~fDlIi~sd~iy~~~~~--~~l~~~l~~~L~p~ 169 (169)
..++... .....+||+|++++++++.... ..+++.+.+.|+|+
T Consensus 89 ~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 134 (219)
T 3jwg_A 89 FQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQ 134 (219)
T ss_dssp EECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCS
T ss_pred EeCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCC
Confidence 3333322 2234589999999999999744 79999999999996
No 16
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.60 E-value=6.9e-15 Score=111.07 Aligned_cols=111 Identities=16% Similarity=-0.005 Sum_probs=83.3
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcc----eEEEEEcC
Q 030935 56 VILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNC----RVMGLTWG 129 (169)
Q Consensus 56 ~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~----~~~~l~~~ 129 (169)
....+++.......++.+|||+|||+|.++..+++.+ .+|+++|++ +.+++.+++++..+++.. ++. +..+
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~~~~~v~-~~~~ 91 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVS--YRSLEIAQERLDRLRLPRNQWERLQ-LIQG 91 (217)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESC--HHHHHHHHHHHTTCCCCHHHHTTEE-EEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECC--HHHHHHHHHHHHHhcCCcccCcceE-EEeC
Confidence 3344455444334467899999999999999999876 499999999 579999999998776642 222 3333
Q ss_pred CCCc-CCCCCCCcEEEEcCcCCCCCCh--HHHHHHHHHhccCC
Q 030935 130 FLDA-SIFDLNPNIILGADVFYDASGK--ICAFEILICSLFPI 169 (169)
Q Consensus 130 ~~~~-~~~~~~fDlIi~sd~iy~~~~~--~~l~~~l~~~L~p~ 169 (169)
+... .....+||+|+++.++++.... ..+++.+.+.|+|+
T Consensus 92 d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 134 (217)
T 3jwh_A 92 ALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPK 134 (217)
T ss_dssp CTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCS
T ss_pred CcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCC
Confidence 4322 2223589999999999988744 89999999999996
No 17
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.60 E-value=7.1e-15 Score=108.89 Aligned_cols=97 Identities=20% Similarity=0.186 Sum_probs=79.6
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCC-cceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKL-NCRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~-~~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
..++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.+++++..++. .+++...+.... + .+.+||+|+++
T Consensus 30 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~~d~~~~--~-~~~~~D~v~~~ 104 (199)
T 2xvm_A 30 VVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKN--AMSIANVERIKSIENLDNLHTRVVDLNNL--T-FDRQYDFILST 104 (199)
T ss_dssp TSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHTCTTEEEEECCGGGC--C-CCCCEEEEEEE
T ss_pred ccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECC--HHHHHHHHHHHHhCCCCCcEEEEcchhhC--C-CCCCceEEEEc
Confidence 3467799999999999999999999999999999 5699999999988876 344433333321 2 25689999999
Q ss_pred CcCCCCC--ChHHHHHHHHHhccCC
Q 030935 147 DVFYDAS--GKICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~--~~~~l~~~l~~~L~p~ 169 (169)
.++++.. ....+++.+.+.|+|+
T Consensus 105 ~~l~~~~~~~~~~~l~~~~~~L~~g 129 (199)
T 2xvm_A 105 VVLMFLEAKTIPGLIANMQRCTKPG 129 (199)
T ss_dssp SCGGGSCGGGHHHHHHHHHHTEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999876 7899999999999985
No 18
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.60 E-value=2.3e-15 Score=113.40 Aligned_cols=113 Identities=12% Similarity=-0.078 Sum_probs=86.9
Q ss_pred ecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCC
Q 030935 51 VWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGF 130 (169)
Q Consensus 51 ~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~ 130 (169)
.|-....+..++.......++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.+++++..++ .+.+.. ++
T Consensus 32 ~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~~~~~-~~~~~~---~d 105 (216)
T 3ofk_A 32 NPFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVM--PRAIGRACQRTKRWS-HISWAA---TD 105 (216)
T ss_dssp CHHHHHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESC--HHHHHHHHHHTTTCS-SEEEEE---CC
T ss_pred CHhHHHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECC--HHHHHHHHHhcccCC-CeEEEE---cc
Confidence 344445666666655555567899999999999999999998899999999 569999999887543 344333 33
Q ss_pred CCcCCCCCCCcEEEEcCcCCCCCCh---HHHHHHHHHhccCC
Q 030935 131 LDASIFDLNPNIILGADVFYDASGK---ICAFEILICSLFPI 169 (169)
Q Consensus 131 ~~~~~~~~~fDlIi~sd~iy~~~~~---~~l~~~l~~~L~p~ 169 (169)
......+.+||+|+++.++++..+. ..+++.+.+.|+|+
T Consensus 106 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pg 147 (216)
T 3ofk_A 106 ILQFSTAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPG 147 (216)
T ss_dssp TTTCCCSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEE
T ss_pred hhhCCCCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCC
Confidence 3332245699999999999998887 46699999999985
No 19
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.60 E-value=1.6e-14 Score=115.08 Aligned_cols=106 Identities=12% Similarity=-0.072 Sum_probs=84.5
Q ss_pred HHHHhccC-CCCCCeEEEECCCCCHHHHHHHHh-CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-CCC
Q 030935 60 EYVWQQRY-RFSGANVVELGAGTSLPGLVAAKV-GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-SIF 136 (169)
Q Consensus 60 ~~l~~~~~-~~~~~~vLElGcGtGl~~l~~a~~-ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~~~ 136 (169)
+++..... ..++.+|||+|||+|.+++.+++. +++|+++|++ +.+++.+++|++.+++..++. +..++... +..
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~ 182 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLS--AAQADFGNRRARELRIDDHVR-SRVCNMLDTPFD 182 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESC--HHHHHHHHHHHHHTTCTTTEE-EEECCTTSCCCC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHHHHcCCCCceE-EEECChhcCCCC
Confidence 34544444 556789999999999999999987 8899999999 579999999999988763332 33334332 234
Q ss_pred CCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 137 DLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+.+||+|++.+++++. +...+++.+.+.|+|+
T Consensus 183 ~~~fD~V~~~~~l~~~-~~~~~l~~~~~~Lkpg 214 (312)
T 3vc1_A 183 KGAVTASWNNESTMYV-DLHDLFSEHSRFLKVG 214 (312)
T ss_dssp TTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEE
T ss_pred CCCEeEEEECCchhhC-CHHHHHHHHHHHcCCC
Confidence 4699999999999998 4999999999999985
No 20
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.60 E-value=2.5e-14 Score=113.31 Aligned_cols=107 Identities=11% Similarity=-0.048 Sum_probs=85.2
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF 136 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~ 136 (169)
..+.+.......++.+|||+|||+|.+++.+++. |++|+++|++ +.+++.+++++..+++..++. +..++....
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~-- 134 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLS--ENQYAHDKAMFDEVDSPRRKE-VRIQGWEEF-- 134 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECC--HHHHHHHHHHHHHSCCSSCEE-EEECCGGGC--
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECC--HHHHHHHHHHHHhcCCCCceE-EEECCHHHc--
Confidence 4445555555567889999999999999999987 8899999999 579999999999888763332 233333222
Q ss_pred CCCCcEEEEcCcCCCCCC---------hHHHHHHHHHhccCC
Q 030935 137 DLNPNIILGADVFYDASG---------KICAFEILICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~~~~---------~~~l~~~l~~~L~p~ 169 (169)
+.+||+|++..++++..+ .+.+++.+.+.|+|+
T Consensus 135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg 176 (302)
T 3hem_A 135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD 176 (302)
T ss_dssp CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT
T ss_pred CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC
Confidence 679999999999998844 489999999999996
No 21
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.59 E-value=1.4e-14 Score=113.80 Aligned_cols=97 Identities=16% Similarity=0.186 Sum_probs=79.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC--CCCCCCcEEEEcC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS--IFDLNPNIILGAD 147 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~--~~~~~fDlIi~sd 147 (169)
++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.+++++..+++..++. +..++.... ..+.+||+|++..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~~fD~v~~~~ 144 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLS--AQMIDRAKQAAEAKGVSDNMQ-FIHCAAQDVASHLETPVDLILFHA 144 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHC-CCGGGEE-EEESCGGGTGGGCSSCEEEEEEES
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCCcceE-EEEcCHHHhhhhcCCCceEEEECc
Confidence 46799999999999999999999999999999 579999999998887753332 223333222 2456999999999
Q ss_pred cCCCCCChHHHHHHHHHhccCC
Q 030935 148 VFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 148 ~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
++++..+...+++.+.+.|+|+
T Consensus 145 ~l~~~~~~~~~l~~~~~~Lkpg 166 (285)
T 4htf_A 145 VLEWVADPRSVLQTLWSVLRPG 166 (285)
T ss_dssp CGGGCSCHHHHHHHHHHTEEEE
T ss_pred hhhcccCHHHHHHHHHHHcCCC
Confidence 9999999999999999999985
No 22
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.58 E-value=1.9e-14 Score=109.46 Aligned_cols=98 Identities=27% Similarity=0.348 Sum_probs=76.0
Q ss_pred CCCCeEEEECCC-CCHHHHHHHHh-CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 69 FSGANVVELGAG-TSLPGLVAAKV-GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 69 ~~~~~vLElGcG-tGl~~l~~a~~-ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
.++.+|||+||| +|.+++.+++. +.+|+++|++ +.+++.+++|++.++.++++...++... ....+.+||+|+++
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~v~~~~~d~~~~-~~~~~~~fD~I~~n 130 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVD--EEFFEYARRNIERNNSNVRLVKSNGGII-KGVVEGTFDVIFSA 130 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECC--HHHHHHHHHHHHHTTCCCEEEECSSCSS-TTTCCSCEEEEEEC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECC--HHHHHHHHHHHHHhCCCcEEEeCCchhh-hhcccCceeEEEEC
Confidence 367899999999 99999999998 7899999999 5799999999999988665554443222 23334699999987
Q ss_pred CcCCCCCC-------------------hHHHHHHHHHhccCC
Q 030935 147 DVFYDASG-------------------KICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~~-------------------~~~l~~~l~~~L~p~ 169 (169)
.+++.... +..+++.+.+.|+|+
T Consensus 131 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 172 (230)
T 3evz_A 131 PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG 172 (230)
T ss_dssp CCCC---------------CCSSSCHHHHHHHHHHGGGEEEE
T ss_pred CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC
Confidence 66554332 478899999999985
No 23
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.58 E-value=4.3e-14 Score=110.95 Aligned_cols=111 Identities=12% Similarity=0.017 Sum_probs=87.3
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHH-HhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCC
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAA-KVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLD 132 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a-~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~ 132 (169)
+...+.+.+.......++.+|||+|||+|..+..++ +.|.+|+++|++ +.+++.+++++...++...+. +..++..
T Consensus 48 a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s--~~~~~~a~~~~~~~~~~~~~~-~~~~d~~ 124 (287)
T 1kpg_A 48 AQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLS--KNQANHVQQLVANSENLRSKR-VLLAGWE 124 (287)
T ss_dssp HHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESC--HHHHHHHHHHHHTCCCCSCEE-EEESCGG
T ss_pred HHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHhcCCCCCeE-EEECChh
Confidence 344456666666666678899999999999999888 568899999999 569999999998776643332 2233332
Q ss_pred cCCCCCCCcEEEEcCcCCCC--CChHHHHHHHHHhccCC
Q 030935 133 ASIFDLNPNIILGADVFYDA--SGKICAFEILICSLFPI 169 (169)
Q Consensus 133 ~~~~~~~fDlIi~sd~iy~~--~~~~~l~~~l~~~L~p~ 169 (169)
. . +.+||+|++..++++. .+...+++.+.+.|+|+
T Consensus 125 ~-~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 161 (287)
T 1kpg_A 125 Q-F-DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD 161 (287)
T ss_dssp G-C-CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT
T ss_pred h-C-CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC
Confidence 2 2 2689999999999988 78899999999999996
No 24
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.58 E-value=1.5e-14 Score=109.34 Aligned_cols=109 Identities=16% Similarity=0.104 Sum_probs=85.2
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS 134 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~ 134 (169)
...+.+.+.+... ++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++.+.++..+++...+..+. +
T Consensus 25 ~~~~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~d~~~~--~ 98 (227)
T 1ve3_A 25 IETLEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDYGFEVVGVDIS--EDMIRKAREYAKSRESNVEFIVGDARKL--S 98 (227)
T ss_dssp HHHHHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCCEEEECCTTSC--C
T ss_pred HHHHHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHhcCCCceEEECchhcC--C
Confidence 4455556655543 37799999999999999999998899999999 5799999999988775555444433321 2
Q ss_pred CCCCCCcEEEEcCc--CCCCCChHHHHHHHHHhccCC
Q 030935 135 IFDLNPNIILGADV--FYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 135 ~~~~~fDlIi~sd~--iy~~~~~~~l~~~l~~~L~p~ 169 (169)
..+.+||+|+++++ +++..+...+++.+.+.|+|+
T Consensus 99 ~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~g 135 (227)
T 1ve3_A 99 FEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPS 135 (227)
T ss_dssp SCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEE
T ss_pred CCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCC
Confidence 33458999999999 666677889999999999985
No 25
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.57 E-value=7.7e-15 Score=115.26 Aligned_cols=95 Identities=19% Similarity=0.130 Sum_probs=79.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVF 149 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~i 149 (169)
++.+|||+|||+|..++.+++.|.+|+++|++ +.+++.+++++..++..+++... +......+.+||+|+++.++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~fD~i~~~~~~ 194 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHN--ENSIAFLNETKEKENLNISTALY---DINAANIQENYDFIVSTVVF 194 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEEEC---CGGGCCCCSCEEEEEECSSG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCCeEEEEECC--HHHHHHHHHHHHHcCCceEEEEe---ccccccccCCccEEEEccch
Confidence 67899999999999999999999999999999 56999999999998875554433 33332236699999999999
Q ss_pred CCC--CChHHHHHHHHHhccCC
Q 030935 150 YDA--SGKICAFEILICSLFPI 169 (169)
Q Consensus 150 y~~--~~~~~l~~~l~~~L~p~ 169 (169)
++. .....+++.+.+.|+|+
T Consensus 195 ~~~~~~~~~~~l~~~~~~Lkpg 216 (286)
T 3m70_A 195 MFLNRERVPSIIKNMKEHTNVG 216 (286)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCC
Confidence 976 45679999999999985
No 26
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.57 E-value=2.6e-14 Score=111.50 Aligned_cols=110 Identities=22% Similarity=0.177 Sum_probs=88.3
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcCCC
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWGFL 131 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~~~ 131 (169)
...+.+++.......++.+|||+|||+|..+..+++. +.+|+++|++ +.+++.+++++..++.. +.+. .++.
T Consensus 22 ~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~---~~d~ 96 (276)
T 3mgg_A 22 AETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDIS--PESLEKARENTEKNGIKNVKFL---QANI 96 (276)
T ss_dssp -CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESC--HHHHHHHHHHHHHTTCCSEEEE---ECCG
T ss_pred HHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEEE---Eccc
Confidence 4456667766655567889999999999999999988 5699999999 56999999999888764 3333 2333
Q ss_pred Cc-CCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 132 DA-SIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 132 ~~-~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.. +..+.+||+|+++.++++..+.+.+++.+.+.|+|+
T Consensus 97 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg 135 (276)
T 3mgg_A 97 FSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPG 135 (276)
T ss_dssp GGCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE
T ss_pred ccCCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCC
Confidence 22 334569999999999999999999999999999985
No 27
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.57 E-value=2.1e-15 Score=113.37 Aligned_cols=96 Identities=13% Similarity=0.009 Sum_probs=73.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcCCCCc---CCCCCC-CcEE
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWGFLDA---SIFDLN-PNII 143 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~~~~~---~~~~~~-fDlI 143 (169)
++.+|||+|||+|.+++.+++.++ +|+++|++ +.+++.+++|++.+++. .++. +..++... ...+.+ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELD--KTVANQLKKNLQTLKCSSEQAE-VINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSC--HHHHHHHHHHHHHTTCCTTTEE-EECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECC--HHHHHHHHHHHHHhCCCccceE-EEECCHHHHHHhhccCCCCCEE
Confidence 578999999999999998887775 89999999 57999999999998872 1222 33344322 112457 9999
Q ss_pred EEcCcCCCCCChHHHHHHH--HHhccCC
Q 030935 144 LGADVFYDASGKICAFEIL--ICSLFPI 169 (169)
Q Consensus 144 i~sd~iy~~~~~~~l~~~l--~~~L~p~ 169 (169)
++..+ |.....+.+++.+ .+.|+|+
T Consensus 130 ~~~~~-~~~~~~~~~l~~~~~~~~Lkpg 156 (201)
T 2ift_A 130 FLDPP-FHFNLAEQAISLLCENNWLKPN 156 (201)
T ss_dssp EECCC-SSSCHHHHHHHHHHHTTCEEEE
T ss_pred EECCC-CCCccHHHHHHHHHhcCccCCC
Confidence 98766 6677888899988 4568875
No 28
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.57 E-value=1.3e-14 Score=109.38 Aligned_cols=98 Identities=18% Similarity=0.118 Sum_probs=80.3
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhC---CeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcCCCCcCCCCCCCcEE
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKVG---SNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWGFLDASIFDLNPNII 143 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~g---a~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~~~~~~~~~~~fDlI 143 (169)
..++.+|||+|||+|..+..+++.+ .+|+++|++ +.+++.+++++..+++. +.+...+..+. ...+.+||+|
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~v 110 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQ--EEMVNYAWEKVNKLGLKNVEVLKSEENKI--PLPDNTVDFI 110 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESC--HHHHHHHHHHHHHHTCTTEEEEECBTTBC--SSCSSCEEEE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECC--HHHHHHHHHHHHHcCCCcEEEEecccccC--CCCCCCeeEE
Confidence 4467899999999999999999876 599999999 56999999999888765 44333333221 2344589999
Q ss_pred EEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 144 LGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 144 i~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+++.++++..+...+++.+.+.|+|+
T Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~Lkpg 136 (219)
T 3dh0_A 111 FMAFTFHELSEPLKFLEELKRVAKPF 136 (219)
T ss_dssp EEESCGGGCSSHHHHHHHHHHHEEEE
T ss_pred EeehhhhhcCCHHHHHHHHHHHhCCC
Confidence 99999999999999999999999985
No 29
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.57 E-value=2.1e-14 Score=105.48 Aligned_cols=105 Identities=17% Similarity=0.108 Sum_probs=80.9
Q ss_pred HHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCc---ceEEEEEcCCCCcCCC
Q 030935 60 EYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLN---CRVMGLTWGFLDASIF 136 (169)
Q Consensus 60 ~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~---~~~~~l~~~~~~~~~~ 136 (169)
+.+.+.....++.+|||+|||+|..++.+++.+.+|+++|++ +.+++.+++++..++.. +++. .++......
T Consensus 42 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~--~~~~~~a~~~~~~~~~~~~~~~~~---~~d~~~~~~ 116 (194)
T 1dus_A 42 KILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADIN--RRAIKLAKENIKLNNLDNYDIRVV---HSDLYENVK 116 (194)
T ss_dssp HHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESC--HHHHHHHHHHHHHTTCTTSCEEEE---ECSTTTTCT
T ss_pred HHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECC--HHHHHHHHHHHHHcCCCccceEEE---ECchhcccc
Confidence 334333334477899999999999999999988899999999 57999999999988775 3433 334333334
Q ss_pred CCCCcEEEEcCcCCC-CCChHHHHHHHHHhccCC
Q 030935 137 DLNPNIILGADVFYD-ASGKICAFEILICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~-~~~~~~l~~~l~~~L~p~ 169 (169)
+.+||+|+++.++++ ......+++.+.+.|+|+
T Consensus 117 ~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~g 150 (194)
T 1dus_A 117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN 150 (194)
T ss_dssp TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE
T ss_pred cCCceEEEECCCcccchhHHHHHHHHHHHHcCCC
Confidence 568999999877665 356788999999999985
No 30
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.57 E-value=3.8e-14 Score=103.29 Aligned_cols=105 Identities=10% Similarity=-0.022 Sum_probs=79.7
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS 134 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~ 134 (169)
.+...+.......++.+|||+|||+|..++.+++. +.+|+++|++ +.+++.+++|+..++...++ .+. ++....
T Consensus 12 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~-~~~-~d~~~~ 87 (178)
T 3hm2_A 12 HVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEIS--EERRERILSNAINLGVSDRI-AVQ-QGAPRA 87 (178)
T ss_dssp HHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSC--HHHHHHHHHHHHTTTCTTSE-EEE-CCTTGG
T ss_pred HHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCC--HHHHHHHHHHHHHhCCCCCE-EEe-cchHhh
Confidence 33444444444557789999999999999999887 5699999999 56999999999988876334 233 333233
Q ss_pred CCC--CCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 135 IFD--LNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 135 ~~~--~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
... .+||+|+++.++++ ..+++.+.+.|+|+
T Consensus 88 ~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~g 120 (178)
T 3hm2_A 88 FDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVG 120 (178)
T ss_dssp GGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTT
T ss_pred hhccCCCCCEEEECCcccH----HHHHHHHHHhcCCC
Confidence 333 68999999999887 78999999999986
No 31
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.56 E-value=2.3e-14 Score=110.41 Aligned_cols=102 Identities=17% Similarity=0.056 Sum_probs=81.1
Q ss_pred HHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCC
Q 030935 62 VWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNP 140 (169)
Q Consensus 62 l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~f 140 (169)
+.......++.+|||+|||+|..+..+++.+. +|+++|++ +.+++.++++.. ...+.+...+..+. +..+.+|
T Consensus 36 l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s--~~~~~~a~~~~~--~~~~~~~~~d~~~~--~~~~~~f 109 (253)
T 3g5l_A 36 LKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLS--ERMLTEAKRKTT--SPVVCYEQKAIEDI--AIEPDAY 109 (253)
T ss_dssp HHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHCC--CTTEEEEECCGGGC--CCCTTCE
T ss_pred HHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECC--HHHHHHHHHhhc--cCCeEEEEcchhhC--CCCCCCe
Confidence 44444555788999999999999999999988 99999999 569999988776 22333333333221 2335699
Q ss_pred cEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 141 NIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 141 DlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
|+|+++.++++..+...+++.+.+.|+|+
T Consensus 110 D~v~~~~~l~~~~~~~~~l~~~~~~Lkpg 138 (253)
T 3g5l_A 110 NVVLSSLALHYIASFDDICKKVYINLKSS 138 (253)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEE
T ss_pred EEEEEchhhhhhhhHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999985
No 32
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.56 E-value=1e-14 Score=114.43 Aligned_cols=102 Identities=15% Similarity=0.035 Sum_probs=79.0
Q ss_pred HHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc---CCC
Q 030935 60 EYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA---SIF 136 (169)
Q Consensus 60 ~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~---~~~ 136 (169)
+.+.......++.+|||||||+|.+++.+++.|++|+++|++ +.|++.+++|+..+. ...+|.+... ...
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S--~~ml~~Ar~~~~~~~-----v~~~~~~~~~~~~~~~ 107 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFS--QRMCDDLAEALADRC-----VTIDLLDITAEIPKEL 107 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHTSSSC-----CEEEECCTTSCCCGGG
T ss_pred HHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECC--HHHHHHHHHHHHhcc-----ceeeeeeccccccccc
Confidence 445555555678899999999999999999999999999999 579999999887552 2244544322 112
Q ss_pred CCCCcEEEEcCcCCCC--CChHHHHHHHHHhccCC
Q 030935 137 DLNPNIILGADVFYDA--SGKICAFEILICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~~--~~~~~l~~~l~~~L~p~ 169 (169)
+.+||+|+++.++++. .....+++.+.++| ||
T Consensus 108 ~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG 141 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GS 141 (261)
T ss_dssp TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT
T ss_pred CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC
Confidence 4589999999998754 45677899999998 86
No 33
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.56 E-value=3.1e-14 Score=111.53 Aligned_cols=97 Identities=16% Similarity=0.147 Sum_probs=77.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh----CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEE
Q 030935 69 FSGANVVELGAGTSLPGLVAAKV----GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIIL 144 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~----ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi 144 (169)
.+|.+|||||||+|..++.+++. |++|+++|++ +.|++.|+++++..+...++. +..++... ....+||+|+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s--~~ml~~A~~~~~~~~~~~~v~-~~~~D~~~-~~~~~~d~v~ 144 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNS--PAMIERCRRHIDAYKAPTPVD-VIEGDIRD-IAIENASMVV 144 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESC--HHHHHHHHHHHHTSCCSSCEE-EEESCTTT-CCCCSEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECC--HHHHHHHHHHHHhhccCceEE-Eeeccccc-ccccccccce
Confidence 36789999999999999999875 4589999999 679999999998777654433 34455433 2334799999
Q ss_pred EcCcCCCCCC--hHHHHHHHHHhccCC
Q 030935 145 GADVFYDASG--KICAFEILICSLFPI 169 (169)
Q Consensus 145 ~sd~iy~~~~--~~~l~~~l~~~L~p~ 169 (169)
++.++++... ...+++.+.+.|+||
T Consensus 145 ~~~~l~~~~~~~~~~~l~~i~~~LkpG 171 (261)
T 4gek_A 145 LNFTLQFLEPSERQALLDKIYQGLNPG 171 (261)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred eeeeeeecCchhHhHHHHHHHHHcCCC
Confidence 9999988754 457899999999996
No 34
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.56 E-value=4.5e-14 Score=114.39 Aligned_cols=108 Identities=20% Similarity=0.233 Sum_probs=83.3
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-CC
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-SI 135 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~~ 135 (169)
..+.+.+.....++++|||+|||+|.+++.+++.|+ +|+++|+++ +++.++++++.+++..++. +..++... ..
T Consensus 52 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~---~~~~a~~~~~~~~~~~~i~-~~~~d~~~~~~ 127 (340)
T 2fyt_A 52 YRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE---ILYQAMDIIRLNKLEDTIT-LIKGKIEEVHL 127 (340)
T ss_dssp HHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST---HHHHHHHHHHHTTCTTTEE-EEESCTTTSCC
T ss_pred HHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH---HHHHHHHHHHHcCCCCcEE-EEEeeHHHhcC
Confidence 345566665567889999999999999999999987 899999993 8999999999988743333 23344332 23
Q ss_pred CCCCCcEEEEcCc---CCCCCChHHHHHHHHHhccCC
Q 030935 136 FDLNPNIILGADV---FYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 136 ~~~~fDlIi~sd~---iy~~~~~~~l~~~l~~~L~p~ 169 (169)
...+||+|++..+ +.+...++.+++.+.+.|+|+
T Consensus 128 ~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~Lkpg 164 (340)
T 2fyt_A 128 PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKG 164 (340)
T ss_dssp SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEE
T ss_pred CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCC
Confidence 3468999999874 456677888999999999985
No 35
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.56 E-value=2.1e-14 Score=109.69 Aligned_cols=109 Identities=11% Similarity=-0.084 Sum_probs=83.4
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCC
Q 030935 56 VILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASI 135 (169)
Q Consensus 56 ~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~ 135 (169)
..+.+++... ..++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.+++++...+...++. +..++.....
T Consensus 54 ~~l~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~ 128 (235)
T 3lcc_A 54 PLIVHLVDTS--SLPLGRALVPGCGGGHDVVAMASPERFVVGLDIS--ESALAKANETYGSSPKAEYFS-FVKEDVFTWR 128 (235)
T ss_dssp HHHHHHHHTT--CSCCEEEEEETCTTCHHHHHHCBTTEEEEEECSC--HHHHHHHHHHHTTSGGGGGEE-EECCCTTTCC
T ss_pred HHHHHHHHhc--CCCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECC--HHHHHHHHHHhhccCCCcceE-EEECchhcCC
Confidence 3455555433 2244599999999999999999988899999999 569999999987644322222 3344444333
Q ss_pred CCCCCcEEEEcCcCCCCC--ChHHHHHHHHHhccCC
Q 030935 136 FDLNPNIILGADVFYDAS--GKICAFEILICSLFPI 169 (169)
Q Consensus 136 ~~~~fDlIi~sd~iy~~~--~~~~l~~~l~~~L~p~ 169 (169)
...+||+|+++.++++.. ....+++.+.+.|+|+
T Consensus 129 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 164 (235)
T 3lcc_A 129 PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPD 164 (235)
T ss_dssp CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEE
T ss_pred CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCC
Confidence 445899999999999887 8899999999999985
No 36
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.56 E-value=3.7e-14 Score=116.36 Aligned_cols=111 Identities=18% Similarity=0.221 Sum_probs=86.7
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA 133 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~ 133 (169)
.....+++.+.....++++|||||||+|.+++.+++.|+ +|+++|.+ . |++.++++++.+++..++. +..++...
T Consensus 48 ~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~--~~~~a~~~~~~~~~~~~v~-~~~~d~~~ 123 (376)
T 3r0q_C 48 MDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-K--MADHARALVKANNLDHIVE-VIEGSVED 123 (376)
T ss_dssp HHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-T--THHHHHHHHHHTTCTTTEE-EEESCGGG
T ss_pred HHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-H--HHHHHHHHHHHcCCCCeEE-EEECchhh
Confidence 344556676666677899999999999999999999988 99999999 5 9999999999998864332 33344333
Q ss_pred CCCCCCCcEEEEcCcCCCC---CChHHHHHHHHHhccCC
Q 030935 134 SIFDLNPNIILGADVFYDA---SGKICAFEILICSLFPI 169 (169)
Q Consensus 134 ~~~~~~fDlIi~sd~iy~~---~~~~~l~~~l~~~L~p~ 169 (169)
...+.+||+|++.-+.|.. ..++.+++.+.+.|+|+
T Consensus 124 ~~~~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~Lkpg 162 (376)
T 3r0q_C 124 ISLPEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPT 162 (376)
T ss_dssp CCCSSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEE
T ss_pred cCcCCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCC
Confidence 2233799999996555543 67888999999999985
No 37
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.56 E-value=1.8e-13 Score=102.39 Aligned_cols=102 Identities=11% Similarity=-0.015 Sum_probs=79.1
Q ss_pred HHHhccCCCCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC-C
Q 030935 61 YVWQQRYRFSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF-D 137 (169)
Q Consensus 61 ~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~-~ 137 (169)
.+.......++.+|||+|||+|.+++.+++.+ .+|+++|++ +.+++.+++|++.++.. ++. +..++...... .
T Consensus 31 ~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~-~v~-~~~~d~~~~~~~~ 106 (204)
T 3e05_A 31 VTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERN--PQYLGFIRDNLKKFVAR-NVT-LVEAFAPEGLDDL 106 (204)
T ss_dssp HHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECC--HHHHHHHHHHHHHHTCT-TEE-EEECCTTTTCTTS
T ss_pred HHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCC--HHHHHHHHHHHHHhCCC-cEE-EEeCChhhhhhcC
Confidence 34444445578899999999999999999987 699999999 57999999999988873 222 33344322222 2
Q ss_pred CCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 138 LNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 138 ~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.+||+|++..+.+ ..+.+++.+.+.|+|+
T Consensus 107 ~~~D~i~~~~~~~---~~~~~l~~~~~~Lkpg 135 (204)
T 3e05_A 107 PDPDRVFIGGSGG---MLEEIIDAVDRRLKSE 135 (204)
T ss_dssp CCCSEEEESCCTT---CHHHHHHHHHHHCCTT
T ss_pred CCCCEEEECCCCc---CHHHHHHHHHHhcCCC
Confidence 5899999988775 7889999999999996
No 38
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.56 E-value=2e-14 Score=118.11 Aligned_cols=108 Identities=19% Similarity=0.138 Sum_probs=82.4
Q ss_pred HHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcc--eEEEEEcCCCCcC
Q 030935 59 AEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNC--RVMGLTWGFLDAS 134 (169)
Q Consensus 59 a~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~--~~~~l~~~~~~~~ 134 (169)
++++.+......+.+|||+|||+|.+++.+++. +.+|+++|++ +.+++.+++|++.|++.. ++ .+.+++....
T Consensus 211 ~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s--~~al~~Ar~n~~~ngl~~~~~v-~~~~~D~~~~ 287 (375)
T 4dcm_A 211 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDES--PMAVASSRLNVETNMPEALDRC-EFMINNALSG 287 (375)
T ss_dssp HHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESC--HHHHHHHHHHHHHHCGGGGGGE-EEEECSTTTT
T ss_pred HHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECc--HHHHHHHHHHHHHcCCCcCceE-EEEechhhcc
Confidence 444555544556689999999999999999998 4699999999 579999999999998652 23 3556666555
Q ss_pred CCCCCCcEEEEcCcCCCC-----CChHHHHHHHHHhccCC
Q 030935 135 IFDLNPNIILGADVFYDA-----SGKICAFEILICSLFPI 169 (169)
Q Consensus 135 ~~~~~fDlIi~sd~iy~~-----~~~~~l~~~l~~~L~p~ 169 (169)
..+.+||+|+++.+++.. .....+++.+.+.|+|+
T Consensus 288 ~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkpg 327 (375)
T 4dcm_A 288 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKIN 327 (375)
T ss_dssp CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEE
T ss_pred CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCC
Confidence 555699999999888743 22346899999999985
No 39
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.55 E-value=8.3e-15 Score=107.65 Aligned_cols=115 Identities=14% Similarity=0.127 Sum_probs=84.3
Q ss_pred ecchHHHHHHHHHhcc-CCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEc
Q 030935 51 VWPCSVILAEYVWQQR-YRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTW 128 (169)
Q Consensus 51 ~W~~~~~La~~l~~~~-~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~ 128 (169)
.-|....+.+.+.... ...++.+|||+|||+|..++.+++.++ +|+++|++ +.+++.+++|+..+++..++. +..
T Consensus 24 ~rp~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~-~~~ 100 (187)
T 2fhp_A 24 TRPTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKN--FAALKVIKENIAITKEPEKFE-VRK 100 (187)
T ss_dssp SCCCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHHTCGGGEE-EEE
T ss_pred cCcCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECC--HHHHHHHHHHHHHhCCCcceE-EEE
Confidence 3455666666665543 235788999999999999998888775 89999999 579999999999988743322 223
Q ss_pred CCCCcCC-----CCCCCcEEEEcCcCCCCCChHHHHHHH--HHhccCC
Q 030935 129 GFLDASI-----FDLNPNIILGADVFYDASGKICAFEIL--ICSLFPI 169 (169)
Q Consensus 129 ~~~~~~~-----~~~~fDlIi~sd~iy~~~~~~~l~~~l--~~~L~p~ 169 (169)
++..... ...+||+|++..+ |.....+.+++.+ .+.|+|+
T Consensus 101 ~d~~~~~~~~~~~~~~fD~i~~~~~-~~~~~~~~~~~~l~~~~~L~~g 147 (187)
T 2fhp_A 101 MDANRALEQFYEEKLQFDLVLLDPP-YAKQEIVSQLEKMLERQLLTNE 147 (187)
T ss_dssp SCHHHHHHHHHHTTCCEEEEEECCC-GGGCCHHHHHHHHHHTTCEEEE
T ss_pred CcHHHHHHHHHhcCCCCCEEEECCC-CCchhHHHHHHHHHHhcccCCC
Confidence 3332211 1458999998666 6677788888888 7778874
No 40
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.55 E-value=8.2e-14 Score=111.03 Aligned_cols=109 Identities=11% Similarity=-0.057 Sum_probs=86.9
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC
Q 030935 56 VILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS 134 (169)
Q Consensus 56 ~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~ 134 (169)
....+.+.......++.+|||+|||+|.++..+++. |++|+++|++ +.+++.+++++..+++...+. +..++....
T Consensus 76 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~ 152 (318)
T 2fk8_A 76 YAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLS--KNQHARCEQVLASIDTNRSRQ-VLLQGWEDF 152 (318)
T ss_dssp HHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESC--HHHHHHHHHHHHTSCCSSCEE-EEESCGGGC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCCCceE-EEECChHHC
Confidence 445556666665667889999999999999999887 8899999999 579999999998877653332 233333221
Q ss_pred CCCCCCcEEEEcCcCCCC--CChHHHHHHHHHhccCC
Q 030935 135 IFDLNPNIILGADVFYDA--SGKICAFEILICSLFPI 169 (169)
Q Consensus 135 ~~~~~fDlIi~sd~iy~~--~~~~~l~~~l~~~L~p~ 169 (169)
+.+||+|++..++++. .+...+++.+.+.|+|+
T Consensus 153 --~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 187 (318)
T 2fk8_A 153 --AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD 187 (318)
T ss_dssp --CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT
T ss_pred --CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC
Confidence 3689999999999988 68899999999999996
No 41
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.55 E-value=4.3e-14 Score=111.25 Aligned_cols=98 Identities=16% Similarity=0.173 Sum_probs=81.0
Q ss_pred CCCCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEE
Q 030935 67 YRFSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNII 143 (169)
Q Consensus 67 ~~~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlI 143 (169)
...++.+|||+|||+|..++.+++. +++|+++|++ +.+++.+++++...+.++++.. ++......+.+||+|
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~v~~~~---~d~~~~~~~~~fD~v 93 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSG--ETLLAEARELFRLLPYDSEFLE---GDATEIELNDKYDIA 93 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESC--HHHHHHHHHHHHSSSSEEEEEE---SCTTTCCCSSCEEEE
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHhcCCceEEEE---cchhhcCcCCCeeEE
Confidence 4457789999999999999999986 5799999999 5799999999887766554443 333332234689999
Q ss_pred EEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 144 LGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 144 i~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
++..++++..+.+.+++.+.+.|+|+
T Consensus 94 ~~~~~l~~~~~~~~~l~~~~~~Lkpg 119 (284)
T 3gu3_A 94 ICHAFLLHMTTPETMLQKMIHSVKKG 119 (284)
T ss_dssp EEESCGGGCSSHHHHHHHHHHTEEEE
T ss_pred EECChhhcCCCHHHHHHHHHHHcCCC
Confidence 99999999999999999999999985
No 42
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.55 E-value=1e-14 Score=109.12 Aligned_cols=96 Identities=17% Similarity=0.112 Sum_probs=76.7
Q ss_pred CCCeEEEECCCCCHHH-HHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCc
Q 030935 70 SGANVVELGAGTSLPG-LVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADV 148 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~-l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~ 148 (169)
++.+|||+|||+|..+ ..+++.+.+|+++|++ +.+++.+++++..++..+.+...+..+. +..+.+||+|++..+
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEIS--DLQLKKAENFSRENNFKLNISKGDIRKL--PFKDESMSFVYSYGT 98 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECC--HHHHHHHHHHHHHHTCCCCEEECCTTSC--CSCTTCEEEEEECSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECC--HHHHHHHHHHHHhcCCceEEEECchhhC--CCCCCceeEEEEcCh
Confidence 5789999999999874 4556678899999999 5699999999987776655554443332 233468999999999
Q ss_pred CCCC--CChHHHHHHHHHhccCC
Q 030935 149 FYDA--SGKICAFEILICSLFPI 169 (169)
Q Consensus 149 iy~~--~~~~~l~~~l~~~L~p~ 169 (169)
+++. .+...+++.+.+.|+|+
T Consensus 99 l~~~~~~~~~~~l~~~~~~Lkpg 121 (209)
T 2p8j_A 99 IFHMRKNDVKEAIDEIKRVLKPG 121 (209)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEE
T ss_pred HHhCCHHHHHHHHHHHHHHcCCC
Confidence 9988 67889999999999985
No 43
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.55 E-value=1e-14 Score=110.48 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=79.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcc---eEEEEEcCCCCc-CCCCCCCcEEEE
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNC---RVMGLTWGFLDA-SIFDLNPNIILG 145 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~---~~~~l~~~~~~~-~~~~~~fDlIi~ 145 (169)
++.+|||+|||+|..+..+++.+++|+++|++ +.+++.+++++..++... ....+..++... +..+.+||+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDIN--SEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECC--HHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 67899999999999999999999999999999 569999999988776521 112233444332 233568999999
Q ss_pred cCcCCCCCChH---HHHHHHHHhccCC
Q 030935 146 ADVFYDASGKI---CAFEILICSLFPI 169 (169)
Q Consensus 146 sd~iy~~~~~~---~l~~~l~~~L~p~ 169 (169)
+.++++..+.+ .+++.+.+.|+|+
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pg 134 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPG 134 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEE
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCC
Confidence 99999998887 8999999999985
No 44
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.54 E-value=2e-13 Score=102.90 Aligned_cols=101 Identities=13% Similarity=0.098 Sum_probs=76.9
Q ss_pred HHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC-CCC
Q 030935 61 YVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF-DLN 139 (169)
Q Consensus 61 ~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~-~~~ 139 (169)
.+.......++.+|||+|||+|.+++.+++.+.+|+++|++ +++++.+++|++.+++..++. +..++...... ..+
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s--~~~~~~a~~~~~~~g~~~~v~-~~~~d~~~~~~~~~~ 122 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPR--ADRIENIQKNIDTYGLSPRMR-AVQGTAPAALADLPL 122 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCTTTEE-EEESCTTGGGTTSCC
T ss_pred HHHHhcCCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHHHHcCCCCCEE-EEeCchhhhcccCCC
Confidence 34444445578899999999999999999998899999999 579999999999988762222 33344433222 248
Q ss_pred CcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 140 PNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 140 fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
||+|++...+ ..+ +++.+.+.|+|+
T Consensus 123 ~D~v~~~~~~----~~~-~l~~~~~~Lkpg 147 (204)
T 3njr_A 123 PEAVFIGGGG----SQA-LYDRLWEWLAPG 147 (204)
T ss_dssp CSEEEECSCC----CHH-HHHHHHHHSCTT
T ss_pred CCEEEECCcc----cHH-HHHHHHHhcCCC
Confidence 9999987644 456 999999999996
No 45
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.54 E-value=3.2e-15 Score=108.23 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=81.7
Q ss_pred ecchHHHHHHHHHhccCC-C-CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEc
Q 030935 51 VWPCSVILAEYVWQQRYR-F-SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTW 128 (169)
Q Consensus 51 ~W~~~~~La~~l~~~~~~-~-~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~ 128 (169)
..|....+.+.+...... . ++++|||+|||+|..++.+++.+.+|+++|++ +.+++.+++|+..+++++++...++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~~~d~ 97 (171)
T 1ws6_A 20 ARPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKD--PEAVRLLKENVRRTGLGARVVALPV 97 (171)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCC--HHHHHHHHHHHHHHTCCCEEECSCH
T ss_pred CCCCHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCC--HHHHHHHHHHHHHcCCceEEEeccH
Confidence 444555555554443221 2 67899999999999999999999899999999 5799999999998887444333222
Q ss_pred CCCCcCC--CCCCCcEEEEcCcCCCCCChHHHHHHHH--HhccCC
Q 030935 129 GFLDASI--FDLNPNIILGADVFYDASGKICAFEILI--CSLFPI 169 (169)
Q Consensus 129 ~~~~~~~--~~~~fDlIi~sd~iy~~~~~~~l~~~l~--~~L~p~ 169 (169)
.+..... ...+||+|++..+++ ...+.+++.+. +.|+|+
T Consensus 98 ~~~~~~~~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~g 140 (171)
T 1ws6_A 98 EVFLPEAKAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAG 140 (171)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEE
T ss_pred HHHHHhhhccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCC
Confidence 2211011 123799999976644 77788888888 888874
No 46
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.54 E-value=5.1e-14 Score=103.66 Aligned_cols=109 Identities=9% Similarity=-0.067 Sum_probs=76.0
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--
Q 030935 56 VILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-- 133 (169)
Q Consensus 56 ~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-- 133 (169)
..+++.+.... ..++.+|||+|||+|..++.+++.+.+|+++|++ +.+++.+++|++.+++. ++.... ++...
T Consensus 9 ~~~~~~~l~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s--~~~l~~a~~~~~~~~~~-~v~~~~-~~~~~l~ 83 (185)
T 3mti_A 9 IHMSHDFLAEV-LDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQ--EQALGKTSQRLSDLGIE-NTELIL-DGHENLD 83 (185)
T ss_dssp HHHHHHHHHTT-CCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESC--HHHHHHHHHHHHHHTCC-CEEEEE-SCGGGGG
T ss_pred HHHHHHHHHHh-CCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECC--HHHHHHHHHHHHHcCCC-cEEEEe-CcHHHHH
Confidence 34444444332 3367899999999999999999998899999999 67999999999988863 222122 33322
Q ss_pred CCCCCCCcEEEEcCcCCC---------CCChHHHHHHHHHhccCC
Q 030935 134 SIFDLNPNIILGADVFYD---------ASGKICAFEILICSLFPI 169 (169)
Q Consensus 134 ~~~~~~fDlIi~sd~iy~---------~~~~~~l~~~l~~~L~p~ 169 (169)
...+.+||+|+++-..+. ......+++.+.+.|+|+
T Consensus 84 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 128 (185)
T 3mti_A 84 HYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG 128 (185)
T ss_dssp GTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE
T ss_pred hhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC
Confidence 123568999987632221 133456788999999985
No 47
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.53 E-value=1.5e-14 Score=110.34 Aligned_cols=93 Identities=12% Similarity=0.035 Sum_probs=76.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCc
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADV 148 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~ 148 (169)
.++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++... .+.+. .++......+.+||+|++..+
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~~a~~~~~~---~v~~~---~~d~~~~~~~~~fD~v~~~~~ 112 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFNDITCVEAS--EEAISHAQGRLKD---GITYI---HSRFEDAQLPRRYDNIVLTHV 112 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCSCEEEEESC--HHHHHHHHHHSCS---CEEEE---ESCGGGCCCSSCEEEEEEESC
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCC--HHHHHHHHHhhhC---CeEEE---EccHHHcCcCCcccEEEEhhH
Confidence 467799999999999999999999999999999 5699999887653 33333 233333334568999999999
Q ss_pred CCCCCChHHHHHHHH-HhccCC
Q 030935 149 FYDASGKICAFEILI-CSLFPI 169 (169)
Q Consensus 149 iy~~~~~~~l~~~l~-~~L~p~ 169 (169)
+++..+.+.+++.+. +.|+|+
T Consensus 113 l~~~~~~~~~l~~~~~~~Lkpg 134 (250)
T 2p7i_A 113 LEHIDDPVALLKRINDDWLAEG 134 (250)
T ss_dssp GGGCSSHHHHHHHHHHTTEEEE
T ss_pred HHhhcCHHHHHHHHHHHhcCCC
Confidence 999999999999999 999985
No 48
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.53 E-value=7.2e-14 Score=107.79 Aligned_cols=109 Identities=15% Similarity=0.026 Sum_probs=82.0
Q ss_pred HHHHHHHh-ccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCC
Q 030935 57 ILAEYVWQ-QRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASI 135 (169)
Q Consensus 57 ~La~~l~~-~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~ 135 (169)
.+.+.+.. .....++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.+++++.....++.+...++.+ .+.
T Consensus 25 ~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~d~~~--~~~ 100 (263)
T 2yqz_A 25 QIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDAD--AAMLEVFRQKIAGVDRKVQVVQADARA--IPL 100 (263)
T ss_dssp HHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESC--HHHHHHHHHHTTTSCTTEEEEESCTTS--CCS
T ss_pred HHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECC--HHHHHHHHHHhhccCCceEEEEccccc--CCC
Confidence 34444433 2233467899999999999999999999999999999 569999998872222234433333322 123
Q ss_pred CCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 136 FDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 136 ~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.+.+||+|+++.++++..+.+.+++.+.+.|+|+
T Consensus 101 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg 134 (263)
T 2yqz_A 101 PDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPG 134 (263)
T ss_dssp CTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEE
T ss_pred CCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCC
Confidence 3468999999999999999999999999999985
No 49
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.53 E-value=6.1e-14 Score=113.96 Aligned_cols=108 Identities=20% Similarity=0.229 Sum_probs=83.3
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-CC
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-SI 135 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~~ 135 (169)
..+.+.++....++++|||+|||+|.+++.+++.|+ +|+++|+++ +++.++++++.+++..++. +..++... +.
T Consensus 54 ~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~---~l~~a~~~~~~~~~~~~v~-~~~~d~~~~~~ 129 (349)
T 3q7e_A 54 YRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS---ISDYAVKIVKANKLDHVVT-IIKGKVEEVEL 129 (349)
T ss_dssp HHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST---HHHHHHHHHHHTTCTTTEE-EEESCTTTCCC
T ss_pred HHHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH---HHHHHHHHHHHcCCCCcEE-EEECcHHHccC
Confidence 334455544456789999999999999999999987 999999993 9999999999998864332 33334332 23
Q ss_pred CCCCCcEEEEcCc---CCCCCChHHHHHHHHHhccCC
Q 030935 136 FDLNPNIILGADV---FYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 136 ~~~~fDlIi~sd~---iy~~~~~~~l~~~l~~~L~p~ 169 (169)
...+||+|++..+ +++....+.+++.+.+.|+|+
T Consensus 130 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~Lkpg 166 (349)
T 3q7e_A 130 PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD 166 (349)
T ss_dssp SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE
T ss_pred CCCceEEEEEccccccccCchhHHHHHHHHHHhCCCC
Confidence 3469999999765 345588999999999999985
No 50
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.53 E-value=2.2e-14 Score=111.63 Aligned_cols=124 Identities=16% Similarity=0.105 Sum_probs=89.0
Q ss_pred ceEEEEeccccCCcceeecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHH
Q 030935 34 SFSIAIIENMKEEYGLFVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRV 113 (169)
Q Consensus 34 ~~~i~i~~~~~~~~g~~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n 113 (169)
.+.+.+.+.+..++ -..+.+....+++... ..++.+|||+|||+|.+++.+++.|++|+++|+++ .+++.+++|
T Consensus 88 ~~~~~l~p~~~fgt--g~~~tt~~~~~~l~~~--~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~--~~v~~a~~n 161 (254)
T 2nxc_A 88 EIPLVIEPGMAFGT--GHHETTRLALKALARH--LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDP--MVLPQAEAN 161 (254)
T ss_dssp SEEEECCCC-------CCSHHHHHHHHHHHHH--CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCG--GGHHHHHHH
T ss_pred ceEEEECCCccccC--CCCHHHHHHHHHHHHh--cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCH--HHHHHHHHH
Confidence 34455544444334 4467777777777655 24678999999999999999999999999999995 599999999
Q ss_pred HHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 114 CEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 114 ~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+..|++.+++. .++........+||+|+++-+. ..+..+++.+.+.|+|+
T Consensus 162 ~~~~~~~v~~~---~~d~~~~~~~~~fD~Vv~n~~~---~~~~~~l~~~~~~Lkpg 211 (254)
T 2nxc_A 162 AKRNGVRPRFL---EGSLEAALPFGPFDLLVANLYA---ELHAALAPRYREALVPG 211 (254)
T ss_dssp HHHTTCCCEEE---ESCHHHHGGGCCEEEEEEECCH---HHHHHHHHHHHHHEEEE
T ss_pred HHHcCCcEEEE---ECChhhcCcCCCCCEEEECCcH---HHHHHHHHHHHHHcCCC
Confidence 99998764333 3333222334589999986432 23678899999999985
No 51
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.53 E-value=1.4e-14 Score=109.04 Aligned_cols=112 Identities=16% Similarity=0.055 Sum_probs=79.1
Q ss_pred cchHHHHHHHHHhccCC-CCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCC-cceEEEEEc
Q 030935 52 WPCSVILAEYVWQQRYR-FSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKL-NCRVMGLTW 128 (169)
Q Consensus 52 W~~~~~La~~l~~~~~~-~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~-~~~~~~l~~ 128 (169)
-|....+.+.+...... .++.+|||+|||+|.+++.+++.++ +|+++|++ +.+++.+++|++.+++ +++ +..
T Consensus 35 rp~~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s--~~~l~~a~~~~~~~~~~~v~---~~~ 109 (202)
T 2fpo_A 35 RPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMD--RAVSQQLIKNLATLKAGNAR---VVN 109 (202)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSC--HHHHHHHHHHHHHTTCCSEE---EEC
T ss_pred CCCHHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECC--HHHHHHHHHHHHHcCCCcEE---EEE
Confidence 34444444444332211 2678999999999999998888776 89999999 6799999999999887 333 333
Q ss_pred CCCCc--CCCCCCCcEEEEcCcCCCCCChHHHHHHHHHh--ccCC
Q 030935 129 GFLDA--SIFDLNPNIILGADVFYDASGKICAFEILICS--LFPI 169 (169)
Q Consensus 129 ~~~~~--~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~--L~p~ 169 (169)
++... +....+||+|++..+ |.....+.+++.+.+. |+|+
T Consensus 110 ~D~~~~~~~~~~~fD~V~~~~p-~~~~~~~~~l~~l~~~~~L~pg 153 (202)
T 2fpo_A 110 SNAMSFLAQKGTPHNIVFVDPP-FRRGLLEETINLLEDNGWLADE 153 (202)
T ss_dssp SCHHHHHSSCCCCEEEEEECCS-SSTTTHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHhhcCCCCCEEEECCC-CCCCcHHHHHHHHHhcCccCCC
Confidence 44322 223458999998655 7778888899998764 8874
No 52
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.52 E-value=1.9e-14 Score=108.33 Aligned_cols=108 Identities=12% Similarity=-0.072 Sum_probs=78.2
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHh-------------CCcceE
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMN-------------KLNCRV 123 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n-------------~~~~~~ 123 (169)
.|.+|+... ...++.+|||+|||+|..+..+++.|.+|+++|+| +.|++.++++.... ..++++
T Consensus 10 ~l~~~~~~l-~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S--~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~ 86 (203)
T 1pjz_A 10 DLQQYWSSL-NVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELS--EAAVERYFTERGEQPHITSQGDFKVYAAPGIEI 86 (203)
T ss_dssp HHHHHHHHH-CCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEEC--HHHHHHHHHHHCSCSEEEEETTEEEEECSSSEE
T ss_pred HHHHHHHhc-ccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCC--HHHHHHHHHHccCCcccccccccccccCCccEE
Confidence 455565443 23367899999999999999999999999999999 56999998876431 223444
Q ss_pred EEEEcCCCCcCCCC-CCCcEEEEcCcCCCCC--ChHHHHHHHHHhccCC
Q 030935 124 MGLTWGFLDASIFD-LNPNIILGADVFYDAS--GKICAFEILICSLFPI 169 (169)
Q Consensus 124 ~~l~~~~~~~~~~~-~~fDlIi~sd~iy~~~--~~~~l~~~l~~~L~p~ 169 (169)
...+..+. +..+ .+||+|++..++++.. ....+++.+++.|+|+
T Consensus 87 ~~~d~~~l--~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg 133 (203)
T 1pjz_A 87 WCGDFFAL--TARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA 133 (203)
T ss_dssp EEECCSSS--THHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE
T ss_pred EECccccC--CcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC
Confidence 33333221 1122 5899999988887664 3456899999999996
No 53
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.52 E-value=2.9e-14 Score=112.12 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=81.9
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCc-----ceEEEEEcCCCC
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLN-----CRVMGLTWGFLD 132 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-----~~~~~l~~~~~~ 132 (169)
+.+++.......++.+|||+|||+|..++.+++.|++|+++|++ +.+++.+++++...+.. +.+...++....
T Consensus 45 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 122 (293)
T 3thr_A 45 YKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDAS--DKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD 122 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH
T ss_pred HHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECC--HHHHHHHHHhhhhcccccccceeeEeecChhhCc
Confidence 33444444333467899999999999999999999999999999 57999999987544332 222323332211
Q ss_pred cC-CCCCCCcEEEEc-CcCCCCCC-------hHHHHHHHHHhccCC
Q 030935 133 AS-IFDLNPNIILGA-DVFYDASG-------KICAFEILICSLFPI 169 (169)
Q Consensus 133 ~~-~~~~~fDlIi~s-d~iy~~~~-------~~~l~~~l~~~L~p~ 169 (169)
.. ..+.+||+|++. .++++..+ ...+++.+.+.|+||
T Consensus 123 ~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkpg 168 (293)
T 3thr_A 123 KDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG 168 (293)
T ss_dssp HHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEE
T ss_pred cccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCC
Confidence 00 245699999998 89999888 999999999999985
No 54
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.52 E-value=5.3e-14 Score=107.41 Aligned_cols=105 Identities=12% Similarity=0.057 Sum_probs=81.1
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF 136 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~ 136 (169)
.+.+++..... ++.+|||+|||+|..+..+++.+++|+++|++ +.+++.++++.. ...+.+...+..+. +..
T Consensus 42 ~~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~~--~~~~~~~~~d~~~~--~~~ 113 (242)
T 3l8d_A 42 TIIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDIS--EVMIQKGKERGE--GPDLSFIKGDLSSL--PFE 113 (242)
T ss_dssp THHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHTTTC--BTTEEEEECBTTBC--SSC
T ss_pred HHHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECC--HHHHHHHHhhcc--cCCceEEEcchhcC--CCC
Confidence 34555554432 67899999999999999999999999999999 569999887752 22233333333322 234
Q ss_pred CCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 137 DLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+.+||+|++..++++..+...+++.+.+.|+|+
T Consensus 114 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg 146 (242)
T 3l8d_A 114 NEQFEAIMAINSLEWTEEPLRALNEIKRVLKSD 146 (242)
T ss_dssp TTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEE
T ss_pred CCCccEEEEcChHhhccCHHHHHHHHHHHhCCC
Confidence 569999999999999999999999999999985
No 55
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.52 E-value=2.3e-14 Score=109.25 Aligned_cols=95 Identities=14% Similarity=-0.059 Sum_probs=78.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcC-c
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGAD-V 148 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd-~ 148 (169)
++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++...++..+.+... +......+.+||+|+++. +
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s--~~~~~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~fD~v~~~~~~ 111 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLS--QEMLSEAENKFRSQGLKPRLACQ---DISNLNINRKFDLITCCLDS 111 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSSEEEEECSC--HHHHHHHHHHHHHTTCCCEEECC---CGGGCCCSCCEEEEEECTTG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCCcEEEEECC--HHHHHHHHHHHhhcCCCeEEEec---ccccCCccCCceEEEEcCcc
Confidence 67899999999999999999999999999999 56999999999877765544433 332222236899999997 9
Q ss_pred CCCC---CChHHHHHHHHHhccCC
Q 030935 149 FYDA---SGKICAFEILICSLFPI 169 (169)
Q Consensus 149 iy~~---~~~~~l~~~l~~~L~p~ 169 (169)
+++. .+...+++.+.+.|+|+
T Consensus 112 l~~~~~~~~~~~~l~~~~~~L~pg 135 (246)
T 1y8c_A 112 TNYIIDSDDLKKYFKAVSNHLKEG 135 (246)
T ss_dssp GGGCCSHHHHHHHHHHHHTTEEEE
T ss_pred ccccCCHHHHHHHHHHHHHhcCCC
Confidence 9888 67888999999999985
No 56
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.52 E-value=1.4e-14 Score=111.04 Aligned_cols=97 Identities=12% Similarity=-0.012 Sum_probs=76.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVF 149 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~i 149 (169)
++.+|||+|||+|..++.+++.+.+|+++|++ +.+++.+++|++.+++..++. +..++......+.+||+|+++.++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDID--PVKIALARNNAEVYGIADKIE-FICGDFLLLASFLKADVVFLSPPW 154 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCGGGEE-EEESCHHHHGGGCCCSEEEECCCC
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHHcCCCcCeE-EEECChHHhcccCCCCEEEECCCc
Confidence 67899999999999999999999999999999 579999999999998732222 333343222244699999998888
Q ss_pred CCCCChHHHHHHHHHhccCC
Q 030935 150 YDASGKICAFEILICSLFPI 169 (169)
Q Consensus 150 y~~~~~~~l~~~l~~~L~p~ 169 (169)
++.......+..+.+.|+|+
T Consensus 155 ~~~~~~~~~~~~~~~~L~pg 174 (241)
T 3gdh_A 155 GGPDYATAETFDIRTMMSPD 174 (241)
T ss_dssp SSGGGGGSSSBCTTTSCSSC
T ss_pred CCcchhhhHHHHHHhhcCCc
Confidence 87776666666777778875
No 57
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.52 E-value=3e-14 Score=109.18 Aligned_cols=105 Identities=9% Similarity=-0.075 Sum_probs=77.8
Q ss_pred HHHHHHHHhccC-CCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC
Q 030935 56 VILAEYVWQQRY-RFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS 134 (169)
Q Consensus 56 ~~La~~l~~~~~-~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~ 134 (169)
..+.+.+..... ..++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++ +++...+..+...+
T Consensus 26 ~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~~a~~~-------~~~~~~d~~~~~~~ 96 (240)
T 3dli_A 26 ELVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDIN--EDMIKFCEGK-------FNVVKSDAIEYLKS 96 (240)
T ss_dssp HHHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSC--HHHHHHHHTT-------SEEECSCHHHHHHT
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECC--HHHHHHHHhh-------cceeeccHHHHhhh
Confidence 334444433322 3356899999999999999999999999999999 5699988876 22222222111113
Q ss_pred CCCCCCcEEEEcCcCCCCC--ChHHHHHHHHHhccCC
Q 030935 135 IFDLNPNIILGADVFYDAS--GKICAFEILICSLFPI 169 (169)
Q Consensus 135 ~~~~~fDlIi~sd~iy~~~--~~~~l~~~l~~~L~p~ 169 (169)
..+.+||+|++..++++.. .+..+++.+.+.|+|+
T Consensus 97 ~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 133 (240)
T 3dli_A 97 LPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYS 133 (240)
T ss_dssp SCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTT
T ss_pred cCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCC
Confidence 4556999999999999998 5599999999999996
No 58
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.52 E-value=5e-14 Score=105.80 Aligned_cols=90 Identities=19% Similarity=0.175 Sum_probs=74.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVF 149 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~i 149 (169)
++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++. +. .+...+.... ..+.+||+|+++.++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~---~~--~~~~~d~~~~---~~~~~fD~v~~~~~l 112 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGFDVDATDGS--PELAAEASRRL---GR--PVRTMLFHQL---DAIDAYDAVWAHACL 112 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHHHH---TS--CCEECCGGGC---CCCSCEEEEEECSCG
T ss_pred CCCcEEEECCCCCHHHHHHHHcCCeEEEECCC--HHHHHHHHHhc---CC--ceEEeeeccC---CCCCcEEEEEecCch
Confidence 57899999999999999999999999999999 56999999887 22 2232333322 245699999999999
Q ss_pred CCCC--ChHHHHHHHHHhccCC
Q 030935 150 YDAS--GKICAFEILICSLFPI 169 (169)
Q Consensus 150 y~~~--~~~~l~~~l~~~L~p~ 169 (169)
++.. ....+++.+.+.|+|+
T Consensus 113 ~~~~~~~~~~~l~~~~~~Lkpg 134 (211)
T 3e23_A 113 LHVPRDELADVLKLIWRALKPG 134 (211)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEE
T ss_pred hhcCHHHHHHHHHHHHHhcCCC
Confidence 9987 8889999999999985
No 59
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.52 E-value=3.8e-14 Score=108.13 Aligned_cols=97 Identities=16% Similarity=0.056 Sum_probs=77.2
Q ss_pred CCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEE
Q 030935 67 YRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILG 145 (169)
Q Consensus 67 ~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~ 145 (169)
...++.+|||+|||+|..+..+++.+. +|+++|++ +.+++.++++...+ .+.+...+.... +..+.+||+|++
T Consensus 40 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s--~~~~~~a~~~~~~~--~~~~~~~d~~~~--~~~~~~fD~v~~ 113 (243)
T 3bkw_A 40 PEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLS--EKMLARARAAGPDT--GITYERADLDKL--HLPQDSFDLAYS 113 (243)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESC--HHHHHHHHHTSCSS--SEEEEECCGGGC--CCCTTCEEEEEE
T ss_pred cccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCC--HHHHHHHHHhcccC--CceEEEcChhhc--cCCCCCceEEEE
Confidence 344678999999999999999999988 99999999 56999998876543 233332322221 233468999999
Q ss_pred cCcCCCCCChHHHHHHHHHhccCC
Q 030935 146 ADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 146 sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+.++++..+...+++.+.+.|+|+
T Consensus 114 ~~~l~~~~~~~~~l~~~~~~L~pg 137 (243)
T 3bkw_A 114 SLALHYVEDVARLFRTVHQALSPG 137 (243)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEE
T ss_pred eccccccchHHHHHHHHHHhcCcC
Confidence 999999999999999999999985
No 60
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.52 E-value=1.1e-13 Score=103.12 Aligned_cols=95 Identities=16% Similarity=0.112 Sum_probs=75.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVF 149 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~i 149 (169)
++ +|||+|||+|..+..+++.+.+|+++|++ +.+++.++++...++..+.+...+..+. +..+.+||+|+++.+.
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~v~~~~~~ 104 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGYEVTAVDQS--SVGLAKAKQLAQEKGVKITTVQSNLADF--DIVADAWEGIVSIFCH 104 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTCEEEEECSS--HHHHHHHHHHHHHHTCCEEEECCBTTTB--SCCTTTCSEEEEECCC
T ss_pred CC-CEEEECCCCCHhHHHHHhCCCeEEEEECC--HHHHHHHHHHHHhcCCceEEEEcChhhc--CCCcCCccEEEEEhhc
Confidence 45 99999999999999999999999999999 5799999999988876554443333222 2334689999997554
Q ss_pred CCCCChHHHHHHHHHhccCC
Q 030935 150 YDASGKICAFEILICSLFPI 169 (169)
Q Consensus 150 y~~~~~~~l~~~l~~~L~p~ 169 (169)
+.......+++.+.+.|+|+
T Consensus 105 ~~~~~~~~~l~~~~~~L~pg 124 (202)
T 2kw5_A 105 LPSSLRQQLYPKVYQGLKPG 124 (202)
T ss_dssp CCHHHHHHHHHHHHTTCCSS
T ss_pred CCHHHHHHHHHHHHHhcCCC
Confidence 44467888999999999996
No 61
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.51 E-value=1e-13 Score=111.64 Aligned_cols=106 Identities=21% Similarity=0.195 Sum_probs=80.3
Q ss_pred HHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-CCCC
Q 030935 60 EYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-SIFD 137 (169)
Q Consensus 60 ~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~~~~ 137 (169)
+.+.+.....++++|||+|||+|.+++.+++.|+ +|+++|+++ +++.++++++.+++..++. +..++... ....
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~---~~~~a~~~~~~~~~~~~i~-~~~~d~~~~~~~~ 103 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS---IIEMAKELVELNGFSDKIT-LLRGKLEDVHLPF 103 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESST---HHHHHHHHHHHTTCTTTEE-EEESCTTTSCCSS
T ss_pred HHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHH---HHHHHHHHHHHcCCCCCEE-EEECchhhccCCC
Confidence 3444333345788999999999999999999987 899999993 8999999999998764433 33344333 2233
Q ss_pred CCCcEEEEcCcC---CCCCChHHHHHHHHHhccCC
Q 030935 138 LNPNIILGADVF---YDASGKICAFEILICSLFPI 169 (169)
Q Consensus 138 ~~fDlIi~sd~i---y~~~~~~~l~~~l~~~L~p~ 169 (169)
.+||+|++..+. .+...++.++..+.+.|+|+
T Consensus 104 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~Lkpg 138 (328)
T 1g6q_1 104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG 138 (328)
T ss_dssp SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE
T ss_pred CcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCC
Confidence 689999997543 45677889999999999985
No 62
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.51 E-value=5e-14 Score=106.20 Aligned_cols=92 Identities=17% Similarity=0.005 Sum_probs=74.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVF 149 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~i 149 (169)
++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++.. ..+.+. .++......+.+||+|++..++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~~---~~~~~~---~~d~~~~~~~~~fD~v~~~~~l 116 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPS--REMRMIAKEKLP---KEFSIT---EGDFLSFEVPTSIDTIVSTYAF 116 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSC--HHHHHHHHHHSC---TTCCEE---SCCSSSCCCCSCCSEEEEESCG
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCC--HHHHHHHHHhCC---CceEEE---eCChhhcCCCCCeEEEEECcch
Confidence 57899999999999999999999999999999 569999988765 223333 2333222222799999999999
Q ss_pred CCCCChHH--HHHHHHHhccCC
Q 030935 150 YDASGKIC--AFEILICSLFPI 169 (169)
Q Consensus 150 y~~~~~~~--l~~~l~~~L~p~ 169 (169)
++....+. +++.+.+.|+|+
T Consensus 117 ~~~~~~~~~~~l~~~~~~Lkpg 138 (220)
T 3hnr_A 117 HHLTDDEKNVAIAKYSQLLNKG 138 (220)
T ss_dssp GGSCHHHHHHHHHHHHHHSCTT
T ss_pred hcCChHHHHHHHHHHHHhcCCC
Confidence 99988877 999999999996
No 63
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=1.2e-13 Score=106.51 Aligned_cols=99 Identities=13% Similarity=0.027 Sum_probs=78.2
Q ss_pred HHhccCCCCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCC
Q 030935 62 VWQQRYRFSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLN 139 (169)
Q Consensus 62 l~~~~~~~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~ 139 (169)
+.......++.+|||+|||+|..+..+++. +.+|+++|++ +.+++.++++ ...+.+...+..+. + .+.+
T Consensus 25 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s--~~~~~~a~~~----~~~~~~~~~d~~~~--~-~~~~ 95 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSD--DDMLEKAADR----LPNTNFGKADLATW--K-PAQK 95 (259)
T ss_dssp HHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESC--HHHHHHHHHH----STTSEEEECCTTTC--C-CSSC
T ss_pred HHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHh----CCCcEEEECChhhc--C-ccCC
Confidence 444444456789999999999999999987 7799999999 5699998887 22334443333322 2 3568
Q ss_pred CcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 140 PNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 140 fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
||+|+++.++++..+...+++.+.+.|+|+
T Consensus 96 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg 125 (259)
T 2p35_A 96 ADLLYANAVFQWVPDHLAVLSQLMDQLESG 125 (259)
T ss_dssp EEEEEEESCGGGSTTHHHHHHHHGGGEEEE
T ss_pred cCEEEEeCchhhCCCHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999985
No 64
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.51 E-value=1.1e-13 Score=109.44 Aligned_cols=106 Identities=11% Similarity=-0.048 Sum_probs=81.9
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHH---hCCeEEEEcCCCcHHHHHHHHHHHHHh---CCcceEEEEEcCCC
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAK---VGSNVTLTDDSNRIEVLKNMRRVCEMN---KLNCRVMGLTWGFL 131 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~---~ga~V~~~D~~~~~~~l~~~~~n~~~n---~~~~~~~~l~~~~~ 131 (169)
+.+++..... .++.+|||+|||+|..+..+++ .+.+|+++|++ +.+++.++++++.+ ...+.+...+..+.
T Consensus 25 ~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~ 101 (299)
T 3g5t_A 25 FYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLS--ATMIKTAEVIKEGSPDTYKNVSFKISSSDDF 101 (299)
T ss_dssp HHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESC--HHHHHHHHHHHHHCC-CCTTEEEEECCTTCC
T ss_pred HHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHhccCCCCceEEEEcCHHhC
Confidence 4445544322 3678999999999999999995 45699999999 57999999999876 33444444444332
Q ss_pred CcCCCC------CCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 132 DASIFD------LNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 132 ~~~~~~------~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+... .+||+|+++.++++. +...+++.+.+.|+||
T Consensus 102 --~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~Lkpg 142 (299)
T 3g5t_A 102 --KFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKD 142 (299)
T ss_dssp --GGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEE
T ss_pred --CccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCC
Confidence 2223 589999999999999 9999999999999985
No 65
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.51 E-value=9e-14 Score=105.82 Aligned_cols=96 Identities=16% Similarity=0.118 Sum_probs=76.5
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEE
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILG 145 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~ 145 (169)
..++.+|||+|||+|..+..+++. +.+|+++|++ +.+++.+++++..++ .+.+. .++......+.+||+|++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~-~~~~~---~~d~~~~~~~~~fD~v~~ 115 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMS--EKMLEIAKNRFRGNL-KVKYI---EADYSKYDFEEKYDMVVS 115 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESC--HHHHHHHHHHTCSCT-TEEEE---ESCTTTCCCCSCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECC--HHHHHHHHHhhccCC-CEEEE---eCchhccCCCCCceEEEE
Confidence 446789999999999999999998 6699999999 569999999886555 44433 334333223369999999
Q ss_pred cCcCCCCCChH--HHHHHHHHhccCC
Q 030935 146 ADVFYDASGKI--CAFEILICSLFPI 169 (169)
Q Consensus 146 sd~iy~~~~~~--~l~~~l~~~L~p~ 169 (169)
+.++++....+ .+++.+.+.|+|+
T Consensus 116 ~~~l~~~~~~~~~~~l~~~~~~Lkpg 141 (234)
T 3dtn_A 116 ALSIHHLEDEDKKELYKRSYSILKES 141 (234)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred eCccccCCHHHHHHHHHHHHHhcCCC
Confidence 99999987655 5999999999985
No 66
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.51 E-value=1.7e-14 Score=105.60 Aligned_cols=116 Identities=16% Similarity=0.125 Sum_probs=79.0
Q ss_pred eecchHHHHHHHHHhccC-CCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEE
Q 030935 50 FVWPCSVILAEYVWQQRY-RFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLT 127 (169)
Q Consensus 50 ~~W~~~~~La~~l~~~~~-~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~ 127 (169)
...|....+.+.+..... ..++++|||+|||+|..++.+++.+. +|+++|++ +.+++.+++|++.+++..++. +.
T Consensus 10 ~~rp~~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~-~~ 86 (177)
T 2esr_A 10 ITRPTSDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKN--RKAQAIIQDNIIMTKAENRFT-LL 86 (177)
T ss_dssp --------CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCC--HHHHHHHHHHHHTTTCGGGEE-EE
T ss_pred CCCcCHHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECC--HHHHHHHHHHHHHcCCCCceE-EE
Confidence 344555555666655433 45778999999999999999998875 99999999 579999999999888753332 33
Q ss_pred cCCCCc--CCCCCCCcEEEEcCcCCCCCChHHHHHHHH--HhccCC
Q 030935 128 WGFLDA--SIFDLNPNIILGADVFYDASGKICAFEILI--CSLFPI 169 (169)
Q Consensus 128 ~~~~~~--~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~--~~L~p~ 169 (169)
.++... ...+.+||+|++..+ |.....+.+++.+. +.|+|+
T Consensus 87 ~~d~~~~~~~~~~~fD~i~~~~~-~~~~~~~~~~~~l~~~~~L~~g 131 (177)
T 2esr_A 87 KMEAERAIDCLTGRFDLVFLDPP-YAKETIVATIEALAAKNLLSEQ 131 (177)
T ss_dssp CSCHHHHHHHBCSCEEEEEECCS-SHHHHHHHHHHHHHHTTCEEEE
T ss_pred ECcHHHhHHhhcCCCCEEEECCC-CCcchHHHHHHHHHhCCCcCCC
Confidence 444322 122357999998654 54456677888887 788874
No 67
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.50 E-value=3.1e-14 Score=111.37 Aligned_cols=100 Identities=11% Similarity=-0.003 Sum_probs=76.1
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCC
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFD 137 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~ 137 (169)
|.+++.+... .+.+|||||||+|..+..+++.+.+|+++|++ +.|++.++++ .++.+...+..+ .++.+
T Consensus 29 l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s--~~ml~~a~~~-----~~v~~~~~~~e~--~~~~~ 97 (257)
T 4hg2_A 29 LFRWLGEVAP--ARGDALDCGCGSGQASLGLAEFFERVHAVDPG--EAQIRQALRH-----PRVTYAVAPAED--TGLPP 97 (257)
T ss_dssp HHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTTCSEEEEEESC--HHHHHTCCCC-----TTEEEEECCTTC--CCCCS
T ss_pred HHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCc--HHhhhhhhhc-----CCceeehhhhhh--hcccC
Confidence 5567766543 45689999999999999999999999999999 5698876532 223333222222 23455
Q ss_pred CCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 138 LNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 138 ~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.+||+|+++.++|+. +.+.+++.+++.||||
T Consensus 98 ~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpg 128 (257)
T 4hg2_A 98 ASVDVAIAAQAMHWF-DLDRFWAELRRVARPG 128 (257)
T ss_dssp SCEEEEEECSCCTTC-CHHHHHHHHHHHEEEE
T ss_pred CcccEEEEeeehhHh-hHHHHHHHHHHHcCCC
Confidence 699999999999877 5889999999999996
No 68
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=3.3e-14 Score=110.58 Aligned_cols=102 Identities=13% Similarity=-0.008 Sum_probs=79.5
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF 136 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~ 136 (169)
.+++++.+.....++.+|||+|||+|..+..+++.+++|+++|++ +.+++.++.+. ++.+...++.+ .+..
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~~a~~~~-----~~~~~~~d~~~--~~~~ 91 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPS--IVMRQQAVVHP-----QVEWFTGYAEN--LALP 91 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSC--HHHHHSSCCCT-----TEEEECCCTTS--CCSC
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCC--HHHHHHHHhcc-----CCEEEECchhh--CCCC
Confidence 456666665555578899999999999999999988999999999 56888766543 33333233222 1334
Q ss_pred CCCCcEEEEcCcCCCCCChHHHHHHHHHhcc
Q 030935 137 DLNPNIILGADVFYDASGKICAFEILICSLF 167 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~ 167 (169)
+.+||+|++..++++..+.+.+++.+.+.|+
T Consensus 92 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk 122 (261)
T 3ege_A 92 DKSVDGVISILAIHHFSHLEKSFQEMQRIIR 122 (261)
T ss_dssp TTCBSEEEEESCGGGCSSHHHHHHHHHHHBC
T ss_pred CCCEeEEEEcchHhhccCHHHHHHHHHHHhC
Confidence 5699999999999999999999999999998
No 69
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.50 E-value=2.4e-13 Score=106.66 Aligned_cols=112 Identities=13% Similarity=0.106 Sum_probs=84.2
Q ss_pred cchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEc
Q 030935 52 WPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTW 128 (169)
Q Consensus 52 W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~ 128 (169)
-|.+..+.+++..... .++.+|||+|||+|.+++.+++. +.+|+++|++ +.+++.+++|++.+++. +. +..
T Consensus 92 r~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s--~~~l~~a~~n~~~~~~~~v~---~~~ 165 (276)
T 2b3t_A 92 RPDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRM--PDAVSLAQRNAQHLAIKNIH---ILQ 165 (276)
T ss_dssp CTTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSS--HHHHHHHHHHHHHHTCCSEE---EEC
T ss_pred CchHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHHHcCCCceE---EEE
Confidence 4667788888776543 45679999999999999999975 5699999999 57999999999988875 33 334
Q ss_pred CCCCcCCCCCCCcEEEEcCcCCCC-------------------------CChHHHHHHHHHhccCC
Q 030935 129 GFLDASIFDLNPNIILGADVFYDA-------------------------SGKICAFEILICSLFPI 169 (169)
Q Consensus 129 ~~~~~~~~~~~fDlIi~sd~iy~~-------------------------~~~~~l~~~l~~~L~p~ 169 (169)
++......+.+||+|+++.+.... ..+..+++.+.+.|+|+
T Consensus 166 ~d~~~~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkpg 231 (276)
T 2b3t_A 166 SDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSG 231 (276)
T ss_dssp CSTTGGGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEE
T ss_pred cchhhhcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCC
Confidence 444433335689999997544322 23467888888899885
No 70
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.50 E-value=1.8e-13 Score=102.06 Aligned_cols=91 Identities=13% Similarity=-0.030 Sum_probs=73.5
Q ss_pred CCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcCC
Q 030935 71 GANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVFY 150 (169)
Q Consensus 71 ~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~iy 150 (169)
+.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++.. .+.+...+..+. +..+.+||+|++..+++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~~a~~~~~----~~~~~~~d~~~~--~~~~~~fD~v~~~~~l~ 113 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPA--TRLVELARQTHP----SVTFHHGTITDL--SDSPKRWAGLLAWYSLI 113 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCC--HHHHHHHHHHCT----TSEEECCCGGGG--GGSCCCEEEEEEESSST
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCC--HHHHHHHHHhCC----CCeEEeCccccc--ccCCCCeEEEEehhhHh
Confidence 6799999999999999999999999999999 569999888632 333333333221 23356999999999999
Q ss_pred CCC--ChHHHHHHHHHhccCC
Q 030935 151 DAS--GKICAFEILICSLFPI 169 (169)
Q Consensus 151 ~~~--~~~~l~~~l~~~L~p~ 169 (169)
+.. +...+++.+.+.|+|+
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pg 134 (203)
T 3h2b_A 114 HMGPGELPDALVALRMAVEDG 134 (203)
T ss_dssp TCCTTTHHHHHHHHHHTEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCC
Confidence 886 8999999999999985
No 71
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.49 E-value=6.2e-15 Score=110.38 Aligned_cols=110 Identities=6% Similarity=-0.042 Sum_probs=85.1
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCC
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGF 130 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~ 130 (169)
|.=..+-..+.... .+..+|||||||+|.+++.++.. +++|+++|++ ++|++.+++|+..++...++.. .+
T Consensus 34 p~ld~fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~--~~~leiar~~~~~~g~~~~v~~---~d 106 (200)
T 3fzg_A 34 ATLNDFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDID--RAEIAFLSSIIGKLKTTIKYRF---LN 106 (200)
T ss_dssp GGHHHHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSC--HHHHHHHHHHHHHSCCSSEEEE---EC
T ss_pred HhHHHHHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCC--HHHHHHHHHHHHhcCCCccEEE---ec
Confidence 44444444444443 24569999999999999999886 5699999999 5799999999999998755443 23
Q ss_pred CCcCCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 131 LDASIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 131 ~~~~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
......+.+||+|++..+++...+.+..+..+.+.|+|+
T Consensus 107 ~~~~~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pg 145 (200)
T 3fzg_A 107 KESDVYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQ 145 (200)
T ss_dssp CHHHHTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEE
T ss_pred ccccCCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCC
Confidence 333345568999999999999877777777999999885
No 72
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.49 E-value=9.7e-15 Score=112.46 Aligned_cols=114 Identities=14% Similarity=0.106 Sum_probs=85.1
Q ss_pred eeecchHH--HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhC-CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEE
Q 030935 49 LFVWPCSV--ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVG-SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMG 125 (169)
Q Consensus 49 ~~~W~~~~--~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g-a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~ 125 (169)
+.-|+..+ .+++.+ ..+|.+|||||||+|..+..+++.+ ++|+++|++ +.+++.++++.+..+..+++..
T Consensus 42 m~~we~~~m~~~a~~~-----~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~--~~~~~~a~~~~~~~~~~~~~~~ 114 (236)
T 3orh_A 42 MERWETPYMHALAAAA-----SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECN--DGVFQRLRDWAPRQTHKVIPLK 114 (236)
T ss_dssp EEGGGHHHHHHHHHHH-----TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECC--HHHHHHHHHHGGGCSSEEEEEE
T ss_pred HHHHHHHHHHHHHHhh-----ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCC--HHHHHHHHHHHhhCCCceEEEe
Confidence 34587542 333333 2367899999999999999998865 589999999 6799999999988887777665
Q ss_pred EEcCCCCcCCCCCCCcEEEE-----cCcCCCCCChHHHHHHHHHhccCC
Q 030935 126 LTWGFLDASIFDLNPNIILG-----ADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 126 l~~~~~~~~~~~~~fDlIi~-----sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.+|.+......+.+||.|+. ....++..+.+.+++.+++.||||
T Consensus 115 ~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG 163 (236)
T 3orh_A 115 GLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG 163 (236)
T ss_dssp SCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE
T ss_pred ehHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCC
Confidence 66655444455668999974 223345566788999999999996
No 73
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.49 E-value=1.1e-13 Score=107.87 Aligned_cols=109 Identities=12% Similarity=-0.089 Sum_probs=78.8
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHH------------------h
Q 030935 56 VILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEM------------------N 117 (169)
Q Consensus 56 ~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~------------------n 117 (169)
..+.+|+.......++.+|||+|||+|..+..+++.|.+|+++|++ +.|++.++++... .
T Consensus 54 ~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S--~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (252)
T 2gb4_A 54 QLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEIS--EIGIREFFAEQNLSYTEEPLAEIAGAKVFKSS 131 (252)
T ss_dssp HHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSC--HHHHHHHHHHTTCCEEEEECTTSTTCEEEEET
T ss_pred HHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECC--HHHHHHHHHhcccccccccccccccccccccC
Confidence 3566666543322367899999999999999999999999999999 5699998765531 1
Q ss_pred CCcceEEEEEcCCCCcCCCC--CCCcEEEEcCcCCCCC--ChHHHHHHHHHhccCC
Q 030935 118 KLNCRVMGLTWGFLDASIFD--LNPNIILGADVFYDAS--GKICAFEILICSLFPI 169 (169)
Q Consensus 118 ~~~~~~~~l~~~~~~~~~~~--~~fDlIi~sd~iy~~~--~~~~l~~~l~~~L~p~ 169 (169)
+.+++ +..++....... .+||+|++..++++.. ..+.+++.+.+.|+||
T Consensus 132 ~~~i~---~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG 184 (252)
T 2gb4_A 132 SGSIS---LYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE 184 (252)
T ss_dssp TSSEE---EEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE
T ss_pred CCceE---EEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC
Confidence 12233 334454332222 6899999988887654 4567899999999995
No 74
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.49 E-value=1.1e-13 Score=103.61 Aligned_cols=123 Identities=15% Similarity=0.029 Sum_probs=89.3
Q ss_pred ceEEEEeccccCCcceeecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHH
Q 030935 34 SFSIAIIENMKEEYGLFVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRR 112 (169)
Q Consensus 34 ~~~i~i~~~~~~~~g~~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~ 112 (169)
...+.+.+.+.... ..++....+.+++.... .++.+|||+|||+|..++.+++.+. +|+++|++ +.+++.+++
T Consensus 28 ~~~~~~~~~~~f~~--~~~~~~~~~~~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s--~~~~~~a~~ 101 (205)
T 3grz_A 28 QEIIRLDPGLAFGT--GNHQTTQLAMLGIERAM--VKPLTVADVGTGSGILAIAAHKLGAKSVLATDIS--DESMTAAEE 101 (205)
T ss_dssp CEEEEESCC-------CCHHHHHHHHHHHHHHC--SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESC--HHHHHHHHH
T ss_pred ceeEEecCCcccCC--CCCccHHHHHHHHHHhc--cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECC--HHHHHHHHH
Confidence 44455544443333 35688888888887653 2678999999999999999999876 89999999 569999999
Q ss_pred HHHHhCCc-ceEEEEEcCCCCcCCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 113 VCEMNKLN-CRVMGLTWGFLDASIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 113 n~~~n~~~-~~~~~l~~~~~~~~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
|+..++.. +++. .++... ..+.+||+|+++.++.+ +..+++.+.+.|+|+
T Consensus 102 ~~~~~~~~~v~~~---~~d~~~-~~~~~fD~i~~~~~~~~---~~~~l~~~~~~L~~g 152 (205)
T 3grz_A 102 NAALNGIYDIALQ---KTSLLA-DVDGKFDLIVANILAEI---LLDLIPQLDSHLNED 152 (205)
T ss_dssp HHHHTTCCCCEEE---ESSTTT-TCCSCEEEEEEESCHHH---HHHHGGGSGGGEEEE
T ss_pred HHHHcCCCceEEE---eccccc-cCCCCceEEEECCcHHH---HHHHHHHHHHhcCCC
Confidence 99988876 4433 334322 23469999999866543 577788888888874
No 75
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.48 E-value=3.1e-13 Score=101.36 Aligned_cols=103 Identities=14% Similarity=0.023 Sum_probs=77.1
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCC-
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASI- 135 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~- 135 (169)
.+...+.+.....++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.+++|++.++.. ++ .+..++.....
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~-~v-~~~~~d~~~~~~ 139 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERI--KGLQWQARRRLKNLDLH-NV-STRHGDGWQGWQ 139 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESC--HHHHHHHHHHHHHTTCC-SE-EEEESCGGGCCG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecC--HHHHHHHHHHHHHcCCC-ce-EEEECCcccCCc
Confidence 344444444455678899999999999999999998899999999 57999999999988765 22 23334433322
Q ss_pred CCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 136 FDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 136 ~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
...+||+|++..++++... .+.+.|+|+
T Consensus 140 ~~~~~D~i~~~~~~~~~~~------~~~~~L~pg 167 (210)
T 3lbf_A 140 ARAPFDAIIVTAAPPEIPT------ALMTQLDEG 167 (210)
T ss_dssp GGCCEEEEEESSBCSSCCT------HHHHTEEEE
T ss_pred cCCCccEEEEccchhhhhH------HHHHhcccC
Confidence 2458999999988877653 577788874
No 76
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.48 E-value=1.6e-13 Score=102.88 Aligned_cols=93 Identities=18% Similarity=0.072 Sum_probs=74.3
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhC-CcceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNK-LNCRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~-~~~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
..++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.+++ ++ .++.+. .++......+.+||+|+++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s--~~~~~~a~~----~~~~~~~~~---~~d~~~~~~~~~~D~v~~~ 114 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLADRVTALDGS--AEMIAEAGR----HGLDNVEFR---QQDLFDWTPDRQWDAVFFA 114 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESC--HHHHHHHGG----GCCTTEEEE---ECCTTSCCCSSCEEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCC--HHHHHHHHh----cCCCCeEEE---ecccccCCCCCceeEEEEe
Confidence 3456799999999999999999999999999999 569998887 33 233333 3443333445699999999
Q ss_pred CcCCCCCCh--HHHHHHHHHhccCC
Q 030935 147 DVFYDASGK--ICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~~~--~~l~~~l~~~L~p~ 169 (169)
.++++.... ..+++.+.+.|+|+
T Consensus 115 ~~l~~~~~~~~~~~l~~~~~~L~pg 139 (218)
T 3ou2_A 115 HWLAHVPDDRFEAFWESVRSAVAPG 139 (218)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCC
Confidence 999998874 89999999999985
No 77
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.48 E-value=2.5e-13 Score=105.74 Aligned_cols=107 Identities=16% Similarity=0.078 Sum_probs=79.9
Q ss_pred HHhccCCCCCCeEEEECCCCCHHHHHHHHh-C--CeEEEEcCCCc----HHHHHHHHHHHHHhCCcceEEEEEcCC-C--
Q 030935 62 VWQQRYRFSGANVVELGAGTSLPGLVAAKV-G--SNVTLTDDSNR----IEVLKNMRRVCEMNKLNCRVMGLTWGF-L-- 131 (169)
Q Consensus 62 l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-g--a~V~~~D~~~~----~~~l~~~~~n~~~n~~~~~~~~l~~~~-~-- 131 (169)
+.......++.+|||+|||+|..+..+++. | .+|+++|+++. +.+++.+++++..+++..++. +..++ .
T Consensus 35 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~ 113 (275)
T 3bkx_A 35 IAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLT-VHFNTNLSD 113 (275)
T ss_dssp HHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEE-EECSCCTTT
T ss_pred HHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceE-EEECChhhh
Confidence 333334557889999999999999999987 4 69999999951 128999999998877643333 22332 2
Q ss_pred -CcCCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 132 -DASIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 132 -~~~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
..+..+.+||+|++..++++..+.+.+++.+..+++|+
T Consensus 114 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~g 152 (275)
T 3bkx_A 114 DLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVC 152 (275)
T ss_dssp CCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTC
T ss_pred ccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCC
Confidence 11223468999999999999999988888888888765
No 78
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.48 E-value=7.5e-15 Score=109.73 Aligned_cols=112 Identities=18% Similarity=0.049 Sum_probs=65.7
Q ss_pred chHHHHHHHHHhccCC-CCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcC
Q 030935 53 PCSVILAEYVWQQRYR-FSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWG 129 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~-~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~ 129 (169)
|.+..+.+++...... .++.+|||+|||+|..++.+++.+ .+|+++|+++ .+++.+++|+..++.++++ ..+
T Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~~---~~~ 86 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSM--DALAVARRNAERFGAVVDW---AAA 86 (215)
T ss_dssp HHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------C---CHH
T ss_pred ccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCH--HHHHHHHHHHHHhCCceEE---EEc
Confidence 4466677777665433 567899999999999999999984 4999999995 5999999999887763322 223
Q ss_pred CCCcCCCC-----CCCcEEEEcCcCCCCCCh--------------------------HHHHHHHHHhccCC
Q 030935 130 FLDASIFD-----LNPNIILGADVFYDASGK--------------------------ICAFEILICSLFPI 169 (169)
Q Consensus 130 ~~~~~~~~-----~~fDlIi~sd~iy~~~~~--------------------------~~l~~~l~~~L~p~ 169 (169)
+....... .+||+|+++.+++..... ..+++.+.+.|+|+
T Consensus 87 d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 157 (215)
T 4dzr_A 87 DGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARG 157 (215)
T ss_dssp HHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSS
T ss_pred chHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCC
Confidence 32222222 699999997776544332 67788888899886
No 79
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.48 E-value=3.6e-13 Score=98.11 Aligned_cols=104 Identities=14% Similarity=0.022 Sum_probs=80.0
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcCCC
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWGFL 131 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~~~ 131 (169)
+....+..++.......++.+|||+|||+|.+++.+++.+.+|+++|++ +.+++.+++|++.+++. +.+ ..++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~---~~~d~ 92 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYL--DGAIEVTKQNLAKFNIKNCQI---IKGRA 92 (183)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECS--HHHHHHHHHHHHHTTCCSEEE---EESCH
T ss_pred cCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCC--HHHHHHHHHHHHHcCCCcEEE---EECCc
Confidence 4445566666665555678899999999999999999977799999999 57999999999988863 333 33443
Q ss_pred CcCCCCCCCcEEEEcCcCCCCCChHHHHHHHHHh
Q 030935 132 DASIFDLNPNIILGADVFYDASGKICAFEILICS 165 (169)
Q Consensus 132 ~~~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~ 165 (169)
.......+||+|+++.+ ...+.+++.+.+.
T Consensus 93 ~~~~~~~~~D~i~~~~~----~~~~~~l~~~~~~ 122 (183)
T 2yxd_A 93 EDVLDKLEFNKAFIGGT----KNIEKIIEILDKK 122 (183)
T ss_dssp HHHGGGCCCSEEEECSC----SCHHHHHHHHHHT
T ss_pred cccccCCCCcEEEECCc----ccHHHHHHHHhhC
Confidence 33333358999999988 7788888888876
No 80
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.48 E-value=1.8e-13 Score=100.33 Aligned_cols=110 Identities=15% Similarity=0.005 Sum_probs=82.7
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA 133 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~ 133 (169)
....+..++.......++.+|||+|||+|..++.+++.+.+|+++|++ +.+++.+++|+..++...++. +..++...
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~--~~~~~~a~~~~~~~~~~~~~~-~~~~d~~~ 93 (192)
T 1l3i_A 17 TAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRN--PEAISTTEMNLQRHGLGDNVT-LMEGDAPE 93 (192)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESC--HHHHHHHHHHHHHTTCCTTEE-EEESCHHH
T ss_pred ChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECC--HHHHHHHHHHHHHcCCCcceE-EEecCHHH
Confidence 444555666655556678899999999999999999988899999999 569999999999887732222 22233222
Q ss_pred CCCC-CCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 134 SIFD-LNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 134 ~~~~-~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.... .+||+|+++.++. .+..+++.+.+.|+|+
T Consensus 94 ~~~~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~g 127 (192)
T 1l3i_A 94 ALCKIPDIDIAVVGGSGG---ELQEILRIIKDKLKPG 127 (192)
T ss_dssp HHTTSCCEEEEEESCCTT---CHHHHHHHHHHTEEEE
T ss_pred hcccCCCCCEEEECCchH---HHHHHHHHHHHhcCCC
Confidence 2222 4899999987764 5689999999999985
No 81
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.48 E-value=2.2e-13 Score=104.78 Aligned_cols=96 Identities=21% Similarity=0.121 Sum_probs=75.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcC-
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGAD- 147 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd- 147 (169)
.++.+|||+|||+|..++.+++.|.+|+++|++ +.+++.+++++..++.++.+...+..+ ...+.+||+|++..
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~v~~~~~d~~~---~~~~~~fD~v~~~~~ 114 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGYEVVGLDLH--EEMLRVARRKAKERNLKIEFLQGDVLE---IAFKNEFDAVTMFFS 114 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCCEEEESCGGG---CCCCSCEEEEEECSS
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECC--HHHHHHHHHHHHhcCCceEEEECChhh---cccCCCccEEEEcCC
Confidence 456799999999999999999999999999999 579999999998887765554433332 22345899999753
Q ss_pred cCC--CCCChHHHHHHHHHhccCC
Q 030935 148 VFY--DASGKICAFEILICSLFPI 169 (169)
Q Consensus 148 ~iy--~~~~~~~l~~~l~~~L~p~ 169 (169)
.++ +......+++.+.+.|+|+
T Consensus 115 ~~~~~~~~~~~~~l~~~~~~L~pg 138 (252)
T 1wzn_A 115 TIMYFDEEDLRKLFSKVAEALKPG 138 (252)
T ss_dssp GGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred chhcCCHHHHHHHHHHHHHHcCCC
Confidence 222 2346788999999999985
No 82
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.47 E-value=2.7e-13 Score=105.85 Aligned_cols=111 Identities=19% Similarity=0.148 Sum_probs=81.9
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHH---hCCc--ceEEE
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEM---NKLN--CRVMG 125 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~---n~~~--~~~~~ 125 (169)
-.+.+|+.|+. ..++.+|||+|||+|.+++.+++.. .+|+++|++ +.+++.+++|+.. +++. +.+..
T Consensus 23 ~D~~lL~~~~~----~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~--~~~~~~a~~n~~~~~~~~l~~~v~~~~ 96 (260)
T 2ozv_A 23 MDAMLLASLVA----DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERS--QEMAEFARRSLELPDNAAFSARIEVLE 96 (260)
T ss_dssp CHHHHHHHTCC----CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESS--HHHHHHHHHHTTSGGGTTTGGGEEEEE
T ss_pred cHHHHHHHHhc----ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECC--HHHHHHHHHHHHhhhhCCCcceEEEEe
Confidence 57888888763 3356799999999999999999985 489999999 5799999999998 8776 33333
Q ss_pred EEcCCCCc-----CCCCCCCcEEEEcCcCCCC------------------CChHHHHHHHHHhccCC
Q 030935 126 LTWGFLDA-----SIFDLNPNIILGADVFYDA------------------SGKICAFEILICSLFPI 169 (169)
Q Consensus 126 l~~~~~~~-----~~~~~~fDlIi~sd~iy~~------------------~~~~~l~~~l~~~L~p~ 169 (169)
.++.+... ...+.+||+|+++.+++.. ..++.+++.+.+.|+|+
T Consensus 97 ~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg 163 (260)
T 2ozv_A 97 ADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSG 163 (260)
T ss_dssp CCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEE
T ss_pred CCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCC
Confidence 33332210 1234689999998666543 24788999999999985
No 83
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.47 E-value=4.2e-14 Score=102.70 Aligned_cols=90 Identities=17% Similarity=0.076 Sum_probs=74.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCc
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADV 148 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~ 148 (169)
.++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++ ...+++. .++ .+..+.+||+|+++.+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~----~~~v~~~---~~d--~~~~~~~~D~v~~~~~ 84 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFATKLYCIDIN--VIALKEVKEK----FDSVITL---SDP--KEIPDNSVDFILFANS 84 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEEEEEEECSC--HHHHHHHHHH----CTTSEEE---SSG--GGSCTTCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCC--HHHHHHHHHh----CCCcEEE---eCC--CCCCCCceEEEEEccc
Confidence 367799999999999999999987799999999 5699999887 2223322 233 3344568999999999
Q ss_pred CCCCCChHHHHHHHHHhccCC
Q 030935 149 FYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 149 iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+++..+...+++.+.+.|+|+
T Consensus 85 l~~~~~~~~~l~~~~~~L~pg 105 (170)
T 3i9f_A 85 FHDMDDKQHVISEVKRILKDD 105 (170)
T ss_dssp STTCSCHHHHHHHHHHHEEEE
T ss_pred hhcccCHHHHHHHHHHhcCCC
Confidence 999999999999999999985
No 84
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=8.4e-14 Score=109.06 Aligned_cols=93 Identities=15% Similarity=0.092 Sum_probs=75.8
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcC
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGAD 147 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd 147 (169)
..++.+|||+|||+|..+..+++.+.+|+++|++ +.|++.++++. ..+.+...+.... ..+.+||+|+++.
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~~a~~~~----~~~~~~~~d~~~~---~~~~~fD~v~~~~ 125 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNA--ATMIEKARQNY----PHLHFDVADARNF---RVDKPLDAVFSNA 125 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHHHC----TTSCEEECCTTTC---CCSSCEEEEEEES
T ss_pred CCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECC--HHHHHHHHhhC----CCCEEEECChhhC---CcCCCcCEEEEcc
Confidence 3467899999999999999999988899999999 56999988765 2234443333332 2346899999999
Q ss_pred cCCCCCChHHHHHHHHHhccCC
Q 030935 148 VFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 148 ~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
++++..+.+.+++.+.+.|+|+
T Consensus 126 ~l~~~~d~~~~l~~~~~~Lkpg 147 (279)
T 3ccf_A 126 MLHWVKEPEAAIASIHQALKSG 147 (279)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEE
T ss_pred hhhhCcCHHHHHHHHHHhcCCC
Confidence 9999999999999999999985
No 85
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.47 E-value=5.2e-13 Score=108.37 Aligned_cols=108 Identities=17% Similarity=0.251 Sum_probs=81.0
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF 136 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~ 136 (169)
..+.+.+.....++++|||+|||+|.+++.+++.|+ +|+++|.++ +++.++++++.+++..++. +..++......
T Consensus 38 y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~---~~~~a~~~~~~~~l~~~v~-~~~~d~~~~~~ 113 (348)
T 2y1w_A 38 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST---MAQHAEVLVKSNNLTDRIV-VIPGKVEEVSL 113 (348)
T ss_dssp HHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST---HHHHHHHHHHHTTCTTTEE-EEESCTTTCCC
T ss_pred HHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH---HHHHHHHHHHHcCCCCcEE-EEEcchhhCCC
Confidence 344555555556889999999999999999999886 999999994 7899999999988753333 23344333223
Q ss_pred CCCCcEEEEcCcCCCC--CChHHHHHHHHHhccCC
Q 030935 137 DLNPNIILGADVFYDA--SGKICAFEILICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~~--~~~~~l~~~l~~~L~p~ 169 (169)
+.+||+|++..+.|+. +.....+..+.+.|+|+
T Consensus 114 ~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~Lkpg 148 (348)
T 2y1w_A 114 PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPS 148 (348)
T ss_dssp SSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEE
T ss_pred CCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCC
Confidence 4589999998887754 45567777888999885
No 86
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.47 E-value=3.6e-13 Score=108.87 Aligned_cols=97 Identities=21% Similarity=0.090 Sum_probs=75.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcc-eEEEEEcCCCCcCCC-----CCCCcEE
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNC-RVMGLTWGFLDASIF-----DLNPNII 143 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~-~~~~l~~~~~~~~~~-----~~~fDlI 143 (169)
++.+|||+|||+|.+++.+++.|++|+++|++ +.+++.+++|++.|++.. ++. +..++...... ..+||+|
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s--~~al~~a~~n~~~~gl~~~~v~-~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDAS--KKAIGWAKENQVLAGLEQAPIR-WICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSC--HHHHHHHHHHHHHHTCTTSCEE-EECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHHcCCCccceE-EEECcHHHHHHHHHhcCCCceEE
Confidence 56799999999999999999999999999999 579999999999998763 222 44444332211 3589999
Q ss_pred EEcCcCCCC----------CChHHHHHHHHHhccCC
Q 030935 144 LGADVFYDA----------SGKICAFEILICSLFPI 169 (169)
Q Consensus 144 i~sd~iy~~----------~~~~~l~~~l~~~L~p~ 169 (169)
++..+.|.. ..+..+++.+.+.|+|+
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~Lkpg 265 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPK 265 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTT
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcC
Confidence 986554432 23678899999999986
No 87
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.47 E-value=9.4e-13 Score=99.33 Aligned_cols=98 Identities=13% Similarity=-0.130 Sum_probs=73.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
++.+|||||||+|.+++.+++.. .+|+++|++ +.+++.+++|+..+++. +.+...++.+......+.+||+|++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s--~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQ--KSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESC--HHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcC--HHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 46799999999999999999874 599999999 57999999999988873 44443333332112335589999988
Q ss_pred CcCCCCC--------ChHHHHHHHHHhccCC
Q 030935 147 DVFYDAS--------GKICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~--------~~~~l~~~l~~~L~p~ 169 (169)
.+..+.. ..+.+++.+.+.|+|+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 149 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPEN 149 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTT
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCC
Confidence 5533222 3468999999999996
No 88
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.46 E-value=1.6e-13 Score=105.21 Aligned_cols=95 Identities=13% Similarity=-0.085 Sum_probs=74.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhC-CcceEEEEEcCCCCc-CCCCCCCcEEEEc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNK-LNCRVMGLTWGFLDA-SIFDLNPNIILGA 146 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~-~~~~~~~l~~~~~~~-~~~~~~fDlIi~s 146 (169)
++.+|||+|||+|..+..+++.+. +|+++|++ +.+++.+++++..++ ..+.+. .++... ...+.+||+|++.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~---~~d~~~~~~~~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDIT--EDFLVQAKTYLGEEGKRVRNYF---CCGLQDFTPEPDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESC--HHHHHHHHHHTGGGGGGEEEEE---ECCGGGCCCCSSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCC--HHHHHHHHHHhhhcCCceEEEE---EcChhhcCCCCCCEEEEEEc
Confidence 578999999999999999888755 89999999 569999999987663 223333 333322 2233489999999
Q ss_pred CcCCCCCC--hHHHHHHHHHhccCC
Q 030935 147 DVFYDASG--KICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~~--~~~l~~~l~~~L~p~ 169 (169)
.++++..+ +..+++.+.+.|+|+
T Consensus 154 ~~l~~~~~~~~~~~l~~~~~~Lkpg 178 (241)
T 2ex4_A 154 WVIGHLTDQHLAEFLRRCKGSLRPN 178 (241)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCC
Confidence 99998877 558999999999985
No 89
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.46 E-value=2.2e-13 Score=104.62 Aligned_cols=101 Identities=10% Similarity=-0.023 Sum_probs=77.2
Q ss_pred HhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-CCCCCCC
Q 030935 63 WQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-SIFDLNP 140 (169)
Q Consensus 63 ~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~~~~~~f 140 (169)
.......++.+|||+|||+|.++..+++.+. +|+++|++ +.+++.+++++..+ ..+.+. .++... +..+.+|
T Consensus 86 l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s--~~~~~~a~~~~~~~-~~~~~~---~~d~~~~~~~~~~f 159 (254)
T 1xtp_A 86 IASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPV--KHMLEEAKRELAGM-PVGKFI---LASMETATLPPNTY 159 (254)
T ss_dssp HHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESC--HHHHHHHHHHTTTS-SEEEEE---ESCGGGCCCCSSCE
T ss_pred HHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCC--HHHHHHHHHHhccC-CceEEE---EccHHHCCCCCCCe
Confidence 3333444678999999999999999888755 79999999 56999999887654 223333 333322 2334589
Q ss_pred cEEEEcCcCCCC--CChHHHHHHHHHhccCC
Q 030935 141 NIILGADVFYDA--SGKICAFEILICSLFPI 169 (169)
Q Consensus 141 DlIi~sd~iy~~--~~~~~l~~~l~~~L~p~ 169 (169)
|+|+++.++++. .+...+++.+.+.|+|+
T Consensus 160 D~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 190 (254)
T 1xtp_A 160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPN 190 (254)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred EEEEEcchhhhCCHHHHHHHHHHHHHhcCCC
Confidence 999999999988 45889999999999985
No 90
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.46 E-value=5.9e-14 Score=113.64 Aligned_cols=105 Identities=14% Similarity=0.123 Sum_probs=80.9
Q ss_pred HHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC
Q 030935 59 AEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF 136 (169)
Q Consensus 59 a~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~ 136 (169)
++++.+......+.+|||+|||+|.+++.+++.+ .+|+++|++ +.+++.+++|+..+++..++ .+++.... .
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s--~~~l~~a~~~~~~~~~~~~~---~~~d~~~~-~ 258 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVS--APAVEASRATLAANGVEGEV---FASNVFSE-V 258 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESB--HHHHHHHHHHHHHTTCCCEE---EECSTTTT-C
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHhCCCCEE---EEcccccc-c
Confidence 3444443323346799999999999999999987 489999999 56999999999999887554 34444332 3
Q ss_pred CCCCcEEEEcCcCCC-----CCChHHHHHHHHHhccCC
Q 030935 137 DLNPNIILGADVFYD-----ASGKICAFEILICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~-----~~~~~~l~~~l~~~L~p~ 169 (169)
+.+||+|+++.++++ ......+++.+.+.|+|+
T Consensus 259 ~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lkpg 296 (343)
T 2pjd_A 259 KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSG 296 (343)
T ss_dssp CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEE
T ss_pred cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCC
Confidence 568999999988774 345678999999999985
No 91
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.46 E-value=1.9e-13 Score=105.98 Aligned_cols=102 Identities=15% Similarity=0.024 Sum_probs=77.6
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF 136 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~ 136 (169)
.+.+++.... .++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++.. .+.+... +......
T Consensus 39 ~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~~a~~~~~----~~~~~~~---d~~~~~~ 107 (263)
T 3pfg_A 39 DLAALVRRHS--PKAASLLDVACGTGMHLRHLADSFGTVEGLELS--ADMLAIARRRNP----DAVLHHG---DMRDFSL 107 (263)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHTTTSSEEEEEESC--HHHHHHHHHHCT----TSEEEEC---CTTTCCC
T ss_pred HHHHHHHhhC--CCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECC--HHHHHHHHhhCC----CCEEEEC---ChHHCCc
Confidence 4445554443 256799999999999999999999999999999 569999988754 3344333 3322223
Q ss_pred CCCCcEEEEcC-cCCCCC---ChHHHHHHHHHhccCC
Q 030935 137 DLNPNIILGAD-VFYDAS---GKICAFEILICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~sd-~iy~~~---~~~~l~~~l~~~L~p~ 169 (169)
+.+||+|+++. ++++.. ....+++.+.+.|+|+
T Consensus 108 ~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pg 144 (263)
T 3pfg_A 108 GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPD 144 (263)
T ss_dssp SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEE
T ss_pred cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCC
Confidence 56999999997 998874 6678899999999985
No 92
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.46 E-value=2.4e-13 Score=111.58 Aligned_cols=100 Identities=23% Similarity=0.216 Sum_probs=78.8
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHh-----C----CcceEEEEEcCCCCc--
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMN-----K----LNCRVMGLTWGFLDA-- 133 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n-----~----~~~~~~~l~~~~~~~-- 133 (169)
..++.+|||+|||+|..++.+++. +.+|+++|++ +.+++.+++|++.+ + .++++...++.+...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~ 158 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDML--DNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAE 158 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECC--HHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCB
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcc
Confidence 347789999999999999998875 4499999999 57999999998765 3 234433333332211
Q ss_pred --CCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 134 --SIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 134 --~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+..+.+||+|+++.++++..+...+++.+.+.|+|+
T Consensus 159 ~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg 196 (383)
T 4fsd_A 159 PEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDG 196 (383)
T ss_dssp SCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE
T ss_pred cCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCC
Confidence 344569999999999999999999999999999985
No 93
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.46 E-value=1.3e-13 Score=103.79 Aligned_cols=92 Identities=15% Similarity=0.102 Sum_probs=72.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-C-CCCCCCcEEEEcC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-S-IFDLNPNIILGAD 147 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~-~~~~~fDlIi~sd 147 (169)
++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++ ....+...+..+... . ....+||+|+++.
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGIEAVGVDGD--RTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTCEEEEEESC--HHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCC--HHHHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEECc
Confidence 56899999999999999999999999999999 5699998877 223333333333211 1 2234699999999
Q ss_pred cCCCCCChHHHHHHHHHhccCC
Q 030935 148 VFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 148 ~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+++ ..+...+++.+.+.|+|+
T Consensus 125 ~l~-~~~~~~~l~~~~~~L~pg 145 (227)
T 3e8s_A 125 ALL-HQDIIELLSAMRTLLVPG 145 (227)
T ss_dssp CCC-SSCCHHHHHHHHHTEEEE
T ss_pred hhh-hhhHHHHHHHHHHHhCCC
Confidence 999 889999999999999985
No 94
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.46 E-value=3.5e-14 Score=108.80 Aligned_cols=98 Identities=13% Similarity=0.055 Sum_probs=72.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEE-cC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILG-AD 147 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~-sd 147 (169)
++.+|||+|||+|..+..+++.+. +|+++|++ +.|++.++++.+.++.++.+...++.+...++.+.+||+|++ .-
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECN--DGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECC--HHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCC--HHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 567999999999999999988766 89999999 579999999988776555444333333222344568999998 33
Q ss_pred cCC----CCCChHHHHHHHHHhccCC
Q 030935 148 VFY----DASGKICAFEILICSLFPI 169 (169)
Q Consensus 148 ~iy----~~~~~~~l~~~l~~~L~p~ 169 (169)
.+. +....+.+++.+++.|||+
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~Lkpg 163 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPG 163 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEE
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCC
Confidence 321 2223446799999999985
No 95
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.46 E-value=2.8e-13 Score=104.68 Aligned_cols=96 Identities=13% Similarity=0.108 Sum_probs=65.1
Q ss_pred HHHHHHHHHhccCC--CCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCc--ceEEEEEc
Q 030935 55 SVILAEYVWQQRYR--FSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLN--CRVMGLTW 128 (169)
Q Consensus 55 ~~~La~~l~~~~~~--~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~--~~~~~l~~ 128 (169)
...+...+...... .++.+|||+|||+|.+++.+++. +++|+++|++ +.+++.+++|++.+++. +++...+.
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (254)
T 2h00_A 48 YIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVD--DMCFNYAKKNVEQNNLSDLIKVVKVPQ 125 (254)
T ss_dssp HHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECC--HHHHHHHHHHHHHcCCCccEEEEEcch
Confidence 44444444433221 25679999999999999888875 6799999999 57999999999998876 33333332
Q ss_pred CC-CCcCCC---CCCCcEEEEcCcCCCC
Q 030935 129 GF-LDASIF---DLNPNIILGADVFYDA 152 (169)
Q Consensus 129 ~~-~~~~~~---~~~fDlIi~sd~iy~~ 152 (169)
.+ ...... +.+||+|+++.+.+..
T Consensus 126 ~~~~~~~~~~~~~~~fD~i~~npp~~~~ 153 (254)
T 2h00_A 126 KTLLMDALKEESEIIYDFCMCNPPFFAN 153 (254)
T ss_dssp TCSSTTTSTTCCSCCBSEEEECCCCC--
T ss_pred hhhhhhhhhcccCCcccEEEECCCCccC
Confidence 22 122222 2489999998776643
No 96
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.45 E-value=1.6e-14 Score=112.66 Aligned_cols=101 Identities=15% Similarity=0.067 Sum_probs=73.5
Q ss_pred CCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCc-------------------------
Q 030935 67 YRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLN------------------------- 120 (169)
Q Consensus 67 ~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~------------------------- 120 (169)
...++.+|||||||+|+.++.+++.++ +|+++|++ +.|++.++++++.+...
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s--~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFT--DRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESC--HHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeecccc--HHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 345788999999999999888888887 79999999 56999999887654210
Q ss_pred ---ceEEEEEcCCCCc--C---CCCCCCcEEEEcCcCCCC----CChHHHHHHHHHhccCC
Q 030935 121 ---CRVMGLTWGFLDA--S---IFDLNPNIILGADVFYDA----SGKICAFEILICSLFPI 169 (169)
Q Consensus 121 ---~~~~~l~~~~~~~--~---~~~~~fDlIi~sd~iy~~----~~~~~l~~~l~~~L~p~ 169 (169)
..+..+..++... + ....+||+|+++-++++. .++..+++.+.++||||
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPG 190 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPG 190 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEE
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCC
Confidence 0122123333332 1 123589999999998763 45568899999999996
No 97
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.45 E-value=6.6e-14 Score=110.89 Aligned_cols=99 Identities=17% Similarity=0.093 Sum_probs=72.1
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCc-------------------------
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLN------------------------- 120 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~------------------------- 120 (169)
.+++++|||+|||+|.+++.+++. +.+|+++|++ +.+++.+++++..++..
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis--~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDID--SRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVR 121 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESC--HHHHHHHHHTC-------------------------------
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCC--HHHHHHHHHHHHhhhhhhcccccccccccccccccccccccc
Confidence 357889999999999999999987 5699999999 56999999987654311
Q ss_pred --------------------------------ceEEEEEcCCCCcC------CCCCCCcEEEEcCcCCCC------CChH
Q 030935 121 --------------------------------CRVMGLTWGFLDAS------IFDLNPNIILGADVFYDA------SGKI 156 (169)
Q Consensus 121 --------------------------------~~~~~l~~~~~~~~------~~~~~fDlIi~sd~iy~~------~~~~ 156 (169)
.++ .+..++.... ....+||+|+|..++.+. ....
T Consensus 122 ~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v-~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~ 200 (292)
T 3g07_A 122 KRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNV-VFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLK 200 (292)
T ss_dssp --------------------CCSSTTCCSSTTTTE-EEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHH
T ss_pred ccccccchhhhccCccccccccccccccccccccc-eEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHH
Confidence 111 1233333221 235699999999998544 3788
Q ss_pred HHHHHHHHhccCC
Q 030935 157 CAFEILICSLFPI 169 (169)
Q Consensus 157 ~l~~~l~~~L~p~ 169 (169)
.+++.+.+.|+||
T Consensus 201 ~~l~~~~~~LkpG 213 (292)
T 3g07_A 201 RMFRRIYRHLRPG 213 (292)
T ss_dssp HHHHHHHHHEEEE
T ss_pred HHHHHHHHHhCCC
Confidence 8999999999985
No 98
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.45 E-value=2.5e-13 Score=105.54 Aligned_cols=95 Identities=20% Similarity=0.139 Sum_probs=72.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcCCCCcC-CCCCCCcEEE
Q 030935 69 FSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWGFLDAS-IFDLNPNIIL 144 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~~~~~~-~~~~~fDlIi 144 (169)
.++.+|||+|||+|.+++.++.. +.+|+++|++ +.+++.+++|++.+++. +++...+..+.... ....+||+|+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDAT--RKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESC--HHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEE
Confidence 36789999999999999999986 4599999999 56999999999999885 33333322221111 1236899999
Q ss_pred EcCcCCCCCChHHHHHHHHHhccCC
Q 030935 145 GADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 145 ~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+..+ ..++.+++.+.+.|+|+
T Consensus 157 s~a~----~~~~~ll~~~~~~Lkpg 177 (249)
T 3g89_A 157 ARAV----APLCVLSELLLPFLEVG 177 (249)
T ss_dssp EESS----CCHHHHHHHHGGGEEEE
T ss_pred ECCc----CCHHHHHHHHHHHcCCC
Confidence 9643 56899999999999985
No 99
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.45 E-value=8.8e-13 Score=101.74 Aligned_cols=102 Identities=17% Similarity=0.067 Sum_probs=79.3
Q ss_pred HHHHhccCCCCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC
Q 030935 60 EYVWQQRYRFSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF 136 (169)
Q Consensus 60 ~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~ 136 (169)
.++.......++.+|||+|||+|..++.+++. +.+|+++|++ +.+++.+++|++.+++..++. +..++......
T Consensus 83 ~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~ 159 (255)
T 3mb5_A 83 ALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIR--EDFAKLAWENIKWAGFDDRVT-IKLKDIYEGIE 159 (255)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSC--HHHHHHHHHHHHHHTCTTTEE-EECSCGGGCCC
T ss_pred HHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecC--HHHHHHHHHHHHHcCCCCceE-EEECchhhccC
Confidence 34444445567889999999999999999987 5699999999 579999999999988764332 44455544455
Q ss_pred CCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 137 DLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+.+||+|++ +......+++.+.+.|+|+
T Consensus 160 ~~~~D~v~~-----~~~~~~~~l~~~~~~L~~g 187 (255)
T 3mb5_A 160 EENVDHVIL-----DLPQPERVVEHAAKALKPG 187 (255)
T ss_dssp CCSEEEEEE-----CSSCGGGGHHHHHHHEEEE
T ss_pred CCCcCEEEE-----CCCCHHHHHHHHHHHcCCC
Confidence 568999998 3456678899999999985
No 100
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.44 E-value=2.8e-13 Score=101.26 Aligned_cols=91 Identities=15% Similarity=0.119 Sum_probs=72.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 70 SGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
++.+|||+|||+|.+++.+++. +.+|+++|++ +.+++.+++|+..+++. +.+. .++........+||+|++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~v~~~---~~d~~~~~~~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSL--GKRVRFLRQVQHELKLENIEPV---QSRVEEFPSEPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESC--HHHHHHHHHHHHHTTCSSEEEE---ECCTTTSCCCSCEEEEECS
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCCeEEE---ecchhhCCccCCcCEEEEe
Confidence 5789999999999999999986 5699999999 57999999999988775 3433 3333322234589999975
Q ss_pred CcCCCCCChHHHHHHHHHhccCC
Q 030935 147 DVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.+ ..+..+++.+.+.|+|+
T Consensus 140 ~~----~~~~~~l~~~~~~L~~g 158 (207)
T 1jsx_A 140 AF----ASLNDMVSWCHHLPGEQ 158 (207)
T ss_dssp CS----SSHHHHHHHHTTSEEEE
T ss_pred cc----CCHHHHHHHHHHhcCCC
Confidence 43 56889999999999985
No 101
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.44 E-value=3.4e-13 Score=106.27 Aligned_cols=93 Identities=16% Similarity=-0.051 Sum_probs=74.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADV 148 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~ 148 (169)
++.+|||+|||+|.+++.+++.++ +|+++|++ +.+++.+++|++.|++...+. +..++........+||+|++..+
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s--~~~~~~a~~n~~~n~~~~~v~-~~~~D~~~~~~~~~fD~Vi~~~p 201 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKD--PYTFKFLVENIHLNKVEDRMS-AYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCC--HHHHHHHHHHHHHTTCTTTEE-EECSCTTTCCCCSCEEEEEECCC
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECC--HHHHHHHHHHHHHcCCCceEE-EEECCHHHhcccCCccEEEECCc
Confidence 578999999999999999999988 59999999 679999999999999874332 44455544334568999998533
Q ss_pred CCCCCChHHHHHHHHHhccCC
Q 030935 149 FYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 149 iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.....+++.+.+.|+|+
T Consensus 202 ----~~~~~~l~~~~~~Lkpg 218 (278)
T 2frn_A 202 ----VRTHEFIPKALSIAKDG 218 (278)
T ss_dssp ----SSGGGGHHHHHHHEEEE
T ss_pred ----hhHHHHHHHHHHHCCCC
Confidence 34467888888999885
No 102
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.44 E-value=2.7e-13 Score=106.34 Aligned_cols=98 Identities=16% Similarity=0.055 Sum_probs=77.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-CC-CCCCCcEEEE
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-SI-FDLNPNIILG 145 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~~-~~~~fDlIi~ 145 (169)
.++.+|||+|||+|..+..+++.+. +|+++|++ +.+++.+++++..++...++. +..++... +. .+.+||+|++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIA--EVSINDARVRARNMKRRFKVF-FRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESC--HHHHHHHHHHHHTSCCSSEEE-EEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHhcCCCccEE-EEECCccccccCCCCCcCEEEE
Confidence 3678999999999999998888887 99999999 569999999998776643332 33333322 22 3458999999
Q ss_pred cCcCCC----CCChHHHHHHHHHhccCC
Q 030935 146 ADVFYD----ASGKICAFEILICSLFPI 169 (169)
Q Consensus 146 sd~iy~----~~~~~~l~~~l~~~L~p~ 169 (169)
..++++ ..+...+++.+.+.|+|+
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~Lkpg 167 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPG 167 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEE
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCC
Confidence 999976 466788999999999985
No 103
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=3e-13 Score=103.66 Aligned_cols=113 Identities=12% Similarity=-0.086 Sum_probs=80.6
Q ss_pred ecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCC
Q 030935 51 VWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGF 130 (169)
Q Consensus 51 ~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~ 130 (169)
.|..+......+... ..++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++.... ++.+...+..+
T Consensus 39 ~~~~~~~~~~~~~~~--~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s--~~~~~~a~~~~~~~--~~~~~~~d~~~ 112 (245)
T 3ggd_A 39 VERAVVVDLPRFELL--FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVS--KSALEIAAKENTAA--NISYRLLDGLV 112 (245)
T ss_dssp GGGTHHHHHHHHTTT--SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESC--HHHHHHHHHHSCCT--TEEEEECCTTC
T ss_pred hHHHHHHHHHHHhhc--cCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECC--HHHHHHHHHhCccc--CceEEECcccc
Confidence 344444334444333 3467899999999999999999999999999999 56999999877322 33333332222
Q ss_pred CCcC-CC--CCCCcEEEEcCcCCCCC--ChHHHHHHHHHhccCC
Q 030935 131 LDAS-IF--DLNPNIILGADVFYDAS--GKICAFEILICSLFPI 169 (169)
Q Consensus 131 ~~~~-~~--~~~fDlIi~sd~iy~~~--~~~~l~~~l~~~L~p~ 169 (169)
.... .. ...||+|+++.++++.. +...+++.+.+.|+|+
T Consensus 113 ~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 156 (245)
T 3ggd_A 113 PEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQ 156 (245)
T ss_dssp HHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTT
T ss_pred cccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCC
Confidence 1100 00 12599999999999998 8899999999999996
No 104
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.43 E-value=4.9e-14 Score=121.25 Aligned_cols=85 Identities=19% Similarity=0.144 Sum_probs=67.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhC-CcceEEEEEcCCCCcCCCCCCCcEEEEcCc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNK-LNCRVMGLTWGFLDASIFDLNPNIILGADV 148 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~-~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~ 148 (169)
++.+|||+|||+|+++..+|++|++|+++|.+ +.+++.|+..+..++ +++++...+..+......+.+||+|+|..+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~--~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQ--QENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 56799999999999999999999999999999 569999999888776 455544333333222234568999999999
Q ss_pred CCCCCChH
Q 030935 149 FYDASGKI 156 (169)
Q Consensus 149 iy~~~~~~ 156 (169)
++|..+..
T Consensus 144 ~ehv~~~~ 151 (569)
T 4azs_A 144 FHHIVHLH 151 (569)
T ss_dssp HHHHHHHH
T ss_pred hhcCCCHH
Confidence 99987654
No 105
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.43 E-value=2.9e-13 Score=102.03 Aligned_cols=93 Identities=12% Similarity=0.054 Sum_probs=73.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCc
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADV 148 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~ 148 (169)
.++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++.. ++...+..+...+..+.+||+|+++++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~--~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~fD~v~~~~~ 102 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAF--PEAAEQAKEKLD------HVVLGDIETMDMPYEEEQFDCVIFGDV 102 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESS--HHHHHHHHTTSS------EEEESCTTTCCCCSCTTCEEEEEEESC
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCC--HHHHHHHHHhCC------cEEEcchhhcCCCCCCCccCEEEECCh
Confidence 467899999999999999999888899999999 568888876542 223233222222334468999999999
Q ss_pred CCCCCChHHHHHHHHHhccCC
Q 030935 149 FYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 149 iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+++..+...+++.+.+.|+|+
T Consensus 103 l~~~~~~~~~l~~~~~~L~~g 123 (230)
T 3cc8_A 103 LEHLFDPWAVIEKVKPYIKQN 123 (230)
T ss_dssp GGGSSCHHHHHHHTGGGEEEE
T ss_pred hhhcCCHHHHHHHHHHHcCCC
Confidence 999999999999999999985
No 106
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.43 E-value=4.8e-13 Score=102.46 Aligned_cols=95 Identities=15% Similarity=0.081 Sum_probs=74.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHH--hCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC---CCCCcEE
Q 030935 69 FSGANVVELGAGTSLPGLVAAK--VGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF---DLNPNII 143 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~--~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~---~~~fDlI 143 (169)
.++++|||+|||+|..++.+++ .+.+|+++|++ +.+++.+++|++.+++..++. +..++...... +.+||+|
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~~~fD~V 146 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERN--ETMIQYAKQNLATYHFENQVR-IIEGNALEQFENVNDKVYDMI 146 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECC--HHHHHHHHHHHHHTTCTTTEE-EEESCGGGCHHHHTTSCEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEE-EEECCHHHHHHhhccCCccEE
Confidence 3678999999999999999998 45699999999 579999999999888753332 33444433222 5689999
Q ss_pred EEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 144 LGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 144 i~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
++.. ....+..+++.+.+.|+|+
T Consensus 147 ~~~~---~~~~~~~~l~~~~~~Lkpg 169 (232)
T 3ntv_A 147 FIDA---AKAQSKKFFEIYTPLLKHQ 169 (232)
T ss_dssp EEET---TSSSHHHHHHHHGGGEEEE
T ss_pred EEcC---cHHHHHHHHHHHHHhcCCC
Confidence 9642 4667889999999999985
No 107
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.43 E-value=5.5e-13 Score=101.67 Aligned_cols=104 Identities=16% Similarity=0.034 Sum_probs=79.6
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCC
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFD 137 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~ 137 (169)
+.+++.+... ++.+|||+|||+|..+..+++. .+|+++|++ +.+++.++++...++..+.+...+..+ ...+
T Consensus 23 ~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~d~~~---~~~~ 94 (243)
T 3d2l_A 23 WVAWVLEQVE--PGKRIADIGCGTGTATLLLADH-YEVTGVDLS--EEMLEIAQEKAMETNRHVDFWVQDMRE---LELP 94 (243)
T ss_dssp HHHHHHHHSC--TTCEEEEESCTTCHHHHHHTTT-SEEEEEESC--HHHHHHHHHHHHHTTCCCEEEECCGGG---CCCS
T ss_pred HHHHHHHHcC--CCCeEEEecCCCCHHHHHHhhC-CeEEEEECC--HHHHHHHHHhhhhcCCceEEEEcChhh---cCCC
Confidence 4445555432 4689999999999999999988 899999999 579999999998777555544433332 2233
Q ss_pred CCCcEEEEcC-cCCCC---CChHHHHHHHHHhccCC
Q 030935 138 LNPNIILGAD-VFYDA---SGKICAFEILICSLFPI 169 (169)
Q Consensus 138 ~~fDlIi~sd-~iy~~---~~~~~l~~~l~~~L~p~ 169 (169)
.+||+|++.. ++++. .....+++.+.+.|+|+
T Consensus 95 ~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg 130 (243)
T 3d2l_A 95 EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDG 130 (243)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEE
T ss_pred CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCC
Confidence 6899999974 88776 55677899999999985
No 108
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.43 E-value=1.2e-12 Score=103.62 Aligned_cols=114 Identities=17% Similarity=0.162 Sum_probs=81.3
Q ss_pred cchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCC
Q 030935 52 WPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGF 130 (169)
Q Consensus 52 W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~ 130 (169)
-|.+..+.+++.......++.+|||+|||+|.+++.+++. +++|+++|++ +.+++.+++|++.+++..++. +..++
T Consensus 105 r~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis--~~al~~A~~n~~~~~l~~~v~-~~~~D 181 (284)
T 1nv8_A 105 RPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVS--SKAVEIARKNAERHGVSDRFF-VRKGE 181 (284)
T ss_dssp CTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESC--HHHHHHHHHHHHHTTCTTSEE-EEESS
T ss_pred ChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCceE-EEECc
Confidence 3567777777765433235679999999999999999998 6799999999 579999999999998863332 33344
Q ss_pred CCcCCCCCCC---cEEEEcCcCCC-----------C--------CChHHHHHHHH-HhccCC
Q 030935 131 LDASIFDLNP---NIILGADVFYD-----------A--------SGKICAFEILI-CSLFPI 169 (169)
Q Consensus 131 ~~~~~~~~~f---DlIi~sd~iy~-----------~--------~~~~~l~~~l~-~~L~p~ 169 (169)
..... +.+| |+|+++.+... . .+-..+++.+. +.|+|+
T Consensus 182 ~~~~~-~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pg 242 (284)
T 1nv8_A 182 FLEPF-KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSG 242 (284)
T ss_dssp TTGGG-GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTT
T ss_pred chhhc-ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCC
Confidence 43322 2478 99999733221 1 11126788888 988885
No 109
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.43 E-value=2.8e-12 Score=102.03 Aligned_cols=96 Identities=20% Similarity=0.157 Sum_probs=75.3
Q ss_pred cCCCCCCeEEEECCCCC-HHHHHHHH-hCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEE
Q 030935 66 RYRFSGANVVELGAGTS-LPGLVAAK-VGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNII 143 (169)
Q Consensus 66 ~~~~~~~~vLElGcGtG-l~~l~~a~-~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlI 143 (169)
....++.+|||+|||+| +.++.+++ .|++|+++|++ +++++.|+++++..++ .++. +..++... ..+.+||+|
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis--~~~l~~Ar~~~~~~gl-~~v~-~v~gDa~~-l~d~~FDvV 192 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIE--PDIAELSRKVIEGLGV-DGVN-VITGDETV-IDGLEFDVL 192 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESS--HHHHHHHHHHHHHHTC-CSEE-EEESCGGG-GGGCCCSEE
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECC--HHHHHHHHHHHHhcCC-CCeE-EEECchhh-CCCCCcCEE
Confidence 44567899999999987 55577776 58899999999 6799999999998887 3333 44455433 235699999
Q ss_pred EEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 144 LGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 144 i~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+.+-. ..+.+.+++.+.+.|+||
T Consensus 193 ~~~a~---~~d~~~~l~el~r~LkPG 215 (298)
T 3fpf_A 193 MVAAL---AEPKRRVFRNIHRYVDTE 215 (298)
T ss_dssp EECTT---CSCHHHHHHHHHHHCCTT
T ss_pred EECCC---ccCHHHHHHHHHHHcCCC
Confidence 98654 578889999999999997
No 110
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.43 E-value=4.7e-13 Score=102.26 Aligned_cols=112 Identities=10% Similarity=-0.002 Sum_probs=80.7
Q ss_pred cchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEE
Q 030935 52 WPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLT 127 (169)
Q Consensus 52 W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~ 127 (169)
-|....+..++.......++.+|||+|||+|..++.+++. +++|+++|++ +++++.+++|++.+++. .++. +.
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~g~~~~~i~-~~ 114 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPE--SEHQRQAKALFREAGYSPSRVR-FL 114 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSC--HHHHHHHHHHHHHTTCCGGGEE-EE
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHcCCCcCcEE-EE
Confidence 3444444455544433333459999999999999999885 5699999999 57999999999998876 3433 44
Q ss_pred cCCCCc---CCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 128 WGFLDA---SIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 128 ~~~~~~---~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.++..+ ...+.+||+|++.- ....+..+++.+.+.|+||
T Consensus 115 ~gda~~~l~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpG 156 (221)
T 3dr5_A 115 LSRPLDVMSRLANDSYQLVFGQV---SPMDLKALVDAAWPLLRRG 156 (221)
T ss_dssp CSCHHHHGGGSCTTCEEEEEECC---CTTTHHHHHHHHHHHEEEE
T ss_pred EcCHHHHHHHhcCCCcCeEEEcC---cHHHHHHHHHHHHHHcCCC
Confidence 444322 22246899999743 3466788999999999985
No 111
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.42 E-value=2.4e-13 Score=103.23 Aligned_cols=96 Identities=14% Similarity=0.036 Sum_probs=70.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCC---cCCC----CCC
Q 030935 70 SGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLD---ASIF----DLN 139 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~---~~~~----~~~ 139 (169)
++++|||+|||+|..++.+++. +++|+++|++ +.+++.+++|++.+++..++. +..++.. .... ..+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEIN--PDCAAITQQMLNFAGLQDKVT-ILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC--HHHHHHHHHHHHHHTCGGGEE-EEESCHHHHGGGTTTTSCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCC--hHHHHHHHHHHHHcCCCCceE-EEECCHHHHHHHHHHhcCCCc
Confidence 5689999999999999999984 5699999999 579999999999998864333 3334321 1111 158
Q ss_pred CcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 140 PNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 140 fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
||+|++.....+......+++.+ +.|+|+
T Consensus 135 fD~V~~d~~~~~~~~~~~~~~~~-~~Lkpg 163 (221)
T 3u81_A 135 LDMVFLDHWKDRYLPDTLLLEKC-GLLRKG 163 (221)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHT-TCCCTT
T ss_pred eEEEEEcCCcccchHHHHHHHhc-cccCCC
Confidence 99999865454433334556666 899986
No 112
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.42 E-value=4.7e-12 Score=96.96 Aligned_cols=101 Identities=15% Similarity=0.001 Sum_probs=76.7
Q ss_pred HHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCC-CCCC
Q 030935 61 YVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASI-FDLN 139 (169)
Q Consensus 61 ~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~-~~~~ 139 (169)
++.......++.+|||+|||+|.+++.+++.+.+|+++|++ +.+++.+++|.+.+++..++. +..++..... .+.+
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 158 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAV--EEFYKTAQKNLKKFNLGKNVK-FFNVDFKDAEVPEGI 158 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSC--HHHHHHHHHHHHHTTCCTTEE-EECSCTTTSCCCTTC
T ss_pred HHHHhcCCCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecC--HHHHHHHHHHHHHcCCCCcEE-EEEcChhhcccCCCc
Confidence 33333344578899999999999999999887799999999 569999999998887643332 3344444433 3458
Q ss_pred CcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 140 PNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 140 fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
||+|++. ..+...+++.+.+.|+|+
T Consensus 159 ~D~v~~~-----~~~~~~~l~~~~~~L~~g 183 (248)
T 2yvl_A 159 FHAAFVD-----VREPWHYLEKVHKSLMEG 183 (248)
T ss_dssp BSEEEEC-----SSCGGGGHHHHHHHBCTT
T ss_pred ccEEEEC-----CcCHHHHHHHHHHHcCCC
Confidence 9999983 346678899999999986
No 113
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.41 E-value=3.3e-13 Score=103.76 Aligned_cols=91 Identities=13% Similarity=0.133 Sum_probs=71.7
Q ss_pred CCCeEEEECCCCCHHHHHHHH--hCCeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcCCCCc-CC---CCCCCcE
Q 030935 70 SGANVVELGAGTSLPGLVAAK--VGSNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWGFLDA-SI---FDLNPNI 142 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~--~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~~~~~-~~---~~~~fDl 142 (169)
++.+|||+|||+|.+++.+++ .+.+|+++|++ +.+++.+++|++.+++. +++. .++... .. ...+||+
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~v~~~---~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSL--NKRITFLEKLSEALQLENTTFC---HDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESC--HHHHHHHHHHHHHHTCSSEEEE---ESCHHHHTTCTTTTTCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCCEEEE---eccHHHhcccccccCCccE
Confidence 678999999999999999985 35699999999 57999999999988874 3333 333222 11 1458999
Q ss_pred EEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 143 ILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
|++.. ...++.+++.+.+.|+|+
T Consensus 145 V~~~~----~~~~~~~l~~~~~~Lkpg 167 (240)
T 1xdz_A 145 VTARA----VARLSVLSELCLPLVKKN 167 (240)
T ss_dssp EEEEC----CSCHHHHHHHHGGGEEEE
T ss_pred EEEec----cCCHHHHHHHHHHhcCCC
Confidence 99876 367899999999999985
No 114
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.41 E-value=1.5e-12 Score=97.49 Aligned_cols=89 Identities=15% Similarity=-0.050 Sum_probs=70.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADV 148 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~ 148 (169)
++.+|||+|||+|..+..+ +. +|+++|++ +.+++.++++. . .+.+...+..+ .+..+.+||+|++..+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s--~~~~~~a~~~~--~--~~~~~~~d~~~--~~~~~~~fD~v~~~~~ 104 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPS--EAMLAVGRRRA--P--EATWVRAWGEA--LPFPGESFDVVLLFTT 104 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCC--HHHHHHHHHHC--T--TSEEECCCTTS--CCSCSSCEEEEEEESC
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCC--HHHHHHHHHhC--C--CcEEEEccccc--CCCCCCcEEEEEEcCh
Confidence 7789999999999998877 77 99999999 56999988876 2 23333222222 1233458999999999
Q ss_pred CCCCCChHHHHHHHHHhccCC
Q 030935 149 FYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 149 iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+++..+...+++.+.+.|+|+
T Consensus 105 l~~~~~~~~~l~~~~~~L~pg 125 (211)
T 2gs9_A 105 LEFVEDVERVLLEARRVLRPG 125 (211)
T ss_dssp TTTCSCHHHHHHHHHHHEEEE
T ss_pred hhhcCCHHHHHHHHHHHcCCC
Confidence 999999999999999999985
No 115
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.41 E-value=3.6e-13 Score=104.05 Aligned_cols=107 Identities=10% Similarity=-0.015 Sum_probs=75.2
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh----CCeEEEEcCCCcHHHHHHHHHHHHHh---CCc----------
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV----GSNVTLTDDSNRIEVLKNMRRVCEMN---KLN---------- 120 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~----ga~V~~~D~~~~~~~l~~~~~n~~~n---~~~---------- 120 (169)
+.+.+.......++.+|||+|||+|.+++.+++. +.+|+++|++ +.+++.+++|+..+ ++.
T Consensus 39 l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis--~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T 1o9g_A 39 IFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVD--PAPLELAAKNLALLSPAGLTARELERREQS 116 (250)
T ss_dssp HHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESC--HHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECC--HHHHHHHHHHHHHhhhccccccchhhhhhh
Confidence 3444443332335679999999999999999887 4589999999 57999999998766 432
Q ss_pred -----------------ce-------------EEEEEcCCCCcCC------CCCCCcEEEEcCcCCCCCC---------h
Q 030935 121 -----------------CR-------------VMGLTWGFLDASI------FDLNPNIILGADVFYDASG---------K 155 (169)
Q Consensus 121 -----------------~~-------------~~~l~~~~~~~~~------~~~~fDlIi~sd~iy~~~~---------~ 155 (169)
++ +.. ++..... ...+||+|+++.++..... +
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~ 193 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRT---ADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPV 193 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEE---CCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHH
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceee---cccccccccccccCCCCceEEEeCCCeeccccccccccccHH
Confidence 22 333 3333322 2348999999866544333 4
Q ss_pred HHHHHHHHHhccCC
Q 030935 156 ICAFEILICSLFPI 169 (169)
Q Consensus 156 ~~l~~~l~~~L~p~ 169 (169)
..+++.+.+.|+|+
T Consensus 194 ~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 194 AGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHSCTT
T ss_pred HHHHHHHHHhcCCC
Confidence 58999999999996
No 116
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.41 E-value=3.9e-13 Score=113.59 Aligned_cols=111 Identities=16% Similarity=0.234 Sum_probs=80.4
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA 133 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~ 133 (169)
...+.+.+.......++++|||+|||+|.+++.+++.++ +|+++|++ + +++.++++++.+++..++. +..++...
T Consensus 143 t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s--~-~l~~A~~~~~~~gl~~~v~-~~~~d~~~ 218 (480)
T 3b3j_A 143 TGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAS--T-MAQHAEVLVKSNNLTDRIV-VIPGKVEE 218 (480)
T ss_dssp HHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECH--H-HHHHHHHHHHHTTCTTTEE-EEESCTTT
T ss_pred HHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcH--H-HHHHHHHHHHHcCCCCcEE-EEECchhh
Confidence 334445555555556788999999999999999999876 89999998 5 8899999999998753332 33344333
Q ss_pred CCCCCCCcEEEEcCcCCCC--CChHHHHHHHHHhccCC
Q 030935 134 SIFDLNPNIILGADVFYDA--SGKICAFEILICSLFPI 169 (169)
Q Consensus 134 ~~~~~~fDlIi~sd~iy~~--~~~~~l~~~l~~~L~p~ 169 (169)
...+.+||+|++..++|+. +.....+..+.+.|+|+
T Consensus 219 ~~~~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~Lkpg 256 (480)
T 3b3j_A 219 VSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPS 256 (480)
T ss_dssp CCCSSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEE
T ss_pred CccCCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCC
Confidence 2234589999997776754 33455666778888885
No 117
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.41 E-value=4.8e-13 Score=106.79 Aligned_cols=117 Identities=9% Similarity=-0.124 Sum_probs=76.2
Q ss_pred ecchHHHHHHHHHhcc-CCCCCCeEEEECCCCCHHHHHHHHh-CCeEEEEcCCCcHHHHHHHHHHHHHhCCc-------c
Q 030935 51 VWPCSVILAEYVWQQR-YRFSGANVVELGAGTSLPGLVAAKV-GSNVTLTDDSNRIEVLKNMRRVCEMNKLN-------C 121 (169)
Q Consensus 51 ~W~~~~~La~~l~~~~-~~~~~~~vLElGcGtGl~~l~~a~~-ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-------~ 121 (169)
-|-.+..+..++.... ...++.+|||||||+|.....+++. +++|+++|++ +.|++.|++.....+.. +
T Consensus 28 n~vks~li~~~~~~~~~~~~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S--~~~l~~A~~~~~~~~~~~~~~~~~~ 105 (302)
T 2vdw_A 28 NYVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYGEIALLVATDPD--ADAIARGNERYNKLNSGIKTKYYKF 105 (302)
T ss_dssp HHHHHHHHHHHTCTTTSSCCSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHHCC----CCCEE
T ss_pred HHHHHHHHHHHHhhhhhccCCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECC--HHHHHHHHHHHHhcccccccccccc
Confidence 3555555555543211 0124779999999999655444444 5699999999 57999999987765542 1
Q ss_pred eEEEEEc-CCC-----CcCCCCCCCcEEEEcCcCCC---CCChHHHHHHHHHhccCC
Q 030935 122 RVMGLTW-GFL-----DASIFDLNPNIILGADVFYD---ASGKICAFEILICSLFPI 169 (169)
Q Consensus 122 ~~~~l~~-~~~-----~~~~~~~~fDlIi~sd~iy~---~~~~~~l~~~l~~~L~p~ 169 (169)
++...+. ++. .....+.+||+|+|..++++ ......+++.++++|+||
T Consensus 106 ~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpG 162 (302)
T 2vdw_A 106 DYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASG 162 (302)
T ss_dssp EEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEE
T ss_pred chhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCC
Confidence 1211111 111 11223458999999998864 356789999999999996
No 118
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.41 E-value=5.2e-14 Score=108.70 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=76.4
Q ss_pred CCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCC--------------------------
Q 030935 67 YRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKL-------------------------- 119 (169)
Q Consensus 67 ~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~-------------------------- 119 (169)
...++.+|||+|||+|..++.+++.+. +|+++|++ +.+++.+++++..++.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYT--DQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEE 130 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESC--HHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCC--HHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHH
Confidence 345778999999999999999999888 99999999 5699999988865431
Q ss_pred ----cc-eEEEEEcCCCCcCCCC---CCCcEEEEcCcCC----CCCChHHHHHHHHHhccCC
Q 030935 120 ----NC-RVMGLTWGFLDASIFD---LNPNIILGADVFY----DASGKICAFEILICSLFPI 169 (169)
Q Consensus 120 ----~~-~~~~l~~~~~~~~~~~---~~fDlIi~sd~iy----~~~~~~~l~~~l~~~L~p~ 169 (169)
.+ .+...+..... ...+ .+||+|+++.+++ +...+..+++.+.+.|+|+
T Consensus 131 ~l~~~v~~~~~~d~~~~~-~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg 191 (265)
T 2i62_A 131 KLRRAIKQVLKCDVTQSQ-PLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPG 191 (265)
T ss_dssp HHHHHEEEEEECCTTSSS-TTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEE
T ss_pred HhhhhheeEEEeeeccCC-CCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCC
Confidence 02 33323322211 1123 6899999999999 6667889999999999985
No 119
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.40 E-value=6e-13 Score=103.23 Aligned_cols=101 Identities=21% Similarity=0.136 Sum_probs=75.9
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCC
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFD 137 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~ 137 (169)
+.+++..... ++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++... .+...+..+ .+..+
T Consensus 44 ~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~l~~a~~~~~~-----~~~~~d~~~--~~~~~ 112 (260)
T 2avn_A 44 IGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPS--KEMLEVAREKGVK-----NVVEAKAED--LPFPS 112 (260)
T ss_dssp HHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTCEEEEEESC--HHHHHHHHHHTCS-----CEEECCTTS--CCSCT
T ss_pred HHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCC--HHHHHHHHhhcCC-----CEEECcHHH--CCCCC
Confidence 4455544433 67899999999999999999999999999999 5699999887541 123232222 12335
Q ss_pred CCCcEEEEcCcCC-CCCChHHHHHHHHHhccCC
Q 030935 138 LNPNIILGADVFY-DASGKICAFEILICSLFPI 169 (169)
Q Consensus 138 ~~fDlIi~sd~iy-~~~~~~~l~~~l~~~L~p~ 169 (169)
.+||+|++..+++ ...+...+++.+.+.|+|+
T Consensus 113 ~~fD~v~~~~~~~~~~~~~~~~l~~~~~~Lkpg 145 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVENKDKAFSEIRRVLVPD 145 (260)
T ss_dssp TCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEE
T ss_pred CCEEEEEEcchhhhccccHHHHHHHHHHHcCCC
Confidence 6899999988655 4477999999999999985
No 120
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.40 E-value=1.2e-12 Score=108.11 Aligned_cols=95 Identities=14% Similarity=0.029 Sum_probs=73.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCC--CCCCCcEEEEcC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASI--FDLNPNIILGAD 147 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~--~~~~fDlIi~sd 147 (169)
+|++|||+|||||..++.+++.|++|+++|++ +.+++.+++|++.|++..++. .++..... ....||+|++..
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis--~~al~~a~~n~~~ng~~~~~~---~~D~~~~l~~~~~~fD~Ii~dp 288 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKD--LEALGVLDQAALRLGLRVDIR---HGEALPTLRGLEGPFHHVLLDP 288 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHTCCCEEE---ESCHHHHHHTCCCCEEEEEECC
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECC--HHHHHHHHHHHHHhCCCCcEE---EccHHHHHHHhcCCCCEEEECC
Confidence 48899999999999999999999999999999 679999999999999875544 34432211 133499999854
Q ss_pred cCCCC---------CChHHHHHHHHHhccCC
Q 030935 148 VFYDA---------SGKICAFEILICSLFPI 169 (169)
Q Consensus 148 ~iy~~---------~~~~~l~~~l~~~L~p~ 169 (169)
+.|.. ..+..+++.+.+.|+|+
T Consensus 289 P~f~~~~~~~~~~~~~~~~ll~~a~~~LkpG 319 (393)
T 4dmg_A 289 PTLVKRPEELPAMKRHLVDLVREALRLLAEE 319 (393)
T ss_dssp CCCCSSGGGHHHHHHHHHHHHHHHHHTEEEE
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 44332 23467888888888885
No 121
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.40 E-value=5.4e-13 Score=101.01 Aligned_cols=94 Identities=20% Similarity=0.114 Sum_probs=72.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC------CCCC
Q 030935 70 SGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF------DLNP 140 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~------~~~f 140 (169)
++++|||+|||+|..++.+++. +++|+++|++ +.+++.+++|++.+++..++. +..++...... ..+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEAS--EKHADIARSNIERANLNDRVE-VRTGLALDSLQQIENEKYEPF 134 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESC--HHHHHHHHHHHHHTTCTTTEE-EEESCHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEE-EEEcCHHHHHHHHHhcCCCCc
Confidence 5789999999999999999987 6799999999 579999999999888754333 33343322111 1479
Q ss_pred cEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 141 NIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 141 DlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
|+|++... ......+++.+.+.|+|+
T Consensus 135 D~v~~d~~---~~~~~~~l~~~~~~L~pg 160 (223)
T 3duw_A 135 DFIFIDAD---KQNNPAYFEWALKLSRPG 160 (223)
T ss_dssp SEEEECSC---GGGHHHHHHHHHHTCCTT
T ss_pred CEEEEcCC---cHHHHHHHHHHHHhcCCC
Confidence 99997543 456788999999999996
No 122
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.40 E-value=6.8e-13 Score=104.91 Aligned_cols=95 Identities=18% Similarity=0.138 Sum_probs=73.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhC----CcceEEEEEcCCCCcCCCCCCCcEEEE
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNK----LNCRVMGLTWGFLDASIFDLNPNIILG 145 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~----~~~~~~~l~~~~~~~~~~~~~fDlIi~ 145 (169)
++.+|||||||+|..+..+++.|.+|+++|++ +.+++.+++++..++ ..+.+...+.. ....+.+||+|++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~---~~~~~~~fD~v~~ 156 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGWEVTALELS--TSVLAAFRKRLAEAPADVRDRCTLVQGDMS---AFALDKRFGTVVI 156 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTCCEEEEESC--HHHHHHHHHHHHTSCHHHHTTEEEEECBTT---BCCCSCCEEEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHcCCeEEEEECC--HHHHHHHHHHHhhcccccccceEEEeCchh---cCCcCCCcCEEEE
Confidence 34599999999999999999999999999999 579999999998766 23444433333 3223569999997
Q ss_pred c-CcCCCCC--ChHHHHHHHHHhccCC
Q 030935 146 A-DVFYDAS--GKICAFEILICSLFPI 169 (169)
Q Consensus 146 s-d~iy~~~--~~~~l~~~l~~~L~p~ 169 (169)
+ .++++.. ....+++.+.+.|+|+
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~L~pg 183 (299)
T 3g2m_A 157 SSGSINELDEADRRGLYASVREHLEPG 183 (299)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHEEEE
T ss_pred CCcccccCCHHHHHHHHHHHHHHcCCC
Confidence 6 5555554 4689999999999985
No 123
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.40 E-value=3.1e-12 Score=96.16 Aligned_cols=108 Identities=16% Similarity=0.023 Sum_probs=77.4
Q ss_pred ecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhC---CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEE
Q 030935 51 VWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVG---SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLT 127 (169)
Q Consensus 51 ~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g---a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~ 127 (169)
.|......+ ++.+.....++.+|||+|||+|..+..+++.+ .+|+++|++ +.+++.+++++..++... + .+.
T Consensus 59 ~~~~~~~~~-~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~-v-~~~ 133 (215)
T 2yxe_A 59 TISAIHMVG-MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERI--PELAEKAERTLRKLGYDN-V-IVI 133 (215)
T ss_dssp EECCHHHHH-HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC--HHHHHHHHHHHHHHTCTT-E-EEE
T ss_pred EeCcHHHHH-HHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCC-e-EEE
Confidence 344444433 44444445578899999999999999998875 699999999 569999999998877642 2 233
Q ss_pred cCCCCcCCC-CCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 128 WGFLDASIF-DLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 128 ~~~~~~~~~-~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.++...... ..+||+|+++.++++.. +.+.+.|+|+
T Consensus 134 ~~d~~~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pg 170 (215)
T 2yxe_A 134 VGDGTLGYEPLAPYDRIYTTAAGPKIP------EPLIRQLKDG 170 (215)
T ss_dssp ESCGGGCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEE
T ss_pred ECCcccCCCCCCCeeEEEECCchHHHH------HHHHHHcCCC
Confidence 344333332 45899999999988655 4777888874
No 124
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.39 E-value=1.8e-12 Score=98.43 Aligned_cols=105 Identities=10% Similarity=0.006 Sum_probs=76.8
Q ss_pred cchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCC
Q 030935 52 WPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFL 131 (169)
Q Consensus 52 W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~ 131 (169)
|..... ..++.+.....++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++...++ .+.+. .++.
T Consensus 53 ~~~~~~-~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~--~~~~~~a~~~~~~~~-~v~~~---~~d~ 125 (231)
T 1vbf_A 53 TTALNL-GIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEIN--EKMYNYASKLLSYYN-NIKLI---LGDG 125 (231)
T ss_dssp ECCHHH-HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESC--HHHHHHHHHHHTTCS-SEEEE---ESCG
T ss_pred cCCHHH-HHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCC--HHHHHHHHHHHhhcC-CeEEE---ECCc
Confidence 444433 4444444445578899999999999999999998999999999 579999999988766 44433 3333
Q ss_pred CcCC-CCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 132 DASI-FDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 132 ~~~~-~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.... ...+||+|++..++++.. +.+.+.|+|+
T Consensus 126 ~~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pg 158 (231)
T 1vbf_A 126 TLGYEEEKPYDRVVVWATAPTLL------CKPYEQLKEG 158 (231)
T ss_dssp GGCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEE
T ss_pred ccccccCCCccEEEECCcHHHHH------HHHHHHcCCC
Confidence 2222 245899999999988654 3577788874
No 125
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.39 E-value=7.9e-13 Score=100.63 Aligned_cols=87 Identities=17% Similarity=0.007 Sum_probs=68.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC-CCCCcEEEEcCc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF-DLNPNIILGADV 148 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~-~~~fDlIi~sd~ 148 (169)
++.+|||+|||+|..+..+++.+++|+++|++ +.+++.++++ ...+++...++.+. .+.. +.+||+|+++
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~----~~~~~~~~~d~~~~-~~~~~~~~fD~v~~~-- 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFS--PELLKLARAN----APHADVYEWNGKGE-LPAGLGAPFGLIVSR-- 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESC--HHHHHHHHHH----CTTSEEEECCSCSS-CCTTCCCCEEEEEEE--
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECC--HHHHHHHHHh----CCCceEEEcchhhc-cCCcCCCCEEEEEeC--
Confidence 67899999999999999999999999999999 5699999887 22344444444221 1233 5689999997
Q ss_pred CCCCCChHHHHHHHHHhccCC
Q 030935 149 FYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 149 iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.+...+++.+.+.|+|+
T Consensus 119 ----~~~~~~l~~~~~~Lkpg 135 (226)
T 3m33_A 119 ----RGPTSVILRLPELAAPD 135 (226)
T ss_dssp ----SCCSGGGGGHHHHEEEE
T ss_pred ----CCHHHHHHHHHHHcCCC
Confidence 46778889999999985
No 126
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.39 E-value=7e-13 Score=105.27 Aligned_cols=98 Identities=13% Similarity=0.011 Sum_probs=76.5
Q ss_pred CCCCeEEEECCCCCHHHHHHH--H-hCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEE
Q 030935 69 FSGANVVELGAGTSLPGLVAA--K-VGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILG 145 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a--~-~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~ 145 (169)
.++.+|||+|||+|..++.++ . .+.+|+++|++ +.+++.+++|+..++...++. +..++......+.+||+|++
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~~fD~v~~ 193 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYD--PEALDGATRLAAGHALAGQIT-LHRQDAWKLDTREGYDLLTS 193 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESC--HHHHHHHHHHHTTSTTGGGEE-EEECCGGGCCCCSCEEEEEC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECC--HHHHHHHHHHHHhcCCCCceE-EEECchhcCCccCCeEEEEE
Confidence 467899999999999999885 2 24599999999 579999999998887763332 23333333223379999999
Q ss_pred cCcCCCCCChHH---HHHHHHHhccCC
Q 030935 146 ADVFYDASGKIC---AFEILICSLFPI 169 (169)
Q Consensus 146 sd~iy~~~~~~~---l~~~l~~~L~p~ 169 (169)
+.++++..+.+. +++.+.+.|+||
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~Lkpg 220 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPG 220 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEE
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCC
Confidence 999998877665 799999999985
No 127
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.38 E-value=1e-12 Score=103.78 Aligned_cols=97 Identities=11% Similarity=0.094 Sum_probs=69.6
Q ss_pred CCCeEEEECCCCCHHHHHHH----Hh--CCeE--EEEcCCCcHHHHHHHHHHHHHh-CCc-ceEEEEEcCCCCc------
Q 030935 70 SGANVVELGAGTSLPGLVAA----KV--GSNV--TLTDDSNRIEVLKNMRRVCEMN-KLN-CRVMGLTWGFLDA------ 133 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a----~~--ga~V--~~~D~~~~~~~l~~~~~n~~~n-~~~-~~~~~l~~~~~~~------ 133 (169)
++.+|||+|||+|.++..++ .. +.+| +++|.+ ++|++.+++++... ++. +++. ..-++...
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S--~~ml~~a~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPS--AEQIAKYKELVAKTSNLENVKFA-WHKETSSEYQSRML 128 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSC--HHHHHHHHHHHHTCSSCTTEEEE-EECSCHHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCC--HHHHHHHHHHHHhccCCCcceEE-EEecchhhhhhhhc
Confidence 45699999999997765332 22 3344 999999 67999999987643 332 2221 22222111
Q ss_pred -CCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 134 -SIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 134 -~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
...+.+||+|+++.++|+..+.+.+++.+.+.||||
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg 165 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN 165 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCC
Confidence 123568999999999999999999999999999996
No 128
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.38 E-value=3.1e-12 Score=100.26 Aligned_cols=99 Identities=13% Similarity=0.119 Sum_probs=74.4
Q ss_pred HHHhccCCCCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHh-CCc-ceEEEEEcCCCCcCC
Q 030935 61 YVWQQRYRFSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMN-KLN-CRVMGLTWGFLDASI 135 (169)
Q Consensus 61 ~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n-~~~-~~~~~l~~~~~~~~~ 135 (169)
++.......++.+|||+|||+|..++.+++. +.+|+++|++ +.+++.+++|++.+ +.. ++ +..++.....
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~g~~~v~---~~~~d~~~~~ 175 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERD--EDNLKKAMDNLSEFYDIGNVR---TSRSDIADFI 175 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSC--HHHHHHHHHHHHTTSCCTTEE---EECSCTTTCC
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECC--HHHHHHHHHHHHhcCCCCcEE---EEECchhccC
Confidence 4444444557889999999999999999987 6799999999 56999999999887 643 33 3345544444
Q ss_pred CCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 136 FDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 136 ~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.+.+||+|++ +......+++.+.+.|+|+
T Consensus 176 ~~~~fD~Vi~-----~~~~~~~~l~~~~~~Lkpg 204 (275)
T 1yb2_A 176 SDQMYDAVIA-----DIPDPWNHVQKIASMMKPG 204 (275)
T ss_dssp CSCCEEEEEE-----CCSCGGGSHHHHHHTEEEE
T ss_pred cCCCccEEEE-----cCcCHHHHHHHHHHHcCCC
Confidence 4468999998 3456788999999999985
No 129
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.38 E-value=3.9e-12 Score=112.63 Aligned_cols=114 Identities=15% Similarity=0.039 Sum_probs=85.2
Q ss_pred cchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhC---CeEEEEcCCCcHHHHHHHHHHHHHh------CCcce
Q 030935 52 WPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVG---SNVTLTDDSNRIEVLKNMRRVCEMN------KLNCR 122 (169)
Q Consensus 52 W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g---a~V~~~D~~~~~~~l~~~~~n~~~n------~~~~~ 122 (169)
-|-.....+++.......++.+|||||||+|.+++.+++.+ .+|+++|++ +.|++.++++++.. +.. +
T Consensus 703 PPL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS--~emLe~AReRLa~~lnAkr~gl~-n 779 (950)
T 3htx_A 703 PPLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDIS--PKGLARAAKMLHVKLNKEACNVK-S 779 (950)
T ss_dssp SCHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESC--HHHHHHHHHHHHHHTTTTCSSCS-E
T ss_pred chHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECC--HHHHHHHHHHhhhccchhhcCCC-c
Confidence 34444555555554444478899999999999999999987 699999999 57999999877643 222 2
Q ss_pred EEEEEcCCCCc-CCCCCCCcEEEEcCcCCCCCChH--HHHHHHHHhccCC
Q 030935 123 VMGLTWGFLDA-SIFDLNPNIILGADVFYDASGKI--CAFEILICSLFPI 169 (169)
Q Consensus 123 ~~~l~~~~~~~-~~~~~~fDlIi~sd~iy~~~~~~--~l~~~l~~~L~p~ 169 (169)
..+..++... .....+||+|++..++++..+.. .+++.+.+.|+||
T Consensus 780 -VefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG 828 (950)
T 3htx_A 780 -ATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK 828 (950)
T ss_dssp -EEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS
T ss_pred -eEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC
Confidence 2344455433 23346899999999999988754 5899999999996
No 130
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.37 E-value=2.6e-12 Score=97.30 Aligned_cols=95 Identities=8% Similarity=-0.205 Sum_probs=70.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcCCCCc---CCCCCCCcEE
Q 030935 70 SGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWGFLDA---SIFDLNPNII 143 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~~~~~---~~~~~~fDlI 143 (169)
.+.+|||||||+|..++.+++. +.+|+++|++ +.+++.+++|++.+++. +.+ ..++... .+.+..||.|
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s--~~~l~~a~~~~~~~~~~nv~~---~~~d~~~l~~~~~~~~~d~v 112 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELF--KSVIVTAVQKVKDSEAQNVKL---LNIDADTLTDVFEPGEVKRV 112 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSC--HHHHHHHHHHHHHSCCSSEEE---ECCCGGGHHHHCCTTSCCEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEec--hHHHHHHHHHHHHcCCCCEEE---EeCCHHHHHhhcCcCCcCEE
Confidence 4679999999999999999987 5699999999 57999999999988764 333 3333322 1334589999
Q ss_pred EEcCcCCCCC--------ChHHHHHHHHHhccCC
Q 030935 144 LGADVFYDAS--------GKICAFEILICSLFPI 169 (169)
Q Consensus 144 i~sd~iy~~~--------~~~~l~~~l~~~L~p~ 169 (169)
++.-...+.. ..+.+++.+.+.|+|+
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~Lkpg 146 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG 146 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS
T ss_pred EEECCCCCcCccccccccCcHHHHHHHHHHcCCC
Confidence 8753322221 1478999999999996
No 131
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.37 E-value=1.8e-12 Score=96.26 Aligned_cols=98 Identities=17% Similarity=0.045 Sum_probs=72.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-C--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC--CCCCCCcEE
Q 030935 69 FSGANVVELGAGTSLPGLVAAKV-G--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS--IFDLNPNII 143 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~-g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~--~~~~~fDlI 143 (169)
.++.+|||+|||+|..++.+++. + .+|+++|++ +.+++.+++|++.+++..++. +..++.... ..+.+||+|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQ--DKAIANTTKKLTDLNLIDRVT-LIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSC--HHHHHHHHHHHHHTTCGGGEE-EECSCGGGGGGTCCSCEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCCeE-EEECCHHHHhhhccCCceEE
Confidence 36789999999999999999886 2 499999999 579999999999988743332 334443221 334689999
Q ss_pred EEcCcCCCC---------CChHHHHHHHHHhccCC
Q 030935 144 LGADVFYDA---------SGKICAFEILICSLFPI 169 (169)
Q Consensus 144 i~sd~iy~~---------~~~~~l~~~l~~~L~p~ 169 (169)
++..+++.. .....+++.+.+.|+|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g 132 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG 132 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCC
Confidence 987544221 13457899999999985
No 132
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.37 E-value=8.4e-13 Score=98.62 Aligned_cols=106 Identities=16% Similarity=0.045 Sum_probs=78.2
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCC
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASI 135 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~ 135 (169)
.+.+++.+.. .++.+|||+|||+|.++..+++.+. +|+++|++ +.+++.++++... ...+.+...+..+. +.
T Consensus 31 ~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s--~~~~~~a~~~~~~-~~~i~~~~~d~~~~--~~ 103 (215)
T 2pxx_A 31 SFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYS--SVVVAAMQACYAH-VPQLRWETMDVRKL--DF 103 (215)
T ss_dssp HHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESC--HHHHHHHHHHTTT-CTTCEEEECCTTSC--CS
T ss_pred HHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCC--HHHHHHHHHhccc-CCCcEEEEcchhcC--CC
Confidence 4566666543 3677999999999999999999887 89999999 5699999988763 12334333333222 33
Q ss_pred CCCCCcEEEEcCcCCCC---------------CChHHHHHHHHHhccCC
Q 030935 136 FDLNPNIILGADVFYDA---------------SGKICAFEILICSLFPI 169 (169)
Q Consensus 136 ~~~~fDlIi~sd~iy~~---------------~~~~~l~~~l~~~L~p~ 169 (169)
.+.+||+|+++.++.+. .....+++.+.+.|+|+
T Consensus 104 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 152 (215)
T 2pxx_A 104 PSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG 152 (215)
T ss_dssp CSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE
T ss_pred CCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC
Confidence 44689999998877533 25688999999999985
No 133
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.37 E-value=1.4e-12 Score=100.06 Aligned_cols=95 Identities=12% Similarity=0.027 Sum_probs=70.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC--eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCC-CCcEEEEc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS--NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDL-NPNIILGA 146 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga--~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~-~fDlIi~s 146 (169)
++.+|||+|||+|.+++.+++.+. +|+++|++ +.+++.|++|++.|++..++. +..++....+.+. +||+|+.+
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~--~~al~~A~~N~~~~gl~~~i~-~~~~d~l~~l~~~~~~D~Ivia 91 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVV--EGPYQSAVKNVEAHGLKEKIQ-VRLANGLAAFEETDQVSVITIA 91 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESS--HHHHHHHHHHHHHTTCTTTEE-EEECSGGGGCCGGGCCCEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHHHcCCCceEE-EEECchhhhcccCcCCCEEEEc
Confidence 567999999999999999999874 79999999 579999999999999865433 4455554444433 79988865
Q ss_pred CcCCCCCChHHHHHHHHHhccCC
Q 030935 147 DVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
..-- ..+..+++...+.|+|+
T Consensus 92 G~Gg--~~i~~Il~~~~~~L~~~ 112 (225)
T 3kr9_A 92 GMGG--RLIARILEEGLGKLANV 112 (225)
T ss_dssp EECH--HHHHHHHHHTGGGCTTC
T ss_pred CCCh--HHHHHHHHHHHHHhCCC
Confidence 4321 22566777777777663
No 134
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.37 E-value=1.8e-12 Score=102.46 Aligned_cols=93 Identities=16% Similarity=-0.032 Sum_probs=71.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADV 148 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~ 148 (169)
+|.+|||+|||+|.+++.+|+.|+ +|+++|++ +.+++.+++|++.|++..++..+ .++.........||.|+...+
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~n--p~a~~~~~~N~~~N~v~~~v~~~-~~D~~~~~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKD--PYTFKFLVENIHLNKVEDRMSAY-NMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCC--HHHHHHHHHHHHHTTCTTTEEEE-CSCTTTCCCCSCEEEEEECCC
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECC--HHHHHHHHHHHHHcCCCCcEEEE-eCcHHHhccccCCCEEEECCC
Confidence 688999999999999999999986 89999999 67999999999999997655433 344434344568999998766
Q ss_pred CCCCCChHHHHHHHHHhccCC
Q 030935 149 FYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 149 iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.+.. .++....+.|+||
T Consensus 202 ~~~~----~~l~~a~~~lk~g 218 (278)
T 3k6r_A 202 VRTH----EFIPKALSIAKDG 218 (278)
T ss_dssp SSGG----GGHHHHHHHEEEE
T ss_pred CcHH----HHHHHHHHHcCCC
Confidence 5543 4455555666653
No 135
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.37 E-value=6.1e-12 Score=98.56 Aligned_cols=99 Identities=12% Similarity=-0.014 Sum_probs=74.8
Q ss_pred HhccCCCCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCC
Q 030935 63 WQQRYRFSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLN 139 (169)
Q Consensus 63 ~~~~~~~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~ 139 (169)
.......++.+|||+|||+|.+++.+++. +.+|+++|++ +.+++.+++|++.+++..++. +..++......+.+
T Consensus 105 ~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~~ 181 (277)
T 1o54_A 105 AMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKR--EEFAKLAESNLTKWGLIERVT-IKVRDISEGFDEKD 181 (277)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCC--HHHHHHHHHHHHHTTCGGGEE-EECCCGGGCCSCCS
T ss_pred HHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECC--HHHHHHHHHHHHHcCCCCCEE-EEECCHHHcccCCc
Confidence 33334556889999999999999999987 4599999999 579999999999888733322 33444433334458
Q ss_pred CcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 140 PNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 140 fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
||+|++. ......+++.+.+.|+|+
T Consensus 182 ~D~V~~~-----~~~~~~~l~~~~~~L~pg 206 (277)
T 1o54_A 182 VDALFLD-----VPDPWNYIDKCWEALKGG 206 (277)
T ss_dssp EEEEEEC-----CSCGGGTHHHHHHHEEEE
T ss_pred cCEEEEC-----CcCHHHHHHHHHHHcCCC
Confidence 9999983 355678899999999885
No 136
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.37 E-value=1.8e-12 Score=98.57 Aligned_cols=102 Identities=11% Similarity=-0.022 Sum_probs=75.5
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF 136 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~ 136 (169)
.+.+++.... .++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++.. .+++...+.. ....
T Consensus 29 ~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s--~~~~~~a~~~~~----~~~~~~~d~~---~~~~ 97 (239)
T 3bxo_A 29 DIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFGDTAGLELS--EDMLTHARKRLP----DATLHQGDMR---DFRL 97 (239)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESC--HHHHHHHHHHCT----TCEEEECCTT---TCCC
T ss_pred HHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCC--HHHHHHHHHhCC----CCEEEECCHH---Hccc
Confidence 4555555443 367899999999999999999988899999999 569999887642 2333333332 2222
Q ss_pred CCCCcEEEE-cCcCCCC---CChHHHHHHHHHhccCC
Q 030935 137 DLNPNIILG-ADVFYDA---SGKICAFEILICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~-sd~iy~~---~~~~~l~~~l~~~L~p~ 169 (169)
+.+||+|+| .+++++. .....+++.+.+.|+|+
T Consensus 98 ~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg 134 (239)
T 3bxo_A 98 GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPG 134 (239)
T ss_dssp SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEE
T ss_pred CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCC
Confidence 568999995 5588776 45678999999999985
No 137
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.37 E-value=6.1e-12 Score=93.99 Aligned_cols=92 Identities=18% Similarity=0.151 Sum_probs=68.5
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
..++.+|||+|||+|.+++.+++.+. +|+++|++ +.+++.+++|++.+++.+.+. .++... .+.+||+|+++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~---~~d~~~--~~~~~D~v~~~ 119 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVD--KEAVDVLIENLGEFKGKFKVF---IGDVSE--FNSRVDIVIMN 119 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHTGGGTTSEEEE---ESCGGG--CCCCCSEEEEC
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECC--HHHHHHHHHHHHHcCCCEEEE---ECchHH--cCCCCCEEEEc
Confidence 45788999999999999999999876 79999999 569999999999888744433 344322 13489999987
Q ss_pred CcCCCC--CChHHHHHHHHHhc
Q 030935 147 DVFYDA--SGKICAFEILICSL 166 (169)
Q Consensus 147 d~iy~~--~~~~~l~~~l~~~L 166 (169)
.+++.. .....+++.+.+.|
T Consensus 120 ~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 120 PPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp CCCSSSSTTTTHHHHHHHHHHC
T ss_pred CCCccccCCchHHHHHHHHHhc
Confidence 765544 23445666665544
No 138
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.36 E-value=1.6e-12 Score=100.67 Aligned_cols=94 Identities=13% Similarity=0.057 Sum_probs=72.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc---CCC-CCCCcE
Q 030935 70 SGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA---SIF-DLNPNI 142 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~---~~~-~~~fDl 142 (169)
++++|||+|||+|..++.+++. +.+|+++|++ +.+++.+++|++.+++..++. +..++... ... ..+||+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~g~~~~v~-~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEAD--AHHAQVARENLQLAGVDQRVT-LREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECC--HHHHHHHHHHHHHTTCTTTEE-EEESCHHHHHHTCCSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEE-EEEcCHHHHHHhcCCCCCeEE
Confidence 5789999999999999999986 6699999999 579999999999888763332 33333221 111 248999
Q ss_pred EEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 143 ILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
|++.- .......+++.+.+.|+||
T Consensus 140 V~~d~---~~~~~~~~l~~~~~~LkpG 163 (248)
T 3tfw_A 140 IFIDA---DKPNNPHYLRWALRYSRPG 163 (248)
T ss_dssp EEECS---CGGGHHHHHHHHHHTCCTT
T ss_pred EEECC---chHHHHHHHHHHHHhcCCC
Confidence 99743 3566788999999999996
No 139
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.36 E-value=2.8e-12 Score=99.40 Aligned_cols=94 Identities=15% Similarity=0.041 Sum_probs=73.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC---C-----CCC
Q 030935 70 SGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS---I-----FDL 138 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~---~-----~~~ 138 (169)
++++|||+|||+|..++.+++. +.+|+++|+++ .+++.+++|++.+++..++. +..++.... . ...
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~--~~~~~a~~~~~~~g~~~~i~-~~~gda~~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINK--ENYELGLPVIKKAGVDHKID-FREGPALPVLDEMIKDEKNHG 155 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCC--HHHHHHHHHHHHTTCGGGEE-EEESCHHHHHHHHHHSGGGTT
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHHcCCCCCeE-EEECCHHHHHHHHHhccCCCC
Confidence 5679999999999999999986 67999999996 59999999999888754433 333443221 1 146
Q ss_pred CCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 139 NPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 139 ~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+||+|++.. ....+..+++.+.+.|+||
T Consensus 156 ~fD~V~~d~---~~~~~~~~l~~~~~~LkpG 183 (247)
T 1sui_A 156 SYDFIFVDA---DKDNYLNYHKRLIDLVKVG 183 (247)
T ss_dssp CBSEEEECS---CSTTHHHHHHHHHHHBCTT
T ss_pred CEEEEEEcC---chHHHHHHHHHHHHhCCCC
Confidence 899999743 2467899999999999996
No 140
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.35 E-value=9.8e-13 Score=99.59 Aligned_cols=94 Identities=12% Similarity=0.078 Sum_probs=72.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC---CCC----CC
Q 030935 70 SGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS---IFD----LN 139 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~---~~~----~~ 139 (169)
++++|||+|||+|..++.+++. +.+|+++|++ +.+++.++++++.+++..++. +..++..+. ... .+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVD--EKSTALAKEYWEKAGLSDKIG-LRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESC--HHHHHHHHHHHHHTTCTTTEE-EEESCHHHHHHHHHTTTCTTC
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHHCCCCCceE-EEeCCHHHHHHHhhhccCCCC
Confidence 5679999999999999999986 6799999999 579999999999888764333 333433221 111 68
Q ss_pred CcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 140 PNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 140 fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
||+|++.. ....+..+++.+.+.|+|+
T Consensus 141 fD~v~~~~---~~~~~~~~l~~~~~~L~pg 167 (225)
T 3tr6_A 141 YDLIYIDA---DKANTDLYYEESLKLLREG 167 (225)
T ss_dssp EEEEEECS---CGGGHHHHHHHHHHHEEEE
T ss_pred ccEEEECC---CHHHHHHHHHHHHHhcCCC
Confidence 99999533 2456788999999999985
No 141
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.35 E-value=5.7e-12 Score=100.85 Aligned_cols=103 Identities=17% Similarity=0.046 Sum_probs=76.5
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC---eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS---NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA 133 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga---~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~ 133 (169)
.+...+.......++.+|||+|||+|.+++.+++.+. +|+++|++ +++++.+++|++.+++.. + .+..++...
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s--~~~~~~a~~~~~~~g~~~-v-~~~~~d~~~ 137 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYS--RKICEIAKRNVERLGIEN-V-IFVCGDGYY 137 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESC--HHHHHHHHHHHHHTTCCS-E-EEEESCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECC--HHHHHHHHHHHHHcCCCC-e-EEEECChhh
Confidence 4444555544555788999999999999999998755 49999999 579999999999887653 2 233344333
Q ss_pred CC-CCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 134 SI-FDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 134 ~~-~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.. ...+||+|++..++.+.. +.+.+.|+|+
T Consensus 138 ~~~~~~~fD~Iv~~~~~~~~~------~~~~~~Lkpg 168 (317)
T 1dl5_A 138 GVPEFSPYDVIFVTVGVDEVP------ETWFTQLKEG 168 (317)
T ss_dssp CCGGGCCEEEEEECSBBSCCC------HHHHHHEEEE
T ss_pred ccccCCCeEEEEEcCCHHHHH------HHHHHhcCCC
Confidence 22 235899999999988765 5677888875
No 142
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.35 E-value=2.7e-12 Score=98.83 Aligned_cols=94 Identities=10% Similarity=-0.018 Sum_probs=68.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC--eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCC-CCcEEEEc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS--NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDL-NPNIILGA 146 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga--~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~-~fDlIi~s 146 (169)
++.+|||+|||+|.+++.+++.+. +|+++|++ +.+++.|++|++.|++..++. +..++......+. +||+|+.+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~--~~al~~A~~N~~~~gl~~~I~-~~~gD~l~~~~~~~~~D~Ivia 97 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVV--NGPYQSALKNVSEHGLTSKID-VRLANGLSAFEEADNIDTITIC 97 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESS--HHHHHHHHHHHHHTTCTTTEE-EEECSGGGGCCGGGCCCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEE-EEECchhhccccccccCEEEEe
Confidence 567999999999999999999874 79999999 579999999999999865443 4455554444443 79998754
Q ss_pred CcCCCCCChHHHHHHHHHhccC
Q 030935 147 DVFYDASGKICAFEILICSLFP 168 (169)
Q Consensus 147 d~iy~~~~~~~l~~~l~~~L~p 168 (169)
-+-- ..+..+++.....|+|
T Consensus 98 GmGg--~lI~~IL~~~~~~l~~ 117 (230)
T 3lec_A 98 GMGG--RLIADILNNDIDKLQH 117 (230)
T ss_dssp EECH--HHHHHHHHHTGGGGTT
T ss_pred CCch--HHHHHHHHHHHHHhCc
Confidence 4432 2244555555555554
No 143
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.35 E-value=3.7e-12 Score=97.14 Aligned_cols=94 Identities=11% Similarity=0.089 Sum_probs=73.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC--CC--CCCCcEE
Q 030935 70 SGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS--IF--DLNPNII 143 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~--~~--~~~fDlI 143 (169)
++.+|||+|||+|..++.+++. +.+|+++|++ +.+++.+++|++.++...++. +..++.... .. +.+||+|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERD--ERRYEEAHKHVKALGLESRIE-LLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCC--HHHHHHHHHHHHHTTCTTTEE-EECSCGGGSHHHHTTSCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEE-EEECCHHHHHHhcccCCCccEE
Confidence 5779999999999999999987 5799999999 579999999999888743332 334443321 11 4589999
Q ss_pred EEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 144 LGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 144 i~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
++.... .....+++.+.+.|+|+
T Consensus 131 ~~~~~~---~~~~~~l~~~~~~L~pg 153 (233)
T 2gpy_A 131 FIDAAK---GQYRRFFDMYSPMVRPG 153 (233)
T ss_dssp EEEGGG---SCHHHHHHHHGGGEEEE
T ss_pred EECCCH---HHHHHHHHHHHHHcCCC
Confidence 986553 47789999999999985
No 144
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.35 E-value=3.9e-12 Score=93.04 Aligned_cols=101 Identities=14% Similarity=0.105 Sum_probs=71.0
Q ss_pred cchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCC
Q 030935 52 WPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFL 131 (169)
Q Consensus 52 W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~ 131 (169)
.|.+..|.+++... ..++.+|||+|||+|.+++.+++.+ +|+++|++ +.+++. .+ ++++. .++.
T Consensus 7 ~~~~~~l~~~l~~~--~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s--~~~~~~------~~--~~~~~---~~d~ 70 (170)
T 3q87_B 7 GEDTYTLMDALERE--GLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLN--IRALES------HR--GGNLV---RADL 70 (170)
T ss_dssp CHHHHHHHHHHHHH--TCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESC--HHHHHT------CS--SSCEE---ECST
T ss_pred CccHHHHHHHHHhh--cCCCCeEEEeccCccHHHHHHHhcC-cEEEEECC--HHHHhc------cc--CCeEE---ECCh
Confidence 45677788776442 1356799999999999999999999 99999999 568876 12 23333 3444
Q ss_pred CcCCCCCCCcEEEEcCcCCCCCCh---------HHHHHHHHHhccCC
Q 030935 132 DASIFDLNPNIILGADVFYDASGK---------ICAFEILICSLFPI 169 (169)
Q Consensus 132 ~~~~~~~~fDlIi~sd~iy~~~~~---------~~l~~~l~~~L~p~ 169 (169)
.....+.+||+|+++.++++.... ..+++.+.+.| |+
T Consensus 71 ~~~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pg 116 (170)
T 3q87_B 71 LCSINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TV 116 (170)
T ss_dssp TTTBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CS
T ss_pred hhhcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CC
Confidence 344444699999998777654433 55667776666 53
No 145
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.34 E-value=8e-12 Score=96.18 Aligned_cols=99 Identities=16% Similarity=0.078 Sum_probs=74.8
Q ss_pred HHHhccCCCCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHh-CCc-ceEEEEEcCCCCcC-
Q 030935 61 YVWQQRYRFSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMN-KLN-CRVMGLTWGFLDAS- 134 (169)
Q Consensus 61 ~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n-~~~-~~~~~l~~~~~~~~- 134 (169)
++.......++.+|||+|||+|..++.+++. +.+|+++|++ +.+++.+++|++.+ +.. +. +..++....
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~--~~~~~~a~~~~~~~~g~~~v~---~~~~d~~~~~ 161 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEAR--PHHLAQAERNVRAFWQVENVR---FHLGKLEEAE 161 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC--HHHHHHHHHHHHHHCCCCCEE---EEESCGGGCC
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCC--HHHHHHHHHHHHHhcCCCCEE---EEECchhhcC
Confidence 4444444557889999999999999999987 5699999999 56999999999887 632 33 333443333
Q ss_pred CCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 135 IFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 135 ~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
..+.+||+|++. ......+++.+.+.|+|+
T Consensus 162 ~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~g 191 (258)
T 2pwy_A 162 LEEAAYDGVALD-----LMEPWKVLEKAALALKPD 191 (258)
T ss_dssp CCTTCEEEEEEE-----SSCGGGGHHHHHHHEEEE
T ss_pred CCCCCcCEEEEC-----CcCHHHHHHHHHHhCCCC
Confidence 344589999983 456678999999999985
No 146
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.34 E-value=8.8e-12 Score=101.10 Aligned_cols=112 Identities=19% Similarity=0.036 Sum_probs=82.5
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhC---CeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEc
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVG---SNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTW 128 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g---a~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~ 128 (169)
|-...++..+.......++.+|||+|||+|.+++.++..+ .+|+++|++ +.+++.+++|++.+++. +++...+.
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~--~~~i~~a~~n~~~~g~~~i~~~~~D~ 263 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLD--EKRLGLAREAALASGLSWIRFLRADA 263 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESC--HHHHHHHHHHHHHTTCTTCEEEECCG
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECC--HHHHHHHHHHHHHcCCCceEEEeCCh
Confidence 3455677777766555678899999999999999999875 699999999 67999999999999875 44433333
Q ss_pred CCCCcCCCCCCCcEEEEcCcCCCCCC---------hHHHHHHHHHhccCC
Q 030935 129 GFLDASIFDLNPNIILGADVFYDASG---------KICAFEILICSLFPI 169 (169)
Q Consensus 129 ~~~~~~~~~~~fDlIi~sd~iy~~~~---------~~~l~~~l~~~L~p~ 169 (169)
.+. ......||+|+++.+ |.... +..+++.+++.|+|+
T Consensus 264 ~~~--~~~~~~~D~Ii~npP-yg~r~~~~~~~~~~~~~~~~~~~~~Lkpg 310 (354)
T 3tma_A 264 RHL--PRFFPEVDRILANPP-HGLRLGRKEGLFHLYWDFLRGALALLPPG 310 (354)
T ss_dssp GGG--GGTCCCCSEEEECCC-SCC----CHHHHHHHHHHHHHHHHTSCTT
T ss_pred hhC--ccccCCCCEEEECCC-CcCccCCcccHHHHHHHHHHHHHHhcCCC
Confidence 322 122346899998555 43322 367899999999985
No 147
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.34 E-value=5.3e-12 Score=100.98 Aligned_cols=97 Identities=12% Similarity=0.087 Sum_probs=76.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 69 FSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
.++.+|||+|||+|..+..+++. +.+++++|++ . +++.+++++..+++..++. +..++......+..||+|+++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~--~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~D~v~~~ 239 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-S--VLEVAKENARIQGVASRYH-TIAGSAFEVDYGNDYDLVLLP 239 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-H--HHHHHHHHHHHHTCGGGEE-EEESCTTTSCCCSCEEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-H--HHHHHHHHHHhcCCCcceE-EEecccccCCCCCCCcEEEEc
Confidence 45679999999999999999887 5699999998 5 9999999998887754333 333444332233459999999
Q ss_pred CcCCCC--CChHHHHHHHHHhccCC
Q 030935 147 DVFYDA--SGKICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~--~~~~~l~~~l~~~L~p~ 169 (169)
.++|+. .....+++.+.+.|+|+
T Consensus 240 ~~l~~~~~~~~~~~l~~~~~~L~pg 264 (335)
T 2r3s_A 240 NFLHHFDVATCEQLLRKIKTALAVE 264 (335)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred chhccCCHHHHHHHHHHHHHhCCCC
Confidence 999987 44578999999999985
No 148
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.34 E-value=2.7e-12 Score=99.55 Aligned_cols=94 Identities=12% Similarity=-0.035 Sum_probs=68.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC--eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCC-CCcEEEEc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS--NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDL-NPNIILGA 146 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga--~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~-~fDlIi~s 146 (169)
++.+|||+|||+|.+++.+++.+. +|+++|++ +.+++.|++|++.|++..++. +..++..+...+. +||+|+.+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~--~~al~~A~~N~~~~gl~~~I~-v~~gD~l~~~~~~~~~D~Ivia 97 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVV--DGPFQSAQKQVRSSGLTEQID-VRKGNGLAVIEKKDAIDTIVIA 97 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESS--HHHHHHHHHHHHHTTCTTTEE-EEECSGGGGCCGGGCCCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHHHcCCCceEE-EEecchhhccCccccccEEEEe
Confidence 567999999999999999999874 79999999 579999999999999865443 4455554444433 69998864
Q ss_pred CcCCCCCChHHHHHHHHHhccC
Q 030935 147 DVFYDASGKICAFEILICSLFP 168 (169)
Q Consensus 147 d~iy~~~~~~~l~~~l~~~L~p 168 (169)
-+-- ..+..+++...+.|+|
T Consensus 98 gmGg--~lI~~IL~~~~~~L~~ 117 (244)
T 3gnl_A 98 GMGG--TLIRTILEEGAAKLAG 117 (244)
T ss_dssp EECH--HHHHHHHHHTGGGGTT
T ss_pred CCch--HHHHHHHHHHHHHhCC
Confidence 3321 1234455555555544
No 149
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.33 E-value=7.4e-12 Score=104.46 Aligned_cols=105 Identities=14% Similarity=0.099 Sum_probs=76.3
Q ss_pred HHHhccCCCCCCeEEEECCCCCHHHHHHHHh-CC-eEEEEcCCCcHHHHHHH-------HHHHHHhCCc-ceEEEEEcC-
Q 030935 61 YVWQQRYRFSGANVVELGAGTSLPGLVAAKV-GS-NVTLTDDSNRIEVLKNM-------RRVCEMNKLN-CRVMGLTWG- 129 (169)
Q Consensus 61 ~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-ga-~V~~~D~~~~~~~l~~~-------~~n~~~n~~~-~~~~~l~~~- 129 (169)
.+.+.....++.+|||||||+|.+++.+++. ++ +|+++|++ +.+++.| ++|++.+++. .++. +..+
T Consensus 233 ~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis--~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~-~i~gD 309 (433)
T 1u2z_A 233 DVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIM--DDASDLTILQYEELKKRCKLYGMRLNNVE-FSLKK 309 (433)
T ss_dssp HHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECC--HHHHHHHHHHHHHHHHHHHHTTBCCCCEE-EEESS
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCC--HHHHHHHHHhHHHHHHHHHHcCCCCCceE-EEEcC
Confidence 3444444557889999999999999999985 54 79999999 5687777 8888888743 2232 3333
Q ss_pred CCCcC--C--CCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 130 FLDAS--I--FDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 130 ~~~~~--~--~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
..... + ...+||+|+++.+++ ..+.+.+++.+.+.|+||
T Consensus 310 ~~~~~~~~~~~~~~FDvIvvn~~l~-~~d~~~~L~el~r~LKpG 352 (433)
T 1u2z_A 310 SFVDNNRVAELIPQCDVILVNNFLF-DEDLNKKVEKILQTAKVG 352 (433)
T ss_dssp CSTTCHHHHHHGGGCSEEEECCTTC-CHHHHHHHHHHHTTCCTT
T ss_pred ccccccccccccCCCCEEEEeCccc-cccHHHHHHHHHHhCCCC
Confidence 22211 1 135899999987774 467778889999999996
No 150
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.33 E-value=1.8e-12 Score=99.40 Aligned_cols=95 Identities=17% Similarity=0.163 Sum_probs=72.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC-----------
Q 030935 69 FSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS----------- 134 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~----------- 134 (169)
.++++|||+|||+|..++.+++. +.+|+++|++ +.+++.++++++.++...++. +..++....
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~g~~~~v~-~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVS--EEWTNVARKYWKENGLENKIF-LKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESC--HHHHHHHHHHHHHTTCGGGEE-EEESCHHHHHHHHHHCSSCC
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCCEE-EEECCHHHHHHHHHhhcccc
Confidence 35789999999999999999987 5699999999 579999999999888754333 223332111
Q ss_pred -----CC-C-CCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 135 -----IF-D-LNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 135 -----~~-~-~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+. + .+||+|++. +....++.+++.+.+.|+|+
T Consensus 136 ~~~~~f~~~~~~fD~I~~~---~~~~~~~~~l~~~~~~L~pg 174 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLD---ADKENYPNYYPLILKLLKPG 174 (239)
T ss_dssp GGGTTTCCSTTCEEEEEEC---SCGGGHHHHHHHHHHHEEEE
T ss_pred cccccccCCCCCcCEEEEe---CCHHHHHHHHHHHHHHcCCC
Confidence 11 1 689999986 34566778999999999985
No 151
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.33 E-value=5.1e-12 Score=96.28 Aligned_cols=96 Identities=13% Similarity=-0.019 Sum_probs=72.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC----CCCCCCcEE
Q 030935 70 SGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS----IFDLNPNII 143 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~----~~~~~fDlI 143 (169)
.+.+|||||||+|..++.+|+.. .+|+++|++ +.+++.+++|++.+++.. + .+..++.... +.+.+||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s--~~~l~~a~~~~~~~~l~n-v-~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVH--SPGVGACLASAHEEGLSN-L-RVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSC--HHHHHHHHHHHHHTTCSS-E-EEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEec--HHHHHHHHHHHHHhCCCc-E-EEEECCHHHHHHHHcCCCChheE
Confidence 56799999999999999999875 479999999 579999999999888753 2 2344443221 345699999
Q ss_pred EEc--CcCCCCCCh------HHHHHHHHHhccCC
Q 030935 144 LGA--DVFYDASGK------ICAFEILICSLFPI 169 (169)
Q Consensus 144 i~s--d~iy~~~~~------~~l~~~l~~~L~p~ 169 (169)
++. |+.+..... +.+++.+.+.|+||
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpG 143 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLG 143 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEE
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCC
Confidence 987 554433222 36999999999986
No 152
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.33 E-value=7.3e-12 Score=95.56 Aligned_cols=96 Identities=13% Similarity=0.050 Sum_probs=68.6
Q ss_pred cCCCCCCeEEEECCCCCHHHHHHHHh-C-CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc----CCCCCC
Q 030935 66 RYRFSGANVVELGAGTSLPGLVAAKV-G-SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA----SIFDLN 139 (169)
Q Consensus 66 ~~~~~~~~vLElGcGtGl~~l~~a~~-g-a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~----~~~~~~ 139 (169)
....++.+|||+|||+|..++.+++. + .+|+++|++ +.+++.+++|++.+ .++.+. .++... .....+
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s--~~~~~~a~~~~~~~-~~v~~~---~~d~~~~~~~~~~~~~ 143 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYA--PRIMRELLDACAER-ENIIPI---LGDANKPQEYANIVEK 143 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESC--HHHHHHHHHHTTTC-TTEEEE---ECCTTCGGGGTTTSCC
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECC--HHHHHHHHHHhhcC-CCeEEE---ECCCCCcccccccCcc
Confidence 33446789999999999999999987 4 599999999 57999999988755 333332 333322 112258
Q ss_pred CcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 140 PNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 140 fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
||+|+. ++ ......+.+++.+.+.|+|+
T Consensus 144 ~D~v~~-~~-~~~~~~~~~l~~~~~~Lkpg 171 (230)
T 1fbn_A 144 VDVIYE-DV-AQPNQAEILIKNAKWFLKKG 171 (230)
T ss_dssp EEEEEE-CC-CSTTHHHHHHHHHHHHEEEE
T ss_pred EEEEEE-ec-CChhHHHHHHHHHHHhCCCC
Confidence 999993 22 22233378899999999985
No 153
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.33 E-value=1.3e-11 Score=93.52 Aligned_cols=114 Identities=11% Similarity=-0.060 Sum_probs=72.6
Q ss_pred ceeecchH-HHHHHHHHhc--cCCCCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcce
Q 030935 48 GLFVWPCS-VILAEYVWQQ--RYRFSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCR 122 (169)
Q Consensus 48 g~~~W~~~-~~La~~l~~~--~~~~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~ 122 (169)
..+.|... ..++..+... ....++.+|||+|||+|..+..+++.. .+|+++|++ +.|++.+.++++.. .++.
T Consensus 32 ~y~~~~~~~~~l~~~~~~~l~~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s--~~~l~~~~~~a~~~-~~v~ 108 (210)
T 1nt2_A 32 GYREWVPWRSKLAAMILKGHRLKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYS--AKPFEKLLELVRER-NNII 108 (210)
T ss_dssp TEEECCGGGCHHHHHHHTSCCCCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCC--HHHHHHHHHHHHHC-SSEE
T ss_pred hhhhcChhHHHHHHHHHhhcccCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECC--HHHHHHHHHHHhcC-CCeE
Confidence 44556432 2344444332 223467899999999999999888864 589999999 56877666655432 1222
Q ss_pred EEEEEcCCCCcC----CCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 123 VMGLTWGFLDAS----IFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 123 ~~~l~~~~~~~~----~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+ ..++.... ....+||+|++. + ........+++.+.+.||||
T Consensus 109 ~---~~~d~~~~~~~~~~~~~fD~V~~~-~-~~~~~~~~~l~~~~r~Lkpg 154 (210)
T 1nt2_A 109 P---LLFDASKPWKYSGIVEKVDLIYQD-I-AQKNQIEILKANAEFFLKEK 154 (210)
T ss_dssp E---ECSCTTCGGGTTTTCCCEEEEEEC-C-CSTTHHHHHHHHHHHHEEEE
T ss_pred E---EEcCCCCchhhcccccceeEEEEe-c-cChhHHHHHHHHHHHHhCCC
Confidence 2 22333221 123689999986 3 33344455689999999985
No 154
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.33 E-value=4.3e-13 Score=110.80 Aligned_cols=108 Identities=16% Similarity=0.066 Sum_probs=79.4
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-C
Q 030935 56 VILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-S 134 (169)
Q Consensus 56 ~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~ 134 (169)
..+++.+.......++.+|||+|||+|..+..+++.|.+|+++|++ +.+++.++++ +.......+..+.... +
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s--~~~~~~a~~~----~~~~~~~~~~~~~~~~l~ 166 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPS--SGVAAKAREK----GIRVRTDFFEKATADDVR 166 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCC--HHHHHHHHTT----TCCEECSCCSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCC--HHHHHHHHHc----CCCcceeeechhhHhhcc
Confidence 3455555555555578899999999999999999999999999999 5699888765 3322110000000000 1
Q ss_pred CCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 135 IFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 135 ~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
..+.+||+|++..++++..+...+++.+++.|+|+
T Consensus 167 ~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~Lkpg 201 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPD 201 (416)
T ss_dssp HHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEE
T ss_pred cCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCC
Confidence 12468999999999999999999999999999985
No 155
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.33 E-value=3.7e-12 Score=93.42 Aligned_cols=92 Identities=20% Similarity=0.153 Sum_probs=71.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEc-Cc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGA-DV 148 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~s-d~ 148 (169)
++.+|||+|||+|..+..+++.+.+|+++|++ +.+++.++++.. .+.+...+.... +..+.+||+|+++ ++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~--~~~~~~a~~~~~----~~~~~~~d~~~~--~~~~~~~D~i~~~~~~ 117 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLD--PILIDYAKQDFP----EARWVVGDLSVD--QISETDFDLIVSAGNV 117 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESC--HHHHHHHHHHCT----TSEEEECCTTTS--CCCCCCEEEEEECCCC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCC--HHHHHHHHHhCC----CCcEEEcccccC--CCCCCceeEEEECCcH
Confidence 67899999999999999999999999999999 569999988763 233333333221 2334689999998 77
Q ss_pred CCCC--CChHHHHHHHHHhccCC
Q 030935 149 FYDA--SGKICAFEILICSLFPI 169 (169)
Q Consensus 149 iy~~--~~~~~l~~~l~~~L~p~ 169 (169)
+++. .....+++.+.+.|+|+
T Consensus 118 ~~~~~~~~~~~~l~~~~~~l~~~ 140 (195)
T 3cgg_A 118 MGFLAEDGREPALANIHRALGAD 140 (195)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEE
T ss_pred HhhcChHHHHHHHHHHHHHhCCC
Confidence 7765 45688999999999984
No 156
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.33 E-value=2.7e-12 Score=102.18 Aligned_cols=98 Identities=15% Similarity=-0.031 Sum_probs=71.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCeEEEEcCCCcHHHHHHHHHHHHHhC--------CcceEEEEEcCCCC--cCCC--
Q 030935 70 SGANVVELGAGTSLPGLVAAKV-GSNVTLTDDSNRIEVLKNMRRVCEMNK--------LNCRVMGLTWGFLD--ASIF-- 136 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~-ga~V~~~D~~~~~~~l~~~~~n~~~n~--------~~~~~~~l~~~~~~--~~~~-- 136 (169)
++.+|||+|||+|..+..+++. +.+|+++|++ +.+++.++++...++ ..+.+...+..... ..+.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIA--DVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCC--HHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 5679999999999999988875 4599999999 569999999887542 12333333332221 0121
Q ss_pred CCCCcEEEEcCcCCCC----CChHHHHHHHHHhccCC
Q 030935 137 DLNPNIILGADVFYDA----SGKICAFEILICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~~----~~~~~l~~~l~~~L~p~ 169 (169)
+.+||+|+++.++++. .....+++.+.+.|+|+
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg 148 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPG 148 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEE
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCC
Confidence 2489999999999876 34578999999999985
No 157
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.32 E-value=3.6e-12 Score=105.06 Aligned_cols=97 Identities=19% Similarity=0.022 Sum_probs=73.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCC-cceEEEEEcCCCCcCCC-----CCCCcE
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKL-NCRVMGLTWGFLDASIF-----DLNPNI 142 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~-~~~~~~l~~~~~~~~~~-----~~~fDl 142 (169)
++++|||+|||+|.+++.+++.|+ +|+++|++ +.+++.+++|++.|++ ..++. +..++...... ..+||+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s--~~al~~a~~n~~~ngl~~~~v~-~~~~D~~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTS--QEALDIARQNVELNKLDLSKAE-FVRDDVFKLLRTYRDRGEKFDV 296 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHTTCCGGGEE-EEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHcCCCccceE-EEECCHHHHHHHHHhcCCCCCE
Confidence 678999999999999999999876 89999999 5799999999999998 42222 33333322111 358999
Q ss_pred EEEcCcCCCC---------CChHHHHHHHHHhccCC
Q 030935 143 ILGADVFYDA---------SGKICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~iy~~---------~~~~~l~~~l~~~L~p~ 169 (169)
|++..+.+.. ..+..++..+.+.|+|+
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 332 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEG 332 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEE
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9985544332 55678888899999884
No 158
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.32 E-value=1.9e-11 Score=99.74 Aligned_cols=98 Identities=17% Similarity=0.084 Sum_probs=76.9
Q ss_pred CCCCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEE
Q 030935 67 YRFSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIIL 144 (169)
Q Consensus 67 ~~~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi 144 (169)
+..++.+|||+|||+|..+..+++.. .+++++|+ + .+++.+++++...++..++. +..++...+... .||+|+
T Consensus 199 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~--~~~~~a~~~~~~~~l~~~v~-~~~~d~~~~~p~-~~D~v~ 273 (369)
T 3gwz_A 199 DFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-P--PVAEEARELLTGRGLADRCE-ILPGDFFETIPD-GADVYL 273 (369)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H--HHHHHHHHHHHHTTCTTTEE-EEECCTTTCCCS-SCSEEE
T ss_pred CCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-H--HHHHHHHHhhhhcCcCCceE-EeccCCCCCCCC-CceEEE
Confidence 33456799999999999999998874 48999999 4 59999999998887643333 333444333333 899999
Q ss_pred EcCcCCCCCChH--HHHHHHHHhccCC
Q 030935 145 GADVFYDASGKI--CAFEILICSLFPI 169 (169)
Q Consensus 145 ~sd~iy~~~~~~--~l~~~l~~~L~p~ 169 (169)
++.++++..+.. .+++.++++|+|+
T Consensus 274 ~~~vlh~~~d~~~~~~L~~~~~~L~pg 300 (369)
T 3gwz_A 274 IKHVLHDWDDDDVVRILRRIATAMKPD 300 (369)
T ss_dssp EESCGGGSCHHHHHHHHHHHHTTCCTT
T ss_pred hhhhhccCCHHHHHHHHHHHHHHcCCC
Confidence 999999887665 7999999999996
No 159
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.32 E-value=7.9e-12 Score=95.58 Aligned_cols=103 Identities=16% Similarity=0.110 Sum_probs=74.9
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhC-CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCC
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVG-SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASI 135 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g-a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~ 135 (169)
.++..+.+.....++.+|||+|||+|..+..+++.+ .+|+++|++ +.+++.+++|++.++... + .+..++.....
T Consensus 78 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~-v-~~~~~d~~~~~ 153 (235)
T 1jg1_A 78 HMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERI--PELVEFAKRNLERAGVKN-V-HVILGDGSKGF 153 (235)
T ss_dssp HHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESC--HHHHHHHHHHHHHTTCCS-E-EEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCC--HHHHHHHHHHHHHcCCCC-c-EEEECCcccCC
Confidence 344455544445577899999999999999999876 799999999 569999999998887643 2 23344432333
Q ss_pred CC-CCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 136 FD-LNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 136 ~~-~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.. .+||+|++..++.+.. +.+.+.|+|+
T Consensus 154 ~~~~~fD~Ii~~~~~~~~~------~~~~~~L~pg 182 (235)
T 1jg1_A 154 PPKAPYDVIIVTAGAPKIP------EPLIEQLKIG 182 (235)
T ss_dssp GGGCCEEEEEECSBBSSCC------HHHHHTEEEE
T ss_pred CCCCCccEEEECCcHHHHH------HHHHHhcCCC
Confidence 32 3699999998876543 3677788874
No 160
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=6.4e-12 Score=98.69 Aligned_cols=94 Identities=15% Similarity=0.001 Sum_probs=72.9
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCC--eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEE
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKVGS--NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILG 145 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~ga--~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~ 145 (169)
..++.+|||+|||+|.+++.+++.+. +|+++|++ +.+++.+++|++.|++.. +. +..++........+||+|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s--~~av~~a~~n~~~n~l~~-~~-~~~~d~~~~~~~~~~D~Vi~ 192 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKN--PTAYHYLCENIKLNKLNN-VI-PILADNRDVELKDVADRVIM 192 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECC--HHHHHHHHHHHHHTTCSS-EE-EEESCGGGCCCTTCEEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCC-EE-EEECChHHcCccCCceEEEE
Confidence 34678999999999999999999854 99999999 679999999999998753 22 33444433211458999998
Q ss_pred cCcCCCCCChHHHHHHHHHhccCC
Q 030935 146 ADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 146 sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
..+. ....+++.+.+.|+|+
T Consensus 193 d~p~----~~~~~l~~~~~~Lkpg 212 (272)
T 3a27_A 193 GYVH----KTHKFLDKTFEFLKDR 212 (272)
T ss_dssp CCCS----SGGGGHHHHHHHEEEE
T ss_pred CCcc----cHHHHHHHHHHHcCCC
Confidence 6543 6778888888999884
No 161
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.32 E-value=8.1e-12 Score=93.82 Aligned_cols=93 Identities=22% Similarity=0.093 Sum_probs=71.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCCCCCcEEE
Q 030935 70 SGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFDLNPNIIL 144 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~~~fDlIi 144 (169)
++++|||+|||+|..++.+++. +.+|+++|++ +.+++.+++|++.+++..++. +..++... +..+. ||+|+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~-fD~v~ 131 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPD--RDNVEHARRMLHDNGLIDRVE-LQVGDPLGIAAGQRD-IDILF 131 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESC--HHHHHHHHHHHHHHSGGGGEE-EEESCHHHHHTTCCS-EEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHCCCCceEE-EEEecHHHHhccCCC-CCEEE
Confidence 5679999999999999999886 5699999999 579999999999887753333 22333221 22234 99999
Q ss_pred EcCcCCCCCChHHHHHHHHHhccCC
Q 030935 145 GADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 145 ~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+. ........+++.+.+.|+|+
T Consensus 132 ~~---~~~~~~~~~l~~~~~~Lkpg 153 (210)
T 3c3p_A 132 MD---CDVFNGADVLERMNRCLAKN 153 (210)
T ss_dssp EE---TTTSCHHHHHHHHGGGEEEE
T ss_pred Ec---CChhhhHHHHHHHHHhcCCC
Confidence 75 33567899999999999985
No 162
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.31 E-value=3.2e-12 Score=105.21 Aligned_cols=98 Identities=18% Similarity=-0.001 Sum_probs=70.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcc-eEEEEEcCCCCcCC-----CCCCCc
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNC-RVMGLTWGFLDASI-----FDLNPN 141 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~-~~~~l~~~~~~~~~-----~~~~fD 141 (169)
.++++|||+|||+|.+++.+|+.|+ +|+++|+++. +++.+++|++.|++.. ++. +..++..... ...+||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~--al~~A~~N~~~n~~~~~~v~-~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKR--SRALSLAHFEANHLDMANHQ-LVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTT--HHHHHHHHHHHTTCCCTTEE-EEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHH--HHHHHHHHHHHcCCCccceE-EEECCHHHHHHHHHHhCCCcc
Confidence 3678999999999999999999887 8999999964 9999999999998852 222 3334432211 134899
Q ss_pred EEEEcCcCCC-----CC----ChHHHHHHHHHhccCC
Q 030935 142 IILGADVFYD-----AS----GKICAFEILICSLFPI 169 (169)
Q Consensus 142 lIi~sd~iy~-----~~----~~~~l~~~l~~~L~p~ 169 (169)
+|++..+.+. .. .+..+++.+.+.|+|+
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pg 324 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN 324 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCC
Confidence 9998554432 11 2344666778888874
No 163
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.31 E-value=1.1e-11 Score=95.61 Aligned_cols=119 Identities=11% Similarity=0.016 Sum_probs=85.2
Q ss_pred CcceeecchHH-HHHHHHHhc---cCCCCCCeEEEECCCCCHHHHHHHHh-CC--eEEEEcCCCcHHHHHHHHHHHHHhC
Q 030935 46 EYGLFVWPCSV-ILAEYVWQQ---RYRFSGANVVELGAGTSLPGLVAAKV-GS--NVTLTDDSNRIEVLKNMRRVCEMNK 118 (169)
Q Consensus 46 ~~g~~~W~~~~-~La~~l~~~---~~~~~~~~vLElGcGtGl~~l~~a~~-ga--~V~~~D~~~~~~~l~~~~~n~~~n~ 118 (169)
+...+.|.--. .||.-+... ....+|.+|||||||+|..+..+|+. |. +|+++|++ ++|++.++++++..+
T Consensus 49 ~~e~r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s--~~~~~~l~~~a~~~~ 126 (233)
T 4df3_A 49 GEEYREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFA--PRVMRDLLTVVRDRR 126 (233)
T ss_dssp TEEEEECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECC--HHHHHHHHHHSTTCT
T ss_pred CceeeeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCC--HHHHHHHHHhhHhhc
Confidence 35789998754 566666543 44568999999999999999999985 43 89999999 679999988876543
Q ss_pred CcceEEEEEcCCCCc-CCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 119 LNCRVMGLTWGFLDA-SIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 119 ~~~~~~~l~~~~~~~-~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
++.....+...... ......+|+|++ | ++++.+.+.+++.+++.|||+
T Consensus 127 -ni~~V~~d~~~p~~~~~~~~~vDvVf~-d-~~~~~~~~~~l~~~~r~LKpG 175 (233)
T 4df3_A 127 -NIFPILGDARFPEKYRHLVEGVDGLYA-D-VAQPEQAAIVVRNARFFLRDG 175 (233)
T ss_dssp -TEEEEESCTTCGGGGTTTCCCEEEEEE-C-CCCTTHHHHHHHHHHHHEEEE
T ss_pred -CeeEEEEeccCccccccccceEEEEEE-e-ccCChhHHHHHHHHHHhccCC
Confidence 22222233333221 223458999986 4 455677788999999999985
No 164
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.31 E-value=1.2e-12 Score=102.96 Aligned_cols=99 Identities=17% Similarity=0.119 Sum_probs=69.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHHHHHHHh-----------------CCc----------
Q 030935 69 FSGANVVELGAGTSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMRRVCEMN-----------------KLN---------- 120 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~~n~~~n-----------------~~~---------- 120 (169)
.++.+|||||||+|..++.+++ .+.+|+++|++ +.|++.++++++.. +..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFL--EVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSC--HHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCC--HHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 3678999999999996665555 36699999999 56999988865421 100
Q ss_pred -ceEEEEEcCCCCc--C-----CCCCCCcEEEEcCcCCC----CCChHHHHHHHHHhccCC
Q 030935 121 -CRVMGLTWGFLDA--S-----IFDLNPNIILGADVFYD----ASGKICAFEILICSLFPI 169 (169)
Q Consensus 121 -~~~~~l~~~~~~~--~-----~~~~~fDlIi~sd~iy~----~~~~~~l~~~l~~~L~p~ 169 (169)
..+..+...+... + ..+.+||+|+++.++++ ..++..+++.+.+.||||
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpG 208 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPG 208 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEE
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCC
Confidence 0011122223222 1 22346999999999988 557899999999999996
No 165
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.31 E-value=2.6e-11 Score=98.27 Aligned_cols=98 Identities=8% Similarity=-0.014 Sum_probs=76.4
Q ss_pred CCCCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEE
Q 030935 67 YRFSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIIL 144 (169)
Q Consensus 67 ~~~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi 144 (169)
...++.+|||+|||+|..+..+++.. .+++++|+ +. +++.++++++.+++..++. +..++......+ .+|+|+
T Consensus 187 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~--~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~-~~D~v~ 261 (359)
T 1x19_A 187 KLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PG--AIDLVNENAAEKGVADRMR-GIAVDIYKESYP-EADAVL 261 (359)
T ss_dssp CCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GG--GHHHHHHHHHHTTCTTTEE-EEECCTTTSCCC-CCSEEE
T ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HH--HHHHHHHHHHhcCCCCCEE-EEeCccccCCCC-CCCEEE
Confidence 34467799999999999999999874 49999999 64 9999999998887653332 333444332222 449999
Q ss_pred EcCcCCCCCC--hHHHHHHHHHhccCC
Q 030935 145 GADVFYDASG--KICAFEILICSLFPI 169 (169)
Q Consensus 145 ~sd~iy~~~~--~~~l~~~l~~~L~p~ 169 (169)
++.++++..+ ...+++.+.+.|+|+
T Consensus 262 ~~~vlh~~~d~~~~~~l~~~~~~L~pg 288 (359)
T 1x19_A 262 FCRILYSANEQLSTIMCKKAFDAMRSG 288 (359)
T ss_dssp EESCGGGSCHHHHHHHHHHHHTTCCTT
T ss_pred EechhccCCHHHHHHHHHHHHHhcCCC
Confidence 9999998776 788999999999996
No 166
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.30 E-value=1.4e-11 Score=100.12 Aligned_cols=96 Identities=18% Similarity=0.084 Sum_probs=75.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
.++.+|||+|||+|..+..+++.. .+++++|+ + .+++.+++++..+++..++. +..++..... +..||+|+++
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~--~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~-~~~~D~v~~~ 255 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-A--GPAERARRRFADAGLADRVT-VAEGDFFKPL-PVTADVVLLS 255 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H--HHHHHHHHHHHHTTCTTTEE-EEECCTTSCC-SCCEEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-H--HHHHHHHHHHHhcCCCCceE-EEeCCCCCcC-CCCCCEEEEe
Confidence 456799999999999999999874 58999999 5 49999999998887653332 3334443332 3359999999
Q ss_pred CcCCCCCChH--HHHHHHHHhccCC
Q 030935 147 DVFYDASGKI--CAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~~~~--~l~~~l~~~L~p~ 169 (169)
.++++..+.. .+++.+.+.|+|+
T Consensus 256 ~vl~~~~~~~~~~~l~~~~~~L~pg 280 (374)
T 1qzz_A 256 FVLLNWSDEDALTILRGCVRALEPG 280 (374)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCC
Confidence 9998876654 8999999999985
No 167
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.29 E-value=6.1e-12 Score=96.76 Aligned_cols=94 Identities=13% Similarity=-0.021 Sum_probs=72.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc---CC-----CCC
Q 030935 70 SGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA---SI-----FDL 138 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~---~~-----~~~ 138 (169)
++++|||+|||+|..++.+++. +.+|+++|++ +.+++.+++|++.+++..++. +..++... .. ...
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~--~~~~~~a~~~~~~~g~~~~i~-~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFD--REAYEIGLPFIRKAGVEHKIN-FIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESC--HHHHHHHHHHHHHTTCGGGEE-EEESCHHHHHHHHHHSTTCTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEE-EEEcCHHHHHHHHHhccCCCC
Confidence 5679999999999999999986 5699999999 579999999999888754333 33343322 11 145
Q ss_pred CCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 139 NPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 139 ~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+||+|++. .....+..+++.+.+.|+||
T Consensus 147 ~fD~I~~d---~~~~~~~~~l~~~~~~L~pG 174 (237)
T 3c3y_A 147 SYDFGFVD---ADKPNYIKYHERLMKLVKVG 174 (237)
T ss_dssp CEEEEEEC---SCGGGHHHHHHHHHHHEEEE
T ss_pred CcCEEEEC---CchHHHHHHHHHHHHhcCCC
Confidence 89999974 23456789999999999985
No 168
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.28 E-value=1.3e-11 Score=93.60 Aligned_cols=116 Identities=12% Similarity=0.043 Sum_probs=76.2
Q ss_pred eeecc-hHHHHHHHHHh---ccCCCCCCeEEEECCCCCHHHHHHHHh-C--CeEEEEcCCCcHHHHHHHHHHHHHhCCcc
Q 030935 49 LFVWP-CSVILAEYVWQ---QRYRFSGANVVELGAGTSLPGLVAAKV-G--SNVTLTDDSNRIEVLKNMRRVCEMNKLNC 121 (169)
Q Consensus 49 ~~~W~-~~~~La~~l~~---~~~~~~~~~vLElGcGtGl~~l~~a~~-g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~ 121 (169)
.+.|. ....++..+.. .....++.+|||+|||+|..++.+++. | .+|+++|++ +.+++.+++|++.+ .++
T Consensus 48 ~~~~~p~~~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~~~~~~~~~~-~~v 124 (227)
T 1g8a_A 48 YRIWNPNRSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFS--PRVLRELVPIVEER-RNI 124 (227)
T ss_dssp EEECCTTTCHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESC--HHHHHHHHHHHSSC-TTE
T ss_pred EEEeCCCchhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECC--HHHHHHHHHHHhcc-CCC
Confidence 34543 33444455532 233446789999999999999999976 4 589999999 56999999988765 333
Q ss_pred eEEEEEcCCCCc-CCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 122 RVMGLTWGFLDA-SIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 122 ~~~~l~~~~~~~-~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.+...+..+... ...+.+||+|++..+ .......+++.+.+.|+|+
T Consensus 125 ~~~~~d~~~~~~~~~~~~~~D~v~~~~~--~~~~~~~~l~~~~~~Lkpg 171 (227)
T 1g8a_A 125 VPILGDATKPEEYRALVPKVDVIFEDVA--QPTQAKILIDNAEVYLKRG 171 (227)
T ss_dssp EEEECCTTCGGGGTTTCCCEEEEEECCC--STTHHHHHHHHHHHHEEEE
T ss_pred EEEEccCCCcchhhcccCCceEEEECCC--CHhHHHHHHHHHHHhcCCC
Confidence 333333222110 112348999997443 3333345599999999985
No 169
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.28 E-value=5.4e-12 Score=95.72 Aligned_cols=95 Identities=12% Similarity=0.046 Sum_probs=71.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC---CC----CC
Q 030935 69 FSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS---IF----DL 138 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~---~~----~~ 138 (169)
.++++|||+|||+|..++.+++. +.+|+++|+++ .+++.+++|++.++...++. +..++.... .. ..
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~g~~~~i~-~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDA--QPPELGRPLWRQAEAEHKID-LRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCS--HHHHHHHHHHHHTTCTTTEE-EEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHHCCCCCeEE-EEEcCHHHHHHHHHhcCCCC
Confidence 46789999999999999999985 56999999995 59999999999888743332 223332211 11 15
Q ss_pred CCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 139 NPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 139 ~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+||+|++... ...+..+++.+.+.|+|+
T Consensus 145 ~~D~v~~d~~---~~~~~~~l~~~~~~L~pg 172 (229)
T 2avd_A 145 TFDVAVVDAD---KENCSAYYERCLQLLRPG 172 (229)
T ss_dssp CEEEEEECSC---STTHHHHHHHHHHHEEEE
T ss_pred CccEEEECCC---HHHHHHHHHHHHHHcCCC
Confidence 8999998433 556788999999999985
No 170
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.28 E-value=3.2e-11 Score=100.60 Aligned_cols=106 Identities=10% Similarity=-0.031 Sum_probs=76.5
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcCCCC
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWGFLD 132 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~~~~ 132 (169)
.+..+.+++.+.....++.+|||+|||+|.+++.+++.+.+|+++|++ +.+++.+++|++.|++. +.+...++.+..
T Consensus 270 ~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s--~~al~~A~~n~~~~~~~~v~f~~~d~~~~l 347 (433)
T 1uwv_A 270 VNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGV--PALVEKGQQNARLNGLQNVTFYHENLEEDV 347 (433)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESC--HHHHHHHHHHHHHTTCCSEEEEECCTTSCC
T ss_pred HHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCC--HHHHHHHHHHHHHcCCCceEEEECCHHHHh
Confidence 466677777665555567899999999999999999998899999999 57999999999999875 444433333321
Q ss_pred cC--CCCCCCcEEEEcCcCCCCCChHHHHHHHHH
Q 030935 133 AS--IFDLNPNIILGADVFYDASGKICAFEILIC 164 (169)
Q Consensus 133 ~~--~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~ 164 (169)
.. ....+||+|++ |+-|... ..+++.+..
T Consensus 348 ~~~~~~~~~fD~Vv~-dPPr~g~--~~~~~~l~~ 378 (433)
T 1uwv_A 348 TKQPWAKNGFDKVLL-DPARAGA--AGVMQQIIK 378 (433)
T ss_dssp SSSGGGTTCCSEEEE-CCCTTCC--HHHHHHHHH
T ss_pred hhhhhhcCCCCEEEE-CCCCccH--HHHHHHHHh
Confidence 11 22358999997 5656433 356666554
No 171
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.28 E-value=7.9e-11 Score=98.11 Aligned_cols=105 Identities=17% Similarity=0.066 Sum_probs=76.1
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCC
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLD 132 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~ 132 (169)
..+..|.+++.. ..++.+|||+|||+|.+++.+++.+.+|+++|++ +.+++.+++|++.|++.++ +..++..
T Consensus 276 ~~~e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s--~~ai~~A~~n~~~ngl~v~---~~~~d~~ 347 (425)
T 2jjq_A 276 YQAVNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSN--EFAIEMARRNVEINNVDAE---FEVASDR 347 (425)
T ss_dssp HHHHHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHTCCEE---EEECCTT
T ss_pred HHHHHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHHcCCcEE---EEECChH
Confidence 345566666655 3367799999999999999999998899999999 5799999999999988733 4444443
Q ss_pred cCCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 133 ASIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 133 ~~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.... .+||+|++. +.+. ...+.+++.+.. |+|+
T Consensus 348 ~~~~-~~fD~Vv~d-PPr~-g~~~~~~~~l~~-l~p~ 380 (425)
T 2jjq_A 348 EVSV-KGFDTVIVD-PPRA-GLHPRLVKRLNR-EKPG 380 (425)
T ss_dssp TCCC-TTCSEEEEC-CCTT-CSCHHHHHHHHH-HCCS
T ss_pred HcCc-cCCCEEEEc-CCcc-chHHHHHHHHHh-cCCC
Confidence 3222 289999984 4442 333456666653 6664
No 172
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.28 E-value=2.3e-11 Score=97.51 Aligned_cols=95 Identities=13% Similarity=-0.027 Sum_probs=74.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGAD 147 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd 147 (169)
+..+|||+|||+|..+..+++.. .+++++|+ + .+++.+++++...++..++. +..++...+.. ..||+|+++.
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~--~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~p-~~~D~v~~~~ 243 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-Q--GPASAAHRRFLDTGLSGRAQ-VVVGSFFDPLP-AGAGGYVLSA 243 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H--HHHHHHHHHHHHTTCTTTEE-EEECCTTSCCC-CSCSEEEEES
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-H--HHHHHHHHhhhhcCcCcCeE-EecCCCCCCCC-CCCcEEEEeh
Confidence 45799999999999999988854 48999999 4 59999999998877653332 33344433332 3899999999
Q ss_pred cCCCCCC--hHHHHHHHHHhccCC
Q 030935 148 VFYDASG--KICAFEILICSLFPI 169 (169)
Q Consensus 148 ~iy~~~~--~~~l~~~l~~~L~p~ 169 (169)
++|+..+ ...+++.++++|+|+
T Consensus 244 vlh~~~~~~~~~~l~~~~~~L~pg 267 (332)
T 3i53_A 244 VLHDWDDLSAVAILRRCAEAAGSG 267 (332)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHTTT
T ss_pred hhccCCHHHHHHHHHHHHHhcCCC
Confidence 9998776 488999999999996
No 173
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.27 E-value=2.2e-11 Score=98.25 Aligned_cols=98 Identities=12% Similarity=-0.003 Sum_probs=76.8
Q ss_pred CCC-CCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCC--CCCCCcE
Q 030935 68 RFS-GANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASI--FDLNPNI 142 (169)
Q Consensus 68 ~~~-~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~--~~~~fDl 142 (169)
..+ +.+|||+|||+|..+..+++. +.+++++|+ + .+++.+++++...+...++. +..++..... .+..||+
T Consensus 176 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~--~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~~~D~ 251 (352)
T 3mcz_A 176 VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-P--TTRDAARKTIHAHDLGGRVE-FFEKNLLDARNFEGGAADV 251 (352)
T ss_dssp GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-G--GGHHHHHHHHHHTTCGGGEE-EEECCTTCGGGGTTCCEEE
T ss_pred CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-H--HHHHHHHHHHHhcCCCCceE-EEeCCcccCcccCCCCccE
Confidence 334 789999999999999999887 348999999 4 39999999998887754433 3344443332 4557999
Q ss_pred EEEcCcCCCCCC--hHHHHHHHHHhccCC
Q 030935 143 ILGADVFYDASG--KICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~iy~~~~--~~~l~~~l~~~L~p~ 169 (169)
|+++.++++..+ ...+++.++++|+|+
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pg 280 (352)
T 3mcz_A 252 VMLNDCLHYFDAREAREVIGHAAGLVKPG 280 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEE
T ss_pred EEEecccccCCHHHHHHHHHHHHHHcCCC
Confidence 999999997765 488999999999985
No 174
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.27 E-value=2.6e-11 Score=98.16 Aligned_cols=96 Identities=15% Similarity=0.095 Sum_probs=74.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
.++.+|||+|||+|..+..+++.+ .+++++|+ +. +++.+++|+..+++..++. +..++..... +..||+|+++
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~--~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~-~~~~D~v~~~ 256 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AG--TVDTARSYLKDEGLSDRVD-VVEGDFFEPL-PRKADAIILS 256 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TT--HHHHHHHHHHHTTCTTTEE-EEECCTTSCC-SSCEEEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HH--HHHHHHHHHHhcCCCCceE-EEeCCCCCCC-CCCccEEEEc
Confidence 456799999999999999999875 47899998 54 9999999998887743322 3334443332 3359999999
Q ss_pred CcCCCCCCh--HHHHHHHHHhccCC
Q 030935 147 DVFYDASGK--ICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~~~--~~l~~~l~~~L~p~ 169 (169)
.++++..+. ..+++.+.+.|+|+
T Consensus 257 ~vl~~~~~~~~~~~l~~~~~~L~pg 281 (360)
T 1tw3_A 257 FVLLNWPDHDAVRILTRCAEALEPG 281 (360)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCC
Confidence 999877655 58999999999985
No 175
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.27 E-value=3.4e-11 Score=93.94 Aligned_cols=102 Identities=17% Similarity=0.068 Sum_probs=74.2
Q ss_pred HHHHhccCCCCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHh-C-CcceEEEEEcCCCCcC
Q 030935 60 EYVWQQRYRFSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMN-K-LNCRVMGLTWGFLDAS 134 (169)
Q Consensus 60 ~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n-~-~~~~~~~l~~~~~~~~ 134 (169)
.++.......++.+|||+|||+|.+++.+++. +.+|+++|++ +.+++.+++|++.+ + +..++. +..++....
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~g~~~~~v~-~~~~d~~~~ 165 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQR--ADHAEHARRNVSGCYGQPPDNWR-LVVSDLADS 165 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSC--HHHHHHHHHHHHHHHTSCCTTEE-EECSCGGGC
T ss_pred HHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCC--HHHHHHHHHHHHHhcCCCCCcEE-EEECchHhc
Confidence 34444444557889999999999999999985 5699999999 57999999999887 4 221222 333443332
Q ss_pred -CCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 135 -IFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 135 -~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
..+.+||+|++. ..+...+++.+.+.|+|+
T Consensus 166 ~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~pg 196 (280)
T 1i9g_A 166 ELPDGSVDRAVLD-----MLAPWEVLDAVSRLLVAG 196 (280)
T ss_dssp CCCTTCEEEEEEE-----SSCGGGGHHHHHHHEEEE
T ss_pred CCCCCceeEEEEC-----CcCHHHHHHHHHHhCCCC
Confidence 234589999982 346668899999999885
No 176
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.27 E-value=4.1e-11 Score=98.01 Aligned_cols=96 Identities=9% Similarity=-0.002 Sum_probs=74.3
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCC--eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC---CCCCcE
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKVGS--NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF---DLNPNI 142 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~ga--~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~---~~~fDl 142 (169)
..++++|||+| |+|.+++.+++.+. +|+++|++ +.+++.+++|++.+++. ++. +..++....+. +.+||+
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~--~~~l~~a~~~~~~~g~~-~v~-~~~~D~~~~l~~~~~~~fD~ 244 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDID--ERLTKFIEKAANEIGYE-DIE-IFTFDLRKPLPDYALHKFDT 244 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSC--HHHHHHHHHHHHHHTCC-CEE-EECCCTTSCCCTTTSSCBSE
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHHHcCCC-CEE-EEEChhhhhchhhccCCccE
Confidence 34688999999 99999999999875 89999999 57999999999999874 322 44455443222 348999
Q ss_pred EEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 143 ILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
|+++.+ |.......+++.+.+.|+|+
T Consensus 245 Vi~~~p-~~~~~~~~~l~~~~~~Lkpg 270 (373)
T 2qm3_A 245 FITDPP-ETLEAIRAFVGRGIATLKGP 270 (373)
T ss_dssp EEECCC-SSHHHHHHHHHHHHHTBCST
T ss_pred EEECCC-CchHHHHHHHHHHHHHcccC
Confidence 998654 43334688999999999995
No 177
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.27 E-value=1.4e-11 Score=99.19 Aligned_cols=101 Identities=13% Similarity=0.069 Sum_probs=68.8
Q ss_pred HHHhccCCCCCCeEEEECCCCCHHHHHHHHh-C--CeEEEEcCCCcHHHHHHHHHHHHHh-------CCc---ceEEEEE
Q 030935 61 YVWQQRYRFSGANVVELGAGTSLPGLVAAKV-G--SNVTLTDDSNRIEVLKNMRRVCEMN-------KLN---CRVMGLT 127 (169)
Q Consensus 61 ~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-g--a~V~~~D~~~~~~~l~~~~~n~~~n-------~~~---~~~~~l~ 127 (169)
++.......++.+|||+|||+|.+++.+++. | .+|+++|++ +.+++.+++|+... ++. .++ .+.
T Consensus 96 ~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v-~~~ 172 (336)
T 2b25_A 96 MILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVR--KDHHDLAKKNYKHWRDSWKLSHVEEWPDNV-DFI 172 (336)
T ss_dssp HHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESS--HHHHHHHHHHHHHHHHHHTTTCSSCCCCCE-EEE
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCC--HHHHHHHHHHHHHhhcccccccccccCCce-EEE
Confidence 3333334567889999999999999999986 5 589999999 57999999999853 221 122 233
Q ss_pred cCCCCcC---CCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 128 WGFLDAS---IFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 128 ~~~~~~~---~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.++.... ..+.+||+|++... ....+++.+.+.|+|+
T Consensus 173 ~~d~~~~~~~~~~~~fD~V~~~~~-----~~~~~l~~~~~~Lkpg 212 (336)
T 2b25_A 173 HKDISGATEDIKSLTFDAVALDML-----NPHVTLPVFYPHLKHG 212 (336)
T ss_dssp ESCTTCCC-------EEEEEECSS-----STTTTHHHHGGGEEEE
T ss_pred ECChHHcccccCCCCeeEEEECCC-----CHHHHHHHHHHhcCCC
Confidence 4444332 23347999998432 3344788899999885
No 178
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.27 E-value=2.4e-11 Score=92.68 Aligned_cols=95 Identities=13% Similarity=-0.025 Sum_probs=68.0
Q ss_pred CCCCCCeEEEECCCCCHHHHHHHHh-C--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC----CCCCC
Q 030935 67 YRFSGANVVELGAGTSLPGLVAAKV-G--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS----IFDLN 139 (169)
Q Consensus 67 ~~~~~~~vLElGcGtGl~~l~~a~~-g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~----~~~~~ 139 (169)
...++.+|||+|||+|.++..+++. | .+|+++|++ +.+++.+.++++.+ ..+. +..++.... ....+
T Consensus 74 ~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s--~~~i~~~~~~a~~~-~~v~---~~~~d~~~~~~~~~~~~~ 147 (233)
T 2ipx_A 74 HIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFS--HRSGRDLINLAKKR-TNII---PVIEDARHPHKYRMLIAM 147 (233)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCC--HHHHHHHHHHHHHC-TTEE---EECSCTTCGGGGGGGCCC
T ss_pred cCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECC--HHHHHHHHHHhhcc-CCeE---EEEcccCChhhhcccCCc
Confidence 3446789999999999999999886 3 589999999 56888888877765 2233 333443321 13458
Q ss_pred CcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 140 PNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 140 fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
||+|++..+ .......+++.+.+.|+|+
T Consensus 148 ~D~V~~~~~--~~~~~~~~~~~~~~~Lkpg 175 (233)
T 2ipx_A 148 VDVIFADVA--QPDQTRIVALNAHTFLRNG 175 (233)
T ss_dssp EEEEEECCC--CTTHHHHHHHHHHHHEEEE
T ss_pred EEEEEEcCC--CccHHHHHHHHHHHHcCCC
Confidence 999998433 3344456788899999985
No 179
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.27 E-value=1e-12 Score=101.55 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=72.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCC--C-----CC
Q 030935 69 FSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASI--F-----DL 138 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~--~-----~~ 138 (169)
.++++|||+|||+|..++.+++. +++|+++|+++. +++.+++|++.+++..++. +..++..+.. . ..
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~--~~~~a~~~~~~~g~~~~i~-~~~gda~~~l~~~~~~~~~~ 135 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEG--WTKHAHPYWREAKQEHKIK-LRLGPALDTLHSLLNEGGEH 135 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCS--SCCCSHHHHHHTTCTTTEE-EEESCHHHHHHHHHHHHCSS
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHH--HHHHHHHHHHHcCCCCcEE-EEEcCHHHHHHHHhhccCCC
Confidence 35679999999999999999984 569999999965 9999999999988754333 3334432211 1 36
Q ss_pred CCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 139 NPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 139 ~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+||+|++... ...+..+++.+.+.|+||
T Consensus 136 ~fD~V~~d~~---~~~~~~~l~~~~~~LkpG 163 (242)
T 3r3h_A 136 QFDFIFIDAD---KTNYLNYYELALKLVTPK 163 (242)
T ss_dssp CEEEEEEESC---GGGHHHHHHHHHHHEEEE
T ss_pred CEeEEEEcCC---hHHhHHHHHHHHHhcCCC
Confidence 8999997532 566788999999999985
No 180
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.27 E-value=3e-11 Score=100.08 Aligned_cols=112 Identities=12% Similarity=0.003 Sum_probs=77.9
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-CC-eEEEEcCCCcHHHHHHHHHHHH-------HhCCcceEEE
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-GS-NVTLTDDSNRIEVLKNMRRVCE-------MNKLNCRVMG 125 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-ga-~V~~~D~~~~~~~l~~~~~n~~-------~n~~~~~~~~ 125 (169)
...+...+.......++.+|||||||+|.+.+.+|+. ++ +|+++|++ +.+++.|++|++ .+++...-..
T Consensus 158 ~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS--~~~lelAr~n~e~frkr~~~~Gl~~~rVe 235 (438)
T 3uwp_A 158 SFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKA--DIPAKYAETMDREFRKWMKWYGKKHAEYT 235 (438)
T ss_dssp HHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECC--HHHHHHHHHHHHHHHHHHHHHTBCCCEEE
T ss_pred CHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCC--HHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 3333444444445567889999999999999988864 66 59999999 569988887653 3454211233
Q ss_pred EEcCCCCcCCCC---CCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 126 LTWGFLDASIFD---LNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 126 l~~~~~~~~~~~---~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+..+++...... ..||+|+++.++| ..+....++.+.+.|+||
T Consensus 236 fi~GD~~~lp~~d~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPG 281 (438)
T 3uwp_A 236 LERGDFLSEEWRERIANTSVIFVNNFAF-GPEVDHQLKERFANMKEG 281 (438)
T ss_dssp EEECCTTSHHHHHHHHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTT
T ss_pred EEECcccCCccccccCCccEEEEccccc-CchHHHHHHHHHHcCCCC
Confidence 556665432221 3799999987654 567777778889999997
No 181
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.26 E-value=2.7e-11 Score=97.10 Aligned_cols=93 Identities=15% Similarity=0.033 Sum_probs=72.6
Q ss_pred CeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcC
Q 030935 72 ANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVF 149 (169)
Q Consensus 72 ~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~i 149 (169)
.+|||+|||+|..+..+++. +.+++++|+ +. +++.+++++..+++..++. +..++...+ .+.+||+|++..++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~--~~~~a~~~~~~~~~~~~v~-~~~~d~~~~-~~~~~D~v~~~~vl 243 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EG--SLGVARDNLSSLLAGERVS-LVGGDMLQE-VPSNGDIYLLSRII 243 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TT--CTHHHHHHTHHHHHTTSEE-EEESCTTTC-CCSSCSEEEEESCG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HH--HHHHHHHHHhhcCCCCcEE-EecCCCCCC-CCCCCCEEEEchhc
Confidence 89999999999999999887 458999999 64 9999999887665432222 333444333 33579999999999
Q ss_pred CCCCChH--HHHHHHHHhccCC
Q 030935 150 YDASGKI--CAFEILICSLFPI 169 (169)
Q Consensus 150 y~~~~~~--~l~~~l~~~L~p~ 169 (169)
++..+.. .+++.+.+.|+|+
T Consensus 244 ~~~~~~~~~~~l~~~~~~L~pg 265 (334)
T 2ip2_A 244 GDLDEAASLRLLGNCREAMAGD 265 (334)
T ss_dssp GGCCHHHHHHHHHHHHHHSCTT
T ss_pred cCCCHHHHHHHHHHHHHhcCCC
Confidence 8665544 9999999999996
No 182
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.26 E-value=4.1e-11 Score=89.19 Aligned_cols=88 Identities=14% Similarity=0.152 Sum_probs=62.2
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
..++.+|||+|||+|.+++.+++.+. +|+++|++ +.+++.+++|+. .+++...+..+ .+.+||+|+++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~--~~~~~~a~~~~~----~~~~~~~d~~~-----~~~~~D~v~~~ 117 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDID--PDAIETAKRNCG----GVNFMVADVSE-----ISGKYDTWIMN 117 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESC--HHHHHHHHHHCT----TSEEEECCGGG-----CCCCEEEEEEC
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECC--HHHHHHHHHhcC----CCEEEECcHHH-----CCCCeeEEEEC
Confidence 44678999999999999999999876 79999999 569999999876 33433333322 13689999998
Q ss_pred CcCCCCCC--hHHHHHHHHHhc
Q 030935 147 DVFYDASG--KICAFEILICSL 166 (169)
Q Consensus 147 d~iy~~~~--~~~l~~~l~~~L 166 (169)
.++++... ...+++.+.+.|
T Consensus 118 ~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 118 PPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp CCC-------CHHHHHHHHHHE
T ss_pred CCchhccCchhHHHHHHHHHhc
Confidence 88776543 345666665544
No 183
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.26 E-value=1.6e-11 Score=100.82 Aligned_cols=96 Identities=13% Similarity=-0.064 Sum_probs=72.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC-----CCCCcEEE
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF-----DLNPNIIL 144 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~-----~~~fDlIi 144 (169)
++.+|||+|||+|.+++.+++.+.+|+++|++ +.+++.+++|++.|++.. ..+..++...... ..+||+|+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s--~~~~~~a~~n~~~n~~~~--~~~~~~d~~~~~~~~~~~~~~fD~Ii 284 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSS--AEALRRAEENARLNGLGN--VRVLEANAFDLLRRLEKEGERFDLVV 284 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESC--HHHHHHHHHHHHHTTCTT--EEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECC--HHHHHHHHHHHHHcCCCC--ceEEECCHHHHHHHHHhcCCCeeEEE
Confidence 67899999999999999999986689999999 579999999999999863 2233444322111 45899999
Q ss_pred EcCcCCCC---------CChHHHHHHHHHhccCC
Q 030935 145 GADVFYDA---------SGKICAFEILICSLFPI 169 (169)
Q Consensus 145 ~sd~iy~~---------~~~~~l~~~l~~~L~p~ 169 (169)
+..+.|.. ..+..+++.+.+.|+|+
T Consensus 285 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 318 (382)
T 1wxx_A 285 LDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG 318 (382)
T ss_dssp ECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 84443332 23567888888888885
No 184
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.25 E-value=6.7e-12 Score=96.13 Aligned_cols=94 Identities=14% Similarity=0.061 Sum_probs=71.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc---CC--CC--CC
Q 030935 70 SGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA---SI--FD--LN 139 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~---~~--~~--~~ 139 (169)
++++|||+|||+|..++.+++. +.+|+++|++ +.+++.+++|++.+++..++. +..++..+ .. .+ .+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~--~~~~~~a~~~~~~~g~~~~i~-~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQD--PNATAIAKKYWQKAGVAEKIS-LRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC--HHHHHHHHHHHHHHTCGGGEE-EEESCHHHHHHHHHTSSSCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEE-EEEcCHHHHHHHHHhcCCCCC
Confidence 5679999999999999999985 4599999999 579999999999888754333 33343211 11 11 58
Q ss_pred CcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 140 PNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 140 fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
||+|++... ...+..+++.+.+.|+|+
T Consensus 149 fD~V~~d~~---~~~~~~~l~~~~~~Lkpg 175 (232)
T 3cbg_A 149 FDLIFIDAD---KRNYPRYYEIGLNLLRRG 175 (232)
T ss_dssp EEEEEECSC---GGGHHHHHHHHHHTEEEE
T ss_pred cCEEEECCC---HHHHHHHHHHHHHHcCCC
Confidence 999997533 456788999999999985
No 185
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.25 E-value=4.8e-11 Score=97.10 Aligned_cols=96 Identities=15% Similarity=0.023 Sum_probs=74.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC--CCCCCCcEEEE
Q 030935 70 SGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS--IFDLNPNIILG 145 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~--~~~~~fDlIi~ 145 (169)
..++|||+|||+|..+..+++. +.+++++|+ + .+++.+++++...++..++. +..++.... ..+..||+|++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~--~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~p~~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-P--QQLEMMRKQTAGLSGSERIH-GHGANLLDRDVPFPTGFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-H--HHHHHHHHHHTTCTTGGGEE-EEECCCCSSSCCCCCCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-H--HHHHHHHHHHHhcCcccceE-EEEccccccCCCCCCCcCEEEE
Confidence 4579999999999999999885 458999998 3 59999999998777643333 334444332 12368999999
Q ss_pred cCcCCCCCCh--HHHHHHHHHhccCC
Q 030935 146 ADVFYDASGK--ICAFEILICSLFPI 169 (169)
Q Consensus 146 sd~iy~~~~~--~~l~~~l~~~L~p~ 169 (169)
+.++|+..+. ..+++.++++|+|+
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pg 280 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKD 280 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTT
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999876544 57899999999996
No 186
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.24 E-value=1.8e-11 Score=107.66 Aligned_cols=110 Identities=17% Similarity=-0.001 Sum_probs=78.7
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcCCC
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWGFL 131 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~~~ 131 (169)
.......++... .+|++|||+|||||.+++.+++.|+ +|+++|++ +.+++.+++|++.|++. .++. +..++.
T Consensus 526 d~r~~r~~l~~~---~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s--~~al~~a~~N~~~ngl~~~~v~-~i~~D~ 599 (703)
T 3v97_A 526 DHRIARRMLGQM---SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMS--RTYLEWAERNLRLNGLTGRAHR-LIQADC 599 (703)
T ss_dssp GGHHHHHHHHHH---CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHTTCCSTTEE-EEESCH
T ss_pred cHHHHHHHHHHh---cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCccceE-EEecCH
Confidence 333344444432 3688999999999999999999888 69999999 57999999999999986 2222 333443
Q ss_pred CcC--CCCCCCcEEEEcCcCCCC-----------CChHHHHHHHHHhccCC
Q 030935 132 DAS--IFDLNPNIILGADVFYDA-----------SGKICAFEILICSLFPI 169 (169)
Q Consensus 132 ~~~--~~~~~fDlIi~sd~iy~~-----------~~~~~l~~~l~~~L~p~ 169 (169)
... ....+||+|++..+.|.. ..+..+++.+.+.|+|+
T Consensus 600 ~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lkpg 650 (703)
T 3v97_A 600 LAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAG 650 (703)
T ss_dssp HHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEE
T ss_pred HHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCC
Confidence 221 124589999986554421 24567888888999885
No 187
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.24 E-value=4.8e-11 Score=94.78 Aligned_cols=109 Identities=17% Similarity=0.003 Sum_probs=76.4
Q ss_pred eecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEc
Q 030935 50 FVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTW 128 (169)
Q Consensus 50 ~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~ 128 (169)
.+-.++..|.+.+.......++++|||+|||||.++..+++.|+ +|+++|+++. |++.+.++ .. ++..+..
T Consensus 65 yvsrg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~--mL~~a~r~----~~--rv~~~~~ 136 (291)
T 3hp7_A 65 YVSRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTN--QLVWKLRQ----DD--RVRSMEQ 136 (291)
T ss_dssp SSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSS--CSCHHHHT----CT--TEEEECS
T ss_pred cccchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHH--HHHHHHHh----Cc--ccceecc
Confidence 45567778888887765556788999999999999999999987 8999999965 88764332 11 1111221
Q ss_pred CCCCc----CCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 129 GFLDA----SIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 129 ~~~~~----~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.+... .+....||+|++ |+.+. ++..+++.+++.|+|+
T Consensus 137 ~ni~~l~~~~l~~~~fD~v~~-d~sf~--sl~~vL~e~~rvLkpG 178 (291)
T 3hp7_A 137 YNFRYAEPVDFTEGLPSFASI-DVSFI--SLNLILPALAKILVDG 178 (291)
T ss_dssp CCGGGCCGGGCTTCCCSEEEE-CCSSS--CGGGTHHHHHHHSCTT
T ss_pred cCceecchhhCCCCCCCEEEE-EeeHh--hHHHHHHHHHHHcCcC
Confidence 12111 112224999997 55544 5699999999999996
No 188
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.24 E-value=4.3e-11 Score=97.95 Aligned_cols=107 Identities=11% Similarity=-0.024 Sum_probs=74.7
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC--eEEEEcCCCcHHHHHHHHHHHHHhCCc--ceEEEEEcCC
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS--NVTLTDDSNRIEVLKNMRRVCEMNKLN--CRVMGLTWGF 130 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga--~V~~~D~~~~~~~l~~~~~n~~~n~~~--~~~~~l~~~~ 130 (169)
...++..+.... ..++.+|||+|||+|.+++.+++.+. +|+++|++ +.+++.+++|++.+++. +++...+..+
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis--~~~l~~A~~n~~~~gl~~~i~~~~~D~~~ 279 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKY--RKHLIGAEMNALAAGVLDKIKFIQGDATQ 279 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESC--HHHHHHHHHHHHHTTCGGGCEEEECCGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCC--HHHHHHHHHHHHHcCCCCceEEEECChhh
Confidence 445565555544 45678999999999999999999887 89999999 57999999999999883 4443333322
Q ss_pred CCcCCCCCCCcEEEEcCcCCCC----CCh----HHHHHHHHHhc
Q 030935 131 LDASIFDLNPNIILGADVFYDA----SGK----ICAFEILICSL 166 (169)
Q Consensus 131 ~~~~~~~~~fDlIi~sd~iy~~----~~~----~~l~~~l~~~L 166 (169)
. +....+||+|+++.+.... ... ..+++.+++.|
T Consensus 280 ~--~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 280 L--SQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp G--GGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE
T ss_pred C--CcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc
Confidence 2 2234689999995553321 223 45566666654
No 189
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.22 E-value=6.2e-11 Score=89.77 Aligned_cols=91 Identities=13% Similarity=0.003 Sum_probs=68.3
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCC-------eEEEEcCCCcHHHHHHHHHHHHHhCC------cceEEEEEcCCCCcC
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKVGS-------NVTLTDDSNRIEVLKNMRRVCEMNKL------NCRVMGLTWGFLDAS 134 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~ga-------~V~~~D~~~~~~~l~~~~~n~~~n~~------~~~~~~l~~~~~~~~ 134 (169)
..++.+|||+|||+|..+..+++... +|+++|++ +.+++.+++|++.++. .+.+. .++....
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~~~v~~~---~~d~~~~ 152 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERV--KDLVNFSLENIKRDKPELLKIDNFKII---HKNIYQV 152 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESC--HHHHHHHHHHHHHHCGGGGSSTTEEEE---ECCGGGC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCC--HHHHHHHHHHHHHcCccccccCCEEEE---ECChHhc
Confidence 44678999999999999999998753 99999999 5799999999988762 23333 3443332
Q ss_pred -----CCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 135 -----IFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 135 -----~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
....+||+|++...+.+ +++.+.+.|+|+
T Consensus 153 ~~~~~~~~~~fD~I~~~~~~~~------~~~~~~~~Lkpg 186 (227)
T 2pbf_A 153 NEEEKKELGLFDAIHVGASASE------LPEILVDLLAEN 186 (227)
T ss_dssp CHHHHHHHCCEEEEEECSBBSS------CCHHHHHHEEEE
T ss_pred ccccCccCCCcCEEEECCchHH------HHHHHHHhcCCC
Confidence 22358999999888764 347777888874
No 190
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.22 E-value=1.5e-11 Score=101.24 Aligned_cols=97 Identities=13% Similarity=0.025 Sum_probs=72.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCC-----CCCCCcEE
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASI-----FDLNPNII 143 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~-----~~~~fDlI 143 (169)
++++|||+|||+|.+++.+++.|+ +|+++|++ +.+++.+++|++.|++..++. +..++..... ...+||+|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s--~~~l~~a~~n~~~n~~~~~v~-~~~~d~~~~~~~~~~~~~~fD~V 293 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKS--PRAIETAKENAKLNGVEDRMK-FIVGSAFEEMEKLQKKGEKFDIV 293 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHTTCGGGEE-EEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCccce-EEECCHHHHHHHHHhhCCCCCEE
Confidence 678999999999999999999876 89999999 579999999999999853222 2333322211 14589999
Q ss_pred EEcCcCCCC---------CChHHHHHHHHHhccCC
Q 030935 144 LGADVFYDA---------SGKICAFEILICSLFPI 169 (169)
Q Consensus 144 i~sd~iy~~---------~~~~~l~~~l~~~L~p~ 169 (169)
++..+.|.. ..+..++..+.+.|+|+
T Consensus 294 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 328 (396)
T 2as0_A 294 VLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG 328 (396)
T ss_dssp EECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 985444432 34567888888888874
No 191
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.21 E-value=3e-11 Score=91.21 Aligned_cols=85 Identities=15% Similarity=-0.044 Sum_probs=67.7
Q ss_pred CCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcCC
Q 030935 71 GANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVFY 150 (169)
Q Consensus 71 ~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~iy 150 (169)
+.+|||+|||+|..+..+++. +++|++ +.+++.++++ + +.+...+... .+..+.+||+|++..+++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s--~~~~~~a~~~----~--~~~~~~d~~~--~~~~~~~fD~v~~~~~l~ 113 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPS--ERMAEIARKR----G--VFVLKGTAEN--LPLKDESFDFALMVTTIC 113 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESC--HHHHHHHHHT----T--CEEEECBTTB--CCSCTTCEEEEEEESCGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCC--HHHHHHHHhc----C--CEEEEccccc--CCCCCCCeeEEEEcchHh
Confidence 789999999999999888765 999999 5699988876 2 3333333222 123345899999999999
Q ss_pred CCCChHHHHHHHHHhccCC
Q 030935 151 DASGKICAFEILICSLFPI 169 (169)
Q Consensus 151 ~~~~~~~l~~~l~~~L~p~ 169 (169)
+..+...+++.+.+.|+|+
T Consensus 114 ~~~~~~~~l~~~~~~L~pg 132 (219)
T 1vlm_A 114 FVDDPERALKEAYRILKKG 132 (219)
T ss_dssp GSSCHHHHHHHHHHHEEEE
T ss_pred hccCHHHHHHHHHHHcCCC
Confidence 9999999999999999985
No 192
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.21 E-value=4.9e-11 Score=90.29 Aligned_cols=91 Identities=16% Similarity=0.128 Sum_probs=67.2
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHh-C--CeEEEEcCCCcHHHHHHHHHHHHHhCC------cceEEEEEcCCCCcC-CCC
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKV-G--SNVTLTDDSNRIEVLKNMRRVCEMNKL------NCRVMGLTWGFLDAS-IFD 137 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~-g--a~V~~~D~~~~~~~l~~~~~n~~~n~~------~~~~~~l~~~~~~~~-~~~ 137 (169)
..++.+|||+|||+|..+..+++. + .+|+++|++ +.+++.+++|+..++. .+.+. .++.... ...
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~v~~~---~~d~~~~~~~~ 149 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHI--KELVDDSVNNVRKDDPTLLSSGRVQLV---VGDGRMGYAEE 149 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESC--HHHHHHHHHHHHHHCTHHHHTSSEEEE---ESCGGGCCGGG
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCC--HHHHHHHHHHHHhhcccccCCCcEEEE---ECCcccCcccC
Confidence 346789999999999999999886 4 589999999 5699999999988654 23333 3333222 224
Q ss_pred CCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 138 LNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 138 ~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.+||+|++..++.+ +++.+.+.|+|+
T Consensus 150 ~~fD~i~~~~~~~~------~~~~~~~~Lkpg 175 (226)
T 1i1n_A 150 APYDAIHVGAAAPV------VPQALIDQLKPG 175 (226)
T ss_dssp CCEEEEEECSBBSS------CCHHHHHTEEEE
T ss_pred CCcCEEEECCchHH------HHHHHHHhcCCC
Confidence 58999998877643 346778888875
No 193
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.21 E-value=9.9e-11 Score=92.53 Aligned_cols=89 Identities=8% Similarity=0.042 Sum_probs=64.0
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCC
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFD 137 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~ 137 (169)
+++.+.......++.+|||+|||+|.++..+++.+.+|+++|++ +.+++.+++++..++...++. +..++......
T Consensus 16 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~-~~~~D~~~~~~- 91 (285)
T 1zq9_A 16 IINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD--PRLVAELHKRVQGTPVASKLQ-VLVGDVLKTDL- 91 (285)
T ss_dssp HHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESC--HHHHHHHHHHHTTSTTGGGEE-EEESCTTTSCC-
T ss_pred HHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECC--HHHHHHHHHHHHhcCCCCceE-EEEcceecccc-
Confidence 44445554445577899999999999999999999999999999 579999999987665532222 33444432212
Q ss_pred CCCcEEEEcCcCC
Q 030935 138 LNPNIILGADVFY 150 (169)
Q Consensus 138 ~~fDlIi~sd~iy 150 (169)
..||+|+++-+.+
T Consensus 92 ~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 92 PFFDTCVANLPYQ 104 (285)
T ss_dssp CCCSEEEEECCGG
T ss_pred hhhcEEEEecCcc
Confidence 2799999854443
No 194
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.20 E-value=1.2e-10 Score=91.51 Aligned_cols=96 Identities=20% Similarity=0.065 Sum_probs=70.7
Q ss_pred CCeEEEECCCC---CHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCC---------cCCC
Q 030935 71 GANVVELGAGT---SLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLD---------ASIF 136 (169)
Q Consensus 71 ~~~vLElGcGt---Gl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~---------~~~~ 136 (169)
..+|||||||+ |.+...+++. +++|+++|++ +.|++.+++++..+ ..+.+...+..+.. ..+.
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~s--p~~l~~Ar~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDID--PMVLTHGRALLAKD-PNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESS--HHHHHHHHHHHTTC-TTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECC--hHHHHHHHHhcCCC-CCeEEEEeeCCCchhhhccchhhccCC
Confidence 36999999999 9887766664 5699999999 67999999988532 22333333222110 0111
Q ss_pred CCCCcEEEEcCcCCCCCC--hHHHHHHHHHhccCC
Q 030935 137 DLNPNIILGADVFYDASG--KICAFEILICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~~~~--~~~l~~~l~~~L~p~ 169 (169)
..+||+|+++.++|+..+ ...+++.+.+.|+||
T Consensus 155 ~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pG 189 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPG 189 (274)
T ss_dssp TTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTT
T ss_pred CCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCC
Confidence 138999999999998766 899999999999996
No 195
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.19 E-value=4.5e-11 Score=95.07 Aligned_cols=95 Identities=12% Similarity=0.046 Sum_probs=64.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhC------CcceEEEEEcCCCCcCC--CCCC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNK------LNCRVMGLTWGFLDASI--FDLN 139 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~------~~~~~~~l~~~~~~~~~--~~~~ 139 (169)
+.++|||||||+|.++..+++.. .+|+++|+++ ++++.+++++...+ ..+++ ..++..... ...+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~--~vi~~ar~~~~~~~~~~~~~~rv~~---~~~D~~~~l~~~~~~ 157 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDA--GVVSFCRQYLPNHNAGSYDDPRFKL---VIDDGVNFVNQTSQT 157 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCT--THHHHHHHHCHHHHSSCTTCTTCCE---ECSCSCC---CCCCC
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHhhhhcccccccCCceEE---EEChHHHHHhhcCCC
Confidence 45799999999999999999863 4899999996 49999999986542 23333 334433222 2458
Q ss_pred CcEEEE--cCcCCCCCCh--HHHHHHHHHhccCC
Q 030935 140 PNIILG--ADVFYDASGK--ICAFEILICSLFPI 169 (169)
Q Consensus 140 fDlIi~--sd~iy~~~~~--~~l~~~l~~~L~p~ 169 (169)
||+|++ .+.......+ ..+++.+++.|+|+
T Consensus 158 fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~Lkpg 191 (294)
T 3adn_A 158 FDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPG 191 (294)
T ss_dssp EEEEEECC----------CCHHHHHHHHHTEEEE
T ss_pred ccEEEECCCCccCcchhccHHHHHHHHHHhcCCC
Confidence 999998 2222211222 78999999999985
No 196
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.19 E-value=1e-10 Score=90.02 Aligned_cols=98 Identities=5% Similarity=-0.153 Sum_probs=67.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC--eEEEEcCCCcHHHHHHHHHHHHHh--------CCc-ceEEEEEcCCCCc-CCCC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS--NVTLTDDSNRIEVLKNMRRVCEMN--------KLN-CRVMGLTWGFLDA-SIFD 137 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga--~V~~~D~~~~~~~l~~~~~n~~~n--------~~~-~~~~~l~~~~~~~-~~~~ 137 (169)
++.+|||+|||+|.+++.+++.+. +|+++|++ +.+++.+++|++.+ ++. +.+...+..+... ....
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIR--VQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESC--HHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcC--HHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 567899999999999999999864 79999999 56999999998876 543 3333333222111 1234
Q ss_pred CCCcEEEEcC--cCCCC------CChHHHHHHHHHhccCC
Q 030935 138 LNPNIILGAD--VFYDA------SGKICAFEILICSLFPI 169 (169)
Q Consensus 138 ~~fDlIi~sd--~iy~~------~~~~~l~~~l~~~L~p~ 169 (169)
..+|.|+... ..+.. ...+.+++.+.+.|+||
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~Lkpg 166 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEG 166 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCC
Confidence 5788888542 11100 01268999999999985
No 197
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.19 E-value=5e-11 Score=96.31 Aligned_cols=90 Identities=11% Similarity=0.043 Sum_probs=68.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVF 149 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~i 149 (169)
++.+|||+|||+|.+++. ++.+.+|+++|++ +.+++.+++|++.|++..++. +..++..... .+||+|++ |+.
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s--~~ai~~a~~n~~~n~l~~~v~-~~~~D~~~~~--~~fD~Vi~-dpP 267 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDIN--PHAIELLKKNIKLNKLEHKII-PILSDVREVD--VKGNRVIM-NLP 267 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESC--HHHHHHHHHHHHHTTCTTTEE-EEESCGGGCC--CCEEEEEE-CCT
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEE-EEECChHHhc--CCCcEEEE-CCc
Confidence 678999999999999999 8855599999999 679999999999999743322 3334433322 68999998 443
Q ss_pred CCCCChHHHHHHHHHhccCC
Q 030935 150 YDASGKICAFEILICSLFPI 169 (169)
Q Consensus 150 y~~~~~~~l~~~l~~~L~p~ 169 (169)
+. ...+++.+.+.|+|+
T Consensus 268 ~~---~~~~l~~~~~~L~~g 284 (336)
T 2yx1_A 268 KF---AHKFIDKALDIVEEG 284 (336)
T ss_dssp TT---GGGGHHHHHHHEEEE
T ss_pred Hh---HHHHHHHHHHHcCCC
Confidence 33 347788888888774
No 198
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.18 E-value=3.7e-11 Score=92.43 Aligned_cols=108 Identities=17% Similarity=-0.008 Sum_probs=73.1
Q ss_pred ecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcC
Q 030935 51 VWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWG 129 (169)
Q Consensus 51 ~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~ 129 (169)
+..++..|.+.+.......++++|||||||||.++..+++.|+ +|+++|+++. |++.++++.... ......
T Consensus 18 vsrg~~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~--ml~~a~~~~~~~------~~~~~~ 89 (232)
T 3opn_A 18 VSRGGLKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTN--QLAWKIRSDERV------VVMEQF 89 (232)
T ss_dssp SSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCC--CCCHHHHTCTTE------EEECSC
T ss_pred cCCcHHHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHH--HHHHHHHhCccc------cccccc
Confidence 4456677777777665556788999999999999999999986 9999999975 888776643211 111111
Q ss_pred CC---C-cCCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 130 FL---D-ASIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 130 ~~---~-~~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+. . .......||.+.+ |+++.. +..+++.+.+.|+|+
T Consensus 90 ~~~~~~~~~~~~~~~d~~~~-D~v~~~--l~~~l~~i~rvLkpg 130 (232)
T 3opn_A 90 NFRNAVLADFEQGRPSFTSI-DVSFIS--LDLILPPLYEILEKN 130 (232)
T ss_dssp CGGGCCGGGCCSCCCSEEEE-CCSSSC--GGGTHHHHHHHSCTT
T ss_pred eEEEeCHhHcCcCCCCEEEE-EEEhhh--HHHHHHHHHHhccCC
Confidence 11 0 1111113566553 555533 488999999999996
No 199
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.17 E-value=5.4e-11 Score=85.55 Aligned_cols=101 Identities=16% Similarity=0.065 Sum_probs=71.2
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-C--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCC
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-G--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGF 130 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~ 130 (169)
+...+.+++.......++.+|||+|||+|..+..+++. + .+|+++|+++ +++. ..+++. .++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~---~~~~---------~~~~~~---~~d 70 (180)
T 1ej0_A 6 AWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP---MDPI---------VGVDFL---QGD 70 (180)
T ss_dssp HHHHHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC---CCCC---------TTEEEE---ESC
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc---cccc---------CcEEEE---Ecc
Confidence 44455566555444456789999999999999999887 3 5999999994 3321 122332 233
Q ss_pred CCcC---------CCCCCCcEEEEcCcCCCCCCh-----------HHHHHHHHHhccCC
Q 030935 131 LDAS---------IFDLNPNIILGADVFYDASGK-----------ICAFEILICSLFPI 169 (169)
Q Consensus 131 ~~~~---------~~~~~fDlIi~sd~iy~~~~~-----------~~l~~~l~~~L~p~ 169 (169)
.... ..+.+||+|++..++++.... ..+++.+.+.|+|+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g 129 (180)
T 1ej0_A 71 FRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG 129 (180)
T ss_dssp TTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred cccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC
Confidence 3221 334689999998888877665 78899999999985
No 200
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.17 E-value=5.7e-11 Score=93.63 Aligned_cols=98 Identities=17% Similarity=0.009 Sum_probs=67.4
Q ss_pred CCCeEEEECCCCCH----HHHHHHHh-C-----CeEEEEcCCCcHHHHHHHHHHHHH----h------------------
Q 030935 70 SGANVVELGAGTSL----PGLVAAKV-G-----SNVTLTDDSNRIEVLKNMRRVCEM----N------------------ 117 (169)
Q Consensus 70 ~~~~vLElGcGtGl----~~l~~a~~-g-----a~V~~~D~~~~~~~l~~~~~n~~~----n------------------ 117 (169)
++.+|||+|||||- +++.+++. + .+|++||+| ++|++.|++++.. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis--~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~ 182 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDID--TEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPH 182 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESC--HHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECC--HHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCC
Confidence 34689999999998 66666664 3 489999999 5699999987521 0
Q ss_pred CCcce-------EEEEEcCCCCcC-CC-CCCCcEEEEcCcCCCCCC--hHHHHHHHHHhccCC
Q 030935 118 KLNCR-------VMGLTWGFLDAS-IF-DLNPNIILGADVFYDASG--KICAFEILICSLFPI 169 (169)
Q Consensus 118 ~~~~~-------~~~l~~~~~~~~-~~-~~~fDlIi~sd~iy~~~~--~~~l~~~l~~~L~p~ 169 (169)
+.... ...+...+.... .. ..+||+|+|..++.+... ...+++.+++.|+||
T Consensus 183 ~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pg 245 (274)
T 1af7_A 183 EGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPD 245 (274)
T ss_dssp CSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEE
T ss_pred CCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCC
Confidence 00000 012333444332 22 358999999998755543 488999999999986
No 201
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.17 E-value=1.2e-10 Score=88.44 Aligned_cols=91 Identities=13% Similarity=0.053 Sum_probs=67.3
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHh-C-------CeEEEEcCCCcHHHHHHHHHHHHHhC-----C-cceEEEEEcCCCCc
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKV-G-------SNVTLTDDSNRIEVLKNMRRVCEMNK-----L-NCRVMGLTWGFLDA 133 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~-g-------a~V~~~D~~~~~~~l~~~~~n~~~n~-----~-~~~~~~l~~~~~~~ 133 (169)
..++.+|||+|||+|..+..+++. + .+|+++|++ +.+++.+++|+..++ . .+.+ ..++...
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~~~v~~---~~~d~~~ 156 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQ--AELVRRSKANLNTDDRSMLDSGQLLI---VEGDGRK 156 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESC--HHHHHHHHHHHHHHHHHHHHHTSEEE---EESCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcC--HHHHHHHHHHHHhcCccccCCCceEE---EECCccc
Confidence 346789999999999999988873 4 489999999 579999999987654 1 2332 3344333
Q ss_pred CCCC-CCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 134 SIFD-LNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 134 ~~~~-~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.... .+||+|++...+++. .+.+.+.|+|+
T Consensus 157 ~~~~~~~fD~I~~~~~~~~~------~~~~~~~Lkpg 187 (227)
T 1r18_A 157 GYPPNAPYNAIHVGAAAPDT------PTELINQLASG 187 (227)
T ss_dssp CCGGGCSEEEEEECSCBSSC------CHHHHHTEEEE
T ss_pred CCCcCCCccEEEECCchHHH------HHHHHHHhcCC
Confidence 3333 589999998887653 36778888874
No 202
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.17 E-value=1.1e-10 Score=96.03 Aligned_cols=111 Identities=14% Similarity=0.015 Sum_probs=80.4
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhC----------------------------------------Ce
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVG----------------------------------------SN 94 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g----------------------------------------a~ 94 (169)
...|+..|.......++..|||.|||+|.+.+.++..+ .+
T Consensus 180 ~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 180 RETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp CHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred cHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 45678777776666678899999999999999988764 36
Q ss_pred EEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcCCC----CCChHHHHHHHHHhccC
Q 030935 95 VTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVFYD----ASGKICAFEILICSLFP 168 (169)
Q Consensus 95 V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~iy~----~~~~~~l~~~l~~~L~p 168 (169)
|+++|++ +.+++.++.|++.+++...+. +..++......+.+||+|+++.+... ...+..+++.+.+.|++
T Consensus 260 V~GvDid--~~ai~~Ar~Na~~~gl~~~i~-~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~ 334 (385)
T 3ldu_A 260 IYGYDID--EESIDIARENAEIAGVDEYIE-FNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRK 334 (385)
T ss_dssp EEEEESC--HHHHHHHHHHHHHHTCGGGEE-EEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECC--HHHHHHHHHHHHHcCCCCceE-EEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhh
Confidence 9999999 679999999999999863322 34444433333458999998666432 13455667766666654
No 203
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.16 E-value=1.6e-10 Score=92.59 Aligned_cols=108 Identities=14% Similarity=-0.020 Sum_probs=73.8
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCC
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGF 130 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~ 130 (169)
++..++..+ ...++.+|||+|||+|..++.+++. +.+|+++|++ +.+++.+++|++.+++.. +. +..++
T Consensus 106 ~s~l~~~~l----~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s--~~~l~~a~~~~~~~g~~~-v~-~~~~D 177 (315)
T 1ixk_A 106 SSMYPPVAL----DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVD--ENRLRETRLNLSRLGVLN-VI-LFHSS 177 (315)
T ss_dssp HHHHHHHHH----CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSC--HHHHHHHHHHHHHHTCCS-EE-EESSC
T ss_pred HHHHHHHHh----CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCC--HHHHHHHHHHHHHhCCCe-EE-EEECC
Confidence 444444444 2346789999999999999999875 2589999999 569999999999988742 22 33333
Q ss_pred CCcC-CCCCCCcEEEEcCcC------CCCCC----------------hHHHHHHHHHhccCC
Q 030935 131 LDAS-IFDLNPNIILGADVF------YDASG----------------KICAFEILICSLFPI 169 (169)
Q Consensus 131 ~~~~-~~~~~fDlIi~sd~i------y~~~~----------------~~~l~~~l~~~L~p~ 169 (169)
.... ..+.+||+|++.-+. ....+ ...+++.+.+.|+||
T Consensus 178 ~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG 239 (315)
T 1ixk_A 178 SLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG 239 (315)
T ss_dssp GGGGGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred hhhcccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3221 134589999984332 11111 157889999999985
No 204
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.16 E-value=1.7e-10 Score=89.24 Aligned_cols=93 Identities=11% Similarity=-0.051 Sum_probs=71.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVF 149 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~i 149 (169)
...+|||||||+|.+++... .+.+++++|++ +.+++.++.++..++.+.++ .+.+......+.+||+|++..++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId--~~~i~~ar~~~~~~g~~~~~---~v~D~~~~~~~~~~DvvLllk~l 178 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER-GIASVWGCDIH--QGLGDVITPFAREKDWDFTF---ALQDVLCAPPAEAGDLALIFKLL 178 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT-TCSEEEEEESB--HHHHHHHHHHHHHTTCEEEE---EECCTTTSCCCCBCSEEEEESCH
T ss_pred CCCeEEEecCCccHHHHHhc-cCCeEEEEeCC--HHHHHHHHHHHHhcCCCceE---EEeecccCCCCCCcchHHHHHHH
Confidence 46699999999999999888 55599999999 67999999999998876543 34555445566699999999999
Q ss_pred CCCCCh--HHHHHHHHHhccCC
Q 030935 150 YDASGK--ICAFEILICSLFPI 169 (169)
Q Consensus 150 y~~~~~--~~l~~~l~~~L~p~ 169 (169)
++.+.. ...+ .+.+.|+|.
T Consensus 179 h~LE~q~~~~~~-~ll~aL~~~ 199 (253)
T 3frh_A 179 PLLEREQAGSAM-ALLQSLNTP 199 (253)
T ss_dssp HHHHHHSTTHHH-HHHHHCBCS
T ss_pred HHhhhhchhhHH-HHHHHhcCC
Confidence 866333 2344 666677663
No 205
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.15 E-value=4.5e-11 Score=96.71 Aligned_cols=98 Identities=9% Similarity=-0.042 Sum_probs=67.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHh--CC---cceEEEEEcCCCCcCCCCCCCcE
Q 030935 70 SGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMN--KL---NCRVMGLTWGFLDASIFDLNPNI 142 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n--~~---~~~~~~l~~~~~~~~~~~~~fDl 142 (169)
++++|||||||+|.+++.+++. +.+|+++|++ +.+++.+++|+... ++ .+++...++........+.+||+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis--~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEID--KMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESC--HHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECC--HHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 4679999999999999999986 3599999999 57999999998652 22 23333222221111222458999
Q ss_pred EEEcCc--CCCCCC--hHHHHHHHHHhccCC
Q 030935 143 ILGADV--FYDASG--KICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~--iy~~~~--~~~l~~~l~~~L~p~ 169 (169)
|++.-. ...... ...+++.+.+.|+|+
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg 228 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPG 228 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEE
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCC
Confidence 997322 221121 478999999999985
No 206
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.14 E-value=7e-11 Score=90.90 Aligned_cols=88 Identities=11% Similarity=-0.038 Sum_probs=62.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHh------CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC----CCC-C
Q 030935 70 SGANVVELGAGTSLPGLVAAKV------GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS----IFD-L 138 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~------ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~----~~~-~ 138 (169)
++.+|||||||+|..++.+++. +++|+++|+++. +++.++. ...++++. .++.... ... .
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~--~l~~a~~----~~~~v~~~---~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLS--RCQIPAS----DMENITLH---QGDCSDLTTFEHLREM 151 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCT--TCCCCGG----GCTTEEEE---ECCSSCSGGGGGGSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChH--HHHHHhc----cCCceEEE---ECcchhHHHHHhhccC
Confidence 4679999999999999999987 569999999964 8877661 12233333 3333221 122 3
Q ss_pred CCcEEEEcCcCCCCCChHHHHHHHHH-hccCC
Q 030935 139 NPNIILGADVFYDASGKICAFEILIC-SLFPI 169 (169)
Q Consensus 139 ~fDlIi~sd~iy~~~~~~~l~~~l~~-~L~p~ 169 (169)
+||+|++... + ..++.+++.+.+ .|+||
T Consensus 152 ~fD~I~~d~~-~--~~~~~~l~~~~r~~LkpG 180 (236)
T 2bm8_A 152 AHPLIFIDNA-H--ANTFNIMKWAVDHLLEEG 180 (236)
T ss_dssp CSSEEEEESS-C--SSHHHHHHHHHHHTCCTT
T ss_pred CCCEEEECCc-h--HhHHHHHHHHHHhhCCCC
Confidence 7999997544 3 478889999996 99996
No 207
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.13 E-value=2.7e-10 Score=93.79 Aligned_cols=112 Identities=13% Similarity=0.046 Sum_probs=80.5
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC----------------------------------------
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS---------------------------------------- 93 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga---------------------------------------- 93 (169)
-...||.-|.......++..+||.+||+|.+.+.++..+.
T Consensus 178 l~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 257 (384)
T 3ldg_A 178 IKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQL 257 (384)
T ss_dssp CCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCc
Confidence 3466777777665555778999999999999999887643
Q ss_pred eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcCCCC----CChHHHHHHHHHhccC
Q 030935 94 NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVFYDA----SGKICAFEILICSLFP 168 (169)
Q Consensus 94 ~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~iy~~----~~~~~l~~~l~~~L~p 168 (169)
+|+++|++ +.+++.+++|++.+++...+. +..++......+.+||+|+++.+.... ..+..+++.+.+.|++
T Consensus 258 ~v~GvDid--~~al~~Ar~Na~~~gl~~~I~-~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 258 DISGFDFD--GRMVEIARKNAREVGLEDVVK-LKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAP 333 (384)
T ss_dssp CEEEEESC--HHHHHHHHHHHHHTTCTTTEE-EEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT
T ss_pred eEEEEECC--HHHHHHHHHHHHHcCCCCceE-EEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh
Confidence 49999999 679999999999999864332 344444333334589999985554321 3456677777777664
No 208
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.12 E-value=5.8e-10 Score=85.89 Aligned_cols=113 Identities=13% Similarity=-0.022 Sum_probs=69.5
Q ss_pred eeecch-HHHHHHHHHhccC---CCCCCeEEEECCCCCHHHHHHHHh-C--CeEEEEcCCCcHHHHHHHHHHHHHhCCcc
Q 030935 49 LFVWPC-SVILAEYVWQQRY---RFSGANVVELGAGTSLPGLVAAKV-G--SNVTLTDDSNRIEVLKNMRRVCEMNKLNC 121 (169)
Q Consensus 49 ~~~W~~-~~~La~~l~~~~~---~~~~~~vLElGcGtGl~~l~~a~~-g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~ 121 (169)
.+.|.. -..++..+..... ..+|.+|||+|||+|..+..+++. + .+|+++|++ +.+++.+.+.++.. .++
T Consensus 51 yr~w~~~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s--~~~l~~l~~~a~~r-~nv 127 (232)
T 3id6_C 51 YREWNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFS--PRVVRELLLVAQRR-PNI 127 (232)
T ss_dssp EEECCTTTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECC--HHHHHHHHHHHHHC-TTE
T ss_pred hhhhchHHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECc--HHHHHHHHHHhhhc-CCe
Confidence 445543 2245556655433 557889999999999999988875 3 399999999 55776554444332 223
Q ss_pred eEEEEEcCCCCcC----CCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 122 RVMGLTWGFLDAS----IFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 122 ~~~~l~~~~~~~~----~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
.+. .++...+ ....+||+|++.-.. +...+.+.+.+.+.|+|+
T Consensus 128 ~~i---~~Da~~~~~~~~~~~~~D~I~~d~a~--~~~~~il~~~~~~~LkpG 174 (232)
T 3id6_C 128 FPL---LADARFPQSYKSVVENVDVLYVDIAQ--PDQTDIAIYNAKFFLKVN 174 (232)
T ss_dssp EEE---ECCTTCGGGTTTTCCCEEEEEECCCC--TTHHHHHHHHHHHHEEEE
T ss_pred EEE---EcccccchhhhccccceEEEEecCCC--hhHHHHHHHHHHHhCCCC
Confidence 332 2332221 123589999975332 333344556666699985
No 209
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.12 E-value=2.8e-10 Score=93.91 Aligned_cols=111 Identities=7% Similarity=-0.034 Sum_probs=78.1
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC----------------------------------------e
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS----------------------------------------N 94 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga----------------------------------------~ 94 (169)
...||.-|.......++..|||.+||+|.+.+.+|..+. +
T Consensus 186 ~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 265 (393)
T 3k0b_A 186 KETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN 265 (393)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce
Confidence 456777666655555678999999999999999887643 4
Q ss_pred EEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCcCCCC----CChHHHHHHHHHhccC
Q 030935 95 VTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADVFYDA----SGKICAFEILICSLFP 168 (169)
Q Consensus 95 V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~iy~~----~~~~~l~~~l~~~L~p 168 (169)
|+++|++ +.+++.++.|++.+++...+. +..++......+.+||+|+++.+.... ..+..+++.+.+.|++
T Consensus 266 V~GvDid--~~al~~Ar~Na~~~gl~~~I~-~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~ 340 (393)
T 3k0b_A 266 IIGGDID--ARLIEIAKQNAVEAGLGDLIT-FRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKR 340 (393)
T ss_dssp EEEEESC--HHHHHHHHHHHHHTTCTTCSE-EEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECC--HHHHHHHHHHHHHcCCCCceE-EEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhc
Confidence 9999999 679999999999998863222 333443333334589999986554321 3355567666666654
No 210
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.11 E-value=1.3e-10 Score=91.12 Aligned_cols=107 Identities=10% Similarity=-0.065 Sum_probs=75.1
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh--C-CeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcC
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV--G-SNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWG 129 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~--g-a~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~ 129 (169)
++..++..+ ...++.+|||+|||+|..++.+++. + .+|+++|++ +.+++.+++|++.+++. +.+. .+
T Consensus 71 ~s~l~~~~l----~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~--~~~l~~~~~~~~~~g~~~v~~~---~~ 141 (274)
T 3ajd_A 71 SSMIPPIVL----NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEIS--KTRTKALKSNINRMGVLNTIII---NA 141 (274)
T ss_dssp GGGHHHHHH----CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESC--HHHHHHHHHHHHHTTCCSEEEE---ES
T ss_pred HHHHHHHHh----CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCC--HHHHHHHHHHHHHhCCCcEEEE---eC
Confidence 344444444 2346789999999999999988873 4 589999999 56999999999998874 3332 23
Q ss_pred CCCcCC-----CCCCCcEEEEcCcCCCC------------------CChHHHHHHHHHhccCC
Q 030935 130 FLDASI-----FDLNPNIILGADVFYDA------------------SGKICAFEILICSLFPI 169 (169)
Q Consensus 130 ~~~~~~-----~~~~fDlIi~sd~iy~~------------------~~~~~l~~~l~~~L~p~ 169 (169)
+..... ...+||+|++.-+.... .....+++.+.+.|+||
T Consensus 142 D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 204 (274)
T 3ajd_A 142 DMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKD 204 (274)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEE
T ss_pred ChHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 322211 14589999975333211 45578999999999985
No 211
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.11 E-value=1.1e-11 Score=96.83 Aligned_cols=79 Identities=20% Similarity=0.259 Sum_probs=58.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcH-------HHHHHHHHHHHHhCCcceEEEEEcCCCCcC---CCC--
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRI-------EVLKNMRRVCEMNKLNCRVMGLTWGFLDAS---IFD-- 137 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~-------~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~---~~~-- 137 (169)
++.+|||+|||+|..++.+++.|.+|+++|++ + ++++.+++|++.|++..++. +..++.... ..+
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s--~~~~~ll~~~l~~a~~n~~~~~~~~ri~-~~~~d~~~~l~~~~~~~ 159 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQH--PAVACLLSDGIRRALLNPETQDTAARIN-LHFGNAAEQMPALVKTQ 159 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECC--HHHHHHHHHHHHHHHHSHHHHHHHTTEE-EEESCHHHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECC--hhhhHHHHHHHHHHHhHHHhhCCccCeE-EEECCHHHHHHhhhccC
Confidence 56799999999999999999999999999999 6 69999999998887643222 333443221 122
Q ss_pred CCCcEEEEcCcCCCC
Q 030935 138 LNPNIILGADVFYDA 152 (169)
Q Consensus 138 ~~fDlIi~sd~iy~~ 152 (169)
.+||+|++ |+.|..
T Consensus 160 ~~fD~V~~-dP~~~~ 173 (258)
T 2r6z_A 160 GKPDIVYL-DPMYPE 173 (258)
T ss_dssp CCCSEEEE-CCCC--
T ss_pred CCccEEEE-CCCCCC
Confidence 58999997 455543
No 212
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.11 E-value=1.1e-10 Score=91.83 Aligned_cols=96 Identities=16% Similarity=0.001 Sum_probs=68.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-C-CeEEEEcCCCcHHHHHHHHHHHHHh--CCc-ceEEEEEcCCCCcC--CCCCCCcE
Q 030935 70 SGANVVELGAGTSLPGLVAAKV-G-SNVTLTDDSNRIEVLKNMRRVCEMN--KLN-CRVMGLTWGFLDAS--IFDLNPNI 142 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~-g-a~V~~~D~~~~~~~l~~~~~n~~~n--~~~-~~~~~l~~~~~~~~--~~~~~fDl 142 (169)
.+++|||||||+|.++..+++. + .+|+++|++ +.+++.+++|+... +.. .++. +..++.... ..+.+||+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid--~~~v~~ar~~~~~~~~~~~~~rv~-v~~~D~~~~l~~~~~~fD~ 151 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDID--GKVIEYSKKFLPSIAGKLDDPRVD-VQVDDGFMHIAKSENQYDV 151 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESC--HHHHHHHHHHCHHHHTTTTSTTEE-EEESCSHHHHHTCCSCEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECC--HHHHHHHHHHhHhhccccCCCceE-EEECcHHHHHhhCCCCeeE
Confidence 4679999999999999999987 4 489999999 67999999987542 231 2222 334443221 12458999
Q ss_pred EEEcCcCCCCCC-----hHHHHHHHHHhccCC
Q 030935 143 ILGADVFYDASG-----KICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~iy~~~~-----~~~l~~~l~~~L~p~ 169 (169)
|++ |+.+.... ...+++.+++.|+|+
T Consensus 152 Ii~-d~~~~~~~~~~l~~~~~~~~~~~~L~pg 182 (275)
T 1iy9_A 152 IMV-DSTEPVGPAVNLFTKGFYAGIAKALKED 182 (275)
T ss_dssp EEE-SCSSCCSCCCCCSTTHHHHHHHHHEEEE
T ss_pred EEE-CCCCCCCcchhhhHHHHHHHHHHhcCCC
Confidence 998 66553221 368999999999985
No 213
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.10 E-value=4.4e-11 Score=93.49 Aligned_cols=93 Identities=9% Similarity=-0.045 Sum_probs=75.3
Q ss_pred CCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCc
Q 030935 71 GANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADV 148 (169)
Q Consensus 71 ~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~ 148 (169)
..+|||||||+|.+++.++.. .++++++|++ +.+++.++.|+..+++..+ +.+.+......+.+||+|++..+
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId--~~~le~a~~~l~~~g~~~~---~~v~D~~~~~p~~~~DvaL~lkt 207 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDID--ARLVGFVDEALTRLNVPHR---TNVADLLEDRLDEPADVTLLLKT 207 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESB--HHHHHHHHHHHHHTTCCEE---EEECCTTTSCCCSCCSEEEETTC
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCC--HHHHHHHHHHHHhcCCCce---EEEeeecccCCCCCcchHHHHHH
Confidence 559999999999999988875 3499999999 5799999999999998754 45566656667779999999999
Q ss_pred CCCCCCh--HHHHHHHHHhccCC
Q 030935 149 FYDASGK--ICAFEILICSLFPI 169 (169)
Q Consensus 149 iy~~~~~--~~l~~~l~~~L~p~ 169 (169)
+++.+.. ..++ .+.+.|+|+
T Consensus 208 i~~Le~q~kg~g~-~ll~aL~~~ 229 (281)
T 3lcv_B 208 LPCLETQQRGSGW-EVIDIVNSP 229 (281)
T ss_dssp HHHHHHHSTTHHH-HHHHHSSCS
T ss_pred HHHhhhhhhHHHH-HHHHHhCCC
Confidence 9876444 3455 788888774
No 214
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.10 E-value=1.1e-10 Score=95.92 Aligned_cols=92 Identities=16% Similarity=0.056 Sum_probs=68.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CC-eEEEEcCCCcHHHHHHHHHHHHHh---------------CCcceEEEEEcCCCC
Q 030935 70 SGANVVELGAGTSLPGLVAAKV-GS-NVTLTDDSNRIEVLKNMRRVCEMN---------------KLNCRVMGLTWGFLD 132 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~-ga-~V~~~D~~~~~~~l~~~~~n~~~n---------------~~~~~~~~l~~~~~~ 132 (169)
++.+|||+|||+|..|+.+++. ++ +|+++|++ +++++.+++|++.| ++.. ..+..++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~--~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~--i~v~~~Da~ 122 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDIS--EDAYELMKRNVMLNFDGELRESKGRAILKGEKT--IVINHDDAN 122 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESC--HHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE--EEEEESCHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECC--HHHHHHHHHHHHHhcccccccccccccccCCCc--eEEEcCcHH
Confidence 5789999999999999999987 54 89999999 57999999999999 6652 223344432
Q ss_pred cCC--CCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 133 ASI--FDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 133 ~~~--~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
... ...+||+|+ .|+.+. ...++....+.|+|+
T Consensus 123 ~~~~~~~~~fD~I~-lDP~~~---~~~~l~~a~~~lk~g 157 (378)
T 2dul_A 123 RLMAERHRYFHFID-LDPFGS---PMEFLDTALRSAKRR 157 (378)
T ss_dssp HHHHHSTTCEEEEE-ECCSSC---CHHHHHHHHHHEEEE
T ss_pred HHHHhccCCCCEEE-eCCCCC---HHHHHHHHHHhcCCC
Confidence 211 134799999 477443 467777777777763
No 215
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.10 E-value=4.9e-10 Score=91.53 Aligned_cols=63 Identities=16% Similarity=0.141 Sum_probs=53.2
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCc
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLN 120 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~ 120 (169)
+..+..++...... .+.+|||+|||+|.+++.+|+.+.+|+++|++ +.+++.+++|++.|++.
T Consensus 199 ~~~l~~~~~~~~~~-~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~--~~ai~~a~~n~~~ng~~ 261 (369)
T 3bt7_A 199 NIQMLEWALDVTKG-SKGDLLELYCGNGNFSLALARNFDRVLATEIA--KPSVAAAQYNIAANHID 261 (369)
T ss_dssp HHHHHHHHHHHTTT-CCSEEEEESCTTSHHHHHHGGGSSEEEEECCC--HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhhc-CCCEEEEccCCCCHHHHHHHhcCCEEEEEECC--HHHHHHHHHHHHHcCCC
Confidence 46677777665433 36789999999999999999977799999999 67999999999999874
No 216
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.10 E-value=9.8e-11 Score=93.36 Aligned_cols=95 Identities=14% Similarity=0.015 Sum_probs=65.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHH---h--CCcceEEEEEcCCCCcCC---CCCC
Q 030935 70 SGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEM---N--KLNCRVMGLTWGFLDASI---FDLN 139 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~---n--~~~~~~~~l~~~~~~~~~---~~~~ 139 (169)
++++|||||||+|.++..+++. ..+|+++|++ +.+++.+++++.. . ...+++. .++..... .+.+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid--~~~i~~a~~~~~~~~~~~~~~~v~~~---~~D~~~~~~~~~~~~ 169 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDID--GEVMEQSKQHFPQISRSLADPRATVR---VGDGLAFVRQTPDNT 169 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESC--HHHHHHHHHHCHHHHGGGGCTTEEEE---ESCHHHHHHSSCTTC
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHhHHhhcccCCCcEEEE---ECcHHHHHHhccCCc
Confidence 5679999999999999999986 3489999999 5799999998742 1 1223333 33332211 3468
Q ss_pred CcEEEEcCcCCCCCC--h--HHHHHHHHHhccCC
Q 030935 140 PNIILGADVFYDASG--K--ICAFEILICSLFPI 169 (169)
Q Consensus 140 fDlIi~sd~iy~~~~--~--~~l~~~l~~~L~p~ 169 (169)
||+|++.-..+.... + ..+++.+++.|+|+
T Consensus 170 fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg 203 (304)
T 3bwc_A 170 YDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD 203 (304)
T ss_dssp EEEEEEECC---------CCHHHHHHHHHHEEEE
T ss_pred eeEEEECCCCccccchhhhHHHHHHHHHHhcCCC
Confidence 999998443332111 1 68899999999985
No 217
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.10 E-value=2.2e-10 Score=88.18 Aligned_cols=95 Identities=5% Similarity=-0.129 Sum_probs=65.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHH------hCC-cceEEEEEcCCCCcC----CC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEM------NKL-NCRVMGLTWGFLDAS----IF 136 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~------n~~-~~~~~~l~~~~~~~~----~~ 136 (169)
++.+|||||||+|..++.+|+.. .+|+++|++ +.|++.++++++. ++. ++++. .++.... +.
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis--~~~l~~A~~~~~~l~~~~~~~~~nv~~~---~~d~~~~l~~~~~ 120 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIR--VKVSDYVQDRIRALRAAPAGGFQNIACL---RSNAMKHLPNFFY 120 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESC--HHHHHHHHHHHHHHHHSTTCCCTTEEEE---ECCTTTCHHHHCC
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECC--HHHHHHHHHHHHHHHHHHhcCCCeEEEE---ECcHHHhhhhhCC
Confidence 45689999999999999999873 589999999 5699999988764 233 23333 3333221 23
Q ss_pred CCCCcEEEEcCcCCCCC--------ChHHHHHHHHHhccCC
Q 030935 137 DLNPNIILGADVFYDAS--------GKICAFEILICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~~~--------~~~~l~~~l~~~L~p~ 169 (169)
+..||.|+..-.-.+.. ..+.+++.+.+.|+||
T Consensus 121 ~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpG 161 (235)
T 3ckk_A 121 KGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVG 161 (235)
T ss_dssp TTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEE
T ss_pred CcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCC
Confidence 56899998642211111 1257999999999985
No 218
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.09 E-value=3.9e-10 Score=91.11 Aligned_cols=95 Identities=7% Similarity=-0.099 Sum_probs=71.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC-------CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcE
Q 030935 70 SGANVVELGAGTSLPGLVAAKVG-------SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNI 142 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~g-------a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDl 142 (169)
++.+|||+|||+|.+++.+++.. .+++++|++ +.+++.++.|+..+++... +..++........+||+
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~--~~~~~~a~~n~~~~g~~~~---i~~~D~l~~~~~~~fD~ 204 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVD--DLLISLALVGADLQRQKMT---LLHQDGLANLLVDPVDV 204 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESC--HHHHHHHHHHHHHHTCCCE---EEESCTTSCCCCCCEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECC--HHHHHHHHHHHHhCCCCce---EEECCCCCccccCCccE
Confidence 56799999999999999888753 589999999 5799999999998887544 34455444444568999
Q ss_pred EEEcCcCCCCCC-----------------h-HHHHHHHHHhccCC
Q 030935 143 ILGADVFYDASG-----------------K-ICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~iy~~~~-----------------~-~~l~~~l~~~L~p~ 169 (169)
|+++.++.+... . ..+++.+.+.|+|+
T Consensus 205 Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~g 249 (344)
T 2f8l_A 205 VISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPG 249 (344)
T ss_dssp EEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEE
T ss_pred EEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCC
Confidence 999888522211 1 25788888888874
No 219
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.09 E-value=4.6e-10 Score=89.32 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=62.6
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-CCC
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-SIF 136 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~~~ 136 (169)
+++.+.+.....++.+|||+|||+|.++..+++.+.+|+++|+++ ++++.+++++.. ..+++ +..++... ...
T Consensus 38 i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~--~li~~a~~~~~~-~~~v~---vi~gD~l~~~~~ 111 (295)
T 3gru_A 38 FVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDK--SLEPYANKLKEL-YNNIE---IIWGDALKVDLN 111 (295)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCG--GGHHHHHHHHHH-CSSEE---EEESCTTTSCGG
T ss_pred HHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCH--HHHHHHHHHhcc-CCCeE---EEECchhhCCcc
Confidence 344455444555788999999999999999999988999999995 599999999872 22333 33444433 233
Q ss_pred CCCCcEEEEcCcCC
Q 030935 137 DLNPNIILGADVFY 150 (169)
Q Consensus 137 ~~~fDlIi~sd~iy 150 (169)
..+||.|+++-+.|
T Consensus 112 ~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 112 KLDFNKVVANLPYQ 125 (295)
T ss_dssp GSCCSEEEEECCGG
T ss_pred cCCccEEEEeCccc
Confidence 34799999874433
No 220
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.09 E-value=2.4e-10 Score=88.60 Aligned_cols=99 Identities=14% Similarity=0.035 Sum_probs=68.3
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCC
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLD 132 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~ 132 (169)
...+.+++..... .++.+|||+|||+|..+..+++. +.+|+++|++ +.+++.++++. ..+.+...++.+.
T Consensus 71 ~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s--~~~~~~a~~~~----~~~~~~~~d~~~~- 142 (269)
T 1p91_A 71 RDAIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVS--KVAIKAAAKRY----PQVTFCVASSHRL- 142 (269)
T ss_dssp HHHHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESC--HHHHHHHHHHC----TTSEEEECCTTSC-
T ss_pred HHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCC--HHHHHHHHHhC----CCcEEEEcchhhC-
Confidence 3445555544321 35779999999999999999886 6799999999 56999888764 2233333333221
Q ss_pred cCCCCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 133 ASIFDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 133 ~~~~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+..+.+||+|++..+ ..+++.+.+.|+|+
T Consensus 143 -~~~~~~fD~v~~~~~-------~~~l~~~~~~L~pg 171 (269)
T 1p91_A 143 -PFSDTSMDAIIRIYA-------PCKAEELARVVKPG 171 (269)
T ss_dssp -SBCTTCEEEEEEESC-------CCCHHHHHHHEEEE
T ss_pred -CCCCCceeEEEEeCC-------hhhHHHHHHhcCCC
Confidence 233458999998765 23578888888885
No 221
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.08 E-value=3.8e-10 Score=89.78 Aligned_cols=87 Identities=15% Similarity=0.123 Sum_probs=61.5
Q ss_pred HHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcCCCCcCCCC
Q 030935 59 AEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWGFLDASIFD 137 (169)
Q Consensus 59 a~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~~~~~~~~~ 137 (169)
++.+.......++.+|||+|||+|.++..+++.+.+|+++|++ +.+++.+++|+..++.. +++. .++.... ..
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~--~~~~~~a~~~~~~~~~~~v~~~---~~D~~~~-~~ 104 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDID--SRMISEVKKRCLYEGYNNLEVY---EGDAIKT-VF 104 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSC--HHHHHHHHHHHHHTTCCCEEC-------CCSS-CC
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECC--HHHHHHHHHHHHHcCCCceEEE---ECchhhC-Cc
Confidence 3444444444577899999999999999999998899999999 57999999999877652 3333 3333221 22
Q ss_pred CCCcEEEEcCcCCCC
Q 030935 138 LNPNIILGADVFYDA 152 (169)
Q Consensus 138 ~~fDlIi~sd~iy~~ 152 (169)
.+||+|+++ +.|+.
T Consensus 105 ~~~D~Vv~n-~py~~ 118 (299)
T 2h1r_A 105 PKFDVCTAN-IPYKI 118 (299)
T ss_dssp CCCSEEEEE-CCGGG
T ss_pred ccCCEEEEc-CCccc
Confidence 389999985 45543
No 222
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.08 E-value=1.2e-10 Score=94.19 Aligned_cols=94 Identities=12% Similarity=0.062 Sum_probs=67.3
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCC--eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEE
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKVGS--NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILG 145 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~ga--~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~ 145 (169)
..++.+|||+|||+|..+..+++... +++++|++ .++. +.+++..+...++. +..++...+. + +||+|++
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~---~~~~--~~~~~~~~~~~~v~-~~~~d~~~~~-p-~~D~v~~ 253 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA---EVVA--RHRLDAPDVAGRWK-VVEGDFLREV-P-HADVHVL 253 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH---HHHT--TCCCCCGGGTTSEE-EEECCTTTCC-C-CCSEEEE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH---HHhh--cccccccCCCCCeE-EEecCCCCCC-C-CCcEEEE
Confidence 33567999999999999999988654 78888884 3544 33333233322222 3344443333 3 8999999
Q ss_pred cCcCCCCCCh--HHHHHHHHHhccCC
Q 030935 146 ADVFYDASGK--ICAFEILICSLFPI 169 (169)
Q Consensus 146 sd~iy~~~~~--~~l~~~l~~~L~p~ 169 (169)
+.++|+..+. ..+++.++++|+|+
T Consensus 254 ~~vlh~~~d~~~~~~L~~~~~~Lkpg 279 (348)
T 3lst_A 254 KRILHNWGDEDSVRILTNCRRVMPAH 279 (348)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHTCCTT
T ss_pred ehhccCCCHHHHHHHHHHHHHhcCCC
Confidence 9999988777 69999999999996
No 223
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.07 E-value=3.3e-11 Score=92.17 Aligned_cols=95 Identities=8% Similarity=-0.113 Sum_probs=62.0
Q ss_pred CCCeEEEECCCCCHHHHHHHH--hCCeEEEEcCCCcHHHHHHH---HHHHHHhCCc-ceEEEEEcCCCCcCCCCCCCcEE
Q 030935 70 SGANVVELGAGTSLPGLVAAK--VGSNVTLTDDSNRIEVLKNM---RRVCEMNKLN-CRVMGLTWGFLDASIFDLNPNII 143 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~--~ga~V~~~D~~~~~~~l~~~---~~n~~~n~~~-~~~~~l~~~~~~~~~~~~~fDlI 143 (169)
++.+|||||||+|..++.+++ .+++|+++|+++ +.|++.+ +++++.+++. +.+ ..++.... ....+|.|
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~-~~ml~~A~~A~~~~~~~~~~~v~~---~~~d~~~l-~~~~~d~v 98 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVK-ENLFDISKKIIKKPSKGGLSNVVF---VIAAAESL-PFELKNIA 98 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCC-GGGHHHHHHHTSCGGGTCCSSEEE---ECCBTTBC-CGGGTTCE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCH-HHHHHHHHHHHHHHHHcCCCCeEE---EEcCHHHh-hhhccCeE
Confidence 567999999999999999985 456899999995 2477666 7777766664 333 33333221 11123544
Q ss_pred EEcCcCCCC--------CChHHHHHHHHHhccCC
Q 030935 144 LGADVFYDA--------SGKICAFEILICSLFPI 169 (169)
Q Consensus 144 i~sd~iy~~--------~~~~~l~~~l~~~L~p~ 169 (169)
.+-.+.|.. ...+.+++.+.+.||||
T Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpG 132 (225)
T 3p2e_A 99 DSISILFPWGTLLEYVIKPNRDILSNVADLAKKE 132 (225)
T ss_dssp EEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEE
T ss_pred EEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCC
Confidence 443333321 23456899999999996
No 224
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.07 E-value=1.7e-10 Score=92.61 Aligned_cols=92 Identities=20% Similarity=0.203 Sum_probs=66.2
Q ss_pred CeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhC-CcceEEEEEcCCCCc---CCCCCCCcEEEE
Q 030935 72 ANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNK-LNCRVMGLTWGFLDA---SIFDLNPNIILG 145 (169)
Q Consensus 72 ~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~-~~~~~~~l~~~~~~~---~~~~~~fDlIi~ 145 (169)
.+|||||||+|.++..+++. +.+|+++|++ +.+++.+++++..+. ..++ +..++... ...+.+||+|++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEid--p~vi~~Ar~~~~~~~~~rv~---v~~~Da~~~l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELD--AELARLSREWFDIPRAPRVK---IRVDDARMVAESFTPASRDVIIR 165 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESC--HHHHHHHHHHSCCCCTTTEE---EEESCHHHHHHTCCTTCEEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECC--HHHHHHHHHhccccCCCceE---EEECcHHHHHhhccCCCCCEEEE
Confidence 49999999999999999983 5699999999 679999999886542 2233 33444322 223468999997
Q ss_pred cCcCCC---CCC--hHHHHHHHHHhccCC
Q 030935 146 ADVFYD---ASG--KICAFEILICSLFPI 169 (169)
Q Consensus 146 sd~iy~---~~~--~~~l~~~l~~~L~p~ 169 (169)
|+... ... ...+++.+++.|+|+
T Consensus 166 -D~~~~~~~~~~L~t~efl~~~~r~Lkpg 193 (317)
T 3gjy_A 166 -DVFAGAITPQNFTTVEFFEHCHRGLAPG 193 (317)
T ss_dssp -CCSTTSCCCGGGSBHHHHHHHHHHEEEE
T ss_pred -CCCCccccchhhhHHHHHHHHHHhcCCC
Confidence 43322 112 278999999999985
No 225
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.06 E-value=4.3e-10 Score=93.54 Aligned_cols=111 Identities=10% Similarity=-0.041 Sum_probs=77.0
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCC
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGF 130 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~ 130 (169)
+++..++..+. ..++.+|||+|||+|..+..+++.+ .+|+++|+++. +++.+++|++.+++.+.+...+...
T Consensus 233 ~~s~~~~~~l~----~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~--~l~~~~~~~~~~g~~~~~~~~D~~~ 306 (429)
T 1sqg_A 233 ASAQGCMTWLA----PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQ--RLSRVYDNLKRLGMKATVKQGDGRY 306 (429)
T ss_dssp HHHHTHHHHHC----CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTT--THHHHHHHHHHTTCCCEEEECCTTC
T ss_pred HHHHHHHHHcC----CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHH--HHHHHHHHHHHcCCCeEEEeCchhh
Confidence 34555555442 3467899999999999999999875 59999999965 9999999999998876544333332
Q ss_pred CCcCCCCCCCcEEEEcCc------CCCCCCh----------------HHHHHHHHHhccCC
Q 030935 131 LDASIFDLNPNIILGADV------FYDASGK----------------ICAFEILICSLFPI 169 (169)
Q Consensus 131 ~~~~~~~~~fDlIi~sd~------iy~~~~~----------------~~l~~~l~~~L~p~ 169 (169)
......+.+||+|++.-+ +....+. ..+++.+.+.|+||
T Consensus 307 ~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpG 367 (429)
T 1sqg_A 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 (429)
T ss_dssp THHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE
T ss_pred chhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 211122358999996322 2222222 47788888889885
No 226
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.05 E-value=1.2e-10 Score=96.45 Aligned_cols=88 Identities=14% Similarity=0.138 Sum_probs=64.3
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHh--CCcceEEEEEcCC
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMN--KLNCRVMGLTWGF 130 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n--~~~~~~~~l~~~~ 130 (169)
.++..++.|...... +|.+|||+|||+|..++.+++.+++|+++|++ +.+++.+++|++.+ ++. + ..+..++
T Consensus 78 at~e~vA~~~a~~l~--~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s--~~~l~~Ar~N~~~~~~gl~-~-i~~i~~D 151 (410)
T 3ll7_A 78 SSGAVTSSYKSRFIR--EGTKVVDLTGGLGIDFIALMSKASQGIYIERN--DETAVAARHNIPLLLNEGK-D-VNILTGD 151 (410)
T ss_dssp SCCHHHHHHGGGGSC--TTCEEEESSCSSSHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHHSCTTC-E-EEEEESC
T ss_pred cCHHHHHHHHHHhcC--CCCEEEEeCCCchHHHHHHHhcCCEEEEEECC--HHHHHHHHHhHHHhccCCC-c-EEEEECc
Confidence 345566666443221 38899999999999999999999999999999 67999999999988 762 2 2244454
Q ss_pred CCcCCC---CCCCcEEEEc
Q 030935 131 LDASIF---DLNPNIILGA 146 (169)
Q Consensus 131 ~~~~~~---~~~fDlIi~s 146 (169)
...... ..+||+|++.
T Consensus 152 a~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 152 FKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp GGGSHHHHHHHCCSEEEEC
T ss_pred HHHhhhhccCCCceEEEEC
Confidence 433211 2489999974
No 227
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.05 E-value=1.1e-09 Score=91.76 Aligned_cols=108 Identities=12% Similarity=0.003 Sum_probs=74.5
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh--C-CeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEc
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV--G-SNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTW 128 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~--g-a~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~ 128 (169)
+++..++..+ ...++.+|||+|||+|..++.+++. + .+|+++|++ +.+++.+++|++.+++. +.+ ..
T Consensus 246 ~~s~l~~~~l----~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s--~~~l~~~~~~~~~~g~~~v~~---~~ 316 (450)
T 2yxl_A 246 EASAVASIVL----DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVD--KMRMKRLKDFVKRMGIKIVKP---LV 316 (450)
T ss_dssp HHHHHHHHHH----CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSC--HHHHHHHHHHHHHTTCCSEEE---EC
T ss_pred chhHHHHHhc----CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCC--HHHHHHHHHHHHHcCCCcEEE---EE
Confidence 3445555544 2346789999999999999998885 3 589999999 56999999999998874 333 33
Q ss_pred CCCCcC---CCCCCCcEEEEc------CcCCCCCCh----------------HHHHHHHHHhccCC
Q 030935 129 GFLDAS---IFDLNPNIILGA------DVFYDASGK----------------ICAFEILICSLFPI 169 (169)
Q Consensus 129 ~~~~~~---~~~~~fDlIi~s------d~iy~~~~~----------------~~l~~~l~~~L~p~ 169 (169)
++.... ..+.+||+|++. .++....+. ..+++.+.+.|+||
T Consensus 317 ~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 382 (450)
T 2yxl_A 317 KDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG 382 (450)
T ss_dssp SCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE
T ss_pred cChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 333222 222579999962 223322222 57888899999885
No 228
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.04 E-value=2e-10 Score=94.79 Aligned_cols=93 Identities=9% Similarity=-0.029 Sum_probs=70.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--CC-eEEEEcCCCcHHHHHHHHHHHHHhCCcce-EEEEEcCCCCcC---CCCCCCcE
Q 030935 70 SGANVVELGAGTSLPGLVAAKV--GS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCR-VMGLTWGFLDAS---IFDLNPNI 142 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~--ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~-~~~l~~~~~~~~---~~~~~fDl 142 (169)
+|.+|||++||+|..|+.+++. |+ +|+++|++ +.+++.+++|++.|++..+ +. ...++.... ....+||+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~--~~av~~~~~N~~~Ngl~~~~v~-v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDIS--SKAIEIMKENFKLNNIPEDRYE-IHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSC--HHHHHHHHHHHHHTTCCGGGEE-EECSCHHHHHHSCCSSCEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHhCCCCceEE-EEeCCHHHHHHHhhCCCCcE
Confidence 4679999999999999999985 54 89999999 6799999999999998643 33 334443221 12348999
Q ss_pred EEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 143 ILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
|+. |+ | .....+++...+.|+|+
T Consensus 129 V~l-DP-~--g~~~~~l~~a~~~Lk~g 151 (392)
T 3axs_A 129 VDL-DP-F--GTPVPFIESVALSMKRG 151 (392)
T ss_dssp EEE-CC-S--SCCHHHHHHHHHHEEEE
T ss_pred EEE-CC-C--cCHHHHHHHHHHHhCCC
Confidence 997 65 4 33467888888888764
No 229
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.04 E-value=4.6e-10 Score=84.15 Aligned_cols=79 Identities=14% Similarity=-0.013 Sum_probs=59.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcCc
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGADV 148 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd~ 148 (169)
.++.+|||+|||+|..+..+ +.+|+++|+++. .+.+...+..+ .+..+.+||+|+++.+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l---~~~v~~~D~s~~----------------~~~~~~~d~~~--~~~~~~~fD~v~~~~~ 124 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI---RNPVHCFDLASL----------------DPRVTVCDMAQ--VPLEDESVDVAVFCLS 124 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC---CSCEEEEESSCS----------------STTEEESCTTS--CSCCTTCEEEEEEESC
T ss_pred CCCCeEEEECCcCCHHHHHh---hccEEEEeCCCC----------------CceEEEecccc--CCCCCCCEeEEEEehh
Confidence 35679999999999998876 368999999963 22333232222 1233458999999999
Q ss_pred CCCCCChHHHHHHHHHhccCC
Q 030935 149 FYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 149 iy~~~~~~~l~~~l~~~L~p~ 169 (169)
+++ .+...+++.+.+.|+|+
T Consensus 125 l~~-~~~~~~l~~~~~~L~~g 144 (215)
T 2zfu_A 125 LMG-TNIRDFLEEANRVLKPG 144 (215)
T ss_dssp CCS-SCHHHHHHHHHHHEEEE
T ss_pred ccc-cCHHHHHHHHHHhCCCC
Confidence 974 88899999999999985
No 230
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.04 E-value=1.7e-10 Score=92.08 Aligned_cols=96 Identities=13% Similarity=0.008 Sum_probs=66.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHH--hCC-cceEEEEEcCCCCc--CCCCCCCcE
Q 030935 70 SGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEM--NKL-NCRVMGLTWGFLDA--SIFDLNPNI 142 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~--n~~-~~~~~~l~~~~~~~--~~~~~~fDl 142 (169)
++++|||||||+|.++..+++.. .+|+++|++ +.+++.+++|+.. +++ ..++. +..++... ...+.+||+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid--~~~i~~ar~~~~~~~~~~~~~rv~-v~~~Da~~~l~~~~~~fD~ 171 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEID--EDVIQVSKKFLPGMAIGYSSSKLT-LHVGDGFEFMKQNQDAFDV 171 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESC--HHHHHHHHHHCHHHHGGGGCTTEE-EEESCHHHHHHTCSSCEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECC--HHHHHHHHHHhHHhhcccCCCcEE-EEECcHHHHHhhCCCCceE
Confidence 56799999999999999999874 589999999 6799999999765 232 11222 33344322 112458999
Q ss_pred EEEcCcCCCCC-----ChHHHHHHHHHhccCC
Q 030935 143 ILGADVFYDAS-----GKICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~iy~~~-----~~~~l~~~l~~~L~p~ 169 (169)
|++ |...... ....+++.+++.|+|+
T Consensus 172 Ii~-d~~~~~~~~~~l~~~~~l~~~~~~Lkpg 202 (304)
T 2o07_A 172 IIT-DSSDPMGPAESLFKESYYQLMKTALKED 202 (304)
T ss_dssp EEE-ECC-----------CHHHHHHHHHEEEE
T ss_pred EEE-CCCCCCCcchhhhHHHHHHHHHhccCCC
Confidence 997 4433211 2357899999999985
No 231
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.04 E-value=3.2e-10 Score=85.31 Aligned_cols=95 Identities=9% Similarity=0.031 Sum_probs=62.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHH----HHhCCc-ceEEEEEcCCCCc-CCCCCCC
Q 030935 69 FSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVC----EMNKLN-CRVMGLTWGFLDA-SIFDLNP 140 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~----~~n~~~-~~~~~l~~~~~~~-~~~~~~f 140 (169)
.++.+|||+|||+|..+..+++. +.+|+++|+++ .|++.+.+++ ..++.. +.+. .++... +.....
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~--~~l~~~~~~a~~~~~~~~~~~v~~~---~~d~~~l~~~~~~- 99 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADK--SRMEKISAKAAAKPAKGGLPNLLYL---WATAERLPPLSGV- 99 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCG--GGGHHHHHHHTSCGGGTCCTTEEEE---ECCSTTCCSCCCE-
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHHhhhhcCCCceEEE---ecchhhCCCCCCC-
Confidence 35779999999999999999998 56999999995 4887544333 233432 3333 333322 222223
Q ss_pred cEEEEcC---cCC--CCCChHHHHHHHHHhccCC
Q 030935 141 NIILGAD---VFY--DASGKICAFEILICSLFPI 169 (169)
Q Consensus 141 DlIi~sd---~iy--~~~~~~~l~~~l~~~L~p~ 169 (169)
|.|...- ..+ +..+.+.+++.+.+.|+|+
T Consensus 100 d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 133 (218)
T 3mq2_A 100 GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPG 133 (218)
T ss_dssp EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEE
T ss_pred CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCC
Confidence 6666211 111 3455588999999999985
No 232
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.04 E-value=1.3e-10 Score=91.73 Aligned_cols=95 Identities=15% Similarity=0.021 Sum_probs=66.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhC-----CcceEEEEEcCCCCcC--CCCCCC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNK-----LNCRVMGLTWGFLDAS--IFDLNP 140 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~-----~~~~~~~l~~~~~~~~--~~~~~f 140 (169)
++++|||||||+|.++..+++.. .+|+++|++ +.+++.+++++...+ ..+++ ..++.... ..+.+|
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid--~~~i~~a~~~~~~~~~~~~~~~v~~---~~~D~~~~l~~~~~~f 152 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEID--ETVIEVSKIYFKNISCGYEDKRVNV---FIEDASKFLENVTNTY 152 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESC--HHHHHHHHHHCTTTSGGGGSTTEEE---EESCHHHHHHHCCSCE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECC--HHHHHHHHHHhHHhccccCCCcEEE---EECChHHHHHhCCCCc
Confidence 56799999999999999998863 589999999 679999999876432 22333 33332221 124689
Q ss_pred cEEEEc--CcCCCCCCh--HHHHHHHHHhccCC
Q 030935 141 NIILGA--DVFYDASGK--ICAFEILICSLFPI 169 (169)
Q Consensus 141 DlIi~s--d~iy~~~~~--~~l~~~l~~~L~p~ 169 (169)
|+|++. +.+.....+ ..+++.+++.|+|+
T Consensus 153 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg 185 (283)
T 2i7c_A 153 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN 185 (283)
T ss_dssp EEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE
T ss_pred eEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC
Confidence 999982 222111222 68999999999985
No 233
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.03 E-value=2.2e-10 Score=91.07 Aligned_cols=96 Identities=14% Similarity=0.012 Sum_probs=65.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-C-CeEEEEcCCCcHHHHHHHHHHHHH--hCCc-ceEEEEEcCCCCc--CCCCCCCcE
Q 030935 70 SGANVVELGAGTSLPGLVAAKV-G-SNVTLTDDSNRIEVLKNMRRVCEM--NKLN-CRVMGLTWGFLDA--SIFDLNPNI 142 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~-g-a~V~~~D~~~~~~~l~~~~~n~~~--n~~~-~~~~~l~~~~~~~--~~~~~~fDl 142 (169)
++++|||||||+|.++..+++. + .+|+++|++ +.+++.+++|+.. ++.. .++. +..++... ...+.+||+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid--~~~~~~a~~~~~~~~~~~~~~~v~-~~~~D~~~~l~~~~~~fD~ 166 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVD--GLVIEAARKYLKQTSCGFDDPRAE-IVIANGAEYVRKFKNEFDV 166 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESC--HHHHHHHHHHCHHHHGGGGCTTEE-EEESCHHHHGGGCSSCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECC--HHHHHHHHHHhHhhccccCCCceE-EEECcHHHHHhhCCCCceE
Confidence 4579999999999999999987 3 489999999 5799999999754 2221 1222 33343221 112458999
Q ss_pred EEEcCcCCC-CC-----ChHHHHHHHHHhccCC
Q 030935 143 ILGADVFYD-AS-----GKICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~iy~-~~-----~~~~l~~~l~~~L~p~ 169 (169)
|++ |+... .. ....+++.+++.|+|+
T Consensus 167 Ii~-d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg 198 (296)
T 1inl_A 167 III-DSTDPTAGQGGHLFTEEFYQACYDALKED 198 (296)
T ss_dssp EEE-EC----------CCSHHHHHHHHHHEEEE
T ss_pred EEE-cCCCcccCchhhhhHHHHHHHHHHhcCCC
Confidence 997 43322 11 2378999999999985
No 234
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.03 E-value=1.5e-10 Score=93.04 Aligned_cols=97 Identities=14% Similarity=0.024 Sum_probs=66.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHH--hCC-cceEEEEEcCCCCcC--CCCCCCcE
Q 030935 70 SGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEM--NKL-NCRVMGLTWGFLDAS--IFDLNPNI 142 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~--n~~-~~~~~~l~~~~~~~~--~~~~~fDl 142 (169)
++++|||+|||+|.++..+++. +.+|+++|++ +.+++.+++|+.. ++. ..++ .+..++.... ..+.+||+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis--~~~l~~ar~~~~~~~~~~~~~~v-~~~~~D~~~~l~~~~~~fDv 192 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEID--ETVIEVSKIYFKNISCGYEDKRV-NVFIEDASKFLENVTNTYDV 192 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESC--HHHHHHHHHHCTTTSGGGGSTTE-EEEESCHHHHHHHCCSCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECC--HHHHHHHHHHHHhhccccCCCcE-EEEEccHHHHHhhcCCCceE
Confidence 4579999999999999999986 3599999999 6799999999865 222 1122 2333443221 12458999
Q ss_pred EEEcCc--CCCCCC-h-HHHHHHHHHhccCC
Q 030935 143 ILGADV--FYDASG-K-ICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~--iy~~~~-~-~~l~~~l~~~L~p~ 169 (169)
|++.-. +..... + ..+++.+.+.|+|+
T Consensus 193 Ii~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg 223 (321)
T 2pt6_A 193 IIVDSSDPIGPAETLFNQNFYEKIYNALKPN 223 (321)
T ss_dssp EEEECCCSSSGGGGGSSHHHHHHHHHHEEEE
T ss_pred EEECCcCCCCcchhhhHHHHHHHHHHhcCCC
Confidence 997421 111111 1 78999999999985
No 235
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.02 E-value=2.4e-10 Score=90.14 Aligned_cols=96 Identities=14% Similarity=0.059 Sum_probs=66.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHh-CC--------cceEEEEEcCCCCcCCC-CC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMN-KL--------NCRVMGLTWGFLDASIF-DL 138 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n-~~--------~~~~~~l~~~~~~~~~~-~~ 138 (169)
++++|||||||+|.++..+++.+. +|+++|++ +.+++.+++++..+ ++ ..++. +..++...... +.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid--~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~-~~~~D~~~~l~~~~ 151 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEID--EDVIMVSKDLIKIDNGLLEAMLNGKHEKAK-LTIGDGFEFIKNNR 151 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESC--HHHHHHHHHHTCTTTTHHHHHHTTCCSSEE-EEESCHHHHHHHCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHhhccccccccccCCCCcEE-EEECchHHHhcccC
Confidence 567999999999999999988854 89999999 67999999988211 11 11222 33344221111 46
Q ss_pred CCcEEEEcCcCCCC---CC--hHHHHHHHHHhccCC
Q 030935 139 NPNIILGADVFYDA---SG--KICAFEILICSLFPI 169 (169)
Q Consensus 139 ~fDlIi~sd~iy~~---~~--~~~l~~~l~~~L~p~ 169 (169)
+||+|++ |..+.. .. ...+++.+++.|+|+
T Consensus 152 ~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pg 186 (281)
T 1mjf_A 152 GFDVIIA-DSTDPVGPAKVLFSEEFYRYVYDALNNP 186 (281)
T ss_dssp CEEEEEE-ECCCCC-----TTSHHHHHHHHHHEEEE
T ss_pred CeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCC
Confidence 8999997 544321 11 377899999999985
No 236
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.01 E-value=1.1e-09 Score=81.08 Aligned_cols=104 Identities=11% Similarity=-0.030 Sum_probs=66.0
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh----CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcC
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV----GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWG 129 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~----ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~ 129 (169)
++..|.+.+.+.....++.+|||||||+|.+++.+++. +.+|+++|+++. . ... .+.+...++.
T Consensus 6 ~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~--~--------~~~--~v~~~~~d~~ 73 (201)
T 2plw_A 6 AAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM--D--------PIP--NVYFIQGEIG 73 (201)
T ss_dssp THHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC--C--------CCT--TCEEEECCTT
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc--C--------CCC--CceEEEcccc
Confidence 45666666555443446779999999999999999886 358999999962 1 011 2233333332
Q ss_pred CCCc-----------------------CCCCCCCcEEEEcCcCCCCCC----h-------HHHHHHHHHhccCC
Q 030935 130 FLDA-----------------------SIFDLNPNIILGADVFYDASG----K-------ICAFEILICSLFPI 169 (169)
Q Consensus 130 ~~~~-----------------------~~~~~~fDlIi~sd~iy~~~~----~-------~~l~~~l~~~L~p~ 169 (169)
+... ...+.+||+|++...+++... . ..+++.+.+.|+|+
T Consensus 74 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkpg 147 (201)
T 2plw_A 74 KDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIG 147 (201)
T ss_dssp TTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred chhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCC
Confidence 2110 023358999998766655321 1 23678888999885
No 237
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.00 E-value=1.1e-09 Score=91.51 Aligned_cols=108 Identities=12% Similarity=-0.026 Sum_probs=78.5
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh---------------CCeEEEEcCCCcHHHHHHHHHHHHHhCC--
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV---------------GSNVTLTDDSNRIEVLKNMRRVCEMNKL-- 119 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~---------------ga~V~~~D~~~~~~~l~~~~~n~~~n~~-- 119 (169)
.++++|.+.....++.+|||.|||+|.+.+.+++. +.+++++|++ +.+++.|+.|+..+++
T Consensus 158 ~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~--~~~~~lA~~nl~l~g~~~ 235 (445)
T 2okc_A 158 PLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNT--PLVVTLASMNLYLHGIGT 235 (445)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESC--HHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCC--HHHHHHHHHHHHHhCCCc
Confidence 35666665544556789999999999999888763 3579999999 5799999999998887
Q ss_pred -cceEEEEEcCCCCcCCCCCCCcEEEEcCcCCCCCCh-----------------HHHHHHHHHhccCC
Q 030935 120 -NCRVMGLTWGFLDASIFDLNPNIILGADVFYDASGK-----------------ICAFEILICSLFPI 169 (169)
Q Consensus 120 -~~~~~~l~~~~~~~~~~~~~fDlIi~sd~iy~~~~~-----------------~~l~~~l~~~L~p~ 169 (169)
...+ ..++........+||+|+++.++...... ..+++.+.+.|+|+
T Consensus 236 ~~~~i---~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~g 300 (445)
T 2okc_A 236 DRSPI---VCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTG 300 (445)
T ss_dssp SCCSE---EECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEE
T ss_pred CCCCE---eeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccC
Confidence 3343 34444333233489999998776543221 36888888999874
No 238
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.00 E-value=3e-10 Score=90.92 Aligned_cols=96 Identities=13% Similarity=0.085 Sum_probs=67.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHH-hC--C-cceEEEEEcCCCCcC--CCCCCCc
Q 030935 70 SGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEM-NK--L-NCRVMGLTWGFLDAS--IFDLNPN 141 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~-n~--~-~~~~~~l~~~~~~~~--~~~~~fD 141 (169)
++++|||||||+|.++..+++. +.+|+++|++ +.+++.+++++.. ++ . ..++. +..++.... ..+.+||
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid--~~~i~~ar~~~~~~~~~~~~~~~v~-~~~~D~~~~l~~~~~~fD 153 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDID--GELVEVAKRHMPEWHQGAFDDPRAV-LVIDDARAYLERTEERYD 153 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESC--HHHHHHHHHHCHHHHTTGGGCTTEE-EEESCHHHHHHHCCCCEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECC--HHHHHHHHHHhHhhccccccCCceE-EEEchHHHHHHhcCCCcc
Confidence 4579999999999999999986 3589999999 5799999998764 22 1 11222 333443221 1245899
Q ss_pred EEEEcCcCCCC---CC-----hHHHHHHHHHhccCC
Q 030935 142 IILGADVFYDA---SG-----KICAFEILICSLFPI 169 (169)
Q Consensus 142 lIi~sd~iy~~---~~-----~~~l~~~l~~~L~p~ 169 (169)
+|++. ..... .. ...+++.+++.|+|+
T Consensus 154 ~Ii~d-~~~~~~~~~~~~~l~~~~~l~~~~~~Lkpg 188 (314)
T 1uir_A 154 VVIID-LTDPVGEDNPARLLYTVEFYRLVKAHLNPG 188 (314)
T ss_dssp EEEEE-CCCCBSTTCGGGGGSSHHHHHHHHHTEEEE
T ss_pred EEEEC-CCCcccccCcchhccHHHHHHHHHHhcCCC
Confidence 99985 33322 11 478999999999985
No 239
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.99 E-value=6.5e-10 Score=86.69 Aligned_cols=57 Identities=11% Similarity=0.098 Sum_probs=47.3
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHH
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEM 116 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~ 116 (169)
+++.+.......++.+|||+|||+|.++..+++.+++|+++|++ ++|++.+++++..
T Consensus 17 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid--~~~~~~~~~~~~~ 73 (255)
T 3tqs_A 17 VLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEID--RDLVAFLQKKYNQ 73 (255)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECC--HHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECC--HHHHHHHHHHHhh
Confidence 33444444445578899999999999999999999999999999 5799999998864
No 240
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.99 E-value=2.2e-09 Score=79.99 Aligned_cols=101 Identities=13% Similarity=0.017 Sum_probs=66.9
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA 133 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~ 133 (169)
++..|.+.+.+.....++.+|||||||+|.+++.+++.+++|+++|+++. . .. ..+.+. .++...
T Consensus 9 a~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~--~--------~~--~~v~~~---~~D~~~ 73 (191)
T 3dou_A 9 AAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEM--E--------EI--AGVRFI---RCDIFK 73 (191)
T ss_dssp HHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCC--C--------CC--TTCEEE---ECCTTS
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccc--c--------cC--CCeEEE---EccccC
Confidence 56677777666544457889999999999999999999889999999963 1 01 123333 333322
Q ss_pred CC--------CC----CCCcEEEEcCcCCCCCC-----------hHHHHHHHHHhccCC
Q 030935 134 SI--------FD----LNPNIILGADVFYDASG-----------KICAFEILICSLFPI 169 (169)
Q Consensus 134 ~~--------~~----~~fDlIi~sd~iy~~~~-----------~~~l~~~l~~~L~p~ 169 (169)
.. .. .+||+|++......... .+.+++...+.|+||
T Consensus 74 ~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpG 132 (191)
T 3dou_A 74 ETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNG 132 (191)
T ss_dssp SSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred HHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCC
Confidence 11 11 38999998554322211 245677778888885
No 241
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.98 E-value=2.8e-10 Score=91.25 Aligned_cols=96 Identities=15% Similarity=0.005 Sum_probs=64.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHh--CC-cceEEEEEcCCCCcC--CCCCCCcE
Q 030935 70 SGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMN--KL-NCRVMGLTWGFLDAS--IFDLNPNI 142 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n--~~-~~~~~~l~~~~~~~~--~~~~~fDl 142 (169)
++++|||||||+|.++..+++. ..+|+++|++ +.+++.+++++... ++ ..++ .+..++.... ..+.+||+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid--~~~i~~Ar~~~~~~~~~~~~~rv-~~~~~D~~~~l~~~~~~fD~ 184 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEID--EMVIDVAKKFLPGMSCGFSHPKL-DLFCGDGFEFLKNHKNEFDV 184 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSC--HHHHHHHHHHCTTTSGGGGCTTE-EEECSCHHHHHHHCTTCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECC--HHHHHHHHHHHHHhccccCCCCE-EEEEChHHHHHHhcCCCceE
Confidence 4579999999999999999886 3599999999 67999999998643 22 1122 2344443221 13458999
Q ss_pred EEEcCcCCCC---CC-h-HHHHHHHHHhccCC
Q 030935 143 ILGADVFYDA---SG-K-ICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~iy~~---~~-~-~~l~~~l~~~L~p~ 169 (169)
|++ |..... .. + ..+++.+++.|+|+
T Consensus 185 Ii~-d~~~~~~~~~~l~t~~~l~~~~~~Lkpg 215 (314)
T 2b2c_A 185 IIT-DSSDPVGPAESLFGQSYYELLRDALKED 215 (314)
T ss_dssp EEE-CCC-------------HHHHHHHHEEEE
T ss_pred EEE-cCCCCCCcchhhhHHHHHHHHHhhcCCC
Confidence 997 443211 11 2 78899999999985
No 242
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.97 E-value=2.8e-09 Score=82.35 Aligned_cols=59 Identities=14% Similarity=0.008 Sum_probs=49.3
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHH
Q 030935 56 VILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEM 116 (169)
Q Consensus 56 ~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~ 116 (169)
..+++.+.......++.+|||+|||+|.++..+++.+.+|+++|++ +++++.+++|+..
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~--~~~~~~a~~~~~~ 74 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEID--HKLCKTTENKLVD 74 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSC--HHHHHHHHHHTTT
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECC--HHHHHHHHHhhcc
Confidence 3455566665555678899999999999999999999999999999 5699999998763
No 243
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.96 E-value=1.6e-09 Score=79.89 Aligned_cols=101 Identities=14% Similarity=0.042 Sum_probs=64.4
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-C----------CeEEEEcCCCcHHHHHHHHHHHHHhCCcceE
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-G----------SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRV 123 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-g----------a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~ 123 (169)
+..|.+.........++.+|||+|||+|.+++.+++. + .+|+++|+++. . ... .+++
T Consensus 7 ~~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~--~--------~~~--~~~~ 74 (196)
T 2nyu_A 7 AFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI--F--------PLE--GATF 74 (196)
T ss_dssp HHHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC--C--------CCT--TCEE
T ss_pred HHHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc--c--------cCC--CCeE
Confidence 4455555554444456889999999999999999986 4 68999999962 1 001 1222
Q ss_pred EEEEcCCCCcC---------CCCCCCcEEEEcCcCCCCCCh-----------HHHHHHHHHhccCC
Q 030935 124 MGLTWGFLDAS---------IFDLNPNIILGADVFYDASGK-----------ICAFEILICSLFPI 169 (169)
Q Consensus 124 ~~l~~~~~~~~---------~~~~~fDlIi~sd~iy~~~~~-----------~~l~~~l~~~L~p~ 169 (169)
. ..++.... ..+.+||+|++...++..... ..+++.+.+.|+|+
T Consensus 75 ~--~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 138 (196)
T 2nyu_A 75 L--CPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG 138 (196)
T ss_dssp E--CSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred E--EeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 2 02332211 123489999986554432221 47888899999985
No 244
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.96 E-value=1.8e-10 Score=90.26 Aligned_cols=113 Identities=16% Similarity=-0.056 Sum_probs=70.5
Q ss_pred eeecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHH---HhCCcceEEE
Q 030935 49 LFVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCE---MNKLNCRVMG 125 (169)
Q Consensus 49 ~~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~---~n~~~~~~~~ 125 (169)
...-.++..|.+.+.. ....++.+|||||||+|.++..+++. .+|+++|+++ |+..++++.. ..+.++.+.
T Consensus 54 ~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~---m~~~a~~~~~~~~~~~~~v~~~- 127 (265)
T 2oxt_A 54 LSVSRGTAKLAWMEER-GYVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT---LGVGGHEVPRITESYGWNIVKF- 127 (265)
T ss_dssp BCSSTHHHHHHHHHHH-TSCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC---CCCSSCCCCCCCCBTTGGGEEE-
T ss_pred CccchHHHHHHHHHHc-CCCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch---hhhhhhhhhhhhhccCCCeEEE-
Confidence 3444567777776665 33446789999999999999999988 7999999995 4322211100 011122222
Q ss_pred EEcCCCCcCCCCCCCcEEEEcCcCCCCCCh----H---HHHHHHHHhccCC
Q 030935 126 LTWGFLDASIFDLNPNIILGADVFYDASGK----I---CAFEILICSLFPI 169 (169)
Q Consensus 126 l~~~~~~~~~~~~~fDlIi~sd~iy~~~~~----~---~l~~~l~~~L~p~ 169 (169)
...++... +.+.+||+|+|... +..... . .+++.+.+.|+|+
T Consensus 128 ~~~~D~~~-l~~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpG 176 (265)
T 2oxt_A 128 KSRVDIHT-LPVERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKN 176 (265)
T ss_dssp ECSCCTTT-SCCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ecccCHhH-CCCCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccC
Confidence 11444432 33568999998655 433332 1 2678888889886
No 245
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.96 E-value=2.5e-10 Score=89.34 Aligned_cols=90 Identities=12% Similarity=0.001 Sum_probs=65.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHH--hCC-cceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEM--NKL-NCRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~--n~~-~~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
.+++|||||||+|.++..+++.+.+|+++|++ +++++.+++++.. ++. ..++ .+..++..... .+||+|++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid--~~~i~~ar~~~~~~~~~~~~~rv-~~~~~D~~~~~--~~fD~Ii~d 146 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQAD--EKILDSFISFFPHFHEVKNNKNF-THAKQLLDLDI--KKYDLIFCL 146 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSC--HHHHGGGTTTSTTHHHHHTCTTE-EEESSGGGSCC--CCEEEEEES
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECC--HHHHHHHHHHHHhhccccCCCeE-EEEechHHHHH--hhCCEEEEC
Confidence 45799999999999999888776789999999 5799999887642 111 1122 24455543332 689999974
Q ss_pred CcCCCCCChHHHHHHHHHhccCC
Q 030935 147 DVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
. .+...+++.+++.|+|+
T Consensus 147 -~----~dp~~~~~~~~~~L~pg 164 (262)
T 2cmg_A 147 -Q----EPDIHRIDGLKRMLKED 164 (262)
T ss_dssp -S----CCCHHHHHHHHTTEEEE
T ss_pred -C----CChHHHHHHHHHhcCCC
Confidence 2 33456899999999985
No 246
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.95 E-value=1.4e-09 Score=91.46 Aligned_cols=107 Identities=13% Similarity=-0.021 Sum_probs=74.3
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh--C-CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCC
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV--G-SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGF 130 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~--g-a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~ 130 (169)
++..++..+. ..++.+|||+|||+|..++.+|+. + .+|+++|++ +.+++.+++|++.+++.+. +..++
T Consensus 89 ss~l~a~~L~----~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis--~~~l~~a~~n~~r~G~~v~---~~~~D 159 (464)
T 3m6w_A 89 SAQAVGVLLD----PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVD--GKRVRGLLENVERWGAPLA---VTQAP 159 (464)
T ss_dssp TTHHHHHHHC----CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSC--HHHHHHHHHHHHHHCCCCE---EECSC
T ss_pred HHHHHHHhcC----cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHcCCeEE---EEECC
Confidence 4555555542 336789999999999999999875 2 489999999 5699999999999998733 33333
Q ss_pred CCcC--CCCCCCcEEEEcCc------CCCCCC----------------hHHHHHHHHHhccCC
Q 030935 131 LDAS--IFDLNPNIILGADV------FYDASG----------------KICAFEILICSLFPI 169 (169)
Q Consensus 131 ~~~~--~~~~~fDlIi~sd~------iy~~~~----------------~~~l~~~l~~~L~p~ 169 (169)
.... ..+.+||+|++.-+ +....+ ...+++.+.+.|+||
T Consensus 160 a~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG 222 (464)
T 3m6w_A 160 PRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPG 222 (464)
T ss_dssp HHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred HHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2221 13468999996222 111111 266888888888885
No 247
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.94 E-value=2.4e-10 Score=90.07 Aligned_cols=114 Identities=14% Similarity=-0.060 Sum_probs=69.0
Q ss_pred ceeecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHH---hCCcceEE
Q 030935 48 GLFVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEM---NKLNCRVM 124 (169)
Q Consensus 48 g~~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~---n~~~~~~~ 124 (169)
|..+-.++..|.+.+.. ....++.+|||||||+|.++..+++. .+|+++|+++ |+..++++... .+.++.+.
T Consensus 61 ~~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~---m~~~a~~~~~~~~~~~~~v~~~ 135 (276)
T 2wa2_A 61 GHAVSRGTAKLAWIDER-GGVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT---LGTSGHEKPRLVETFGWNLITF 135 (276)
T ss_dssp ----CHHHHHHHHHHHT-TSCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC---CCCTTSCCCCCCCCTTGGGEEE
T ss_pred CCcCchHHHHHHHHHHc-CCCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch---hhhhhhhchhhhhhcCCCeEEE
Confidence 33445566777766654 33446889999999999999999988 7999999995 43222211100 01123322
Q ss_pred EEEcCCCCcCCCCCCCcEEEEcCcCCCCCCh----H---HHHHHHHHhccCC
Q 030935 125 GLTWGFLDASIFDLNPNIILGADVFYDASGK----I---CAFEILICSLFPI 169 (169)
Q Consensus 125 ~l~~~~~~~~~~~~~fDlIi~sd~iy~~~~~----~---~l~~~l~~~L~p~ 169 (169)
...++... +.+.+||+|+|.-. +..... . .+++.+.+.|+|+
T Consensus 136 -~~~~D~~~-l~~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpG 184 (276)
T 2wa2_A 136 -KSKVDVTK-MEPFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYN 184 (276)
T ss_dssp -ECSCCGGG-CCCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred -eccCcHhh-CCCCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccC
Confidence 11344432 23568999998655 433321 1 2678888889886
No 248
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.93 E-value=1.1e-09 Score=85.59 Aligned_cols=80 Identities=19% Similarity=0.199 Sum_probs=55.0
Q ss_pred CC--CeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHH-------hC-CcceEEEEEcCCCCc--CCCC
Q 030935 70 SG--ANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEM-------NK-LNCRVMGLTWGFLDA--SIFD 137 (169)
Q Consensus 70 ~~--~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~-------n~-~~~~~~~l~~~~~~~--~~~~ 137 (169)
++ .+|||+|||+|..++.+++.|++|+++|.+ +.+.+.+++|++. |+ +..++. +..++... ....
T Consensus 86 ~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~--~~~~~l~~~~l~~a~~~~~~~~~l~~~i~-~~~~D~~~~L~~~~ 162 (258)
T 2oyr_A 86 GDYLPDVVDATAGLGRDAFVLASVGCRVRMLERN--PVVAALLDDGLARGYADAEIGGWLQERLQ-LIHASSLTALTDIT 162 (258)
T ss_dssp TTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECC--HHHHHHHHHHHHHHHHCTTTHHHHHHHEE-EEESCHHHHSTTCS
T ss_pred CCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHHHHhhHhhhhhhhcCEE-EEECCHHHHHHhCc
Confidence 55 799999999999999999999999999999 5577777666542 22 211222 33444322 1122
Q ss_pred CCCcEEEEcCcCCCCC
Q 030935 138 LNPNIILGADVFYDAS 153 (169)
Q Consensus 138 ~~fDlIi~sd~iy~~~ 153 (169)
.+||+|+. |+.|...
T Consensus 163 ~~fDvV~l-DP~y~~~ 177 (258)
T 2oyr_A 163 PRPQVVYL-DPMFPHK 177 (258)
T ss_dssp SCCSEEEE-CCCCCCC
T ss_pred ccCCEEEE-cCCCCCc
Confidence 37999997 6777554
No 249
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.92 E-value=2.5e-09 Score=84.07 Aligned_cols=84 Identities=15% Similarity=0.203 Sum_probs=58.9
Q ss_pred HHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCC--
Q 030935 60 EYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFD-- 137 (169)
Q Consensus 60 ~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~-- 137 (169)
+.+.+.....++ +|||+|||+|.++..+++.+++|+++|+++ +|++.+++++.. .+++ +..++......+
T Consensus 37 ~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~--~~~~~l~~~~~~--~~v~---vi~~D~l~~~~~~~ 108 (271)
T 3fut_A 37 RRIVEAARPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDL--RLRPVLEETLSG--LPVR---LVFQDALLYPWEEV 108 (271)
T ss_dssp HHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCG--GGHHHHHHHTTT--SSEE---EEESCGGGSCGGGS
T ss_pred HHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCH--HHHHHHHHhcCC--CCEE---EEECChhhCChhhc
Confidence 334444445567 999999999999999999999999999995 599999998762 2233 334444332122
Q ss_pred CCCcEEEEcCcCCCC
Q 030935 138 LNPNIILGADVFYDA 152 (169)
Q Consensus 138 ~~fDlIi~sd~iy~~ 152 (169)
..+|.|+++ +.|+.
T Consensus 109 ~~~~~iv~N-lPy~i 122 (271)
T 3fut_A 109 PQGSLLVAN-LPYHI 122 (271)
T ss_dssp CTTEEEEEE-ECSSC
T ss_pred cCccEEEec-Ccccc
Confidence 268888875 45555
No 250
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.91 E-value=1.5e-09 Score=87.65 Aligned_cols=86 Identities=17% Similarity=0.166 Sum_probs=66.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcC
Q 030935 70 SGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGAD 147 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd 147 (169)
++.+|||+|||+|..+..+++. +.+++++|+ + .+++.+++. . .++ +..++...+.. .||+|+++.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~--~~~~~a~~~---~--~v~---~~~~d~~~~~p--~~D~v~~~~ 254 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-P--QVVENLSGS---N--NLT---YVGGDMFTSIP--NADAVLLKY 254 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H--HHHTTCCCB---T--TEE---EEECCTTTCCC--CCSEEEEES
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-H--HHHhhcccC---C--CcE---EEeccccCCCC--CccEEEeeh
Confidence 4579999999999999999886 458999999 4 488776641 1 133 33344433322 499999999
Q ss_pred cCCCCCChH--HHHHHHHHhccC
Q 030935 148 VFYDASGKI--CAFEILICSLFP 168 (169)
Q Consensus 148 ~iy~~~~~~--~l~~~l~~~L~p 168 (169)
++|+..+.+ .+++.++++|+|
T Consensus 255 ~lh~~~d~~~~~~l~~~~~~L~p 277 (352)
T 1fp2_A 255 ILHNWTDKDCLRILKKCKEAVTN 277 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHSG
T ss_pred hhccCCHHHHHHHHHHHHHhCCC
Confidence 999888777 999999999999
No 251
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.91 E-value=8.9e-09 Score=86.94 Aligned_cols=110 Identities=11% Similarity=-0.032 Sum_probs=73.5
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCC
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGF 130 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~ 130 (169)
++..++..+... ..++.+|||+|||+|..++.+++. +.+|+++|++ +.+++.+++|++.+++.. +. +..++
T Consensus 103 ~s~l~~~~L~~~--~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis--~~~l~~~~~n~~r~g~~n-v~-~~~~D 176 (479)
T 2frx_A 103 SSMLPVAALFAD--GNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFS--ASRVKVLHANISRCGISN-VA-LTHFD 176 (479)
T ss_dssp HHHHHHHHHTTT--TCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSS--HHHHHHHHHHHHHHTCCS-EE-EECCC
T ss_pred HHHHHHHHhCcc--cCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHcCCCc-EE-EEeCC
Confidence 344445544221 126789999999999999998885 2589999999 569999999999988752 22 33333
Q ss_pred CCcC--CCCCCCcEEEEcCcC------CCCCC----------------hHHHHHHHHHhccCC
Q 030935 131 LDAS--IFDLNPNIILGADVF------YDASG----------------KICAFEILICSLFPI 169 (169)
Q Consensus 131 ~~~~--~~~~~fDlIi~sd~i------y~~~~----------------~~~l~~~l~~~L~p~ 169 (169)
.... ..+.+||.|++.-+. ....+ ...+++.+.+.|+||
T Consensus 177 ~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 239 (479)
T 2frx_A 177 GRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPG 239 (479)
T ss_dssp STTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred HHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3221 134589999973222 11111 246788888889885
No 252
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.90 E-value=1.5e-08 Score=82.16 Aligned_cols=96 Identities=14% Similarity=0.044 Sum_probs=71.1
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCC--eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEE
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKVGS--NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILG 145 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~ga--~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~ 145 (169)
....++|||+|||+|..++.+++... ++++.|. |.+++.+++++...+. .++ .+.-+++.... ...+|+|+.
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl---p~v~~~a~~~~~~~~~-~rv-~~~~gD~~~~~-~~~~D~~~~ 250 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI---PEVVWTAKQHFSFQEE-EQI-DFQEGDFFKDP-LPEADLYIL 250 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC---HHHHHHHHHHSCC--C-CSE-EEEESCTTTSC-CCCCSEEEE
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC---HHHHHHHHHhhhhccc-Cce-eeecCccccCC-CCCceEEEe
Confidence 33557999999999999999998754 6777777 5699999988764432 222 24445554432 236899999
Q ss_pred cCcCCCCCCh--HHHHHHHHHhccCC
Q 030935 146 ADVFYDASGK--ICAFEILICSLFPI 169 (169)
Q Consensus 146 sd~iy~~~~~--~~l~~~l~~~L~p~ 169 (169)
+.++|+..+- ..+++.++++|+|+
T Consensus 251 ~~vlh~~~d~~~~~iL~~~~~al~pg 276 (353)
T 4a6d_A 251 ARVLHDWADGKCSHLLERIYHTCKPG 276 (353)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHCCTT
T ss_pred eeecccCCHHHHHHHHHHHHhhCCCC
Confidence 9999977654 57899999999996
No 253
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.90 E-value=1.3e-09 Score=88.84 Aligned_cols=88 Identities=15% Similarity=0.011 Sum_probs=66.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCC--eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVGS--NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~ga--~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
.++.+|||+|||+|..+..+++.+. +++++|+ + .+++.+++. ..++ +..++...+. + .||+|+++
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~--~~~~~a~~~-----~~v~---~~~~d~~~~~-~-~~D~v~~~ 274 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-P--QVIENAPPL-----SGIE---HVGGDMFASV-P-QGDAMILK 274 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H--HHHTTCCCC-----TTEE---EEECCTTTCC-C-CEEEEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-H--HHHHhhhhc-----CCCE---EEeCCcccCC-C-CCCEEEEe
Confidence 3567999999999999999998764 7888898 3 488766541 1233 3344544332 2 39999999
Q ss_pred CcCCCCCChH--HHHHHHHHhccCC
Q 030935 147 DVFYDASGKI--CAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~~~~--~l~~~l~~~L~p~ 169 (169)
.++|+..+.+ .+++.++++|+|+
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L~pg 299 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKALSPN 299 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCC
Confidence 9999888777 9999999999985
No 254
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.90 E-value=4.6e-09 Score=88.15 Aligned_cols=109 Identities=13% Similarity=-0.039 Sum_probs=74.3
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcC
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWG 129 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~ 129 (169)
+++..++..+. ..+|.+|||+|||+|..++.+|+. ..+|+++|++ +.+++.+++|++.+++.. +. +..+
T Consensus 92 ~ss~l~~~~L~----~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis--~~rl~~~~~n~~r~g~~n-v~-v~~~ 163 (456)
T 3m4x_A 92 PSAMIVGTAAA----AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIF--PKRAKILSENIERWGVSN-AI-VTNH 163 (456)
T ss_dssp TTTHHHHHHHC----CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSS--HHHHHHHHHHHHHHTCSS-EE-EECC
T ss_pred HHHHHHHHHcC----CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCc-eE-EEeC
Confidence 34555555552 346789999999999999988875 2489999999 569999999999998863 22 3333
Q ss_pred CCCcC--CCCCCCcEEEEcCcCCCC---------------CC-------hHHHHHHHHHhccCC
Q 030935 130 FLDAS--IFDLNPNIILGADVFYDA---------------SG-------KICAFEILICSLFPI 169 (169)
Q Consensus 130 ~~~~~--~~~~~fDlIi~sd~iy~~---------------~~-------~~~l~~~l~~~L~p~ 169 (169)
+.... ..+.+||+|++.-+.... .. ...+++...+.|+||
T Consensus 164 Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG 227 (456)
T 3m4x_A 164 APAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNK 227 (456)
T ss_dssp CHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEE
T ss_pred CHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 32211 134689999974432111 11 126788888888885
No 255
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.88 E-value=2.9e-09 Score=87.62 Aligned_cols=84 Identities=8% Similarity=-0.113 Sum_probs=58.7
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCC
Q 030935 56 VILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLD 132 (169)
Q Consensus 56 ~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~ 132 (169)
..++++|.+.....++.+|||+|||+|.+++.+++. +.+|+++|+++. +++.+ ..+. +..++..
T Consensus 25 ~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~--~~~~a--------~~~~---~~~~D~~ 91 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPK--ALDLP--------PWAE---GILADFL 91 (421)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTT--TCCCC--------TTEE---EEESCGG
T ss_pred HHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHH--HHHhC--------CCCc---EEeCChh
Confidence 457777776654445679999999999999999874 359999999964 76655 1222 3334443
Q ss_pred cCCCCCCCcEEEEcCcCCCC
Q 030935 133 ASIFDLNPNIILGADVFYDA 152 (169)
Q Consensus 133 ~~~~~~~fDlIi~sd~iy~~ 152 (169)
......+||+|+++.+....
T Consensus 92 ~~~~~~~fD~Ii~NPPy~~~ 111 (421)
T 2ih2_A 92 LWEPGEAFDLILGNPPYGIV 111 (421)
T ss_dssp GCCCSSCEEEEEECCCCCCB
T ss_pred hcCccCCCCEEEECcCccCc
Confidence 33334589999998776543
No 256
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.86 E-value=1.5e-09 Score=86.56 Aligned_cols=77 Identities=12% Similarity=-0.020 Sum_probs=56.2
Q ss_pred CCCCCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC---CCCCc
Q 030935 67 YRFSGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF---DLNPN 141 (169)
Q Consensus 67 ~~~~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~---~~~fD 141 (169)
...++.+|||+|||+|..++.+++. +.+|+++|.+ +.+++.+++|++.++..+.+...++.+...... ..+||
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d--~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D 100 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVD--SEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVD 100 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESC--HHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEE
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCC
Confidence 3446789999999999999999987 4699999999 679999999998876444444333332211011 14799
Q ss_pred EEEE
Q 030935 142 IILG 145 (169)
Q Consensus 142 lIi~ 145 (169)
.|++
T Consensus 101 ~Vl~ 104 (301)
T 1m6y_A 101 GILM 104 (301)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
No 257
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.84 E-value=5.9e-09 Score=84.95 Aligned_cols=88 Identities=14% Similarity=-0.008 Sum_probs=64.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
..+.+|||+|||+|..+..+++.. .+++++|+ +.+++.++++ ..++ +..++...+.. .. |+|+++
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~-----~~v~---~~~~d~~~~~p-~~-D~v~~~ 268 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL---PHVIQDAPAF-----SGVE---HLGGDMFDGVP-KG-DAIFIK 268 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCC-----TTEE---EEECCTTTCCC-CC-SEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh---HHHHHhhhhc-----CCCE---EEecCCCCCCC-CC-CEEEEe
Confidence 345799999999999999998864 48999999 3577766532 2233 33445444333 23 999999
Q ss_pred CcCCCCCC--hHHHHHHHHHhccCC
Q 030935 147 DVFYDASG--KICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~~--~~~l~~~l~~~L~p~ 169 (169)
.++|+..+ ...+++.++++|+|+
T Consensus 269 ~vlh~~~~~~~~~~l~~~~~~L~pg 293 (368)
T 3reo_A 269 WICHDWSDEHCLKLLKNCYAALPDH 293 (368)
T ss_dssp SCGGGBCHHHHHHHHHHHHHHSCTT
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCC
Confidence 99996654 457899999999996
No 258
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.82 E-value=1.8e-08 Score=88.66 Aligned_cols=112 Identities=13% Similarity=0.075 Sum_probs=78.1
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhC----------------------------------------
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVG---------------------------------------- 92 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g---------------------------------------- 92 (169)
|-...||.-|.......++..+||.+||+|.+.+.++..+
T Consensus 173 pl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 173 PIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 3445677777766555567899999999999999888753
Q ss_pred ----CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC---CCCCCCcEEEEcCcCCC----CCChHHHHHH
Q 030935 93 ----SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS---IFDLNPNIILGADVFYD----ASGKICAFEI 161 (169)
Q Consensus 93 ----a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~---~~~~~fDlIi~sd~iy~----~~~~~~l~~~ 161 (169)
.+|+++|++ +.+++.++.|+..+++...+. +..++.... ....+||+|+++.+.-. ...+..+++.
T Consensus 253 ~~~~~~i~G~Did--~~av~~A~~N~~~agv~~~i~-~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~ 329 (703)
T 3v97_A 253 AEYSSHFYGSDSD--ARVIQRARTNARLAGIGELIT-FEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSL 329 (703)
T ss_dssp HHCCCCEEEEESC--HHHHHHHHHHHHHTTCGGGEE-EEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHH
T ss_pred ccCCccEEEEECC--HHHHHHHHHHHHHcCCCCceE-EEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHH
Confidence 479999999 679999999999999874322 333443322 11228999998666432 1245666666
Q ss_pred HHHhcc
Q 030935 162 LICSLF 167 (169)
Q Consensus 162 l~~~L~ 167 (169)
+.+.|+
T Consensus 330 l~~~lk 335 (703)
T 3v97_A 330 LGRIMK 335 (703)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655554
No 259
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.79 E-value=3.2e-10 Score=87.42 Aligned_cols=87 Identities=17% Similarity=0.113 Sum_probs=57.9
Q ss_pred HHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCC-
Q 030935 59 AEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFD- 137 (169)
Q Consensus 59 a~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~- 137 (169)
++.+.+.....++.+|||+|||+|.++..+++.+.+|+++|+++. +++.+++|+. ....+ .+..++......+
T Consensus 18 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~--~~~~a~~~~~-~~~~v---~~~~~D~~~~~~~~ 91 (245)
T 1yub_A 18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSH--LFNLSSEKLK-LNTRV---TLIHQDILQFQFPN 91 (245)
T ss_dssp HHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCS--SSSSSSCTTT-TCSEE---EECCSCCTTTTCCC
T ss_pred HHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHH--HHHHHHHHhc-cCCce---EEEECChhhcCccc
Confidence 344444444456779999999999999999999999999999965 8888887765 11122 2444554332122
Q ss_pred -CCCcEEEEcCcCCCCC
Q 030935 138 -LNPNIILGADVFYDAS 153 (169)
Q Consensus 138 -~~fDlIi~sd~iy~~~ 153 (169)
.+| .|++ ++.|+..
T Consensus 92 ~~~f-~vv~-n~Py~~~ 106 (245)
T 1yub_A 92 KQRY-KIVG-NIPYHLS 106 (245)
T ss_dssp SSEE-EEEE-ECCSSSC
T ss_pred CCCc-EEEE-eCCcccc
Confidence 367 6665 4555543
No 260
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.79 E-value=1.5e-08 Score=78.60 Aligned_cols=87 Identities=14% Similarity=0.126 Sum_probs=58.2
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhC-CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVG-SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF 136 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~g-a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~ 136 (169)
+++.+.+.....++.+|||+|||+|.++..+++.+ .+|+++|++ +.+++.++++ . ..+++ +..++......
T Consensus 19 i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid--~~~~~~~~~~-~--~~~v~---~i~~D~~~~~~ 90 (249)
T 3ftd_A 19 VLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELD--REMVENLKSI-G--DERLE---VINEDASKFPF 90 (249)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCC--HHHHHHHTTS-C--CTTEE---EECSCTTTCCG
T ss_pred HHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECC--HHHHHHHHhc-c--CCCeE---EEEcchhhCCh
Confidence 34445555555578899999999999999999996 699999999 5699999887 2 22233 34455433211
Q ss_pred CC-CCcEEEEcCcCCCC
Q 030935 137 DL-NPNIILGADVFYDA 152 (169)
Q Consensus 137 ~~-~fDlIi~sd~iy~~ 152 (169)
+. ..++++.+++.|+.
T Consensus 91 ~~~~~~~~vv~NlPy~i 107 (249)
T 3ftd_A 91 CSLGKELKVVGNLPYNV 107 (249)
T ss_dssp GGSCSSEEEEEECCTTT
T ss_pred hHccCCcEEEEECchhc
Confidence 11 11445556777765
No 261
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.77 E-value=1.6e-08 Score=82.36 Aligned_cols=88 Identities=14% Similarity=-0.047 Sum_probs=64.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
....+|||+|||+|..+..+++.. .+++++|+ +.+++.++.+ ..++ +..++...+.. .. |+|+++
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~-----~~v~---~~~~D~~~~~p-~~-D~v~~~ 266 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL---PHVISEAPQF-----PGVT---HVGGDMFKEVP-SG-DTILMK 266 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCC-----TTEE---EEECCTTTCCC-CC-SEEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC---HHHHHhhhhc-----CCeE---EEeCCcCCCCC-CC-CEEEeh
Confidence 356799999999999999998864 48999999 3577766532 2233 33445444333 23 999999
Q ss_pred CcCCCCC--ChHHHHHHHHHhccCC
Q 030935 147 DVFYDAS--GKICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~~--~~~~l~~~l~~~L~p~ 169 (169)
.++|+.. ....+++.++++|+|+
T Consensus 267 ~vlh~~~d~~~~~~L~~~~~~L~pg 291 (364)
T 3p9c_A 267 WILHDWSDQHCATLLKNCYDALPAH 291 (364)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHSCTT
T ss_pred HHhccCCHHHHHHHHHHHHHHcCCC
Confidence 9999664 4568999999999996
No 262
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.77 E-value=1.5e-08 Score=80.79 Aligned_cols=109 Identities=17% Similarity=-0.005 Sum_probs=65.7
Q ss_pred ecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcC----CCcHHHHHHHHHHHHHhCCcceEEEE
Q 030935 51 VWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDD----SNRIEVLKNMRRVCEMNKLNCRVMGL 126 (169)
Q Consensus 51 ~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~----~~~~~~l~~~~~n~~~n~~~~~~~~l 126 (169)
.-.++..|.+.+.+ ....++.+|||||||+|.++..+++. ++|+++|+ ++. ++..++ .+..+.+ .+ .+
T Consensus 64 ~sR~a~KL~~i~~~-~~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~--~~~~~~--~~~~~~~-~v-~~ 135 (305)
T 2p41_A 64 VSRGSAKLRWFVER-NLVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPG--HEEPIP--MSTYGWN-LV-RL 135 (305)
T ss_dssp SSTHHHHHHHHHHT-TSSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTT--SCCCCC--CCSTTGG-GE-EE
T ss_pred cccHHHHHHHHHHc-CCCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchh--HHHHHH--hhhcCCC-Ce-EE
Confidence 33456777776655 33445789999999999999999998 68999999 431 221110 0101111 12 23
Q ss_pred EcC-CCCcCCCCCCCcEEEEcCcCCCCCC----hH---HHHHHHHHhccCC
Q 030935 127 TWG-FLDASIFDLNPNIILGADVFYDASG----KI---CAFEILICSLFPI 169 (169)
Q Consensus 127 ~~~-~~~~~~~~~~fDlIi~sd~iy~~~~----~~---~l~~~l~~~L~p~ 169 (169)
..+ +... ....+||+|+|.-.. +... .. .+++.+.+.|+||
T Consensus 136 ~~~~D~~~-l~~~~fD~V~sd~~~-~~g~~~~d~~~~l~~L~~~~~~LkpG 184 (305)
T 2p41_A 136 QSGVDVFF-IPPERCDTLLCDIGE-SSPNPTVEAGRTLRVLNLVENWLSNN 184 (305)
T ss_dssp ECSCCTTT-SCCCCCSEEEECCCC-CCSSHHHHHHHHHHHHHHHHHHCCTT
T ss_pred Eecccccc-CCcCCCCEEEECCcc-ccCcchhhHHHHHHHHHHHHHHhCCC
Confidence 344 4332 234589999984433 2211 11 3677788999996
No 263
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.74 E-value=1.2e-08 Score=82.65 Aligned_cols=86 Identities=17% Similarity=0.103 Sum_probs=65.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGAD 147 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd 147 (169)
.+.+|||+|||+|..+..+++.. .+++++|++ .+++.+++. ..++ +..++...+. + .||+|+++.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~---~~~~~a~~~-----~~v~---~~~~d~~~~~-~-~~D~v~~~~ 259 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQP---QVVGNLTGN-----ENLN---FVGGDMFKSI-P-SADAVLLKW 259 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECH---HHHSSCCCC-----SSEE---EEECCTTTCC-C-CCSEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccH---HHHhhcccC-----CCcE---EEeCccCCCC-C-CceEEEEcc
Confidence 45799999999999999999874 389999983 477665531 1233 3344444332 2 599999999
Q ss_pred cCCCCCChH--HHHHHHHHhccC
Q 030935 148 VFYDASGKI--CAFEILICSLFP 168 (169)
Q Consensus 148 ~iy~~~~~~--~l~~~l~~~L~p 168 (169)
++|+..+.+ .+++.++++|+|
T Consensus 260 vlh~~~d~~~~~~l~~~~~~L~p 282 (358)
T 1zg3_A 260 VLHDWNDEQSLKILKNSKEAISH 282 (358)
T ss_dssp CGGGSCHHHHHHHHHHHHHHTGG
T ss_pred cccCCCHHHHHHHHHHHHHhCCC
Confidence 999888866 999999999998
No 264
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.74 E-value=1.4e-08 Score=80.11 Aligned_cols=54 Identities=9% Similarity=0.066 Sum_probs=44.4
Q ss_pred HHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCe----EEEEcCCCcHHHHHHHHHHH
Q 030935 59 AEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSN----VTLTDDSNRIEVLKNMRRVC 114 (169)
Q Consensus 59 a~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~----V~~~D~~~~~~~l~~~~~n~ 114 (169)
++.+.......++.+|||+|||+|.++..+++.+.+ |+++|++ ++|++.++++.
T Consensus 31 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid--~~~l~~a~~~~ 88 (279)
T 3uzu_A 31 IDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELD--RDLIGRLEQRF 88 (279)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECC--HHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECC--HHHHHHHHHhc
Confidence 344444444557889999999999999999998877 9999999 57999999983
No 265
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.69 E-value=9.7e-09 Score=74.69 Aligned_cols=83 Identities=13% Similarity=-0.034 Sum_probs=63.4
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-CCCCCCCcEEEEc
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-SIFDLNPNIILGA 146 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~~~~~~fDlIi~s 146 (169)
..+|.+|||+|||+ +.+|++ +.|++.++++...+ +++...+..+... ...+.+||+|+++
T Consensus 10 ~~~g~~vL~~~~g~--------------v~vD~s--~~ml~~a~~~~~~~---~~~~~~d~~~~~~~~~~~~~fD~V~~~ 70 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS--------------SPVEAL--KGLVDKLQALTGNE---GRVSVENIKQLLQSAHKESSFDIILSG 70 (176)
T ss_dssp CCTTSEEEEEECTT--------------SCHHHH--HHHHHHHHHHTTTT---SEEEEEEGGGGGGGCCCSSCEEEEEEC
T ss_pred CCCCCEEEEecCCc--------------eeeeCC--HHHHHHHHHhcccC---cEEEEechhcCccccCCCCCEeEEEEC
Confidence 34688999999996 238888 57999999876432 4555555544321 1145689999999
Q ss_pred CcCCCC-CChHHHHHHHHHhccCC
Q 030935 147 DVFYDA-SGKICAFEILICSLFPI 169 (169)
Q Consensus 147 d~iy~~-~~~~~l~~~l~~~L~p~ 169 (169)
.++++. .+.+.+++.+++.|||+
T Consensus 71 ~~l~~~~~~~~~~l~~~~r~Lkpg 94 (176)
T 2ld4_A 71 LVPGSTTLHSAEILAEIARILRPG 94 (176)
T ss_dssp CSTTCCCCCCHHHHHHHHHHEEEE
T ss_pred ChhhhcccCHHHHHHHHHHHCCCC
Confidence 999998 89999999999999996
No 266
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.66 E-value=1.1e-07 Score=82.65 Aligned_cols=99 Identities=8% Similarity=0.000 Sum_probs=69.2
Q ss_pred ccCCCCCCeEEEECCCCCHHHHHHHH---hCC---eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCC
Q 030935 65 QRYRFSGANVVELGAGTSLPGLVAAK---VGS---NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDL 138 (169)
Q Consensus 65 ~~~~~~~~~vLElGcGtGl~~l~~a~---~ga---~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~ 138 (169)
+....+++.|||+|||+|.++.++++ .++ +|+++|.++ +...+++..+.|+...++. +..++.++-..++
T Consensus 352 ~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp---~A~~a~~~v~~N~~~dkVt-VI~gd~eev~LPE 427 (637)
T 4gqb_A 352 EEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP---NAVVTLENWQFEEWGSQVT-VVSSDMREWVAPE 427 (637)
T ss_dssp GGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH---HHHHHHHHHHHHTTGGGEE-EEESCTTTCCCSS
T ss_pred ccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH---HHHHHHHHHHhccCCCeEE-EEeCcceeccCCc
Confidence 33445567899999999999555544 333 689999984 7778899999999876654 5557766555667
Q ss_pred CCcEEEEcCcC----CCCCChHHHHHHHHHhccCC
Q 030935 139 NPNIILGADVF----YDASGKICAFEILICSLFPI 169 (169)
Q Consensus 139 ~fDlIi~sd~i----y~~~~~~~l~~~l~~~L~p~ 169 (169)
++|+||+ +.+ .+...+ ..+..-.+.|||+
T Consensus 428 KVDIIVS-EwMG~fLl~E~ml-evL~Ardr~LKPg 460 (637)
T 4gqb_A 428 KADIIVS-ELLGSFADNELSP-ECLDGAQHFLKDD 460 (637)
T ss_dssp CEEEEEC-CCCBTTBGGGCHH-HHHHHHGGGEEEE
T ss_pred ccCEEEE-EcCcccccccCCH-HHHHHHHHhcCCC
Confidence 9999995 433 233333 5556667777774
No 267
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.66 E-value=6.8e-08 Score=76.01 Aligned_cols=93 Identities=12% Similarity=-0.008 Sum_probs=64.5
Q ss_pred CeEEEECCCC---CHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHHHHhCC-cceEEEEEcCCCCcCC---C----CC
Q 030935 72 ANVVELGAGT---SLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVCEMNKL-NCRVMGLTWGFLDASI---F----DL 138 (169)
Q Consensus 72 ~~vLElGcGt---Gl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~~~n~~-~~~~~~l~~~~~~~~~---~----~~ 138 (169)
.+|||||||+ |.+...+.+. +++|+++|.| +.|++.++.++..+.. .+. +...+..... . ..
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~s--p~mLa~Ar~~l~~~~~~~~~---~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDND--PIVLTLSQGLLASTPEGRTA---YVEADMLDPASILDAPELRD 154 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECC--HHHHHTTHHHHCCCSSSEEE---EEECCTTCHHHHHTCHHHHT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCC--hHHHHHHHHHhccCCCCcEE---EEEecccChhhhhccccccc
Confidence 5899999996 4555544443 5699999999 6799999988764321 233 3333332210 0 12
Q ss_pred CCc-----EEEEcCcCCCCCC---hHHHHHHHHHhccCC
Q 030935 139 NPN-----IILGADVFYDASG---KICAFEILICSLFPI 169 (169)
Q Consensus 139 ~fD-----lIi~sd~iy~~~~---~~~l~~~l~~~L~p~ 169 (169)
.|| .|+++-++|+..+ ...+++.+.+.|+||
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PG 193 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSG 193 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTT
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCC
Confidence 343 6888999999987 467999999999997
No 268
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.65 E-value=5.5e-09 Score=85.13 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=64.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHH-hC--Ccc----eEEEEEcCCCCcCC-----C
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEM-NK--LNC----RVMGLTWGFLDASI-----F 136 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~-n~--~~~----~~~~l~~~~~~~~~-----~ 136 (169)
++++||+||||+|.++..+++.++ +|+++|++ +.+++.+++|+.. ++ ++. ++ .+..++..... .
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID--~~vie~Ar~~~~~l~~~~l~dp~~~rv-~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEID--QMVIDGCKKYMRKTCGDVLDNLKGDCY-QVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESC--HHHHHHHHHHCCC----CCSSSEETTE-EEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHhccccccccCCCcE-EEEECcHHHHHHhhhcc
Confidence 567999999999999999988775 89999999 6799999999753 21 111 22 24445433322 2
Q ss_pred CCCCcEEEEcCcCC-C----CC--ChHHHHHHH----HHhccCC
Q 030935 137 DLNPNIILGADVFY-D----AS--GKICAFEIL----ICSLFPI 169 (169)
Q Consensus 137 ~~~fDlIi~sd~iy-~----~~--~~~~l~~~l----~~~L~p~ 169 (169)
..+||+||. |+.. . +. ....+++.+ .+.|+|+
T Consensus 265 ~~~fDvII~-D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pg 307 (364)
T 2qfm_A 265 GREFDYVIN-DLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQD 307 (364)
T ss_dssp TCCEEEEEE-ECCSSCCCCC----CHHHHHHHHHHHHHHTEEEE
T ss_pred CCCceEEEE-CCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCC
Confidence 458999996 5433 1 11 224566666 8899885
No 269
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.65 E-value=1.5e-07 Score=75.25 Aligned_cols=86 Identities=15% Similarity=0.061 Sum_probs=59.9
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-C--CeEEEEcCCCcHHHHHHHHHHHHHhCCc-ceEEEEEcC
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-G--SNVTLTDDSNRIEVLKNMRRVCEMNKLN-CRVMGLTWG 129 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~-~~~~~l~~~ 129 (169)
++.+++.++. ..+|.+|||+|||+|..++.+++. + .+|+++|++ +.+++.+++|++.+++. +.+...++.
T Consensus 90 ~s~l~~~~l~----~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~--~~~l~~~~~n~~r~g~~~v~~~~~D~~ 163 (309)
T 2b9e_A 90 ASCLPAMLLD----PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLD--AKRLASMATLLARAGVSCCELAEEDFL 163 (309)
T ss_dssp GGGHHHHHHC----CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHTTCCSEEEEECCGG
T ss_pred HHHHHHHHhC----CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCeEEEEeCChH
Confidence 3445555442 346789999999999999998874 2 489999999 56999999999999874 333333332
Q ss_pred CCCcCCC-CCCCcEEEE
Q 030935 130 FLDASIF-DLNPNIILG 145 (169)
Q Consensus 130 ~~~~~~~-~~~fDlIi~ 145 (169)
....... ..+||.|++
T Consensus 164 ~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 164 AVSPSDPRYHEVHYILL 180 (309)
T ss_dssp GSCTTCGGGTTEEEEEE
T ss_pred hcCccccccCCCCEEEE
Confidence 2211111 147999996
No 270
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.65 E-value=1.6e-08 Score=83.55 Aligned_cols=86 Identities=16% Similarity=0.097 Sum_probs=59.7
Q ss_pred CCCeEEEECCC------CCHHHHHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-CCC---
Q 030935 70 SGANVVELGAG------TSLPGLVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-SIF--- 136 (169)
Q Consensus 70 ~~~~vLElGcG------tGl~~l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~~~--- 136 (169)
++.+||||||| +|..++.+++. +++|+++|+++. |. ....++++. .++... ++.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~--m~--------~~~~rI~fv---~GDa~dlpf~~~l 282 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDK--SH--------VDELRIRTI---QGDQNDAEFLDRI 282 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCC--GG--------GCBTTEEEE---ECCTTCHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHH--Hh--------hcCCCcEEE---Eecccccchhhhh
Confidence 56799999999 77777766653 569999999975 52 122233333 344322 122
Q ss_pred ---CCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 137 ---DLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 137 ---~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
..+||+|++. ..++..+....++.+.+.||||
T Consensus 283 ~~~d~sFDlVisd-gsH~~~d~~~aL~el~rvLKPG 317 (419)
T 3sso_A 283 ARRYGPFDIVIDD-GSHINAHVRTSFAALFPHVRPG 317 (419)
T ss_dssp HHHHCCEEEEEEC-SCCCHHHHHHHHHHHGGGEEEE
T ss_pred hcccCCccEEEEC-CcccchhHHHHHHHHHHhcCCC
Confidence 3689999985 4566677888999999999986
No 271
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.61 E-value=1.6e-08 Score=78.65 Aligned_cols=55 Identities=11% Similarity=0.106 Sum_probs=42.9
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCe--EEEEcCCCcHHHHHHHHHHHHH
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSN--VTLTDDSNRIEVLKNMRRVCEM 116 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~--V~~~D~~~~~~~l~~~~~n~~~ 116 (169)
+++.+.+.....++.+|||+|||+|.++. +++ +.+ |+++|++ ++|++.+++++..
T Consensus 9 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid--~~~~~~a~~~~~~ 65 (252)
T 1qyr_A 9 VIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELD--RDLAARLQTHPFL 65 (252)
T ss_dssp HHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCC--HHHHHHHHTCTTT
T ss_pred HHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECC--HHHHHHHHHHhcc
Confidence 44455554445577899999999999999 654 567 9999999 5799999987754
No 272
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.60 E-value=4.2e-07 Score=77.80 Aligned_cols=94 Identities=10% Similarity=-0.077 Sum_probs=66.2
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-----CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcC
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-----GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWG 129 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-----ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~ 129 (169)
+..|++.+.......++.+|+|.+||||.+.+.+++. ..+++++|++ +.++..++.|+..+++...-..+.++
T Consensus 206 v~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid--~~~~~lA~~Nl~l~gi~~~~~~I~~g 283 (542)
T 3lkd_A 206 AKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELN--TSTYNLARMNMILHGVPIENQFLHNA 283 (542)
T ss_dssp HHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESC--HHHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred HHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECc--HHHHHHHHHHHHHcCCCcCccceEec
Confidence 3444554443222346779999999999988887775 3489999999 56999999999999885321235556
Q ss_pred CCCcC----CCCCCCcEEEEcCcCC
Q 030935 130 FLDAS----IFDLNPNIILGADVFY 150 (169)
Q Consensus 130 ~~~~~----~~~~~fDlIi~sd~iy 150 (169)
+.... ....+||+|+++.++-
T Consensus 284 DtL~~d~p~~~~~~fD~IvaNPPf~ 308 (542)
T 3lkd_A 284 DTLDEDWPTQEPTNFDGVLMNPPYS 308 (542)
T ss_dssp CTTTSCSCCSSCCCBSEEEECCCTT
T ss_pred ceecccccccccccccEEEecCCcC
Confidence 54332 2345899999987763
No 273
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.58 E-value=1.3e-07 Score=80.94 Aligned_cols=110 Identities=15% Similarity=0.067 Sum_probs=75.1
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh--------------------CCeEEEEcCCCcHHHHHHHHHHHHHh
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV--------------------GSNVTLTDDSNRIEVLKNMRRVCEMN 117 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~--------------------ga~V~~~D~~~~~~~l~~~~~n~~~n 117 (169)
++++|.+.....++.+|||.+||||.+.+.+++. ..+++++|++ +.+++.|+.|+..+
T Consensus 157 iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid--~~~~~lA~~nl~l~ 234 (541)
T 2ar0_A 157 LIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELV--PGTRRLALMNCLLH 234 (541)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESC--HHHHHHHHHHHHTT
T ss_pred HHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCC--HHHHHHHHHHHHHh
Confidence 4455554444456789999999999998887753 1379999999 57999999999988
Q ss_pred CCcce---EEEEEcCCCCcC--CCCCCCcEEEEcCcCCCCCC--------------hHHHHHHHHHhccCC
Q 030935 118 KLNCR---VMGLTWGFLDAS--IFDLNPNIILGADVFYDASG--------------KICAFEILICSLFPI 169 (169)
Q Consensus 118 ~~~~~---~~~l~~~~~~~~--~~~~~fDlIi~sd~iy~~~~--------------~~~l~~~l~~~L~p~ 169 (169)
++... -..+.+++.... ....+||+|+++.++-.... ...+++.+.+.|+|+
T Consensus 235 gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~g 305 (541)
T 2ar0_A 235 DIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPG 305 (541)
T ss_dssp TCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEE
T ss_pred CCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCC
Confidence 87520 011334543321 12358999999877643322 136888888888874
No 274
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.56 E-value=1.3e-07 Score=67.57 Aligned_cols=52 Identities=31% Similarity=0.370 Sum_probs=42.0
Q ss_pred cceeecchHHHHHHHHHhccCCCCCCeEEEECCCCC-HHHHHHHH-hCCeEEEEcCCCc
Q 030935 47 YGLFVWPCSVILAEYVWQQRYRFSGANVVELGAGTS-LPGLVAAK-VGSNVTLTDDSNR 103 (169)
Q Consensus 47 ~g~~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtG-l~~l~~a~-~ga~V~~~D~~~~ 103 (169)
.+.+.|. .|++|+.++.. .+.+|||+|||.| -++..+++ .|..|++||+++.
T Consensus 17 ~~~~m~e---~LaeYI~~~~~--~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~ 70 (153)
T 2k4m_A 17 RGSHMWN---DLAVYIIRCSG--PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPS 70 (153)
T ss_dssp CCCHHHH---HHHHHHHHHSC--SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCS
T ss_pred chhhHHH---HHHHHHHhcCC--CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCcc
Confidence 4555644 58999987642 3569999999999 59999997 8899999999974
No 275
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.43 E-value=3.7e-06 Score=63.22 Aligned_cols=90 Identities=18% Similarity=0.210 Sum_probs=62.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCeEEEEcCCCcHHHHHHHHHHHHHhCC--cceEEEEEcCCCCcC------------
Q 030935 70 SGANVVELGAGTSLPGLVAAKV-GSNVTLTDDSNRIEVLKNMRRVCEMNKL--NCRVMGLTWGFLDAS------------ 134 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~-ga~V~~~D~~~~~~~l~~~~~n~~~n~~--~~~~~~l~~~~~~~~------------ 134 (169)
+.++|||+|| |..++++|+. +.+|+.+|.+ ++..+.+++|++.++. ..++. +.+++..+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d--~~~~~~ar~~l~~~g~~~~~~I~-~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESD--RAWARMMKAWLAANPPAEGTEVN-IVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESC--HHHHHHHHHHHHHSCCCTTCEEE-EEECCCSSBCGGGCBSSSTTG
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCC--HHHHHHHHHHHHHcCCCCCCceE-EEEeCchhhhcccccccchhh
Confidence 4579999998 5788998886 6799999999 5799999999999887 43332 444542211
Q ss_pred ------------C-CCCCCcEEEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 135 ------------I-FDLNPNIILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 135 ------------~-~~~~fDlIi~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
. ...+||+|+- |-=+ ....+......|+||
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfI-Dg~k----~~~~~~~~l~~l~~G 147 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLV-DGRF----RVGCALATAFSITRP 147 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEE-CSSS----HHHHHHHHHHHCSSC
T ss_pred hhHHHHhhhhhccccCCCCCEEEE-eCCC----chhHHHHHHHhcCCC
Confidence 1 1258999996 3321 124444455788875
No 276
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.38 E-value=9.9e-07 Score=75.51 Aligned_cols=90 Identities=11% Similarity=0.036 Sum_probs=62.5
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-----------------CCeEEEEcCCCcHHHHHHHHHHHHHhCC
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-----------------GSNVTLTDDSNRIEVLKNMRRVCEMNKL 119 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-----------------ga~V~~~D~~~~~~~l~~~~~n~~~n~~ 119 (169)
.++++|.+.....++ +|||.+||||.+.+.+++. ..+++++|++ +.+++.|+.|+..+++
T Consensus 232 ~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid--~~~~~lA~~Nl~l~gi 308 (544)
T 3khk_A 232 SIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESN--PTTWKLAAMNMVIRGI 308 (544)
T ss_dssp HHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCC--HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCC--HHHHHHHHHHHHHhCC
Confidence 344555544333334 9999999999887776542 3479999999 6799999999999988
Q ss_pred cceEEEEEcCCCCcC--CCCCCCcEEEEcCcCC
Q 030935 120 NCRVMGLTWGFLDAS--IFDLNPNIILGADVFY 150 (169)
Q Consensus 120 ~~~~~~l~~~~~~~~--~~~~~fDlIi~sd~iy 150 (169)
...+ .+.+++.... ....+||+||++.++-
T Consensus 309 ~~~i-~i~~gDtL~~~~~~~~~fD~Iv~NPPf~ 340 (544)
T 3khk_A 309 DFNF-GKKNADSFLDDQHPDLRADFVMTNPPFN 340 (544)
T ss_dssp CCBC-CSSSCCTTTSCSCTTCCEEEEEECCCSS
T ss_pred Cccc-ceeccchhcCcccccccccEEEECCCcC
Confidence 6542 1245554322 2235899999987764
No 277
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.37 E-value=5.9e-07 Score=71.16 Aligned_cols=95 Identities=12% Similarity=-0.023 Sum_probs=57.9
Q ss_pred HHHHHHH-hccCCCCCCeEEEECCCC------CHHHHHHHH-hC--CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEE
Q 030935 57 ILAEYVW-QQRYRFSGANVVELGAGT------SLPGLVAAK-VG--SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGL 126 (169)
Q Consensus 57 ~La~~l~-~~~~~~~~~~vLElGcGt------Gl~~l~~a~-~g--a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l 126 (169)
.+++|+. ......++.+|||||||+ |. ..+++ .+ ++|+++|+++. + . .+.+.
T Consensus 49 ~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~---v---------~--~v~~~-- 110 (290)
T 2xyq_A 49 QLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF---V---------S--DADST-- 110 (290)
T ss_dssp HHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC---B---------C--SSSEE--
T ss_pred HHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC---C---------C--CCEEE--
Confidence 3666663 233445688999999955 65 33344 33 58999999973 1 1 23330
Q ss_pred EcCCCCcCCCCCCCcEEEEcCcCCC-----------CCChHHHHHHHHHhccCC
Q 030935 127 TWGFLDASIFDLNPNIILGADVFYD-----------ASGKICAFEILICSLFPI 169 (169)
Q Consensus 127 ~~~~~~~~~~~~~fDlIi~sd~iy~-----------~~~~~~l~~~l~~~L~p~ 169 (169)
..++........+||+|++...... ...++.+++.+.+.|+|+
T Consensus 111 i~gD~~~~~~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpG 164 (290)
T 2xyq_A 111 LIGDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALG 164 (290)
T ss_dssp EESCGGGCCCSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEE
T ss_pred EECccccCCccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCC
Confidence 2344433223468999998532111 122457899999999985
No 278
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.33 E-value=2.2e-06 Score=67.75 Aligned_cols=59 Identities=20% Similarity=0.085 Sum_probs=48.3
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhC
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNK 118 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~ 118 (169)
.|.+.+..... .+|..|||++||+|.+++.+++.|.+++++|++ +.+++.+++|++...
T Consensus 223 ~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~--~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 223 ELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGRRALGVELV--PRYAQLAKERFAREV 281 (297)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCC--HHHHHHHHHHHHHhc
Confidence 45555544332 467899999999999999999999999999999 579999999987653
No 279
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.31 E-value=8.5e-07 Score=77.57 Aligned_cols=95 Identities=12% Similarity=0.051 Sum_probs=60.0
Q ss_pred CCeEEEECCCCCHHHHHH---HH-hC---------C--eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCC
Q 030935 71 GANVVELGAGTSLPGLVA---AK-VG---------S--NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASI 135 (169)
Q Consensus 71 ~~~vLElGcGtGl~~l~~---a~-~g---------a--~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~ 135 (169)
++.|||+|||+|.++.++ ++ .+ . +|+++|.++ .++..++... .|+...++. +.-++.++-.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp--~A~~~l~~~~-~Ng~~d~Vt-VI~gd~eev~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNP--NAIVTLKYMN-VRTWKRRVT-IIESDMRSLP 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCH--HHHHHHHHHH-HHTTTTCSE-EEESCGGGHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCCh--HHHHHHHHHH-hcCCCCeEE-EEeCchhhcc
Confidence 468999999999997543 32 23 2 899999994 3554444433 377654433 3445544322
Q ss_pred C------CCCCcEEEEcCcCCC--CCChHHHHHHHHHhccCC
Q 030935 136 F------DLNPNIILGADVFYD--ASGKICAFEILICSLFPI 169 (169)
Q Consensus 136 ~------~~~fDlIi~sd~iy~--~~~~~~l~~~l~~~L~p~ 169 (169)
. +++.|+||+-=+=|. .+..+..+....+.|+|+
T Consensus 486 lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~ 527 (745)
T 3ua3_A 486 GIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPT 527 (745)
T ss_dssp HHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTT
T ss_pred cccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCC
Confidence 2 569999997433232 234556777778888885
No 280
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.25 E-value=4.7e-06 Score=74.02 Aligned_cols=78 Identities=10% Similarity=-0.067 Sum_probs=53.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC-----CeEEEEcCCCcHHHHHHH--HHHHHHhCCc--ceEEEEEcCCCCc--CCCCC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVG-----SNVTLTDDSNRIEVLKNM--RRVCEMNKLN--CRVMGLTWGFLDA--SIFDL 138 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~g-----a~V~~~D~~~~~~~l~~~--~~n~~~n~~~--~~~~~l~~~~~~~--~~~~~ 138 (169)
++.+|||.|||+|.+.+.+++.. .+++++|+++ .+++.| +.|+..|.+. .....+..++... .....
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp--~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~ 398 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIET--LFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFA 398 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCG--GGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCH--HHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccC
Confidence 57799999999999999888753 3799999995 488888 7777654331 1111233344332 11235
Q ss_pred CCcEEEEcCcC
Q 030935 139 NPNIILGADVF 149 (169)
Q Consensus 139 ~fDlIi~sd~i 149 (169)
+||+||++.+.
T Consensus 399 kFDVVIgNPPY 409 (878)
T 3s1s_A 399 NVSVVVMNPPY 409 (878)
T ss_dssp TEEEEEECCBC
T ss_pred CCCEEEECCCc
Confidence 89999998877
No 281
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.23 E-value=4.6e-06 Score=65.32 Aligned_cols=117 Identities=15% Similarity=-0.033 Sum_probs=71.3
Q ss_pred CcceeecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-CC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceE
Q 030935 46 EYGLFVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-GS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRV 123 (169)
Q Consensus 46 ~~g~~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~ 123 (169)
.+|...=.++..|.+...+ ....++.+|||||||+|..+..+++. ++ .|.+.|+..+ +....+.. ...+.+.
T Consensus 51 ~~~~YrSRaA~KL~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvD--l~~~pi~~-~~~g~~i-- 124 (277)
T 3evf_A 51 DTGVAVSRGTAKLRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRD--GHEKPMNV-QSLGWNI-- 124 (277)
T ss_dssp SSCBCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT--TCCCCCCC-CBTTGGG--
T ss_pred cCCCccccHHHHHHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEecc--Cccccccc-CcCCCCe--
Confidence 4588888899999999988 34456679999999999999988875 55 6888888742 21000000 0001111
Q ss_pred EEEEcCCCCcCCCCCCCcEEEEcCcCCCCCC--hH-----HHHHHHHHhccCC
Q 030935 124 MGLTWGFLDASIFDLNPNIILGADVFYDASG--KI-----CAFEILICSLFPI 169 (169)
Q Consensus 124 ~~l~~~~~~~~~~~~~fDlIi~sd~iy~~~~--~~-----~l~~~l~~~L~p~ 169 (169)
..+.-+.....+.+.+||+|+| |+--+... .+ .+++...+.|+|+
T Consensus 125 i~~~~~~dv~~l~~~~~DlVls-D~apnsG~~~~D~~rs~~LL~~a~~~LkpG 176 (277)
T 3evf_A 125 ITFKDKTDIHRLEPVKCDTLLC-DIGESSSSSVTEGERTVRVLDTVEKWLACG 176 (277)
T ss_dssp EEEECSCCTTTSCCCCCSEEEE-CCCCCCSCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeccceehhcCCCCccEEEe-cCccCcCchHHHHHHHHHHHHHHHHHhCCC
Confidence 1122111112334568999998 55444322 11 2456777888885
No 282
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.99 E-value=2.9e-05 Score=63.35 Aligned_cols=76 Identities=16% Similarity=-0.058 Sum_probs=49.4
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC-CCCCCCcEEEEc
Q 030935 68 RFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS-IFDLNPNIILGA 146 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~-~~~~~fDlIi~s 146 (169)
..+|.+||||||.+|..+..++++|++|+++|..+ |-..+. .+ . .+..+ .++.... ....+||+|+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~---l~~~l~----~~-~--~V~~~-~~d~~~~~~~~~~~D~vvs- 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP---MAQSLM----DT-G--QVTWL-REDGFKFRPTRSNISWMVC- 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC---CCHHHH----TT-T--CEEEE-CSCTTTCCCCSSCEEEEEE-
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh---cChhhc----cC-C--CeEEE-eCccccccCCCCCcCEEEE-
Confidence 34789999999999999999999999999999875 322211 11 1 22222 3333222 22358999998
Q ss_pred CcCCCCCCh
Q 030935 147 DVFYDASGK 155 (169)
Q Consensus 147 d~iy~~~~~ 155 (169)
|+.-++...
T Consensus 277 Dm~~~p~~~ 285 (375)
T 4auk_A 277 DMVEKPAKV 285 (375)
T ss_dssp CCSSCHHHH
T ss_pred cCCCChHHh
Confidence 554444333
No 283
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.99 E-value=1.7e-05 Score=61.52 Aligned_cols=61 Identities=20% Similarity=0.151 Sum_probs=48.2
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCC
Q 030935 56 VILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKL 119 (169)
Q Consensus 56 ~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~ 119 (169)
..|.+.+.+... .+|..|||.+||+|..++++++.|.+++++|++ +..++.+++|++.+++
T Consensus 199 ~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~--~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 199 RDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMN--AEYVNQANFVLNQLEI 259 (260)
T ss_dssp HHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCC--HHHHHHHHHHHHhccC
Confidence 445555554332 467899999999999999999999999999999 5699999999987654
No 284
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.91 E-value=2.5e-05 Score=60.69 Aligned_cols=99 Identities=17% Similarity=0.018 Sum_probs=60.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-------C-------CeEEEEcCCCc-HHHH-----------HHHHHHHHHhC-----
Q 030935 70 SGANVVELGAGTSLPGLVAAKV-------G-------SNVTLTDDSNR-IEVL-----------KNMRRVCEMNK----- 118 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~-------g-------a~V~~~D~~~~-~~~l-----------~~~~~n~~~n~----- 118 (169)
+..+|||+|+|+|+..+.+++. + .+++.+|..+. .+.+ +.++.+++...
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3458999999999998876543 2 27999998851 1233 34555554310
Q ss_pred -----Cc--ceEEEEEcCCCCcCCC--C----CCCcEEEEcCcCCC---CC-ChHHHHHHHHHhccCC
Q 030935 119 -----LN--CRVMGLTWGFLDASIF--D----LNPNIILGADVFYD---AS-GKICAFEILICSLFPI 169 (169)
Q Consensus 119 -----~~--~~~~~l~~~~~~~~~~--~----~~fDlIi~sd~iy~---~~-~~~~l~~~l~~~L~p~ 169 (169)
.. .....+.+++..+.+. + .+||+|+. |.+-- +. ..+.+++.+.+.|+|+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~ifl-D~fsp~~~p~lw~~~~l~~l~~~L~pG 206 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFL-DGFAPAKNPDMWTQNLFNAMARLARPG 206 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEE-CSSCTTTCGGGCCHHHHHHHHHHEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEE-CCCCcccChhhcCHHHHHHHHHHcCCC
Confidence 10 1123355666433211 1 27999997 65321 11 2467999999999985
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.88 E-value=7.8e-05 Score=58.47 Aligned_cols=55 Identities=24% Similarity=0.064 Sum_probs=46.0
Q ss_pred cceeecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHH-hCC-eEEEEcCCC
Q 030935 47 YGLFVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAK-VGS-NVTLTDDSN 102 (169)
Q Consensus 47 ~g~~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~-~ga-~V~~~D~~~ 102 (169)
.|...=.++..|.+...+. ...++.+|||||||.|..+..+++ .++ .|+++|+..
T Consensus 68 ~g~YrSRAAfKL~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~ 124 (282)
T 3gcz_A 68 NGIAVSRGSAKLRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGV 124 (282)
T ss_dssp SSBCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred CCCEecHHHHHHHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEecc
Confidence 3777888999999999876 455677999999999999999885 455 799999975
No 286
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.81 E-value=9e-05 Score=58.67 Aligned_cols=97 Identities=14% Similarity=0.038 Sum_probs=65.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC--CeEEEEcCCCcHHHHHHHHHHHHH-hCC---cceEEEEEcCCCCcCC--CCCCCc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVG--SNVTLTDDSNRIEVLKNMRRVCEM-NKL---NCRVMGLTWGFLDASI--FDLNPN 141 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~g--a~V~~~D~~~~~~~l~~~~~n~~~-n~~---~~~~~~l~~~~~~~~~--~~~~fD 141 (169)
..++||=||-|.|.+...+++.. .+|+++|++ +++++.+++-+.. +.. +.++. +..++....+ ...+||
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID--~~Vv~~a~~~lp~~~~~~~~dpRv~-v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEID--AGVVSFCRQYLPNHNAGSYDDPRFK-LVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESC--HHHHHHHHHHCHHHHTTGGGCTTEE-EEESCTTTTTSCSSCCEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCC--HHHHHHHHhcCccccccccCCCcEE-EEechHHHHHhhccccCC
Confidence 45799999999999999888853 489999999 6799999887532 221 12222 4444433322 235899
Q ss_pred EEEE--cCcCCCCC--ChHHHHHHHHHhccCC
Q 030935 142 IILG--ADVFYDAS--GKICAFEILICSLFPI 169 (169)
Q Consensus 142 lIi~--sd~iy~~~--~~~~l~~~l~~~L~p~ 169 (169)
+||. .|...... .-.++++.+++.|+|+
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~ 191 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPG 191 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCCC
Confidence 9994 33332222 1367899999999984
No 287
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.76 E-value=2.5e-05 Score=61.44 Aligned_cols=83 Identities=14% Similarity=0.024 Sum_probs=55.1
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCC--
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASI-- 135 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~-- 135 (169)
|.+.+.......++..+||.+||.|.-+..+++.+.+|+++|.+ +.+++.+++ ++. ..+.+..-++.++....
T Consensus 10 Ll~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~D--p~Ai~~A~~-L~~--~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 10 LYQEALDLLAVRPGGVYVDATLGGAGHARGILERGGRVIGLDQD--PEAVARAKG-LHL--PGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp THHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHH-TCC--TTEEEEESCGGGHHHHHHH
T ss_pred HHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCC--HHHHHHHHh-hcc--CCEEEEECCcchHHHHHHH
Confidence 33444444344567899999999999999999887799999999 679999988 643 23333322232221111
Q ss_pred -CCCCCcEEEE
Q 030935 136 -FDLNPNIILG 145 (169)
Q Consensus 136 -~~~~fDlIi~ 145 (169)
...++|.|++
T Consensus 85 ~g~~~vDgIL~ 95 (285)
T 1wg8_A 85 LGVERVDGILA 95 (285)
T ss_dssp TTCSCEEEEEE
T ss_pred cCCCCcCEEEe
Confidence 1137898885
No 288
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.75 E-value=0.00049 Score=54.33 Aligned_cols=117 Identities=13% Similarity=-0.047 Sum_probs=72.4
Q ss_pred CcceeecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-CC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceE
Q 030935 46 EYGLFVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-GS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRV 123 (169)
Q Consensus 46 ~~g~~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~ 123 (169)
.+|...=.++..|.+...+ ....++++||||||++|..+..+++. ++ .|+++|+... +....+. ....+.+ +
T Consensus 58 ~~g~yrSRaa~KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~--~~~~P~~-~~~~~~~--i 131 (300)
T 3eld_A 58 DVGISVSRGAAKIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIE--GHEKPIH-MQTLGWN--I 131 (300)
T ss_dssp SSCCCSSTTHHHHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT--TSCCCCC-CCBTTGG--G
T ss_pred cCCCccchHHHHHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccc--ccccccc-ccccCCc--e
Confidence 3477777889999999988 44557889999999999999999974 55 7999999742 1000000 0000111 1
Q ss_pred EEEEcCCCCcCCCCCCCcEEEEcCcCCCCCCh-------HHHHHHHHHhccCC
Q 030935 124 MGLTWGFLDASIFDLNPNIILGADVFYDASGK-------ICAFEILICSLFPI 169 (169)
Q Consensus 124 ~~l~~~~~~~~~~~~~fDlIi~sd~iy~~~~~-------~~l~~~l~~~L~p~ 169 (169)
..+.-+.....+.+.++|+|+| |+--+.... -.|+....+.|+|+
T Consensus 132 v~~~~~~di~~l~~~~~DlVls-D~APnsG~~~~D~~rs~~LL~~A~~~LkpG 183 (300)
T 3eld_A 132 VKFKDKSNVFTMPTEPSDTLLC-DIGESSSNPLVERDRTMKVLENFERWKHVN 183 (300)
T ss_dssp EEEECSCCTTTSCCCCCSEEEE-CCCCCCSSHHHHHHHHHHHHHHHHHHCCTT
T ss_pred EEeecCceeeecCCCCcCEEee-cCcCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 2222221111234568999998 655544332 24566677888875
No 289
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.73 E-value=7.3e-07 Score=70.21 Aligned_cols=93 Identities=8% Similarity=-0.090 Sum_probs=66.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC--CCCCCCcEEEEc
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS--IFDLNPNIILGA 146 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~--~~~~~fDlIi~s 146 (169)
+.+..+||+-+|||.+|+.+.+.+.+++++|.+ +..++.+++|++.. -++++...+.-..... ....+||+|+.
T Consensus 90 ~n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~--~~a~~~L~~Nl~~~-~~~~V~~~D~~~~L~~l~~~~~~fdLVfi- 165 (283)
T 2oo3_A 90 INLNSTLSYYPGSPYFAINQLRSQDRLYLCELH--PTEYNFLLKLPHFN-KKVYVNHTDGVSKLNALLPPPEKRGLIFI- 165 (283)
T ss_dssp HSSSSSCCEEECHHHHHHHHSCTTSEEEEECCS--HHHHHHHTTSCCTT-SCEEEECSCHHHHHHHHCSCTTSCEEEEE-
T ss_pred hcCCCceeEeCCcHHHHHHHcCCCCeEEEEeCC--HHHHHHHHHHhCcC-CcEEEEeCcHHHHHHHhcCCCCCccEEEE-
Confidence 356789999999999999999966799999999 56999999998752 2233322221110111 12247999997
Q ss_pred CcCCC-CCChHHHHHHHHHh
Q 030935 147 DVFYD-ASGKICAFEILICS 165 (169)
Q Consensus 147 d~iy~-~~~~~~l~~~l~~~ 165 (169)
|+-|. ...++.+++.|.+.
T Consensus 166 DPPYe~k~~~~~vl~~L~~~ 185 (283)
T 2oo3_A 166 DPSYERKEEYKEIPYAIKNA 185 (283)
T ss_dssp CCCCCSTTHHHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHh
Confidence 99998 46888888888764
No 290
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.72 E-value=9.8e-05 Score=60.37 Aligned_cols=84 Identities=10% Similarity=-0.054 Sum_probs=51.8
Q ss_pred CCeEEEECCCCCHHHHHHHH--------h----C-----CeEEEEcCCCcHHHHHHHHHHHHHh-------------CCc
Q 030935 71 GANVVELGAGTSLPGLVAAK--------V----G-----SNVTLTDDSNRIEVLKNMRRVCEMN-------------KLN 120 (169)
Q Consensus 71 ~~~vLElGcGtGl~~l~~a~--------~----g-----a~V~~~D~~~~~~~l~~~~~n~~~n-------------~~~ 120 (169)
.-+|+|||||+|-.++.++. . + .+|...|+..+ ....+=+++... +..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~N--DFn~lF~~L~~~~~~~~~~~~~~~~~~~ 130 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSN--DFNTLFQLLPPLVSNTCMEECLAADGNR 130 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTS--CHHHHHHHSCCBCCCC--CCC---CCCB
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCcc--chHHHHhhhhhhhhhcchhhhccccCCC
Confidence 45899999999988887622 1 1 27999999865 333222222211 011
Q ss_pred ceEEEEEcCCCCcC-CCCCCCcEEEEcCcCCCCCChH
Q 030935 121 CRVMGLTWGFLDAS-IFDLNPNIILGADVFYDASGKI 156 (169)
Q Consensus 121 ~~~~~l~~~~~~~~-~~~~~fDlIi~sd~iy~~~~~~ 156 (169)
..+....-+.+... +++.+||+|+++-++||....+
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p 167 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVP 167 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCC
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCc
Confidence 12333444554443 3456999999999999987433
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.63 E-value=0.00038 Score=59.30 Aligned_cols=90 Identities=11% Similarity=-0.052 Sum_probs=64.7
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh---------------CCeEEEEcCCCcHHHHHHHHHHHHHhCCc
Q 030935 56 VILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV---------------GSNVTLTDDSNRIEVLKNMRRVCEMNKLN 120 (169)
Q Consensus 56 ~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~---------------ga~V~~~D~~~~~~~l~~~~~n~~~n~~~ 120 (169)
..++++|.+......+.+|+|-.||||.+-+.+.+. ...+.+.|++ +.+...++.|+..++..
T Consensus 203 ~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~--~~~~~la~mNl~lhg~~ 280 (530)
T 3ufb_A 203 RPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAK--SLPYLLVQMNLLLHGLE 280 (530)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCS--HHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhcc--HHHHHHHHHHHHhcCCc
Confidence 345666666555567789999999999887766542 2369999999 56999999999999876
Q ss_pred ceEEEEEcCCCCcC-C----CCCCCcEEEEcCcC
Q 030935 121 CRVMGLTWGFLDAS-I----FDLNPNIILGADVF 149 (169)
Q Consensus 121 ~~~~~l~~~~~~~~-~----~~~~fDlIi~sd~i 149 (169)
.. .+.+++.... . ...+||+|+++.++
T Consensus 281 ~~--~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf 312 (530)
T 3ufb_A 281 YP--RIDPENSLRFPLREMGDKDRVDVILTNPPF 312 (530)
T ss_dssp CC--EEECSCTTCSCGGGCCGGGCBSEEEECCCS
T ss_pred cc--cccccccccCchhhhcccccceEEEecCCC
Confidence 32 2455554321 1 12389999998776
No 292
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.52 E-value=0.00044 Score=56.71 Aligned_cols=86 Identities=15% Similarity=0.065 Sum_probs=53.0
Q ss_pred CCeEEEECCCCCHHHHHHHHh--------------C-----CeEEEEcCCCc--HHH---HHHHHHHHHH-hCC--cceE
Q 030935 71 GANVVELGAGTSLPGLVAAKV--------------G-----SNVTLTDDSNR--IEV---LKNMRRVCEM-NKL--NCRV 123 (169)
Q Consensus 71 ~~~vLElGcGtGl~~l~~a~~--------------g-----a~V~~~D~~~~--~~~---l~~~~~n~~~-n~~--~~~~ 123 (169)
.-+|+||||++|-.++.+... + .+|+..|+..+ -.+ +....+.+.. ++. ...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 358999999999988877654 1 26899998753 011 2222222222 221 2233
Q ss_pred EEEEcCCCCcCC-CCCCCcEEEEcCcCCCCCChH
Q 030935 124 MGLTWGFLDASI-FDLNPNIILGADVFYDASGKI 156 (169)
Q Consensus 124 ~~l~~~~~~~~~-~~~~fDlIi~sd~iy~~~~~~ 156 (169)
....-|.+.... ++.++|+|+++-++||....+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p 166 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVP 166 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSC
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCc
Confidence 434445554444 446999999999999976654
No 293
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.42 E-value=0.00046 Score=54.30 Aligned_cols=96 Identities=14% Similarity=0.023 Sum_probs=63.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-------CCeEEEEcCCCc---------H---------------HHHHHHHHHHHHhC
Q 030935 70 SGANVVELGAGTSLPGLVAAKV-------GSNVTLTDDSNR---------I---------------EVLKNMRRVCEMNK 118 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~-------ga~V~~~D~~~~---------~---------------~~l~~~~~n~~~n~ 118 (169)
..++|||+|+..|..++.++.. +.+|+++|..+. + ..++.+++|++..+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 3459999999999999887652 458999996421 0 14677899999888
Q ss_pred Cc-ceEEEEEcCCCCc---CCCCCCCcEEEEcCcCCCC-CChHHHHHHHHHhccCC
Q 030935 119 LN-CRVMGLTWGFLDA---SIFDLNPNIILGADVFYDA-SGKICAFEILICSLFPI 169 (169)
Q Consensus 119 ~~-~~~~~l~~~~~~~---~~~~~~fDlIi~sd~iy~~-~~~~~l~~~l~~~L~p~ 169 (169)
+. .++ .+..|+..+ .....+||+|.- |. +. ......++.+...|+||
T Consensus 186 l~~~~I-~li~Gda~etL~~~~~~~~d~vfI-Da--D~y~~~~~~Le~~~p~L~pG 237 (282)
T 2wk1_A 186 LLDEQV-RFLPGWFKDTLPTAPIDTLAVLRM-DG--DLYESTWDTLTNLYPKVSVG 237 (282)
T ss_dssp CCSTTE-EEEESCHHHHSTTCCCCCEEEEEE-CC--CSHHHHHHHHHHHGGGEEEE
T ss_pred CCcCce-EEEEeCHHHHHhhCCCCCEEEEEE-cC--CccccHHHHHHHHHhhcCCC
Confidence 73 333 244554432 222358999885 44 11 22446788888888775
No 294
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.38 E-value=0.00016 Score=56.04 Aligned_cols=110 Identities=15% Similarity=-0.012 Sum_probs=66.4
Q ss_pred CcceeecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh--C----CeEEEEc--CCCcHHHHHHHHHHHHHh
Q 030935 46 EYGLFVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV--G----SNVTLTD--DSNRIEVLKNMRRVCEMN 117 (169)
Q Consensus 46 ~~g~~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~--g----a~V~~~D--~~~~~~~l~~~~~n~~~n 117 (169)
++|...=.++..|.+.-.+. -..++.+||||||+.|..+..+++. . ..|+++| +.+. ...
T Consensus 50 ~~g~yRSRAayKL~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~-----------~~~ 117 (269)
T 2px2_A 50 VGGHPVSRGTAKLRWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPM-----------LMQ 117 (269)
T ss_dssp CCSCCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCC-----------CCC
T ss_pred cCCCcccHHHHHHHHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCC-----------ccc
Confidence 45777778899999888775 4556889999999999999999986 2 2455555 2220 000
Q ss_pred CCcceEEEEEcC-CCCcCCCCCCCcEEEEcCcCCCCCCh--HH-----HHHHHHHhccCC
Q 030935 118 KLNCRVMGLTWG-FLDASIFDLNPNIILGADVFYDASGK--IC-----AFEILICSLFPI 169 (169)
Q Consensus 118 ~~~~~~~~l~~~-~~~~~~~~~~fDlIi~sd~iy~~~~~--~~-----l~~~l~~~L~p~ 169 (169)
...+.+..+..+ ++.. ..+.++|+|+| |.=-+.... +. .+....+.|+|+
T Consensus 118 ~~Gv~~i~~~~G~Df~~-~~~~~~DvVLS-DMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~g 175 (269)
T 2px2_A 118 SYGWNIVTMKSGVDVFY-KPSEISDTLLC-DIGESSPSAEIEEQRTLRILEMVSDWLSRG 175 (269)
T ss_dssp STTGGGEEEECSCCGGG-SCCCCCSEEEE-CCCCCCSCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCceEEEeeccCCccC-CCCCCCCEEEe-CCCCCCCccHHHHHHHHHHHHHHHHHhhcC
Confidence 011223334444 5433 33458999997 543343221 11 344455667764
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.33 E-value=0.0014 Score=51.81 Aligned_cols=57 Identities=18% Similarity=0.014 Sum_probs=46.8
Q ss_pred CCcceeecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHH-hCC-eEEEEcCCC
Q 030935 45 EEYGLFVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAK-VGS-NVTLTDDSN 102 (169)
Q Consensus 45 ~~~g~~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~-~ga-~V~~~D~~~ 102 (169)
..+|..+-.++..|.+...+. ...++.+||||||++|..+..++. .|+ +|+++|+..
T Consensus 70 ~~~g~y~SR~~~KL~ei~~~~-~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~ 128 (321)
T 3lkz_A 70 VTGGHPVSRGTAKLRWLVERR-FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGG 128 (321)
T ss_dssp CSSCCCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCS
T ss_pred CcCCCccchHHHHHHHHHHhc-CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCC
Confidence 356888888999999888774 455777999999999999997766 566 699999985
No 296
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.21 E-value=0.0018 Score=51.85 Aligned_cols=71 Identities=13% Similarity=-0.032 Sum_probs=51.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC--CCCCcEEEE
Q 030935 69 FSGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF--DLNPNIILG 145 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~--~~~fDlIi~ 145 (169)
..+.+++||.||+|.+++.+.+.|. .|.++|++ +.+++..+.|..... .++...... -..+|+|++
T Consensus 9 ~~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d--~~a~~t~~~N~~~~~---------~~Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 9 LTGLRFIDLFAGLGGFRLALESCGAECVYSNEWD--KYAQEVYEMNFGEKP---------EGDITQVNEKTIPDHDILCA 77 (327)
T ss_dssp TTTCEEEEETCTTTHHHHHHHHTTCEEEEEECCC--HHHHHHHHHHHSCCC---------BSCGGGSCGGGSCCCSEEEE
T ss_pred cCCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCC--HHHHHHHHHHcCCCC---------cCCHHHcCHhhCCCCCEEEE
Confidence 4567999999999999999999998 48889999 568888888864211 233222111 126899998
Q ss_pred cCcCC
Q 030935 146 ADVFY 150 (169)
Q Consensus 146 sd~iy 150 (169)
..++.
T Consensus 78 gpPCQ 82 (327)
T 2c7p_A 78 GFPCQ 82 (327)
T ss_dssp ECCCT
T ss_pred CCCCC
Confidence 87765
No 297
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.21 E-value=0.00095 Score=54.24 Aligned_cols=87 Identities=15% Similarity=0.111 Sum_probs=59.3
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCC--eEEEEcCCCcHHHHHHHHHHHHHhCCc-----ceEEE
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGS--NVTLTDDSNRIEVLKNMRRVCEMNKLN-----CRVMG 125 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga--~V~~~D~~~~~~~l~~~~~n~~~n~~~-----~~~~~ 125 (169)
.+|.+.+..+ ...+|.+|||++||.|.=+..++..+. .|++.|+++ .=++.+++|++..+.. ..+..
T Consensus 135 ~aS~l~~~~L----~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~--~R~~~l~~~l~r~~~~~~~~~~~v~v 208 (359)
T 4fzv_A 135 AASLLPVLAL----GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSP--SRIARLQKILHSYVPEEIRDGNQVRV 208 (359)
T ss_dssp GGGHHHHHHH----CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCH--HHHHHHHHHHHHHSCTTTTTSSSEEE
T ss_pred HHHHHHHHHh----CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCH--HHHHHHHHHHHHhhhhhhccCCceEE
Confidence 5666666555 234688999999999999998888765 799999994 5788889999877642 12222
Q ss_pred EEcCCCC-cCCCCCCCcEEEE
Q 030935 126 LTWGFLD-ASIFDLNPNIILG 145 (169)
Q Consensus 126 l~~~~~~-~~~~~~~fDlIi~ 145 (169)
..+.... ......+||.|+.
T Consensus 209 ~~~D~~~~~~~~~~~fD~VLl 229 (359)
T 4fzv_A 209 TSWDGRKWGELEGDTYDRVLV 229 (359)
T ss_dssp ECCCGGGHHHHSTTCEEEEEE
T ss_pred EeCchhhcchhccccCCEEEE
Confidence 2222111 1123458999995
No 298
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.18 E-value=0.0032 Score=48.37 Aligned_cols=100 Identities=14% Similarity=-0.010 Sum_probs=63.0
Q ss_pred cceeecchHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEE
Q 030935 47 YGLFVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVM 124 (169)
Q Consensus 47 ~g~~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~ 124 (169)
.|...-.++..|.+...+. ...++.+||||||++|-.+..++. .|+ +|+++|+-.. .-.+ - ...+..+ ....
T Consensus 56 ~g~yrSRa~~KL~ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~-ghe~-P-~~~~s~g--wn~v 129 (267)
T 3p8z_A 56 THHAVSRGSAKLQWFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGP-GHEE-P-VPMSTYG--WNIV 129 (267)
T ss_dssp SSCCSSTHHHHHHHHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCST-TSCC-C-CCCCCTT--TTSE
T ss_pred CCCccchHHHHHHHHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCC-CccC-c-chhhhcC--cCce
Confidence 4777777899999888877 456777999999999999997776 465 7999999852 0000 0 0000011 1123
Q ss_pred EEEcC-CCCcCCCCCCCcEEEEcCcCCCCCC
Q 030935 125 GLTWG-FLDASIFDLNPNIILGADVFYDASG 154 (169)
Q Consensus 125 ~l~~~-~~~~~~~~~~fDlIi~sd~iy~~~~ 154 (169)
.+..+ ++. ...+.++|.|+| |+=-....
T Consensus 130 ~fk~gvDv~-~~~~~~~Dtllc-DIgeSs~~ 158 (267)
T 3p8z_A 130 KLMSGKDVF-YLPPEKCDTLLC-DIGESSPS 158 (267)
T ss_dssp EEECSCCGG-GCCCCCCSEEEE-CCCCCCSC
T ss_pred EEEecccee-ecCCccccEEEE-ecCCCCCC
Confidence 34444 322 223468999998 55545544
No 299
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.18 E-value=0.00025 Score=57.66 Aligned_cols=83 Identities=13% Similarity=0.069 Sum_probs=54.4
Q ss_pred CeEEEECCCCCHHHHHHHHh------------C------CeEEEEcCCCcHHHHHHHHHHHHHhC--CcceEEEEEcCCC
Q 030935 72 ANVVELGAGTSLPGLVAAKV------------G------SNVTLTDDSNRIEVLKNMRRVCEMNK--LNCRVMGLTWGFL 131 (169)
Q Consensus 72 ~~vLElGcGtGl~~l~~a~~------------g------a~V~~~D~~~~~~~l~~~~~n~~~n~--~~~~~~~l~~~~~ 131 (169)
-+|+||||++|-.++.+... + .+|+..|+..+ ....+-+++.... ....+....-|.+
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~N--DFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGN--DFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTS--CHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCch--HHHHHHHhcchhcccCCCEEEEecchhh
Confidence 47999999999777655443 2 27999999876 6665555543210 0122333445665
Q ss_pred CcCC-CCCCCcEEEEcCcCCCCCChH
Q 030935 132 DASI-FDLNPNIILGADVFYDASGKI 156 (169)
Q Consensus 132 ~~~~-~~~~fDlIi~sd~iy~~~~~~ 156 (169)
...+ ++.++|+|+++-.+||....+
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p 156 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVP 156 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCC
T ss_pred hhccCCCCceEEEEehhhhhhcccCc
Confidence 4444 456999999999999876543
No 300
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.09 E-value=0.00059 Score=55.81 Aligned_cols=97 Identities=12% Similarity=0.032 Sum_probs=63.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-eEEEEcCCCcHHHHHHHHHHHHH-hC--Cc---ceEEEEEcCCCCcCC-----CC
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS-NVTLTDDSNRIEVLKNMRRVCEM-NK--LN---CRVMGLTWGFLDASI-----FD 137 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga-~V~~~D~~~~~~~l~~~~~n~~~-n~--~~---~~~~~l~~~~~~~~~-----~~ 137 (169)
+.++||=||-|.|.....+.+... +|+++|++ +++++.+++-+.. ++ .+ .....+..++..... ..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEID--p~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEID--QMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESC--HHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccC--HHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 467999999999999998888654 89999999 6799999876421 11 11 111224444432211 23
Q ss_pred CCCcEEEEcCcCCCC--C---------ChHHHHHHHHHhccCC
Q 030935 138 LNPNIILGADVFYDA--S---------GKICAFEILICSLFPI 169 (169)
Q Consensus 138 ~~fDlIi~sd~iy~~--~---------~~~~l~~~l~~~L~p~ 169 (169)
.+||+||. |+.-.. . ....+++.+++.|+|+
T Consensus 283 ~~yDvIIv-Dl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~ 324 (381)
T 3c6k_A 283 REFDYVIN-DLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQD 324 (381)
T ss_dssp CCEEEEEE-ECCSSCCCCC----CHHHHHHHHHHHHHHTEEEE
T ss_pred CceeEEEE-CCCCCcccCcccCcchHHHHHHHHHHHHHhcCCC
Confidence 48999995 543211 0 1256789999999884
No 301
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.72 E-value=0.004 Score=50.80 Aligned_cols=74 Identities=19% Similarity=0.136 Sum_probs=49.9
Q ss_pred CeEEEECCCCCHHHHHHHHhCCe-EEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-CC-----CCCCCcEEE
Q 030935 72 ANVVELGAGTSLPGLVAAKVGSN-VTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-SI-----FDLNPNIIL 144 (169)
Q Consensus 72 ~~vLElGcGtGl~~l~~a~~ga~-V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~~-----~~~~fDlIi 144 (169)
-+++||.||+|.+++.+.+.|.+ |.++|++ +.+++..+.|.. ...+...+..+... .+ ....+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d--~~a~~t~~~N~~----~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEID--QHAINTHAINFP----RSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSC--HHHHHHHHHHCT----TSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCC--HHHHHHHHHhCC----CCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 47999999999999999999995 7799999 457777776643 22222122221111 01 235899999
Q ss_pred EcCcCCC
Q 030935 145 GADVFYD 151 (169)
Q Consensus 145 ~sd~iy~ 151 (169)
+..++..
T Consensus 77 ggpPCQ~ 83 (376)
T 3g7u_A 77 GGPPCQG 83 (376)
T ss_dssp ECCCCCT
T ss_pred ecCCCCC
Confidence 9888653
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.64 E-value=0.0046 Score=50.06 Aligned_cols=43 Identities=12% Similarity=0.149 Sum_probs=36.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHHHHH
Q 030935 70 SGANVVELGAGTSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMRRVC 114 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~~n~ 114 (169)
++..|||+|.|.|.++..++.. +.+|++++++ ++++..+++..
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D--~~l~~~L~~~~ 102 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKR--SSLYKFLNAKF 102 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCC--HHHHHHHHHHT
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecC--HHHHHHHHHhc
Confidence 3578999999999999999986 4599999999 56888887765
No 303
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.45 E-value=0.013 Score=48.17 Aligned_cols=46 Identities=13% Similarity=0.055 Sum_probs=39.8
Q ss_pred CCCCeEEEECCCCCHHHHHHH-HhC---CeEEEEcCCCcHHHHHHHHHHHHH
Q 030935 69 FSGANVVELGAGTSLPGLVAA-KVG---SNVTLTDDSNRIEVLKNMRRVCEM 116 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a-~~g---a~V~~~D~~~~~~~l~~~~~n~~~ 116 (169)
.++..++|+||+.|..++.++ +.+ ++|++.|-+ |..++.+++|++.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~--p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPD--RINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCC--HHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCC--HHHHHHHHHHHHh
Confidence 366789999999999999887 443 489999999 6799999999998
No 304
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.27 E-value=0.0093 Score=47.25 Aligned_cols=98 Identities=14% Similarity=0.039 Sum_probs=54.1
Q ss_pred HHHHHHHHh-ccCCCCCCeEEEECCCCC---HHH-HHHHHh---CCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEE
Q 030935 56 VILAEYVWQ-QRYRFSGANVVELGAGTS---LPG-LVAAKV---GSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLT 127 (169)
Q Consensus 56 ~~La~~l~~-~~~~~~~~~vLElGcGtG---l~~-l~~a~~---ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~ 127 (169)
.-|++|+.. ..-...|.+|||||||+- .+| ..+.+. |+.|+++|+.+- .. ... + ..
T Consensus 94 tqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~---~s---------da~--~--~I 157 (344)
T 3r24_A 94 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF---VS---------DAD--S--TL 157 (344)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC---BC---------SSS--E--EE
T ss_pred HHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccc---cc---------CCC--e--EE
Confidence 356777743 223346889999998421 122 333333 458999999973 10 111 1 13
Q ss_pred cCCCCcCCCCCCCcEEEEcCcCCCC-----------CChHHHHHHHHHhccCC
Q 030935 128 WGFLDASIFDLNPNIILGADVFYDA-----------SGKICAFEILICSLFPI 169 (169)
Q Consensus 128 ~~~~~~~~~~~~fDlIi~sd~iy~~-----------~~~~~l~~~l~~~L~p~ 169 (169)
.|+........+||+||+-..--.. ...+.++....+.|+||
T Consensus 158 qGD~~~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpG 210 (344)
T 3r24_A 158 IGDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALG 210 (344)
T ss_dssp ESCGGGEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEE
T ss_pred EccccccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCC
Confidence 3443322234689999963322211 12456666677788874
No 305
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.18 E-value=0.0012 Score=65.29 Aligned_cols=93 Identities=15% Similarity=0.045 Sum_probs=42.2
Q ss_pred CCeEEEECCCCCHHHHHHHH-hC------CeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-CCCCCCCcE
Q 030935 71 GANVVELGAGTSLPGLVAAK-VG------SNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-SIFDLNPNI 142 (169)
Q Consensus 71 ~~~vLElGcGtGl~~l~~a~-~g------a~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~~~~~~fDl 142 (169)
..+|||+|+|+|.....+.+ .+ .+.+.||++.. ..+.+++.++.. .+..-.|..... ......||+
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~--~~~~a~~~f~~~----di~~~~~d~~~~~~~~~~~ydl 1314 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQ--ALEAAQAKLEQL----HVTQGQWDPANPAPGSLGKADL 1314 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSS--STTTTTTTHHHH----TEEEECCCSSCCCC-----CCE
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChH--HHHHHHHHhhhc----ccccccccccccccCCCCceeE
Confidence 45899999999965433222 22 26899999964 776776665432 122222322111 113347999
Q ss_pred EEEcCcCCCCCChHHHHHHHHHhccCC
Q 030935 143 ILGADVFYDASGKICAFEILICSLFPI 169 (169)
Q Consensus 143 Ii~sd~iy~~~~~~~l~~~l~~~L~p~ 169 (169)
||++.+++...+....++.+...|+|+
T Consensus 1315 via~~vl~~t~~~~~~l~~~~~lL~p~ 1341 (2512)
T 2vz8_A 1315 LVCNCALATLGDPAVAVGNMAATLKEG 1341 (2512)
T ss_dssp EEEECC--------------------C
T ss_pred EEEcccccccccHHHHHHHHHHhcCCC
Confidence 999999998889999999999999986
No 306
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.06 E-value=0.0085 Score=47.67 Aligned_cols=61 Identities=18% Similarity=0.118 Sum_probs=47.7
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCC
Q 030935 56 VILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKL 119 (169)
Q Consensus 56 ~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~ 119 (169)
..|.+.+.+.. ..+|..|||-.||+|..++++.+.|.+.+++|++ +..++.++++++..+.
T Consensus 239 ~~l~~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~--~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 239 AKLPEFFIRML-TEPDDLVVDIFGGSNTTGLVAERESRKWISFEMK--PEYVAASAFRFLDNNI 299 (323)
T ss_dssp THHHHHHHHHH-CCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESC--HHHHHHHHGGGSCSCS
T ss_pred HHHHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCC--HHHHHHHHHHHHhccc
Confidence 34555554432 2367899999999999999999999999999999 5688888888765543
No 307
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.93 E-value=0.016 Score=46.16 Aligned_cols=64 Identities=19% Similarity=0.192 Sum_probs=47.1
Q ss_pred hHHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCc-HHHHHHHHHHHHHhC
Q 030935 54 CSVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNR-IEVLKNMRRVCEMNK 118 (169)
Q Consensus 54 ~~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~-~~~l~~~~~n~~~n~ 118 (169)
-...|.+.+.+.. ..+|..|||--||+|..++++.+.|.+.+++|+++. ...++.++++++..+
T Consensus 227 kp~~l~~~~i~~~-~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 227 KPAAVIERLVRAL-SHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CCHHHHHHHHHHH-SCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCHHHHHHHHHHh-CCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 3455666665543 236789999999999999999999999999999950 048888888876543
No 308
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.91 E-value=0.014 Score=46.90 Aligned_cols=70 Identities=14% Similarity=-0.004 Sum_probs=48.3
Q ss_pred CeEEEECCCCCHHHHHHHHhC--C-eEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCC----CCCCCcEEE
Q 030935 72 ANVVELGAGTSLPGLVAAKVG--S-NVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASI----FDLNPNIIL 144 (169)
Q Consensus 72 ~~vLElGcGtGl~~l~~a~~g--a-~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~----~~~~fDlIi 144 (169)
.+|+||.||+|.+++.+.+.| + .|.++|++ +.+++..+.|.... . +..++..... ....+|+|+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d--~~a~~~~~~N~~~~----~---~~~~Di~~~~~~~~~~~~~D~l~ 73 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVN--TVANEVYKYNFPHT----Q---LLAKTIEGITLEEFDRLSFDMIL 73 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCC--HHHHHHHHHHCTTS----C---EECSCGGGCCHHHHHHHCCSEEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCC--HHHHHHHHHhcccc----c---cccCCHHHccHhHcCcCCcCEEE
Confidence 479999999999999999998 4 59999999 45888888876421 1 1223332211 112689999
Q ss_pred EcCcCC
Q 030935 145 GADVFY 150 (169)
Q Consensus 145 ~sd~iy 150 (169)
+..+..
T Consensus 74 ~gpPCq 79 (343)
T 1g55_A 74 MSPPCQ 79 (343)
T ss_dssp ECCC--
T ss_pred EcCCCc
Confidence 987753
No 309
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.53 E-value=0.007 Score=48.44 Aligned_cols=71 Identities=18% Similarity=-0.002 Sum_probs=48.6
Q ss_pred CeEEEECCCCCHHHHHHHHhCC--e-E-EEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC----CCCCCCcEE
Q 030935 72 ANVVELGAGTSLPGLVAAKVGS--N-V-TLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS----IFDLNPNII 143 (169)
Q Consensus 72 ~~vLElGcGtGl~~l~~a~~ga--~-V-~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~----~~~~~fDlI 143 (169)
-+++||.||.|.+++.+.+.|. + | .++|++ +.+.+..+.|.... ...++.... +....+|++
T Consensus 11 ~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d--~~a~~ty~~N~~~~--------~~~~DI~~~~~~~i~~~~~Dil 80 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERSSININATFIPFDIN--EIANKIYSKNFKEE--------VQVKNLDSISIKQIESLNCNTW 80 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCC--HHHHHHHHHHHCCC--------CBCCCTTTCCHHHHHHTCCCEE
T ss_pred CEEEEECCChhHHHHHHHHcCCCceEEEEEEECC--HHHHHHHHHHCCCC--------cccCChhhcCHHHhccCCCCEE
Confidence 4899999999999999999883 4 5 699999 45777777776322 112232211 111268999
Q ss_pred EEcCcCCCC
Q 030935 144 LGADVFYDA 152 (169)
Q Consensus 144 i~sd~iy~~ 152 (169)
+++-+...-
T Consensus 81 ~ggpPCQ~f 89 (327)
T 3qv2_A 81 FMSPPCQPY 89 (327)
T ss_dssp EECCCCTTC
T ss_pred EecCCccCc
Confidence 988876533
No 310
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.40 E-value=0.039 Score=43.47 Aligned_cols=68 Identities=16% Similarity=0.092 Sum_probs=47.3
Q ss_pred eEEEECCCCCHHHHHHHHhCCe-EEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCC--CCCCcEEEEcCcC
Q 030935 73 NVVELGAGTSLPGLVAAKVGSN-VTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIF--DLNPNIILGADVF 149 (169)
Q Consensus 73 ~vLElGcGtGl~~l~~a~~ga~-V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~--~~~fDlIi~sd~i 149 (169)
+||||-||.|.+++.+.+.|.+ |.++|+++. +.+.-+.|.. .. +..++...-.. -.++|++++.-++
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~--a~~ty~~N~~-----~~---~~~~DI~~i~~~~~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKS--IWKTYESNHS-----AK---LIKGDISKISSDEFPKCDGIIGGPPS 71 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTT--THHHHHHHCC-----SE---EEESCGGGCCGGGSCCCSEEECCCCG
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHH--HHHHHHHHCC-----CC---cccCChhhCCHhhCCcccEEEecCCC
Confidence 6999999999999999999985 779999964 6666665532 12 22344322111 1378999988877
Q ss_pred C
Q 030935 150 Y 150 (169)
Q Consensus 150 y 150 (169)
.
T Consensus 72 Q 72 (331)
T 3ubt_Y 72 Q 72 (331)
T ss_dssp G
T ss_pred C
Confidence 5
No 311
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.37 E-value=0.03 Score=44.13 Aligned_cols=72 Identities=13% Similarity=0.038 Sum_probs=47.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCe---EEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC----CC-CCCCc
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGSN---VTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS----IF-DLNPN 141 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga~---V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~----~~-~~~fD 141 (169)
...+++||-||.|.+++.+.+.|.+ |.++|+++ .+.+..+.|.. ...+. .++.... +. ...+|
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~--~a~~ty~~N~~----~~~~~---~~DI~~i~~~~i~~~~~~D 85 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCE--DSITVGMVRHQ----GKIMY---VGDVRSVTQKHIQEWGPFD 85 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCH--HHHHHHHHHTT----TCEEE---ECCGGGCCHHHHHHTCCCS
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCH--HHHHHHHHhCC----CCcee---CCChHHccHHHhcccCCcC
Confidence 3458999999999999999999974 58999994 46666565532 21122 2333221 11 13689
Q ss_pred EEEEcCcCC
Q 030935 142 IILGADVFY 150 (169)
Q Consensus 142 lIi~sd~iy 150 (169)
+|+++-+..
T Consensus 86 ll~ggpPCQ 94 (295)
T 2qrv_A 86 LVIGGSPCN 94 (295)
T ss_dssp EEEECCCCG
T ss_pred EEEecCCCc
Confidence 999887664
No 312
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.28 E-value=0.088 Score=43.05 Aligned_cols=58 Identities=14% Similarity=0.111 Sum_probs=36.1
Q ss_pred HHHHHHHHHhc---cCCCCCCeEEEECCCCCHHHHHHHHh--------CC-eEEEEcCCCcHHHHHHHHHHH
Q 030935 55 SVILAEYVWQQ---RYRFSGANVVELGAGTSLPGLVAAKV--------GS-NVTLTDDSNRIEVLKNMRRVC 114 (169)
Q Consensus 55 ~~~La~~l~~~---~~~~~~~~vLElGcGtGl~~l~~a~~--------ga-~V~~~D~~~~~~~l~~~~~n~ 114 (169)
+..++.|+.+. ......-.|+|+|+|.|.+..-+.+. .. ++..+|.|+ .+.+.-++++
T Consensus 62 Ge~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp--~Lr~~Q~~~L 131 (387)
T 1zkd_A 62 GELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINP--VLRQKQQTLL 131 (387)
T ss_dssp HHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCH--HHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCH--HHHHHHHHHh
Confidence 56677776542 22222347999999999887644331 22 799999994 4555444433
No 313
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.18 E-value=0.025 Score=45.33 Aligned_cols=72 Identities=15% Similarity=0.063 Sum_probs=46.8
Q ss_pred eEEEECCCCCHHHHHHHHhCC--e-EEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-CCCCCCCcEEEEcCc
Q 030935 73 NVVELGAGTSLPGLVAAKVGS--N-VTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA-SIFDLNPNIILGADV 148 (169)
Q Consensus 73 ~vLElGcGtGl~~l~~a~~ga--~-V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~-~~~~~~fDlIi~sd~ 148 (169)
+++||.||.|.+++.+.+.|. + |.++|+++ .+.+..+.|.. ...+..-+..+... .+....+|+++++-+
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~--~a~~ty~~N~~----~~~~~~~DI~~~~~~~~~~~~~D~l~ggpP 78 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINT--VANSVYKHNFP----ETNLLNRNIQQLTPQVIKKWNVDTILMSPP 78 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCH--HHHHHHHHHCT----TSCEECCCGGGCCHHHHHHTTCCEEEECCC
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCH--HHHHHHHHhCC----CCceeccccccCCHHHhccCCCCEEEecCC
Confidence 799999999999999999885 4 78999994 46666666543 22222112222111 111126899998877
Q ss_pred CC
Q 030935 149 FY 150 (169)
Q Consensus 149 iy 150 (169)
..
T Consensus 79 CQ 80 (333)
T 4h0n_A 79 CQ 80 (333)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 314
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.39 E-value=0.17 Score=39.88 Aligned_cols=57 Identities=21% Similarity=0.163 Sum_probs=39.4
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCC-CHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGT-SLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGt-Gl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
+.+...+.+.+......+|.+||=.|||. |+..+.+++ .|++|+++|.++ +-++.++
T Consensus 149 ~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~--~~~~~~~ 207 (340)
T 3s2e_A 149 LCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDD--AKLNLAR 207 (340)
T ss_dssp GTHHHHHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCH--HHHHHHH
T ss_pred cchhHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCH--HHHHHHH
Confidence 34444455555555566888999999974 777776666 588999999984 4555544
No 315
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.10 E-value=0.12 Score=41.81 Aligned_cols=48 Identities=25% Similarity=0.232 Sum_probs=33.6
Q ss_pred HHhccCCCCCCeEEEECCCC-CHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 62 VWQQRYRFSGANVVELGAGT-SLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 62 l~~~~~~~~~~~vLElGcGt-Gl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
........+|.+||-+|||. |+..+.+|+ .|+ +|+++|.++ +-++.++
T Consensus 177 al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~--~~~~~a~ 227 (398)
T 2dph_A 177 GCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNP--ERLKLLS 227 (398)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCH--HHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCH--HHHHHHH
Confidence 33334456789999999874 666666666 688 899999984 4555543
No 316
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.98 E-value=0.24 Score=39.60 Aligned_cols=72 Identities=19% Similarity=0.221 Sum_probs=42.7
Q ss_pred EEEeccccCCcceeecchHHHHHHHHH-hccCCCCCCeEEEECCCC-CHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 37 IAIIENMKEEYGLFVWPCSVILAEYVW-QQRYRFSGANVVELGAGT-SLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 37 i~i~~~~~~~~g~~~W~~~~~La~~l~-~~~~~~~~~~vLElGcGt-Gl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
+++.++.....+. ..+.+...+.+.. +.....+|.+||-+|||. |+..+.+|+ .|+ +|+++|.++ +-++.++
T Consensus 157 ~~iP~~~~~~~aa-~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~--~~~~~a~ 232 (371)
T 1f8f_A 157 VKVTKDVPIELLG-PLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVE--SRLELAK 232 (371)
T ss_dssp EEECTTSCGGGTG-GGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCH--HHHHHHH
T ss_pred EECCCCCCHHHHH-HhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCH--HHHHHHH
Confidence 4444444333222 2333444444433 444556789999999874 666666665 688 699999884 4555554
No 317
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=93.59 E-value=0.17 Score=41.95 Aligned_cols=59 Identities=24% Similarity=0.178 Sum_probs=38.2
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCCCCHHHHHHHH----hC---CeEEEEcCCCcHHHHHHHHHHHH
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAGTSLPGLVAAK----VG---SNVTLTDDSNRIEVLKNMRRVCE 115 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~----~g---a~V~~~D~~~~~~~l~~~~~n~~ 115 (169)
+..++.|+.+.-......+|+|+|+|+|.+..-+.+ .+ .++..+|.|+. +-+.-++++.
T Consensus 122 Ge~la~~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~--Lr~~Q~~~L~ 187 (432)
T 4f3n_A 122 AQTLARPVAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGE--LRARQRETLG 187 (432)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSS--SHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHH--HHHHHHHHHh
Confidence 456777765432211235899999999988764433 22 27999999964 5555555554
No 318
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=93.51 E-value=0.099 Score=42.06 Aligned_cols=52 Identities=8% Similarity=-0.022 Sum_probs=39.9
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHHHHHh-C--CeEEEEcCCCcHHHHHHHH
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLVAAKV-G--SNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~~a~~-g--a~V~~~D~~~~~~~l~~~~ 111 (169)
|.+-+.......+|..++|..||.|.-+..+++. + .+|++.|.+ +.+++.++
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~D--p~Al~~A~ 99 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRD--PQAIAVAK 99 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESC--HHHHHHHT
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECC--HHHHHHHH
Confidence 3333444444557889999999999999988875 3 389999999 56898874
No 319
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=93.44 E-value=0.62 Score=37.60 Aligned_cols=109 Identities=17% Similarity=0.050 Sum_probs=67.5
Q ss_pred CcceeecchHHHHHHHHHhccCC-CCCCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcce-E
Q 030935 46 EYGLFVWPCSVILAEYVWQQRYR-FSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCR-V 123 (169)
Q Consensus 46 ~~g~~~W~~~~~La~~l~~~~~~-~~~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~-~ 123 (169)
.-..+-|+++- +|++++... ..+.+||-++.+.|.+++.++..+. ...+| | .-....++.|++.|++... +
T Consensus 16 ~~~l~a~da~d---~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~~~-~~~~d-s--~~~~~~~~~n~~~~~~~~~~~ 88 (375)
T 4dcm_A 16 VNPLQAWEAAD---EYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKP-YSIGD-S--YISELATRENLRLNGIDESSV 88 (375)
T ss_dssp SCSCCSCCHHH---HHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGGCC-EEEES-C--HHHHHHHHHHHHHTTCCGGGS
T ss_pred CCCCCccchHH---HHHHHhhhhccCCCCEEEECCCCCHHHHhhccCCc-eEEEh-H--HHHHHHHHHHHHHcCCCccce
Confidence 45678899864 455554322 2456899999999999998876543 23345 3 2344578899999998642 3
Q ss_pred EEEEcCCCCcCCCCCCCcEEEEcCcCCCCCChHH---HHHHHHHhccCC
Q 030935 124 MGLTWGFLDASIFDLNPNIILGADVFYDASGKIC---AFEILICSLFPI 169 (169)
Q Consensus 124 ~~l~~~~~~~~~~~~~fDlIi~sd~iy~~~~~~~---l~~~l~~~L~p~ 169 (169)
..+...+ .....||+|+- |.+..... .+..+...|+|+
T Consensus 89 ~~~~~~~----~~~~~~~~v~~----~lpk~~~~l~~~L~~l~~~l~~~ 129 (375)
T 4dcm_A 89 KFLDSTA----DYPQQPGVVLI----KVPKTLALLEQQLRALRKVVTSD 129 (375)
T ss_dssp EEEETTS----CCCSSCSEEEE----ECCSCHHHHHHHHHHHHTTCCTT
T ss_pred Eeccccc----ccccCCCEEEE----EcCCCHHHHHHHHHHHHhhCCCC
Confidence 3333322 12347899885 55555444 455555555553
No 320
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.06 E-value=0.23 Score=39.28 Aligned_cols=57 Identities=16% Similarity=0.113 Sum_probs=36.5
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEECCCC-CHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELGAGT-SLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElGcGt-Gl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
+.+...+.+........+|.+||=+|+|. |+..+.+|+ .|++|++++.++. -++.++
T Consensus 159 ~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~--~~~~~~ 217 (348)
T 3two_A 159 LCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEH--KKQDAL 217 (348)
T ss_dssp GTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSST--THHHHH
T ss_pred hhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHH--HHHHHH
Confidence 33444444444444566889999999863 555555555 5889999998863 444443
No 321
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.68 E-value=0.48 Score=37.92 Aligned_cols=72 Identities=17% Similarity=0.121 Sum_probs=42.2
Q ss_pred EEEeccccCCcceeecchHHHHHHHHHhccCCCCCCeEEEECCCC-CHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHHH
Q 030935 37 IAIIENMKEEYGLFVWPCSVILAEYVWQQRYRFSGANVVELGAGT-SLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMRR 112 (169)
Q Consensus 37 i~i~~~~~~~~g~~~W~~~~~La~~l~~~~~~~~~~~vLElGcGt-Gl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~~ 112 (169)
+++.++.....+. .......+.+........+|.+||=.|+|. |+.++.+|+ .|+ +|+++|.++ +-++.+++
T Consensus 151 ~~~P~~~~~~~aa--l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~--~~~~~a~~ 225 (370)
T 4ej6_A 151 FEIPLTLDPVHGA--FCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQA--TKRRLAEE 225 (370)
T ss_dssp EEECTTSCTTGGG--GHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCH--HHHHHHHH
T ss_pred EECCCCCCHHHHh--hhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH--HHHHHHHH
Confidence 4444444444443 333333444444444556788999999862 555555555 588 899999984 45555443
No 322
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.23 E-value=0.42 Score=38.51 Aligned_cols=48 Identities=23% Similarity=0.209 Sum_probs=32.7
Q ss_pred HHhccCCCCCCeEEEECCCC-CHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 62 VWQQRYRFSGANVVELGAGT-SLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 62 l~~~~~~~~~~~vLElGcGt-Gl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
........+|.+||=+|||. |+.++.+|+ +|+ +|+++|.++ +-++.++
T Consensus 177 al~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~--~~~~~a~ 227 (398)
T 1kol_A 177 GAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNP--ARLAHAK 227 (398)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCH--HHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCH--HHHHHHH
Confidence 33334455788999999863 666666666 588 799999984 4555554
No 323
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.20 E-value=0.47 Score=37.85 Aligned_cols=71 Identities=13% Similarity=0.140 Sum_probs=41.6
Q ss_pred EEEeccccCCcceeecchHHHHHHHHH-hccCCCCCCeEEEECCC-CCHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 37 IAIIENMKEEYGLFVWPCSVILAEYVW-QQRYRFSGANVVELGAG-TSLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 37 i~i~~~~~~~~g~~~W~~~~~La~~l~-~~~~~~~~~~vLElGcG-tGl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
+++.++.... + ...+.+...+.... +.....+|.+||=+|+| .|+..+.+|+ .|+ +|+++|.++. -++.++
T Consensus 159 ~~iP~~l~~~-a-a~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~--~~~~a~ 233 (373)
T 1p0f_A 159 AKIDPKAPLE-S-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKD--KFPKAI 233 (373)
T ss_dssp EEECTTCCGG-G-GGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGG--GHHHHH
T ss_pred EECCCCCChh-h-hhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHH--HHHHHH
Confidence 4555554444 3 33344444444333 34455678899999976 3555555555 588 8999998853 444443
No 324
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=92.14 E-value=0.58 Score=35.81 Aligned_cols=79 Identities=10% Similarity=-0.036 Sum_probs=52.7
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------C
Q 030935 69 FSGANVVELGAGTSL---PGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------D 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl---~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------~ 137 (169)
++||.+|==|++.|+ ++..+++.|++|+++|.+ ++-++.+.+.++..+.++.....+..+... ... -
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~--~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL--EDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 589999999988875 334556679999999998 457777777777777665544444443211 000 1
Q ss_pred CCCcEEEEcCcC
Q 030935 138 LNPNIILGADVF 149 (169)
Q Consensus 138 ~~fDlIi~sd~i 149 (169)
.+.|+++.+-=+
T Consensus 83 G~iDiLVNNAGi 94 (254)
T 4fn4_A 83 SRIDVLCNNAGI 94 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 378999976543
No 325
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.96 E-value=0.34 Score=38.81 Aligned_cols=52 Identities=17% Similarity=0.144 Sum_probs=33.8
Q ss_pred HHHHHHhccCCCCCCeEEEECCCC-CHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGT-SLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGt-Gl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
.+.+........+|.+||-+|+|. |+..+.+|+ .|++|++++.++. -++.++
T Consensus 182 tA~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~--~~~~a~ 235 (369)
T 1uuf_A 182 TTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEA--KREAAK 235 (369)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGG--GHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHH
Confidence 333444334455788999999863 555555555 5889999998853 455544
No 326
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=91.80 E-value=0.65 Score=35.18 Aligned_cols=101 Identities=17% Similarity=0.109 Sum_probs=51.3
Q ss_pred eecchHHHHHHHHHhccCCCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEE
Q 030935 50 FVWPCSVILAEYVWQQRYRFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGL 126 (169)
Q Consensus 50 ~~W~~~~~La~~l~~~~~~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l 126 (169)
++|-+.-.-.-|+..+.-.+++++||=.|++.|+- ...+++.|++|++++.+. ++..+.+++.++..+..+.+...
T Consensus 8 ~~~~~~~~~~~~~~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~ 86 (271)
T 4iin_A 8 SSGVDLGTENLYFQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSN-AEVADALKNELEEKGYKAAVIKF 86 (271)
T ss_dssp ----------------CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ccccccCcceehhhhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHHHhcCCceEEEEC
Confidence 34444322233444444456888999888776642 234455689999999854 45666666666666655554444
Q ss_pred EcCCCCc--CCC------CCCCcEEEEcCcCCC
Q 030935 127 TWGFLDA--SIF------DLNPNIILGADVFYD 151 (169)
Q Consensus 127 ~~~~~~~--~~~------~~~fDlIi~sd~iy~ 151 (169)
+..+... ... ..++|++|.+--+..
T Consensus 87 D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 119 (271)
T 4iin_A 87 DAASESDFIEAIQTIVQSDGGLSYLVNNAGVVR 119 (271)
T ss_dssp CTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCC
Confidence 4333211 000 137899997665543
No 327
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.50 E-value=0.46 Score=37.79 Aligned_cols=55 Identities=16% Similarity=0.121 Sum_probs=34.9
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCC-CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAG-TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcG-tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
+...+.+.+......+|.+||-+|+| .|+..+.+++ .|++|++++.++. -++.++
T Consensus 164 ~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~--~~~~~~ 220 (360)
T 1piw_A 164 GGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSR--KREDAM 220 (360)
T ss_dssp HHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSST--THHHHH
T ss_pred hHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH--HHHHHH
Confidence 33333444444455678999999985 3455555554 6889999998753 444444
No 328
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.37 E-value=0.53 Score=37.23 Aligned_cols=55 Identities=13% Similarity=0.086 Sum_probs=35.2
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCCC-CHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHHH
Q 030935 56 VILAEYVWQQRYRFSGANVVELGAGT-SLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMRR 112 (169)
Q Consensus 56 ~~La~~l~~~~~~~~~~~vLElGcGt-Gl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~~ 112 (169)
...+.+..+.....+|.+||=+|+|. |+..+.+|+ .|+ +|+++|.++ +-++.+++
T Consensus 152 ~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~--~~~~~~~~ 209 (352)
T 3fpc_A 152 MTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRK--HCCDIALE 209 (352)
T ss_dssp HHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCH--HHHHHHHH
T ss_pred hHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCH--HHHHHHHH
Confidence 33344444445566788999999762 555555555 587 799999984 34555443
No 329
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.34 E-value=0.51 Score=37.43 Aligned_cols=46 Identities=30% Similarity=0.383 Sum_probs=31.5
Q ss_pred hccCCCCCCeEEEECCCC-CHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 64 QQRYRFSGANVVELGAGT-SLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 64 ~~~~~~~~~~vLElGcGt-Gl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
+.....+|.+||-+|+|. |+..+.+|+ .|+ +|+++|.++ +-++.++
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~--~~~~~a~ 213 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSA--TRLSKAK 213 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCH--HHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH--HHHHHHH
Confidence 333456788999999863 555565565 588 899999884 3445443
No 330
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.25 E-value=0.5 Score=36.71 Aligned_cols=57 Identities=16% Similarity=0.121 Sum_probs=37.0
Q ss_pred cchHHHHHHHHHhccCCCCCCeEEEECCC-CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 52 WPCSVILAEYVWQQRYRFSGANVVELGAG-TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 52 W~~~~~La~~l~~~~~~~~~~~vLElGcG-tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
.+.+...|.+.+......+|.+||=+|+| .|+..+.+|+ .|++|++++ ++. -++.++
T Consensus 124 l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~--~~~~~~ 182 (315)
T 3goh_A 124 LPCPLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASL--SQALAA 182 (315)
T ss_dssp SHHHHHHHHHHHTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSC--CHHHHH
T ss_pred CccHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-Chh--hHHHHH
Confidence 33444555555555556688999999995 3555555555 688999999 643 344443
No 331
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=91.16 E-value=1.3 Score=33.84 Aligned_cols=84 Identities=15% Similarity=0.163 Sum_probs=52.3
Q ss_pred ccCCCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc---CCCCC
Q 030935 65 QRYRFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA---SIFDL 138 (169)
Q Consensus 65 ~~~~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~---~~~~~ 138 (169)
++..++||.+|==|++.|+- +..+++.|++|+++|.+.. +.+.+.++..+.+......+..+... .....
T Consensus 3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~----~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g 78 (247)
T 4hp8_A 3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP----DETLDIIAKDGGNASALLIDFADPLAAKDSFTDA 78 (247)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC----HHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTT
T ss_pred CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH----HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhC
Confidence 34457899999999888753 4456678999999999853 22333345556655554454443221 11224
Q ss_pred CCcEEEEcCcCCCC
Q 030935 139 NPNIILGADVFYDA 152 (169)
Q Consensus 139 ~fDlIi~sd~iy~~ 152 (169)
+.|+++.+-=+...
T Consensus 79 ~iDiLVNNAGi~~~ 92 (247)
T 4hp8_A 79 GFDILVNNAGIIRR 92 (247)
T ss_dssp CCCEEEECCCCCCC
T ss_pred CCCEEEECCCCCCC
Confidence 78999976655443
No 332
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.12 E-value=0.75 Score=36.59 Aligned_cols=57 Identities=33% Similarity=0.455 Sum_probs=36.6
Q ss_pred chHHHHHHHHH-hccCCCCCCeEEEECCC-CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 53 PCSVILAEYVW-QQRYRFSGANVVELGAG-TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 53 ~~~~~La~~l~-~~~~~~~~~~vLElGcG-tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
+.+...+.+.. +.....+|.+||=+|+| .|+..+.+++ .|++|++++.++ +-++.++
T Consensus 171 ~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~--~~~~~~~ 230 (363)
T 3uog_A 171 PCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSR--EKLDRAF 230 (363)
T ss_dssp TTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHH
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCc--hhHHHHH
Confidence 33444444444 34456678999999976 2555555555 588999999883 3455443
No 333
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=90.82 E-value=0.39 Score=40.32 Aligned_cols=41 Identities=12% Similarity=0.069 Sum_probs=34.1
Q ss_pred CeEEEECCCCCHHHHHHHHhCCe-EEEEcCCCcHHHHHHHHHHH
Q 030935 72 ANVVELGAGTSLPGLVAAKVGSN-VTLTDDSNRIEVLKNMRRVC 114 (169)
Q Consensus 72 ~~vLElGcGtGl~~l~~a~~ga~-V~~~D~~~~~~~l~~~~~n~ 114 (169)
-+++||.||.|.+++.+.+.|.+ |.++|++ +.+.+.-+.|.
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d--~~A~~ty~~N~ 130 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWN--KHAVRTYKANH 130 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCC--HHHHHHHHHHS
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCC--HHHHHHHHHhc
Confidence 47999999999999999998885 8999999 44666666664
No 334
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.79 E-value=0.7 Score=36.41 Aligned_cols=42 Identities=12% Similarity=0.008 Sum_probs=29.9
Q ss_pred CCCCCCeEEEECCC-CCHHHHHHHH-h--CCeEEEEcCCCcHHHHHHHH
Q 030935 67 YRFSGANVVELGAG-TSLPGLVAAK-V--GSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 67 ~~~~~~~vLElGcG-tGl~~l~~a~-~--ga~V~~~D~~~~~~~l~~~~ 111 (169)
.. +|.+||=+|+| .|+..+.+|+ . |++|++++.++ +-++.++
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~--~~~~~~~ 213 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSK--KHRDFAL 213 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCH--HHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCH--HHHHHHH
Confidence 45 88999999986 2555555555 6 89999999884 3455544
No 335
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=90.75 E-value=0.74 Score=35.23 Aligned_cols=84 Identities=13% Similarity=0.105 Sum_probs=53.0
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc------CC--C
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA------SI--F 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~------~~--~ 136 (169)
.++||++|=-|++.|+- +..+++.|++|+++|.+ ++.++.+.+.+...+.++.....+..+... .. .
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~--~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIR--ATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC--HHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 46899999999887743 34556679999999998 456666666666666554433333332111 00 1
Q ss_pred CCCCcEEEEcCcCCCCC
Q 030935 137 DLNPNIILGADVFYDAS 153 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~~~ 153 (169)
-.+.|+++.+-=+....
T Consensus 84 ~G~iDiLVNNAG~~~~~ 100 (255)
T 4g81_D 84 GIHVDILINNAGIQYRK 100 (255)
T ss_dssp TCCCCEEEECCCCCCCC
T ss_pred CCCCcEEEECCCCCCCC
Confidence 13789999776555443
No 336
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.69 E-value=0.93 Score=35.63 Aligned_cols=51 Identities=24% Similarity=0.165 Sum_probs=33.5
Q ss_pred HHHHHhccCCCCCCeEEEECCC-CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 59 AEYVWQQRYRFSGANVVELGAG-TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 59 a~~l~~~~~~~~~~~vLElGcG-tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
+.+........+|.+||-+|+| .|+..+.+++ .|++|++++.++ +-++.++
T Consensus 153 a~~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~--~~~~~~~ 205 (339)
T 1rjw_A 153 TYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGD--EKLELAK 205 (339)
T ss_dssp HHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH--HHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHH
Confidence 3344433345678899999996 3555555554 588999999984 4555544
No 337
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=90.21 E-value=0.98 Score=35.72 Aligned_cols=96 Identities=11% Similarity=0.102 Sum_probs=51.9
Q ss_pred CeEEEECCCCCHHHHHHHH----hC--C--eEEEEcCCCc------HHHHHHHHHHHHHh-----CCcceEEEEEcCCCC
Q 030935 72 ANVVELGAGTSLPGLVAAK----VG--S--NVTLTDDSNR------IEVLKNMRRVCEMN-----KLNCRVMGLTWGFLD 132 (169)
Q Consensus 72 ~~vLElGcGtGl~~l~~a~----~g--a--~V~~~D~~~~------~~~l~~~~~n~~~n-----~~~~~~~~l~~~~~~ 132 (169)
-+|||+|-|||+-.+.+.+ .+ . +.+.+|..+. ++.+..+...+..+ +..+. ..+.+|+..
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~-L~l~~GDa~ 176 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLS-LKVLLGDAR 176 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEE-EEEEESCHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEE-EEEEechHH
Confidence 4799999999997665432 23 2 4556664320 01112211112111 12222 346677754
Q ss_pred cCC---CCCCCcEEEEcCcCCCCCCh----HHHHHHHHHhccCC
Q 030935 133 ASI---FDLNPNIILGADVFYDASGK----ICAFEILICSLFPI 169 (169)
Q Consensus 133 ~~~---~~~~fDlIi~sd~iy~~~~~----~~l~~~l~~~L~p~ 169 (169)
+.+ ...++|+|+- |.+=-..++ +.+++.++++++|+
T Consensus 177 ~~l~~l~~~~~Da~fl-DgFsP~kNPeLWs~e~f~~l~~~~~pg 219 (308)
T 3vyw_A 177 KRIKEVENFKADAVFH-DAFSPYKNPELWTLDFLSLIKERIDEK 219 (308)
T ss_dssp HHGGGCCSCCEEEEEE-CCSCTTTSGGGGSHHHHHHHHTTEEEE
T ss_pred HHHhhhcccceeEEEe-CCCCcccCcccCCHHHHHHHHHHhCCC
Confidence 422 2237888885 654322332 57999999999885
No 338
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.16 E-value=0.76 Score=36.30 Aligned_cols=46 Identities=30% Similarity=0.348 Sum_probs=31.0
Q ss_pred hccCCCCCCeEEEECCCC-CHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 64 QQRYRFSGANVVELGAGT-SLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 64 ~~~~~~~~~~vLElGcGt-Gl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
+.....+|.+||=+|+|. |+..+.+++ .|++|++++.++ +-++.++
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~--~~~~~~~ 209 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSP--RRLEVAK 209 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCH--HHHHHHH
Confidence 333455788999999862 555555555 588999999884 4555544
No 339
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=89.98 E-value=0.86 Score=35.91 Aligned_cols=55 Identities=20% Similarity=0.084 Sum_probs=34.9
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCC--CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 55 SVILAEYVWQQRYRFSGANVVELGAG--TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 55 ~~~La~~l~~~~~~~~~~~vLElGcG--tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
+...+.+........+|++||-.|++ .|...+.+++ .|++|++++.++. -++.++
T Consensus 154 ~~~ta~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~--~~~~~~ 211 (347)
T 2hcy_A 154 AGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEG--KEELFR 211 (347)
T ss_dssp HHHHHHHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTT--HHHHHH
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHH--HHHHHH
Confidence 33334444444455678999999983 4555444444 6889999998753 444443
No 340
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=89.76 E-value=0.92 Score=36.12 Aligned_cols=95 Identities=12% Similarity=0.104 Sum_probs=57.2
Q ss_pred CCeEEEECCCCCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhC----------------------CcceEEEEEc
Q 030935 71 GANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNK----------------------LNCRVMGLTW 128 (169)
Q Consensus 71 ~~~vLElGcGtGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~----------------------~~~~~~~l~~ 128 (169)
.+.|+.||||..-...-+...+..+...|++- |++++.-++.+..++ -.......+.
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 46899999999988887776544444444443 567776666555431 1122222222
Q ss_pred CCC------CcCC-CCCCCcEEEEcCcCCCC--CChHHHHHHHHHhc
Q 030935 129 GFL------DASI-FDLNPNIILGADVFYDA--SGKICAFEILICSL 166 (169)
Q Consensus 129 ~~~------~~~~-~~~~fDlIi~sd~iy~~--~~~~~l~~~l~~~L 166 (169)
.+. .... .+..+.++++--++++. +....+++.+.+..
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~ 223 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF 223 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC
Confidence 221 0111 22467899988888765 55677888887755
No 341
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=89.38 E-value=0.56 Score=37.46 Aligned_cols=46 Identities=15% Similarity=0.320 Sum_probs=30.7
Q ss_pred hccCCCCCCeEEEECCC-CCHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 64 QQRYRFSGANVVELGAG-TSLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 64 ~~~~~~~~~~vLElGcG-tGl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
+.....+|.+||=+|+| .|+..+.+|+ .|+ +|+++|.++. -++.++
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~--~~~~a~ 237 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGE--KFPKAK 237 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGG--GHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH--HHHHHH
Confidence 33455678899999976 3555555555 588 8999998853 444443
No 342
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=89.09 E-value=1.3 Score=35.05 Aligned_cols=44 Identities=27% Similarity=0.277 Sum_probs=29.7
Q ss_pred cCCCCCCeEEEECCC-CCHHHHHHHH-h-CCeEEEEcCCCcHHHHHHHH
Q 030935 66 RYRFSGANVVELGAG-TSLPGLVAAK-V-GSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 66 ~~~~~~~~vLElGcG-tGl~~l~~a~-~-ga~V~~~D~~~~~~~l~~~~ 111 (169)
....+|.+||=+|+| .|+..+.+|+ . |++|+++|.++ +-++.++
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~--~~~~~~~ 228 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKE--EKLKLAE 228 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSH--HHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCH--HHHHHHH
Confidence 455678999999985 3334444444 5 88999999883 3444443
No 343
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=89.02 E-value=0.61 Score=37.20 Aligned_cols=46 Identities=13% Similarity=0.271 Sum_probs=30.9
Q ss_pred hccCCCCCCeEEEECCC-CCHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 64 QQRYRFSGANVVELGAG-TSLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 64 ~~~~~~~~~~vLElGcG-tGl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
+.....+|.+||=+|+| .|+..+.+|+ .|+ +|++++.++. -++.++
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~--~~~~~~ 234 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPD--KFEKAK 234 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGG--GHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH--HHHHHH
Confidence 33445678899999975 2555555555 588 8999998853 444443
No 344
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=88.91 E-value=1.1 Score=35.88 Aligned_cols=57 Identities=21% Similarity=0.217 Sum_probs=36.0
Q ss_pred chHHHHHHHHH-hccCCCCCCeEEEECCC-CCHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 53 PCSVILAEYVW-QQRYRFSGANVVELGAG-TSLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 53 ~~~~~La~~l~-~~~~~~~~~~vLElGcG-tGl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
+.+...+.+.. +.....+|.+||=+|+| .|+..+.+|+ .|+ +|+++|.++. -++.++
T Consensus 175 ~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~--~~~~a~ 235 (378)
T 3uko_A 175 GCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSK--KYETAK 235 (378)
T ss_dssp GTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTT--HHHHHH
T ss_pred hhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH--HHHHHH
Confidence 33444444433 44455678899999986 3555555555 588 8999998863 444443
No 345
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=88.88 E-value=0.47 Score=34.12 Aligned_cols=43 Identities=16% Similarity=0.176 Sum_probs=28.1
Q ss_pred cCCCCCCeEEEECCC--CCHHHHHHH-HhCCeEEEEcCCCcHHHHHHH
Q 030935 66 RYRFSGANVVELGAG--TSLPGLVAA-KVGSNVTLTDDSNRIEVLKNM 110 (169)
Q Consensus 66 ~~~~~~~~vLElGcG--tGl~~l~~a-~~ga~V~~~D~~~~~~~l~~~ 110 (169)
....+|++||-.|++ .|...+.++ ..|++|++++.++ +.++.+
T Consensus 34 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~--~~~~~~ 79 (198)
T 1pqw_A 34 GRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD--AKREML 79 (198)
T ss_dssp SCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH--HHHHHH
T ss_pred hCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH--HHHHHH
Confidence 345678899999953 343333333 3689999999883 455444
No 346
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=88.88 E-value=1.4 Score=34.66 Aligned_cols=51 Identities=18% Similarity=0.183 Sum_probs=33.1
Q ss_pred HHHHHhccCCCCCCeEEEECCCCC--HHHHHHHH-h-CCeEEEEcCCCcHHHHHHHH
Q 030935 59 AEYVWQQRYRFSGANVVELGAGTS--LPGLVAAK-V-GSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 59 a~~l~~~~~~~~~~~vLElGcGtG--l~~l~~a~-~-ga~V~~~D~~~~~~~l~~~~ 111 (169)
+..........++++||-.|+|+| ...+.+++ . |++|+++|.++ +-++.++
T Consensus 159 a~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~--~~~~~~~ 213 (347)
T 1jvb_A 159 TYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE--EAVEAAK 213 (347)
T ss_dssp HHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH--HHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCH--HHHHHHH
Confidence 334444445567899999999743 44444443 6 89999999884 4555554
No 347
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=88.76 E-value=0.68 Score=36.86 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=30.7
Q ss_pred hccCCCCCCeEEEECCC-CCHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 64 QQRYRFSGANVVELGAG-TSLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 64 ~~~~~~~~~~vLElGcG-tGl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
+.....+|.+||=+|+| .|+..+.+|+ .|+ +|++++.++. -++.++
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~--~~~~~~ 232 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKD--KFARAK 232 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGG--GHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH--HHHHHH
Confidence 33445678899999975 2455555554 688 8999998853 445444
No 348
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=88.70 E-value=1 Score=35.38 Aligned_cols=47 Identities=6% Similarity=-0.017 Sum_probs=32.8
Q ss_pred hccCCCCCCeEEEECCC--CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHHH
Q 030935 64 QQRYRFSGANVVELGAG--TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMRR 112 (169)
Q Consensus 64 ~~~~~~~~~~vLElGcG--tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~~ 112 (169)
+.....+|++||=.|+| .|...+.+++ .|++|++++.++. -++.+++
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~--~~~~~~~ 187 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNK--HTEELLR 187 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSST--THHHHHH
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHh
Confidence 44456678999999997 4555555555 6899999998853 4455443
No 349
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=88.24 E-value=1.7 Score=34.04 Aligned_cols=52 Identities=25% Similarity=0.275 Sum_probs=35.1
Q ss_pred HHHHHHhc-cCCCCCCeEEEECC--CCCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 58 LAEYVWQQ-RYRFSGANVVELGA--GTSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 58 La~~l~~~-~~~~~~~~vLElGc--GtGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
.+.+.... ....++++||-.|+ |.|...+.+++ .|++|++++.++ +-++.++
T Consensus 153 ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~--~~~~~~~ 208 (343)
T 2eih_A 153 TAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSE--DKLRRAK 208 (343)
T ss_dssp HHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSH--HHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHH
Confidence 33344433 34557889999998 46666666555 688999999983 4555554
No 350
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=88.21 E-value=1.1 Score=35.53 Aligned_cols=48 Identities=29% Similarity=0.309 Sum_probs=32.6
Q ss_pred HhccCCCCCCeEEEECCCC-CHHHHHHHH-hCCe-EEEEcCCCcHHHHHHHHH
Q 030935 63 WQQRYRFSGANVVELGAGT-SLPGLVAAK-VGSN-VTLTDDSNRIEVLKNMRR 112 (169)
Q Consensus 63 ~~~~~~~~~~~vLElGcGt-Gl~~l~~a~-~ga~-V~~~D~~~~~~~l~~~~~ 112 (169)
.......+|.+||=+|+|. |+..+.+|+ .|++ |+++|.++ +-++.+++
T Consensus 172 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~--~~~~~a~~ 222 (363)
T 3m6i_A 172 LQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDE--GRLKFAKE 222 (363)
T ss_dssp HHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCH--HHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH--HHHHHHHH
Confidence 3344456788999999852 555555555 5786 99999984 46666655
No 351
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=88.15 E-value=1.2 Score=34.94 Aligned_cols=52 Identities=19% Similarity=0.199 Sum_probs=34.1
Q ss_pred HHHHHHhcc--CCCCCCeEEEECCCC-CHHHHHHHH-h-CCeEEEEcCCCcHHHHHHHH
Q 030935 58 LAEYVWQQR--YRFSGANVVELGAGT-SLPGLVAAK-V-GSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 58 La~~l~~~~--~~~~~~~vLElGcGt-Gl~~l~~a~-~-ga~V~~~D~~~~~~~l~~~~ 111 (169)
.+.+..... ...+|.+||=+|+|. |+.++.+++ . +++|+++|.++ +-++.++
T Consensus 157 ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~--~~~~~~~ 213 (345)
T 3jv7_A 157 TPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDD--DRLALAR 213 (345)
T ss_dssp HHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCH--HHHHHHH
T ss_pred HHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCH--HHHHHHH
Confidence 344444442 456788999999863 666666665 4 56999999984 3555443
No 352
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=88.07 E-value=1.5 Score=33.92 Aligned_cols=40 Identities=18% Similarity=0.195 Sum_probs=26.9
Q ss_pred HHhccCCCCCCeEEEECCCCCH---HHHHHHHhCC-eEEEEcCCC
Q 030935 62 VWQQRYRFSGANVVELGAGTSL---PGLVAAKVGS-NVTLTDDSN 102 (169)
Q Consensus 62 l~~~~~~~~~~~vLElGcGtGl---~~l~~a~~ga-~V~~~D~~~ 102 (169)
+.+.....+++++|=+|+| |. +...+++.|+ +|+.++.+.
T Consensus 118 l~~~~~~l~~k~vlVlGaG-G~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 118 MEEGLPNAKLDSVVQVGAG-GVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp HHHHCTTCCCSEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred HHHhCcCcCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEECCH
Confidence 3333345688999999997 32 2234455687 799999884
No 353
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=87.99 E-value=0.78 Score=36.56 Aligned_cols=46 Identities=15% Similarity=0.247 Sum_probs=30.5
Q ss_pred hccCCCCCCeEEEECCCC-CHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 64 QQRYRFSGANVVELGAGT-SLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 64 ~~~~~~~~~~vLElGcGt-Gl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
+.....+|.+||=+|+|. |+..+.+|+ .|+ +|++++.++. -++.++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~--~~~~~~ 233 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKD--KFAKAK 233 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGG--GHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH--HHHHHH
Confidence 334456788999999752 555555555 588 8999998853 444443
No 354
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=87.94 E-value=1.5 Score=34.19 Aligned_cols=52 Identities=19% Similarity=0.070 Sum_probs=32.9
Q ss_pred HHHHHHH-hccCCCCCCeEEEECCC--CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHH
Q 030935 57 ILAEYVW-QQRYRFSGANVVELGAG--TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNM 110 (169)
Q Consensus 57 ~La~~l~-~~~~~~~~~~vLElGcG--tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~ 110 (169)
..+.+.. +.....+|++||-.||+ .|...+.+++ .|++|++++.++ +-++.+
T Consensus 131 ~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~--~~~~~~ 186 (333)
T 1v3u_A 131 LTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD--EKIAYL 186 (333)
T ss_dssp HHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSH--HHHHHH
T ss_pred HHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCH--HHHHHH
Confidence 3444444 33455678999999983 4444444443 688999999873 455544
No 355
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=87.67 E-value=3 Score=31.72 Aligned_cols=81 Identities=9% Similarity=0.019 Sum_probs=48.3
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC-----
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD----- 137 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~----- 137 (169)
.++++++|=-|++.|+- ...+++.|++|++++... ++.++.+...+...+..+.+...+..+... ....
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGD-AEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC-HHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 45788899999776642 234455789999999744 355665555565555555544444443221 0001
Q ss_pred -CCCcEEEEcCcC
Q 030935 138 -LNPNIILGADVF 149 (169)
Q Consensus 138 -~~fDlIi~sd~i 149 (169)
.+.|++|.+--+
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 278999966544
No 356
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=87.61 E-value=1.6 Score=34.55 Aligned_cols=45 Identities=27% Similarity=0.210 Sum_probs=29.2
Q ss_pred HHHHHhccCCC-CCCeEEEECCC-CCHHHHHHHH-hCCeEEEEcCCCc
Q 030935 59 AEYVWQQRYRF-SGANVVELGAG-TSLPGLVAAK-VGSNVTLTDDSNR 103 (169)
Q Consensus 59 a~~l~~~~~~~-~~~~vLElGcG-tGl~~l~~a~-~ga~V~~~D~~~~ 103 (169)
+.......... +|.+||=+|+| .|+..+.+++ .|++|++++.++.
T Consensus 168 a~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~ 215 (357)
T 2cf5_A 168 VYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNK 215 (357)
T ss_dssp HHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTT
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChH
Confidence 33333334455 78899999975 3444444444 5889999999853
No 357
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=87.58 E-value=1.1 Score=34.99 Aligned_cols=57 Identities=18% Similarity=0.085 Sum_probs=37.1
Q ss_pred cchHHHHHHHHH-hccCCCCCCeEEEECCC--CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHH
Q 030935 52 WPCSVILAEYVW-QQRYRFSGANVVELGAG--TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNM 110 (169)
Q Consensus 52 W~~~~~La~~l~-~~~~~~~~~~vLElGcG--tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~ 110 (169)
.+.+...|.+.+ +.....+|++||=.|++ .|...+.+++ .|++|++++.++ +-++.+
T Consensus 130 l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~--~~~~~~ 190 (336)
T 4b7c_A 130 LGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGA--EKCRFL 190 (336)
T ss_dssp TSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--HHHHHH
T ss_pred cccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHH
Confidence 344445555555 44556688999999983 4555555554 688999999883 344443
No 358
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=87.47 E-value=0.71 Score=36.06 Aligned_cols=44 Identities=20% Similarity=0.089 Sum_probs=30.2
Q ss_pred cCCCCCCeEEEECC-C-CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 66 RYRFSGANVVELGA-G-TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 66 ~~~~~~~~vLElGc-G-tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
....+|++||=.|+ | .|...+.+++ .|++|++++.++ +-++.++
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~--~~~~~~~ 182 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSP--EKAAHAK 182 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSH--HHHHHHH
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHH
Confidence 34557889999983 3 5555555554 689999999883 4555554
No 359
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=87.41 E-value=1.8 Score=34.65 Aligned_cols=51 Identities=35% Similarity=0.441 Sum_probs=32.9
Q ss_pred HHHHHhccC-CCCCCeEEEECCC-CCHHHHHHHH-hC-CeEEEEcCCCcHHHHHHHH
Q 030935 59 AEYVWQQRY-RFSGANVVELGAG-TSLPGLVAAK-VG-SNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 59 a~~l~~~~~-~~~~~~vLElGcG-tGl~~l~~a~-~g-a~V~~~D~~~~~~~l~~~~ 111 (169)
+.+.+.... ..+|.+||=+|+| .|+..+.+|+ .| ++|++++.++ +-++.++
T Consensus 183 a~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~--~~~~~~~ 237 (380)
T 1vj0_A 183 AYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSP--NRLKLAE 237 (380)
T ss_dssp HHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCH--HHHHHHH
T ss_pred HHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCH--HHHHHHH
Confidence 333344445 5678899999965 3555555555 58 4999999883 3555544
No 360
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=87.05 E-value=1.1 Score=35.20 Aligned_cols=58 Identities=22% Similarity=0.148 Sum_probs=35.2
Q ss_pred chHHHHHHHHHh-ccCCC------CCCeEEEEC-CC-CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHHH
Q 030935 53 PCSVILAEYVWQ-QRYRF------SGANVVELG-AG-TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMRR 112 (169)
Q Consensus 53 ~~~~~La~~l~~-~~~~~------~~~~vLElG-cG-tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~~ 112 (169)
|.+...+.+.+. ..... +|.+||=.| +| .|+..+.+++ .|++|++++.++ +-++.+++
T Consensus 126 ~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~--~~~~~~~~ 193 (346)
T 3fbg_A 126 PLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRN--ETIEWTKK 193 (346)
T ss_dssp HHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSH--HHHHHHHH
T ss_pred chhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHh
Confidence 555555555443 33333 688999885 43 4555555554 588999999973 45555543
No 361
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=86.99 E-value=1.9 Score=33.94 Aligned_cols=50 Identities=28% Similarity=0.264 Sum_probs=32.5
Q ss_pred HHHHHhccCCCCCCeEEEECCC-CCHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 59 AEYVWQQRYRFSGANVVELGAG-TSLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 59 a~~l~~~~~~~~~~~vLElGcG-tGl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
+.+....... +|.+||-+|+| .|...+.+++ .|+ +|++++.++ +-++.++
T Consensus 157 a~~~l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~--~~~~~~~ 209 (348)
T 2d8a_A 157 AVDTVLAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSD--FRRELAK 209 (348)
T ss_dssp HHHHHTTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCH--HHHHHHH
T ss_pred HHHHHHhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH--HHHHHHH
Confidence 3334444455 89999999995 2444444444 588 899999983 4555544
No 362
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.86 E-value=4.2 Score=30.49 Aligned_cols=80 Identities=14% Similarity=0.155 Sum_probs=50.7
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------ 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------ 136 (169)
.++++++|=-|++.|+- ...+++.|++|++++.+ ++-++.+.+.+...+..+.+...+..+... ...
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAART--VERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45789999999887753 33456679999999998 456666666666555555444444443211 000
Q ss_pred CCCCcEEEEcCcC
Q 030935 137 DLNPNIILGADVF 149 (169)
Q Consensus 137 ~~~fDlIi~sd~i 149 (169)
-.+.|++|.+--+
T Consensus 86 ~g~id~lv~nAg~ 98 (264)
T 3ucx_A 86 YGRVDVVINNAFR 98 (264)
T ss_dssp TSCCSEEEECCCS
T ss_pred cCCCcEEEECCCC
Confidence 1378999976533
No 363
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=86.68 E-value=0.83 Score=36.38 Aligned_cols=57 Identities=18% Similarity=0.159 Sum_probs=37.0
Q ss_pred chHHHHHHHHH-hccCCC-----CCCeEEEEC-CC-CCHHHHHHHHh--CCeEEEEcCCCcHHHHHHHH
Q 030935 53 PCSVILAEYVW-QQRYRF-----SGANVVELG-AG-TSLPGLVAAKV--GSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 53 ~~~~~La~~l~-~~~~~~-----~~~~vLElG-cG-tGl~~l~~a~~--ga~V~~~D~~~~~~~l~~~~ 111 (169)
|.+...+.+.+ ...... +|.+||=.| +| .|+..+.+|+. |++|++++.++ +-++.++
T Consensus 148 ~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~--~~~~~~~ 214 (363)
T 4dvj_A 148 PLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRP--ETQEWVK 214 (363)
T ss_dssp HHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSH--HHHHHHH
T ss_pred hhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCH--HHHHHHH
Confidence 44555555554 333333 577899998 55 57777777874 67999999983 3455543
No 364
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=85.79 E-value=1.4 Score=34.64 Aligned_cols=54 Identities=19% Similarity=0.277 Sum_probs=34.9
Q ss_pred HHHHHHHH-hccCCCCCCeEEEECC--CCCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 56 VILAEYVW-QQRYRFSGANVVELGA--GTSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 56 ~~La~~l~-~~~~~~~~~~vLElGc--GtGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
...+.+.+ +.....+|++||=.|+ |.|...+.+++ .|++|++++.++. -++.++
T Consensus 144 ~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~--~~~~~~ 201 (342)
T 4eye_A 144 YHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTA--ATEFVK 201 (342)
T ss_dssp HHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGG--GHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHH
Confidence 33444444 3445567899999997 35566665555 6889999999753 444444
No 365
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=85.74 E-value=1.8 Score=33.81 Aligned_cols=55 Identities=18% Similarity=0.036 Sum_probs=34.8
Q ss_pred HHHHHHHHH-hccCCCCCCeEEEECC--CCCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 55 SVILAEYVW-QQRYRFSGANVVELGA--GTSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 55 ~~~La~~l~-~~~~~~~~~~vLElGc--GtGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
+...+.+.+ +.....+|++||-.|+ |.|...+.+++ .|++|++++.++ +-++.++
T Consensus 139 ~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~--~~~~~~~ 197 (345)
T 2j3h_A 139 PGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSK--EKVDLLK 197 (345)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--HHHHHHH
T ss_pred cHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHH
Confidence 334444444 3345567899999997 35555554444 688999999883 3454443
No 366
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=85.74 E-value=3.5 Score=31.07 Aligned_cols=83 Identities=11% Similarity=0.167 Sum_probs=49.2
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC-----
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD----- 137 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~----- 137 (169)
.++++++|=-|++.|+- ...+++.|++|++++... .+.++.+.+.++..+..+.+...+..+... ....
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANS-TKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788999999776642 234455789999988765 345565555566555555444444333211 0000
Q ss_pred -CCCcEEEEcCcCCC
Q 030935 138 -LNPNIILGADVFYD 151 (169)
Q Consensus 138 -~~fDlIi~sd~iy~ 151 (169)
.+.|++|.+--+..
T Consensus 94 ~g~id~lvnnAg~~~ 108 (270)
T 3is3_A 94 FGHLDIAVSNSGVVS 108 (270)
T ss_dssp HSCCCEEECCCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 27899996655443
No 367
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=85.61 E-value=1.1 Score=36.69 Aligned_cols=44 Identities=9% Similarity=-0.010 Sum_probs=34.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC---e----EEEEcCCCcHHHHHHHHHHHH
Q 030935 70 SGANVVELGAGTSLPGLVAAKVGS---N----VTLTDDSNRIEVLKNMRRVCE 115 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~a~~ga---~----V~~~D~~~~~~~l~~~~~n~~ 115 (169)
+.-+|+||.||.|..++.+.+.|. - |.++|++ +.+++.-+.|..
T Consensus 9 ~~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid--~~A~~ty~~n~~ 59 (403)
T 4dkj_A 9 KVIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWF--VDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCB--HHHHHHHHHHHC
T ss_pred ccceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecC--HHHHHHHHHHcC
Confidence 334899999999999999988772 3 7889999 457777777664
No 368
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=85.41 E-value=4.1 Score=31.30 Aligned_cols=81 Identities=14% Similarity=0.137 Sum_probs=49.9
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------ 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------ 136 (169)
.+++++||=.|++.|+- ...+++.|++|++++.+ ++-++.+.+.+...+..+.+...+..+... ...
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVD--QPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 45788999999876642 23345568999999998 446666666666555555544444333211 000
Q ss_pred CCCCcEEEEcCcCC
Q 030935 137 DLNPNIILGADVFY 150 (169)
Q Consensus 137 ~~~fDlIi~sd~iy 150 (169)
-.++|++|.+--+.
T Consensus 106 ~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 106 LGGVDVVFSNAGIV 119 (301)
T ss_dssp HSSCSEEEECCCCC
T ss_pred CCCCCEEEECCCcC
Confidence 02789999765544
No 369
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=85.34 E-value=2.4 Score=33.67 Aligned_cols=50 Identities=24% Similarity=0.170 Sum_probs=30.3
Q ss_pred chHHHHHHHHHhccCCC-CCCeEEEECCC-CCHHHHHHHH-hCCeEEEEcCCC
Q 030935 53 PCSVILAEYVWQQRYRF-SGANVVELGAG-TSLPGLVAAK-VGSNVTLTDDSN 102 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~-~~~~vLElGcG-tGl~~l~~a~-~ga~V~~~D~~~ 102 (169)
+.+...+.......... +|.+||=+|+| .|+..+.+++ .|++|++++.++
T Consensus 169 ~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~ 221 (366)
T 1yqd_A 169 LCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSP 221 (366)
T ss_dssp GTHHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred hhhHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 33333344444434445 78899999974 2333344444 588999999885
No 370
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=85.00 E-value=1.1 Score=39.46 Aligned_cols=39 Identities=8% Similarity=-0.105 Sum_probs=32.0
Q ss_pred eEEEECCCCCHHHHHHHHhC------C-eEEEEcCCCcHHHHHHHHHH
Q 030935 73 NVVELGAGTSLPGLVAAKVG------S-NVTLTDDSNRIEVLKNMRRV 113 (169)
Q Consensus 73 ~vLElGcGtGl~~l~~a~~g------a-~V~~~D~~~~~~~l~~~~~n 113 (169)
+||||-||.|.+++-+.+.| . -+.++|++ +.+++.-+.|
T Consensus 214 tvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d--~~A~~Ty~~N 259 (784)
T 4ft4_B 214 TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFN--SFACQSLKYN 259 (784)
T ss_dssp EEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESC--HHHHHHHHHH
T ss_pred eEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCC--HHHHHHHHHH
Confidence 69999999999999888766 3 47899999 4577776666
No 371
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=84.95 E-value=3.6 Score=30.78 Aligned_cols=79 Identities=19% Similarity=0.212 Sum_probs=47.8
Q ss_pred CCCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC-----
Q 030935 68 RFSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF----- 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~----- 136 (169)
.+++++||=.|++.| +|..+ ++.|++|++++.+ ++-++.+...+...+..+.+...+..+... ...
T Consensus 26 ~l~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 26 SLSGQVAVVTGASRG-IGAAIARKLGSLGARVVLTARD--VEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA 102 (262)
T ss_dssp TTTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 457889998887654 45444 4468999999998 446666666666555554444443332211 000
Q ss_pred -CCCCcEEEEcCcC
Q 030935 137 -DLNPNIILGADVF 149 (169)
Q Consensus 137 -~~~fDlIi~sd~i 149 (169)
-.+.|++|.+--+
T Consensus 103 ~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 103 AHGRCDVLVNNAGV 116 (262)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 1268999976554
No 372
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=84.67 E-value=1.9 Score=39.46 Aligned_cols=40 Identities=8% Similarity=-0.018 Sum_probs=32.7
Q ss_pred CeEEEECCCCCHHHHHHHHhCC-e-EEEEcCCCcHHHHHHHHHH
Q 030935 72 ANVVELGAGTSLPGLVAAKVGS-N-VTLTDDSNRIEVLKNMRRV 113 (169)
Q Consensus 72 ~~vLElGcGtGl~~l~~a~~ga-~-V~~~D~~~~~~~l~~~~~n 113 (169)
.+++||.||.|.+++.+.+.|. + |.++|+++ .+.+.-+.|
T Consensus 541 l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~--~A~~ty~~N 582 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWD--PAAQAFRLN 582 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHTSEEEEEEECSSH--HHHHHHHHH
T ss_pred CeEEEeccCccHHHHHHHHCCCCceEEEEECCH--HHHHHHHHh
Confidence 3799999999999999999997 4 78999994 466655555
No 373
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.65 E-value=2.5 Score=31.62 Aligned_cols=81 Identities=16% Similarity=0.002 Sum_probs=48.8
Q ss_pred CCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC-----C
Q 030935 69 FSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD-----L 138 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~-----~ 138 (169)
++++++|=-|++.|+- ...+++.|++|++++.+. +-++.+...++..+..+.+...+..+... .... .
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNG--EKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSG--GGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 4678899999876642 234455689999999985 35666666666555554444444333211 0000 3
Q ss_pred CCcEEEEcCcCCC
Q 030935 139 NPNIILGADVFYD 151 (169)
Q Consensus 139 ~fDlIi~sd~iy~ 151 (169)
++|++|.+--+..
T Consensus 83 ~id~lv~nAg~~~ 95 (252)
T 3h7a_A 83 PLEVTIFNVGANV 95 (252)
T ss_dssp CEEEEEECCCCCC
T ss_pred CceEEEECCCcCC
Confidence 7899987665543
No 374
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=84.55 E-value=0.85 Score=35.53 Aligned_cols=48 Identities=25% Similarity=0.185 Sum_probs=32.2
Q ss_pred chHHHHHHHHHhccCCCCCCeEEEEC-CC-CCHHHHHHHH-hCCeEEEEcC
Q 030935 53 PCSVILAEYVWQQRYRFSGANVVELG-AG-TSLPGLVAAK-VGSNVTLTDD 100 (169)
Q Consensus 53 ~~~~~La~~l~~~~~~~~~~~vLElG-cG-tGl~~l~~a~-~ga~V~~~D~ 100 (169)
|.+...+.+..+.....+|.+||=.| +| .|+..+.+++ .|++|++++.
T Consensus 135 ~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~ 185 (321)
T 3tqh_A 135 PTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS 185 (321)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred hhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec
Confidence 44444455555555566889999887 44 5666666665 5889999974
No 375
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=84.34 E-value=2 Score=37.25 Aligned_cols=97 Identities=15% Similarity=0.078 Sum_probs=53.4
Q ss_pred CeEEEECCCCCHHHHHHHHh------------C--CeEEEEcCCCc-HHHHHHHH-----------HHHHHhCC---cc-
Q 030935 72 ANVVELGAGTSLPGLVAAKV------------G--SNVTLTDDSNR-IEVLKNMR-----------RVCEMNKL---NC- 121 (169)
Q Consensus 72 ~~vLElGcGtGl~~l~~a~~------------g--a~V~~~D~~~~-~~~l~~~~-----------~n~~~n~~---~~- 121 (169)
.+|+|+|.|+|+..+.+.+. . -+++.++..+. .+-+..+- .-++.... .+
T Consensus 60 ~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 139 (689)
T 3pvc_A 60 CIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGCH 139 (689)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEE
T ss_pred eEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCce
Confidence 48999999999988877553 1 26888888542 22222211 11111100 01
Q ss_pred --------eEEEEEcCCCCcCCC------CCCCcEEEEcCcC---CCCCC-hHHHHHHHHHhccCC
Q 030935 122 --------RVMGLTWGFLDASIF------DLNPNIILGADVF---YDASG-KICAFEILICSLFPI 169 (169)
Q Consensus 122 --------~~~~l~~~~~~~~~~------~~~fDlIi~sd~i---y~~~~-~~~l~~~l~~~L~p~ 169 (169)
....+.+|+..+.+. ..++|.++. |-+ ++++. -+.+++.+.+.++|+
T Consensus 140 r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~fl-D~f~p~~np~~w~~~~~~~l~~~~~~g 204 (689)
T 3pvc_A 140 RILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFL-DGFAPAKNPDMWNEQLFNAMARMTRPG 204 (689)
T ss_dssp EEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEE-CSSCC--CCTTCSHHHHHHHHHHEEEE
T ss_pred EEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEE-CCCCCCCChhhhhHHHHHHHHHHhCCC
Confidence 123355666533221 247898886 443 12222 377889998888764
No 376
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=84.32 E-value=2.8 Score=33.02 Aligned_cols=54 Identities=19% Similarity=0.115 Sum_probs=33.4
Q ss_pred HHHHHHH-hccCCCCCCeEEEECC-C-CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHHH
Q 030935 57 ILAEYVW-QQRYRFSGANVVELGA-G-TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMRR 112 (169)
Q Consensus 57 ~La~~l~-~~~~~~~~~~vLElGc-G-tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~~ 112 (169)
..+.+.. +.....+|++||=.|+ | .|...+.+++ .|++|++++.++ +-++.+++
T Consensus 153 ~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~--~~~~~~~~ 210 (353)
T 4dup_A 153 FTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGST--GKCEACER 210 (353)
T ss_dssp HHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--HHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHh
Confidence 3344444 3345567889998853 2 4555555554 588999999884 45555543
No 377
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=84.30 E-value=1.9 Score=34.49 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=30.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHH----hCCeEEEEcCCCcHHHHHHHH
Q 030935 69 FSGANVVELGAGTSLPGLVAAK----VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~----~ga~V~~~D~~~~~~~l~~~~ 111 (169)
.+|.+||=+|+|+|.+|+++.+ .|++|++++.++ +-++.++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~--~~~~~~~ 213 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQ--EQADLLK 213 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSH--HHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCH--HHHHHHH
Confidence 4688999998888877765543 588999999873 4555544
No 378
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=84.23 E-value=3.7 Score=31.05 Aligned_cols=81 Identities=6% Similarity=-0.052 Sum_probs=48.2
Q ss_pred CCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------C
Q 030935 69 FSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------D 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------~ 137 (169)
+.++++|=-|++.|+- ...+++.|++|++++.+ ++-++.+.+.+...+..+.+...+..+... ... -
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARR--QARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3577888888776642 23445568999999998 446666666666555554444444333211 000 1
Q ss_pred CCCcEEEEcCcCCC
Q 030935 138 LNPNIILGADVFYD 151 (169)
Q Consensus 138 ~~fDlIi~sd~iy~ 151 (169)
.+.|++|.+--+..
T Consensus 80 g~iD~lVnnAG~~~ 93 (264)
T 3tfo_A 80 GRIDVLVNNAGVMP 93 (264)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 27899997665543
No 379
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=84.20 E-value=2.8 Score=32.63 Aligned_cols=43 Identities=21% Similarity=0.131 Sum_probs=29.4
Q ss_pred CCCCCCeEEEECCC--CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 67 YRFSGANVVELGAG--TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 67 ~~~~~~~vLElGcG--tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
...+|++||=.|++ .|...+.+++ .|++|++++.++ +-++.++
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~--~~~~~~~ 190 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD--EKLKIAK 190 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSH--HHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHH
Confidence 45678899999952 4555555554 588999999973 3444443
No 380
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=83.98 E-value=3.8 Score=32.95 Aligned_cols=43 Identities=30% Similarity=0.359 Sum_probs=29.5
Q ss_pred CCCCCCeEEEECCC-CCHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 67 YRFSGANVVELGAG-TSLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 67 ~~~~~~~vLElGcG-tGl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
...+|.+||=+|+| .|+..+.+|+ .|+ +|+++|.++ +-++.++
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~--~~~~~~~ 255 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSE--VRRNLAK 255 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCH--HHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH--HHHHHHH
Confidence 45678899999985 2444455554 588 899999884 4555554
No 381
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=83.86 E-value=4.1 Score=29.97 Aligned_cols=80 Identities=16% Similarity=0.188 Sum_probs=48.2
Q ss_pred CCCCeEEEECCCCCHHHH----HHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--C----C--C
Q 030935 69 FSGANVVELGAGTSLPGL----VAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--S----I--F 136 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l----~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~----~--~ 136 (169)
++++++|=.|++.| +|. .+++.|++|++++.++ +-++.+...++..+..+.+...+..+... . . .
T Consensus 3 l~~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 3 LNEKVALVTGASRG-IGFEVAHALASKGATVVGTATSQ--ASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAE 79 (247)
T ss_dssp TTTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 36788888886655 444 3445689999999984 46666666666555555444444333211 0 0 1
Q ss_pred CCCCcEEEEcCcCCC
Q 030935 137 DLNPNIILGADVFYD 151 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~ 151 (169)
..++|++|.+--+..
T Consensus 80 ~~~id~li~~Ag~~~ 94 (247)
T 3lyl_A 80 NLAIDILVNNAGITR 94 (247)
T ss_dssp TCCCSEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 136899997765543
No 382
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=83.67 E-value=4.9 Score=29.65 Aligned_cols=78 Identities=13% Similarity=0.153 Sum_probs=47.4
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC-----
Q 030935 69 FSGANVVELGAGTSLPGLV----AAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD----- 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~----~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~----- 137 (169)
++++++|=.|++.| +|.. +++.|++|++++.+ ++-++.+.+.+...+..+.+...+..+... ....
T Consensus 7 ~~~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 7 FENKVGIVTGSGGG-IGQAYAEALAREGAAVVVADIN--AEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCC--HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46889999997655 4443 34568999999998 446666666666555544444343333211 0000
Q ss_pred -CCCcEEEEcCcC
Q 030935 138 -LNPNIILGADVF 149 (169)
Q Consensus 138 -~~fDlIi~sd~i 149 (169)
.++|++|.+--+
T Consensus 84 ~g~id~li~~Ag~ 96 (253)
T 3qiv_A 84 FGGIDYLVNNAAI 96 (253)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 278999976654
No 383
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=83.49 E-value=5.3 Score=29.77 Aligned_cols=81 Identities=12% Similarity=0.030 Sum_probs=49.0
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC-----
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD----- 137 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~----- 137 (169)
.++++++|=-|++.|+- ...+++.|++|++++.+. +-++.+.+.+...+..+.+...+..+... ....
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKS--EGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSH--HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45788999888776643 234455799999999984 46666666566555554444343333211 0000
Q ss_pred -CCCcEEEEcCcCC
Q 030935 138 -LNPNIILGADVFY 150 (169)
Q Consensus 138 -~~fDlIi~sd~iy 150 (169)
.+.|+++.+--+.
T Consensus 87 ~g~id~lv~nAg~~ 100 (256)
T 3gaf_A 87 FGKITVLVNNAGGG 100 (256)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 2789999765544
No 384
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=83.44 E-value=4.3 Score=32.10 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=22.9
Q ss_pred CCeEEEECCC-CCHHHHHHHH-hCCeEEEEcCCC
Q 030935 71 GANVVELGAG-TSLPGLVAAK-VGSNVTLTDDSN 102 (169)
Q Consensus 71 ~~~vLElGcG-tGl~~l~~a~-~ga~V~~~D~~~ 102 (169)
|++||=+|+| .|...+.+++ .|++|++++.++
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRRE 214 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 8999999983 2333333333 688999999985
No 385
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=83.40 E-value=3.5 Score=32.34 Aligned_cols=56 Identities=23% Similarity=0.155 Sum_probs=34.7
Q ss_pred chHHHHHHHHH-hccCCCCCCeEEEECC-C-CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 53 PCSVILAEYVW-QQRYRFSGANVVELGA-G-TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 53 ~~~~~La~~l~-~~~~~~~~~~vLElGc-G-tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
|.+...+.+.+ +.....+|.+||=+|+ | .|+..+.+++ .|++|+++ .+ ++-++.++
T Consensus 132 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~--~~~~~~~~ 191 (343)
T 3gaz_A 132 PLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-AR--GSDLEYVR 191 (343)
T ss_dssp HHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC--HHHHHHHH
T ss_pred hhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eC--HHHHHHHH
Confidence 44444444444 4445567899999994 3 5666665555 58899999 66 33444443
No 386
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=83.32 E-value=4 Score=30.88 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=48.3
Q ss_pred CCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC------
Q 030935 69 FSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD------ 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~------ 137 (169)
++++++|=-|++.|+- ...+++.|++|++++.++ +-++.+...+...+........+..+... ....
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTE--AGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 5678888888665532 234455689999999984 46666666666666555544444333211 0000
Q ss_pred CCCcEEEEcCcCC
Q 030935 138 LNPNIILGADVFY 150 (169)
Q Consensus 138 ~~fDlIi~sd~iy 150 (169)
.+.|++|.+--+.
T Consensus 104 g~iD~lvnnAg~~ 116 (270)
T 3ftp_A 104 GALNVLVNNAGIT 116 (270)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 2789999765544
No 387
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=83.05 E-value=11 Score=28.48 Aligned_cols=43 Identities=19% Similarity=0.241 Sum_probs=27.9
Q ss_pred HHHHHHhccCCCCCCeEEEECCCCCHHHHH----HHHhCCeEEEEcCCC
Q 030935 58 LAEYVWQQRYRFSGANVVELGAGTSLPGLV----AAKVGSNVTLTDDSN 102 (169)
Q Consensus 58 La~~l~~~~~~~~~~~vLElGcGtGl~~l~----~a~~ga~V~~~D~~~ 102 (169)
+..-+.+....+++++++=+|+| | .|.. +++.|++|++++.+.
T Consensus 106 ~~~~L~~~~~~l~~k~vlViGaG-g-~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 106 LLSDLERLSFIRPGLRILLIGAG-G-ASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp HHHHHHHHTCCCTTCEEEEECCS-H-HHHHHHHHHHHTTCEEEEECSSH
T ss_pred HHHHHHhcCcCcCCCEEEEECCc-H-HHHHHHHHHHHcCCEEEEEECCH
Confidence 33334333234578999999996 3 4443 344688999999883
No 388
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=82.69 E-value=3.5 Score=32.49 Aligned_cols=51 Identities=22% Similarity=0.138 Sum_probs=31.9
Q ss_pred HHHHHHh-ccCCCCCCeEEEECCC--CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHH
Q 030935 58 LAEYVWQ-QRYRFSGANVVELGAG--TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNM 110 (169)
Q Consensus 58 La~~l~~-~~~~~~~~~vLElGcG--tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~ 110 (169)
.+.+... .....++++||-.|++ .|...+.+++ .|++|++++.++ +-++.+
T Consensus 157 ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~--~~~~~~ 211 (351)
T 1yb5_A 157 TAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTE--EGQKIV 211 (351)
T ss_dssp HHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH--HHHHHH
T ss_pred HHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh--hHHHHH
Confidence 3333443 3445578899999973 4444444444 688999999884 344443
No 389
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=82.28 E-value=3.8 Score=31.98 Aligned_cols=39 Identities=28% Similarity=0.199 Sum_probs=26.7
Q ss_pred hccCCCCCCeEEEECCCCC-HHHHHHHH-h-CCeEEEEcCCC
Q 030935 64 QQRYRFSGANVVELGAGTS-LPGLVAAK-V-GSNVTLTDDSN 102 (169)
Q Consensus 64 ~~~~~~~~~~vLElGcGtG-l~~l~~a~-~-ga~V~~~D~~~ 102 (169)
+.....+|.+||=+|+|.+ ...+.+++ . |++|+++|.++
T Consensus 157 ~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~ 198 (348)
T 4eez_A 157 KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQ 198 (348)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCH
T ss_pred cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcH
Confidence 3334567889999999843 44444444 4 56999999984
No 390
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=82.25 E-value=7.4 Score=30.14 Aligned_cols=81 Identities=11% Similarity=0.026 Sum_probs=48.7
Q ss_pred CCCCCeEEEECCCCCHHH---HHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCC--cceEEEEEcCCCCc--CCC----
Q 030935 68 RFSGANVVELGAGTSLPG---LVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKL--NCRVMGLTWGFLDA--SIF---- 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~---l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~--~~~~~~l~~~~~~~--~~~---- 136 (169)
.+.+++||=-|++.|+-. ..+++.|++|++++.+ ++-++.+...+...+. .+.+...+..+... ...
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIR--QDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 357889999998877532 3445568999999998 4466666666655554 33333333332111 000
Q ss_pred --CCCCcEEEEcCcCC
Q 030935 137 --DLNPNIILGADVFY 150 (169)
Q Consensus 137 --~~~fDlIi~sd~iy 150 (169)
-.++|++|.+--+.
T Consensus 83 ~~~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVN 98 (319)
T ss_dssp HHTCCEEEEEECCCCC
T ss_pred HhCCCCCEEEECCCcC
Confidence 13679999766554
No 391
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=82.10 E-value=6.7 Score=29.19 Aligned_cols=82 Identities=15% Similarity=0.093 Sum_probs=48.5
Q ss_pred CCCCCeEEEECC-CCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhC-CcceEEEEEcCCCCc--CCC----
Q 030935 68 RFSGANVVELGA-GTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNK-LNCRVMGLTWGFLDA--SIF---- 136 (169)
Q Consensus 68 ~~~~~~vLElGc-GtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~-~~~~~~~l~~~~~~~--~~~---- 136 (169)
.++++++|=.|+ |.|+- ...+++.|++|++++.+. +-++.+.+.++..+ ..+.+...+..+... ...
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE--RRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH--HHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 357889999998 67753 345566799999999984 45555555554332 334444333333211 000
Q ss_pred --CCCCcEEEEcCcCCC
Q 030935 137 --DLNPNIILGADVFYD 151 (169)
Q Consensus 137 --~~~fDlIi~sd~iy~ 151 (169)
-.++|++|.+--+..
T Consensus 97 ~~~g~id~li~~Ag~~~ 113 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGG 113 (266)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHhCCCcEEEECCCcCC
Confidence 027899997765543
No 392
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=81.93 E-value=7.4 Score=29.16 Aligned_cols=82 Identities=18% Similarity=0.115 Sum_probs=47.7
Q ss_pred CCCCCCeEEEECCCCCHHHHHHH----HhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC----
Q 030935 67 YRFSGANVVELGAGTSLPGLVAA----KVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF---- 136 (169)
Q Consensus 67 ~~~~~~~vLElGcGtGl~~l~~a----~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~---- 136 (169)
..+++++||=.|++ |.+|..++ +.|++|++++.++ +-++.+.+.++..+..+.+...+..+... ...
T Consensus 27 ~~l~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 27 KSVTGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINK--HGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp CCCTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCH--HHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHH
Confidence 34678899988865 45555444 4688999999983 45555555555444444444344333211 000
Q ss_pred --CCCCcEEEEcCcCCC
Q 030935 137 --DLNPNIILGADVFYD 151 (169)
Q Consensus 137 --~~~fDlIi~sd~iy~ 151 (169)
-.++|+||.+--+..
T Consensus 104 ~~~g~iD~li~~Ag~~~ 120 (272)
T 1yb1_A 104 AEIGDVSILVNNAGVVY 120 (272)
T ss_dssp HHTCCCSEEEECCCCCC
T ss_pred HHCCCCcEEEECCCcCC
Confidence 126899997665443
No 393
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=81.89 E-value=3.5 Score=31.97 Aligned_cols=45 Identities=13% Similarity=0.008 Sum_probs=29.7
Q ss_pred cCCCCCCeEEEECCC--CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHHH
Q 030935 66 RYRFSGANVVELGAG--TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMRR 112 (169)
Q Consensus 66 ~~~~~~~~vLElGcG--tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~~ 112 (169)
....++++||-.|++ .|...+.+++ .|++|++++.++ +-++.+++
T Consensus 136 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~--~~~~~~~~ 183 (327)
T 1qor_A 136 YEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA--QKAQSALK 183 (327)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH--HHHHHHHH
T ss_pred hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH
Confidence 345578899999943 4444444443 689999999983 45555543
No 394
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=81.76 E-value=4.8 Score=30.47 Aligned_cols=81 Identities=7% Similarity=-0.109 Sum_probs=46.1
Q ss_pred CCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------C
Q 030935 69 FSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------D 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------~ 137 (169)
.+++++|=-|++.|+- ...+++.|++|++++.+ ++-++.+.+.+...+..+.+...+..+... ... -
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD--AKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4678899999766542 23445568999999998 345665555565555554444444333211 000 1
Q ss_pred CCCcEEEEcCcCCC
Q 030935 138 LNPNIILGADVFYD 151 (169)
Q Consensus 138 ~~fDlIi~sd~iy~ 151 (169)
.+.|++|.+--+..
T Consensus 100 g~id~lv~nAg~~~ 113 (279)
T 3sju_A 100 GPIGILVNSAGRNG 113 (279)
T ss_dssp CSCCEEEECCCCCC
T ss_pred CCCcEEEECCCCCC
Confidence 27899997665543
No 395
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=81.62 E-value=5.9 Score=30.22 Aligned_cols=81 Identities=16% Similarity=0.199 Sum_probs=46.9
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------ 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------ 136 (169)
.++++++|=-|++.|+- ...+++.|++|++++.+. ....+.+++.++..+..+.+...+..+... ...
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE-EGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45788999999776642 234455689999999986 234555555455455544444333333211 000
Q ss_pred CCCCcEEEEcCcC
Q 030935 137 DLNPNIILGADVF 149 (169)
Q Consensus 137 ~~~fDlIi~sd~i 149 (169)
-.++|++|.+--+
T Consensus 123 ~g~iD~lvnnAg~ 135 (291)
T 3ijr_A 123 LGSLNILVNNVAQ 135 (291)
T ss_dssp HSSCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 0278999966433
No 396
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=81.58 E-value=1.8 Score=33.29 Aligned_cols=35 Identities=17% Similarity=0.194 Sum_probs=26.5
Q ss_pred CCCCCeEEEECC--CCCHHHHHHHH-hCCeEEEEcCCC
Q 030935 68 RFSGANVVELGA--GTSLPGLVAAK-VGSNVTLTDDSN 102 (169)
Q Consensus 68 ~~~~~~vLElGc--GtGl~~l~~a~-~ga~V~~~D~~~ 102 (169)
..+|++||-.|+ |.|...+.+++ .|++|++++.++
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~ 160 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRP 160 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 557889999997 35555555555 688999999974
No 397
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=81.45 E-value=7.6 Score=30.54 Aligned_cols=40 Identities=18% Similarity=0.191 Sum_probs=27.2
Q ss_pred HHHhccCCCCCCeEEEECCCCCH---HHHHHHHhCC-eEEEEcCC
Q 030935 61 YVWQQRYRFSGANVVELGAGTSL---PGLVAAKVGS-NVTLTDDS 101 (169)
Q Consensus 61 ~l~~~~~~~~~~~vLElGcGtGl---~~l~~a~~ga-~V~~~D~~ 101 (169)
-+.+....++++++|=+|+| |. +...+++.|+ +|+.++.+
T Consensus 144 ~L~~~~~~l~gk~~lVlGaG-G~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 144 ALKEAGHDIIGKKMTICGAG-GAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp HHHHTTCCCTTSEEEEECCS-HHHHHHHHHHHHTTCSEEEEEECS
T ss_pred HHHHcCCCccCCEEEEECCC-hHHHHHHHHHHHCCCCEEEEEECC
Confidence 34443345689999999997 43 2334556788 89988887
No 398
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=81.11 E-value=3.8 Score=30.60 Aligned_cols=80 Identities=16% Similarity=0.090 Sum_probs=46.5
Q ss_pred CCCCCeEEEECCCCCHHHH----HHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC-----
Q 030935 68 RFSGANVVELGAGTSLPGL----VAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF----- 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l----~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~----- 136 (169)
.++++++|=-|++.| +|. .+++.|++|++++.+ ++-++.+...+...+..+.+...+..+... ...
T Consensus 3 ~l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 3 AMKEKVVIITGGSSG-MGKGMATRFAKEGARVVITGRT--KEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDE 79 (257)
T ss_dssp TTTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 357888888887655 444 345568999999998 446666555554444444433333333211 000
Q ss_pred -CCCCcEEEEcCcCC
Q 030935 137 -DLNPNIILGADVFY 150 (169)
Q Consensus 137 -~~~fDlIi~sd~iy 150 (169)
-.+.|++|.+--+.
T Consensus 80 ~~g~id~lv~nAg~~ 94 (257)
T 3imf_A 80 KFGRIDILINNAAGN 94 (257)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 02789999765443
No 399
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=81.08 E-value=7.2 Score=29.41 Aligned_cols=83 Identities=13% Similarity=0.059 Sum_probs=48.4
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------ 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------ 136 (169)
.++++++|=-|++.|+- ...+++.|++|++++... .+..+.+...++..+..+.+...+..+... ...
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA-AERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45789999999876642 234455789999997765 345555555555555544444333332211 000
Q ss_pred CCCCcEEEEcCcCCC
Q 030935 137 DLNPNIILGADVFYD 151 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~ 151 (169)
-.+.|++|.+--+..
T Consensus 107 ~g~iD~lvnnAg~~~ 121 (271)
T 3v2g_A 107 LGGLDILVNSAGIWH 121 (271)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred cCCCcEEEECCCCCC
Confidence 027899997665543
No 400
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=80.93 E-value=8.4 Score=28.45 Aligned_cols=79 Identities=15% Similarity=0.175 Sum_probs=45.5
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC-----
Q 030935 69 FSGANVVELGAGTSLPGLV----AAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD----- 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~----~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~----- 137 (169)
++++++|=.|++.| +|.. +++.|++|++++.+ ++-++.+.+.+...+..+.+...+..+... ....
T Consensus 5 l~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 5 LQGKVALITGASSG-IGEATARALAAEGAAVAIAARR--VEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp TTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56788999997655 4443 34568999999988 345555555555444444433333332211 0000
Q ss_pred -CCCcEEEEcCcCC
Q 030935 138 -LNPNIILGADVFY 150 (169)
Q Consensus 138 -~~fDlIi~sd~iy 150 (169)
.++|++|.+--+.
T Consensus 82 ~g~id~lv~nAg~~ 95 (247)
T 2jah_A 82 LGGLDILVNNAGIM 95 (247)
T ss_dssp HSCCSEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 2789998765443
No 401
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=80.86 E-value=4.2 Score=31.67 Aligned_cols=47 Identities=30% Similarity=0.376 Sum_probs=29.9
Q ss_pred HhccCCCCCCeEEEECCC-CCHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 63 WQQRYRFSGANVVELGAG-TSLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 63 ~~~~~~~~~~~vLElGcG-tGl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
.......+|.+||=.|+| .|..++.+++ .|+ .++++|.++ +-++.++
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~--~k~~~a~ 202 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISS--EKLALAK 202 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCH--HHHHHHH
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechH--HHHHHHH
Confidence 334445678899999986 3444555555 576 578999884 3444444
No 402
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=80.80 E-value=13 Score=28.46 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=24.2
Q ss_pred CCCCCeEEEECCCCCH---HHHHHHHhCC-eEEEEcCCC
Q 030935 68 RFSGANVVELGAGTSL---PGLVAAKVGS-NVTLTDDSN 102 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl---~~l~~a~~ga-~V~~~D~~~ 102 (169)
..+++++|=+|+| |. +...+++.|+ +|+..+.+.
T Consensus 117 ~l~~k~~lvlGaG-g~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 117 PLRNRRVLLLGAG-GAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp CCTTSEEEEECCS-HHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CccCCEEEEECcc-HHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 4578999999997 32 1224455785 899998873
No 403
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=80.75 E-value=4 Score=31.86 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=26.6
Q ss_pred CCCCCeEEEECCC-CCH-HHHHHHHhCC-eEEEEcCCC
Q 030935 68 RFSGANVVELGAG-TSL-PGLVAAKVGS-NVTLTDDSN 102 (169)
Q Consensus 68 ~~~~~~vLElGcG-tGl-~~l~~a~~ga-~V~~~D~~~ 102 (169)
.+++.+||=+||| .|. +...+++.|. +++.+|.+.
T Consensus 33 kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 33 KIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 3467899999998 453 4557777886 899999874
No 404
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=80.37 E-value=4.9 Score=30.93 Aligned_cols=78 Identities=13% Similarity=0.039 Sum_probs=46.1
Q ss_pred CCCCCeEEEECCCCCH---HHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------
Q 030935 68 RFSGANVVELGAGTSL---PGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------ 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl---~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------ 136 (169)
.++||.+|==|++.|+ ++..+++.|++|+++|.++ +.++.+.+. .+.++.....+..+... ...
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~--~~l~~~~~~---~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 100 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRK--DVLDAAIAE---IGGGAVGIQADSANLAELDRLYEKVKAE 100 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHH---HCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH--HHHHHHHHH---cCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999988874 3445566799999999984 455544332 24443333333332211 000
Q ss_pred CCCCcEEEEcCcCC
Q 030935 137 DLNPNIILGADVFY 150 (169)
Q Consensus 137 ~~~fDlIi~sd~iy 150 (169)
-.+.|+++.+-=+.
T Consensus 101 ~G~iDiLVNNAG~~ 114 (273)
T 4fgs_A 101 AGRIDVLFVNAGGG 114 (273)
T ss_dssp HSCEEEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 13789888665444
No 405
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=80.09 E-value=2.2 Score=33.49 Aligned_cols=37 Identities=24% Similarity=0.353 Sum_probs=26.8
Q ss_pred ccCCCCCCeEEEECCC-CCHHHHHHHH-hCC-eEEEEcCCC
Q 030935 65 QRYRFSGANVVELGAG-TSLPGLVAAK-VGS-NVTLTDDSN 102 (169)
Q Consensus 65 ~~~~~~~~~vLElGcG-tGl~~l~~a~-~ga-~V~~~D~~~ 102 (169)
.... +|.+||-+|+| .|+..+.+|+ .|+ +|++++.++
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~ 199 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNP 199 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 4455 88999999985 2444555554 588 899999883
No 406
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=80.03 E-value=2.6 Score=31.90 Aligned_cols=37 Identities=16% Similarity=0.281 Sum_probs=29.7
Q ss_pred cCCCCCCeEEEECCCCCH---HHHHHHHhCCeEEEEcCCC
Q 030935 66 RYRFSGANVVELGAGTSL---PGLVAAKVGSNVTLTDDSN 102 (169)
Q Consensus 66 ~~~~~~~~vLElGcGtGl---~~l~~a~~ga~V~~~D~~~ 102 (169)
.+.|+||++|=-|++.|+ ++..+++.|++|+++|.++
T Consensus 6 ~dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~ 45 (242)
T 4b79_A 6 HDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDA 45 (242)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 356799999999999885 3445667799999999985
No 407
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=80.02 E-value=4.3 Score=31.94 Aligned_cols=52 Identities=13% Similarity=0.046 Sum_probs=32.0
Q ss_pred HHHHHHH-hccCCCCCCeEEEECCC--CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHH
Q 030935 57 ILAEYVW-QQRYRFSGANVVELGAG--TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNM 110 (169)
Q Consensus 57 ~La~~l~-~~~~~~~~~~vLElGcG--tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~ 110 (169)
..|.+.. ......+|++||-.|++ .|...+.+++ .|++|++++.++ +-++.+
T Consensus 148 ~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~--~~~~~~ 203 (354)
T 2j8z_A 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQ--KKLQMA 203 (354)
T ss_dssp HHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCH--HHHHHH
Confidence 3333333 33445578899999853 4444444443 688999999884 455554
No 408
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=79.98 E-value=2.8 Score=31.66 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=23.9
Q ss_pred CCCeEEEECCC-CC-HHHHHHHHhCC-eEEEEcCCC
Q 030935 70 SGANVVELGAG-TS-LPGLVAAKVGS-NVTLTDDSN 102 (169)
Q Consensus 70 ~~~~vLElGcG-tG-l~~l~~a~~ga-~V~~~D~~~ 102 (169)
++++|+=+||| .| .+...+++.|. +++.+|.+.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 46789999998 23 23445566786 899999885
No 409
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=79.75 E-value=6.2 Score=30.60 Aligned_cols=44 Identities=23% Similarity=0.148 Sum_probs=30.4
Q ss_pred cCCCCCCeEEEECC--CCCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 66 RYRFSGANVVELGA--GTSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 66 ~~~~~~~~vLElGc--GtGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
....++++||-.|+ |.|...+.+++ .|++|++++.++ +-++.++
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~--~~~~~~~ 187 (333)
T 1wly_A 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTE--EKAETAR 187 (333)
T ss_dssp SCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSH--HHHHHHH
T ss_pred hCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHH
Confidence 34557889999996 45655554444 688999999984 3455444
No 410
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=79.64 E-value=7.2 Score=29.20 Aligned_cols=81 Identities=14% Similarity=0.142 Sum_probs=47.4
Q ss_pred CCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHH-hCCcceEEEEEcCCCCcC--CC------
Q 030935 69 FSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEM-NKLNCRVMGLTWGFLDAS--IF------ 136 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~-n~~~~~~~~l~~~~~~~~--~~------ 136 (169)
++++++|=-|++.|+- ...+++.|++|++++.+. +-++.+.+.+.. .+..+.+...+..+.... ..
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDV--SELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 5788899888776542 234455689999999984 455555554543 455544444444432210 00
Q ss_pred CCCCcEEEEcCcCCC
Q 030935 137 DLNPNIILGADVFYD 151 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~ 151 (169)
-.+.|++|.+--+..
T Consensus 96 ~g~id~lv~nAg~~~ 110 (266)
T 4egf_A 96 FGGLDVLVNNAGISH 110 (266)
T ss_dssp HTSCSEEEEECCCCC
T ss_pred cCCCCEEEECCCcCC
Confidence 027899997655443
No 411
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=79.62 E-value=15 Score=26.56 Aligned_cols=80 Identities=13% Similarity=0.014 Sum_probs=42.1
Q ss_pred CCCCCeEEEECCCCCHHHHHHHH----hCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEE
Q 030935 68 RFSGANVVELGAGTSLPGLVAAK----VGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNII 143 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~a~----~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlI 143 (169)
.+++++||=.|+ +|.+|..+++ .|.+|++++.++. -++..+ ..+. ..+...+..+...... ..+|+|
T Consensus 18 ~l~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~--~~~~~~----~~~~-~~~~~~Dl~~~~~~~~-~~~D~v 88 (236)
T 3e8x_A 18 YFQGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEE--QGPELR----ERGA-SDIVVANLEEDFSHAF-ASIDAV 88 (236)
T ss_dssp ---CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGG--GHHHHH----HTTC-SEEEECCTTSCCGGGG-TTCSEE
T ss_pred CcCCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChH--HHHHHH----hCCC-ceEEEcccHHHHHHHH-cCCCEE
Confidence 457889998885 5666665544 5889999999853 333221 1222 0333333331111111 278999
Q ss_pred EEcCcCCCCCChH
Q 030935 144 LGADVFYDASGKI 156 (169)
Q Consensus 144 i~sd~iy~~~~~~ 156 (169)
|.+--.......+
T Consensus 89 i~~ag~~~~~~~~ 101 (236)
T 3e8x_A 89 VFAAGSGPHTGAD 101 (236)
T ss_dssp EECCCCCTTSCHH
T ss_pred EECCCCCCCCCcc
Confidence 9766555444433
No 412
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=79.58 E-value=8 Score=28.68 Aligned_cols=79 Identities=11% Similarity=0.111 Sum_probs=44.4
Q ss_pred CCCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC----
Q 030935 68 RFSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD---- 137 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~---- 137 (169)
.++++++|=.|++.| +|..+ ++.|++|++++.++ +-++.+.+.+...+..+.....+..+... ....
T Consensus 11 ~l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 11 PLENKVALVTASTDG-IGLAIARRLAQDGAHVVVSSRKQ--ENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN 87 (260)
T ss_dssp TTTTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 457888888886544 45444 44688999999884 34554444454444444333333332111 0011
Q ss_pred --CCCcEEEEcCcC
Q 030935 138 --LNPNIILGADVF 149 (169)
Q Consensus 138 --~~fDlIi~sd~i 149 (169)
.++|++|.+--+
T Consensus 88 ~~g~iD~lv~~Ag~ 101 (260)
T 2zat_A 88 LHGGVDILVSNAAV 101 (260)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 278999866543
No 413
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=79.38 E-value=8.1 Score=28.89 Aligned_cols=79 Identities=14% Similarity=0.146 Sum_probs=47.7
Q ss_pred CCCCCeEEEECCCC--CH---HHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHh-CCcceEEEEEcCCCCc--CCC---
Q 030935 68 RFSGANVVELGAGT--SL---PGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMN-KLNCRVMGLTWGFLDA--SIF--- 136 (169)
Q Consensus 68 ~~~~~~vLElGcGt--Gl---~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n-~~~~~~~~l~~~~~~~--~~~--- 136 (169)
.++||++|=-|+++ |+ ++..+++.|++|++++.++. .++.+.+-++.. +..+.....+..+... ...
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKER--SRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGG--GHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHH--HHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence 46899999999643 53 34556678999999999853 566555555443 3344444444333211 000
Q ss_pred ---CCCCcEEEEcCc
Q 030935 137 ---DLNPNIILGADV 148 (169)
Q Consensus 137 ---~~~fDlIi~sd~ 148 (169)
-.+.|+++.+--
T Consensus 81 ~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 81 GKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHCCCSEEEECCC
T ss_pred HHHhCCCCEEEeccc
Confidence 137899886543
No 414
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=79.37 E-value=8.3 Score=29.04 Aligned_cols=85 Identities=14% Similarity=0.039 Sum_probs=49.5
Q ss_pred CCCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCC-----------cHHHHHHHHHHHHHhCCcceEEEEEcCCCC
Q 030935 67 YRFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSN-----------RIEVLKNMRRVCEMNKLNCRVMGLTWGFLD 132 (169)
Q Consensus 67 ~~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~-----------~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~ 132 (169)
..++++++|=-|++.|+- ...+++.|++|+++|.+. +++-++.+.+.+...+..+.+...+..+..
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA 90 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 346789999999876642 234455799999998731 144566555555555555444444433321
Q ss_pred c--CCC------CCCCcEEEEcCcCCC
Q 030935 133 A--SIF------DLNPNIILGADVFYD 151 (169)
Q Consensus 133 ~--~~~------~~~fDlIi~sd~iy~ 151 (169)
. ... -.+.|++|.+--+..
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 1 000 127899997665543
No 415
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=78.81 E-value=6.8 Score=29.78 Aligned_cols=79 Identities=10% Similarity=-0.013 Sum_probs=45.6
Q ss_pred CCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------C
Q 030935 69 FSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------D 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------~ 137 (169)
++++++|=-|++.|+- ...+++.|++|++++.+. +-++.+...+...+..+.+...+..+... ... -
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTR--TEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4678899899776642 234455689999999983 45655555554444444444343333211 000 0
Q ss_pred CCCcEEEEcCcC
Q 030935 138 LNPNIILGADVF 149 (169)
Q Consensus 138 ~~fDlIi~sd~i 149 (169)
.++|++|.+--+
T Consensus 104 g~iD~lVnnAg~ 115 (283)
T 3v8b_A 104 GHLDIVVANAGI 115 (283)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 278999976544
No 416
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=78.64 E-value=5.3 Score=31.55 Aligned_cols=43 Identities=23% Similarity=0.132 Sum_probs=30.9
Q ss_pred CCCCCCeEEEECC--CCCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 67 YRFSGANVVELGA--GTSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 67 ~~~~~~~vLElGc--GtGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
...+|++||=.|+ |.|...+.+++ .|++|++++.++ +-++.++
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~--~~~~~~~ 205 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD--EKSAFLK 205 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSH--HHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCH--HHHHHHH
Confidence 4557889999993 36777776665 688999999983 3555544
No 417
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=78.54 E-value=20 Score=27.46 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=26.3
Q ss_pred HHhccCCCCCCeEEEECCCCCH---HHHHHHHhCC-eEEEEcCCC
Q 030935 62 VWQQRYRFSGANVVELGAGTSL---PGLVAAKVGS-NVTLTDDSN 102 (169)
Q Consensus 62 l~~~~~~~~~~~vLElGcGtGl---~~l~~a~~ga-~V~~~D~~~ 102 (169)
+.......+++++|=+|+| |. +...+++.|+ +|+..+.+.
T Consensus 117 L~~~~~~l~~k~vlvlGaG-g~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 117 LLAQQVLLKGATILLIGAG-GAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp HHHTTCCCTTCEEEEECCS-HHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred HHHhCCCccCCEEEEECch-HHHHHHHHHHHhcCCCeEEEEECCH
Confidence 3333334678999999997 32 2223455685 899998884
No 418
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=78.30 E-value=9.3 Score=27.94 Aligned_cols=81 Identities=15% Similarity=0.094 Sum_probs=47.6
Q ss_pred CCCCCCeEEEECCCCCHHHHH----HHHhCCeEEEEcCCCcHHHHHHHHHHHHHhC-CcceEEEEEcCCCCc-C---CC-
Q 030935 67 YRFSGANVVELGAGTSLPGLV----AAKVGSNVTLTDDSNRIEVLKNMRRVCEMNK-LNCRVMGLTWGFLDA-S---IF- 136 (169)
Q Consensus 67 ~~~~~~~vLElGcGtGl~~l~----~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~-~~~~~~~l~~~~~~~-~---~~- 136 (169)
..++++++|=.|++.| +|.. +++.|++|++++.++ +-++.+.+.++..+ ....+...+...... . ..
T Consensus 10 ~~l~~k~vlITGas~g-IG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~ 86 (247)
T 3i1j_A 10 ELLKGRVILVTGAARG-IGAAAARAYAAHGASVVLLGRTE--ASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAA 86 (247)
T ss_dssp TTTTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEecCH--HHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHH
Confidence 4567889998887655 4443 445689999999984 46666666565544 334444343321111 0 00
Q ss_pred -----CCCCcEEEEcCcCC
Q 030935 137 -----DLNPNIILGADVFY 150 (169)
Q Consensus 137 -----~~~fDlIi~sd~iy 150 (169)
-.++|++|.+--+.
T Consensus 87 ~~~~~~g~id~lv~nAg~~ 105 (247)
T 3i1j_A 87 RVEHEFGRLDGLLHNASII 105 (247)
T ss_dssp HHHHHHSCCSEEEECCCCC
T ss_pred HHHHhCCCCCEEEECCccC
Confidence 02789999766543
No 419
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=78.21 E-value=9.7 Score=28.66 Aligned_cols=79 Identities=11% Similarity=0.023 Sum_probs=45.3
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------ 136 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------ 136 (169)
++++++|=.|++.| +|..+ ++.|++|++++.++ +-++.+.+.+...+..+.+...+..+... ...
T Consensus 20 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 20 QDSEVALVTGATSG-IGLEIARRLGKEGLRVFVCARGE--EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER 96 (277)
T ss_dssp TTSCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 46788999997654 44443 44688999999984 45555545554444444433333332211 000
Q ss_pred CCCCcEEEEcCcCC
Q 030935 137 DLNPNIILGADVFY 150 (169)
Q Consensus 137 ~~~fDlIi~sd~iy 150 (169)
-.++|++|.+--+.
T Consensus 97 ~g~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 97 YGPVDVLVNNAGRP 110 (277)
T ss_dssp TCSCSEEEECCCCC
T ss_pred hCCCCEEEECCCCC
Confidence 12689998765443
No 420
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=78.04 E-value=6.3 Score=29.85 Aligned_cols=82 Identities=16% Similarity=0.125 Sum_probs=49.3
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC-----
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD----- 137 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~----- 137 (169)
.++++++|=-|++.|+- ...+++.|++|++++.++. .++.+.+.+...+..+.+...+..+... ....
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSD--ALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGG--GGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45788999999876542 2344556899999999853 5555555565555555444444333211 0011
Q ss_pred -CCCcEEEEcCcCCC
Q 030935 138 -LNPNIILGADVFYD 151 (169)
Q Consensus 138 -~~fDlIi~sd~iy~ 151 (169)
.++|++|.+--+..
T Consensus 107 ~g~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 107 LGGIDIAVCNAGIVS 121 (276)
T ss_dssp HSCCSEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 27899997665543
No 421
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=77.92 E-value=11 Score=28.81 Aligned_cols=83 Identities=17% Similarity=0.147 Sum_probs=48.2
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCC----------cHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSN----------RIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA- 133 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~----------~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~- 133 (169)
.++++++|=-|++.|+- +..+++.|++|+++|.++ .++-++.+...++..+..+.+...+..+...
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 45788999999877642 334456799999999762 1334555555555555554444444333211
Q ss_pred -CCCC------CCCcEEEEcCcCC
Q 030935 134 -SIFD------LNPNIILGADVFY 150 (169)
Q Consensus 134 -~~~~------~~fDlIi~sd~iy 150 (169)
.... .+.|++|.+--+.
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCC
Confidence 0011 3789998665443
No 422
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=77.87 E-value=5.6 Score=32.55 Aligned_cols=43 Identities=26% Similarity=0.086 Sum_probs=30.0
Q ss_pred CCCCCCeEEEECC-C-CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 67 YRFSGANVVELGA-G-TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 67 ~~~~~~~vLElGc-G-tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
...+|.+||=+|+ | .|+.++.+|+ .|++|++++.+ ++-++.++
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~--~~~~~~~~ 270 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSS--PQKAEICR 270 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--HHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECC--HHHHHHHH
Confidence 4567889999997 3 5666666665 58899999876 34555554
No 423
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=77.84 E-value=4.2 Score=38.36 Aligned_cols=42 Identities=7% Similarity=-0.054 Sum_probs=33.9
Q ss_pred CCeEEEECCCCCHHHHHHHHhCC--eEEEEcCCCcHHHHHHHHHHH
Q 030935 71 GANVVELGAGTSLPGLVAAKVGS--NVTLTDDSNRIEVLKNMRRVC 114 (169)
Q Consensus 71 ~~~vLElGcGtGl~~l~~a~~ga--~V~~~D~~~~~~~l~~~~~n~ 114 (169)
..+++||.||.|.+++.+.+.|. .|.++|+++ .+++.-+.|.
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~--~A~~ty~~N~ 894 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWD--PAAQAFRLNN 894 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSH--HHHHHHHHHC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCH--HHHHHHHHhC
Confidence 34799999999999999999996 478999994 4666666553
No 424
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=77.75 E-value=11 Score=27.58 Aligned_cols=79 Identities=13% Similarity=0.025 Sum_probs=44.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHH----hCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC-----
Q 030935 69 FSGANVVELGAGTSLPGLVAAK----VGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD----- 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~----~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~----- 137 (169)
+++++||=.|+ +|.+|..+++ .|++|++++.++ +-++...+.++..+..+.+...+..+... ....
T Consensus 9 ~~~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 9 LDGKCAIITGA-GAGIGKEIAITFATAGASVVVSDINA--DAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp CTTCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCH--HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCH--HHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 46788888885 5666665544 588999999984 45555555555444444333333332111 0011
Q ss_pred -CCCcEEEEcCcCC
Q 030935 138 -LNPNIILGADVFY 150 (169)
Q Consensus 138 -~~fDlIi~sd~iy 150 (169)
.++|+||.+--+.
T Consensus 86 ~~~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 86 LGKVDILVNNAGGG 99 (255)
T ss_dssp HSSCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 2789998665443
No 425
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=77.74 E-value=6 Score=30.22 Aligned_cols=81 Identities=12% Similarity=0.037 Sum_probs=46.5
Q ss_pred CCCCCeEEEECCCCCHHHH----HHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC-----
Q 030935 68 RFSGANVVELGAGTSLPGL----VAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF----- 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l----~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~----- 136 (169)
.++++++|=-|++.| +|. .+++.|++|++++.+...+..+.++..++..+..+.+...+..+... ...
T Consensus 46 ~l~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 46 RLKDRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 457889999997655 343 34556899999998743344555555555555444333233222110 000
Q ss_pred -CCCCcEEEEcCcC
Q 030935 137 -DLNPNIILGADVF 149 (169)
Q Consensus 137 -~~~fDlIi~sd~i 149 (169)
-.+.|++|.+--+
T Consensus 125 ~~g~iD~lv~nAg~ 138 (294)
T 3r3s_A 125 ALGGLDILALVAGK 138 (294)
T ss_dssp HHTCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 1378999876654
No 426
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=77.51 E-value=11 Score=28.29 Aligned_cols=79 Identities=16% Similarity=0.171 Sum_probs=45.7
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CC-------
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SI------- 135 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~------- 135 (169)
++++++|=.|++.| +|..+ ++.|++|++++.++ +-++.+.+.+...+..+.+...+..+... ..
T Consensus 19 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 19 LKGTTALVTGGSKG-IGYAIVEELAGLGARVYTCSRNE--KELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp CTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcch-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 57889999997654 44433 44689999999984 45555544454444444433333332211 00
Q ss_pred CCCCCcEEEEcCcCC
Q 030935 136 FDLNPNIILGADVFY 150 (169)
Q Consensus 136 ~~~~fDlIi~sd~iy 150 (169)
...++|++|.+--+.
T Consensus 96 ~~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 96 FDGKLNILVNNAGVV 110 (273)
T ss_dssp TTSCCCEEEECCCCC
T ss_pred cCCCCcEEEECCCCC
Confidence 114789999765443
No 427
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=77.35 E-value=12 Score=28.03 Aligned_cols=83 Identities=12% Similarity=0.045 Sum_probs=47.9
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCC----------cHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSN----------RIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA- 133 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~----------~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~- 133 (169)
.++++++|=-|++.|+- ...+++.|++|+++|.++ .++-++.....+...+..+.+...+..+...
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 45788999999766532 234455799999999862 1344555545455555554444444333211
Q ss_pred -CCCC------CCCcEEEEcCcCC
Q 030935 134 -SIFD------LNPNIILGADVFY 150 (169)
Q Consensus 134 -~~~~------~~fDlIi~sd~iy 150 (169)
.... .+.|++|.+--+.
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 0011 2789999766544
No 428
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=77.19 E-value=5.9 Score=30.00 Aligned_cols=81 Identities=10% Similarity=0.024 Sum_probs=47.4
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcC--CC-----C
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDAS--IF-----D 137 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~--~~-----~ 137 (169)
.++++++|=-|++.|+- ...+++.|++|++++.++. -++.+...+...+..+.....+..+.... .. .
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPG--STAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI 107 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTT--TTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH--HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence 35788999888765532 2344556899999999853 45555555555555544444443332110 00 0
Q ss_pred CCCcEEEEcCcCC
Q 030935 138 LNPNIILGADVFY 150 (169)
Q Consensus 138 ~~fDlIi~sd~iy 150 (169)
.++|++|.+--+.
T Consensus 108 g~iD~lvnnAg~~ 120 (275)
T 4imr_A 108 APVDILVINASAQ 120 (275)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3789999766554
No 429
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=77.17 E-value=9.1 Score=28.50 Aligned_cols=79 Identities=18% Similarity=0.143 Sum_probs=45.0
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEE-cCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC----
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLT-DDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD---- 137 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~-D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~---- 137 (169)
.++++++|=-|++.|+- ...+++.|++|+++ +.+. +..+.+...++..+..+.+...+..+... ....
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAA--EGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSC--HHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 35788999999876642 23445579999988 5553 35555555555445444444444333211 0000
Q ss_pred --CCCcEEEEcCc
Q 030935 138 --LNPNIILGADV 148 (169)
Q Consensus 138 --~~fDlIi~sd~ 148 (169)
.+.|+++.+--
T Consensus 83 ~~g~id~lv~nAg 95 (259)
T 3edm_A 83 KFGEIHGLVHVAG 95 (259)
T ss_dssp HHCSEEEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 26899986553
No 430
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=77.09 E-value=9.6 Score=28.34 Aligned_cols=78 Identities=19% Similarity=0.233 Sum_probs=44.6
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------
Q 030935 69 FSGANVVELGAGTSLPGLV----AAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------ 136 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~----~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------ 136 (169)
++++++|=.|++.| +|.. +++.|++|++++.++ +-++.+...+...+..+.+...+..+... ...
T Consensus 5 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 5 FNGKVCLVTGAGGN-IGLATALRLAEEGTAIALLDMNR--EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 46788998887655 4443 345689999999883 45555555454444444333333332211 000
Q ss_pred CCCCcEEEEcCcC
Q 030935 137 DLNPNIILGADVF 149 (169)
Q Consensus 137 ~~~fDlIi~sd~i 149 (169)
-.++|++|.+--+
T Consensus 82 ~g~id~lv~nAg~ 94 (262)
T 1zem_A 82 FGKIDFLFNNAGY 94 (262)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 0268999976544
No 431
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=77.05 E-value=11 Score=27.90 Aligned_cols=79 Identities=13% Similarity=0.149 Sum_probs=45.2
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CC-------
Q 030935 69 FSGANVVELGAGTSLPGLV----AAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SI------- 135 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~----~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~------- 135 (169)
++++++|=-|++.| +|.. +++.|++|++++.++ +-++.+...+...+..+.+...+..+... ..
T Consensus 7 l~~k~vlVTGas~g-iG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 7 LEGCTALVTGGSRG-IGYGIVEELASLGASVYTCSRNQ--KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp CTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46888998887554 4443 345689999999884 45555444454444444333333332211 00
Q ss_pred CCCCCcEEEEcCcCC
Q 030935 136 FDLNPNIILGADVFY 150 (169)
Q Consensus 136 ~~~~fDlIi~sd~iy 150 (169)
...++|++|.+--+.
T Consensus 84 ~~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 84 FHGKLNILVNNAGIV 98 (260)
T ss_dssp TTTCCCEEEECCCCC
T ss_pred cCCCCCEEEECCCCC
Confidence 014789999765543
No 432
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=77.00 E-value=12 Score=28.13 Aligned_cols=85 Identities=15% Similarity=0.128 Sum_probs=49.0
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCC-----------cHHHHHHHHHHHHHhCCcceEEEEEcCCCCc
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSN-----------RIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA 133 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~-----------~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~ 133 (169)
.++++++|=-|++.|+- ...+++.|++|+++|.+. +++-++.+.+.+...+..+.+...+..+...
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 35788999999876642 234455799999998731 1345555555555555544444444333211
Q ss_pred --CCCC------CCCcEEEEcCcCCCC
Q 030935 134 --SIFD------LNPNIILGADVFYDA 152 (169)
Q Consensus 134 --~~~~------~~fDlIi~sd~iy~~ 152 (169)
.... .+.|++|.+--+...
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~~~ 114 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVAAP 114 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 0000 368999976655443
No 433
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=76.97 E-value=5.4 Score=30.16 Aligned_cols=82 Identities=9% Similarity=0.095 Sum_probs=47.3
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------ 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------ 136 (169)
.++++++|=-|++.|+- ...+++.|++|++++.+ ++-++.+.+.+...+..+.+...+..+... ...
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTD--PSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC--HHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35788999888765532 23445568999999998 445665555565555444333333322111 000
Q ss_pred CCCCcEEEEcCcCCC
Q 030935 137 DLNPNIILGADVFYD 151 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~ 151 (169)
-.+.|++|.+--+..
T Consensus 101 ~g~iD~lv~nAg~~~ 115 (271)
T 4ibo_A 101 GIDVDILVNNAGIQF 115 (271)
T ss_dssp TCCCCEEEECCCCCC
T ss_pred CCCCCEEEECCCCCC
Confidence 126899997665543
No 434
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=76.79 E-value=9.1 Score=28.84 Aligned_cols=81 Identities=10% Similarity=0.065 Sum_probs=45.4
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHH-HHhCCcceEEEEEcCCCCc--CCC-----
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVC-EMNKLNCRVMGLTWGFLDA--SIF----- 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~-~~n~~~~~~~~l~~~~~~~--~~~----- 136 (169)
.++++++|=-|++.|+- ...+++.|++|++++.+. +-++.+...+ ...+..+.+...+..+... ...
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSL--PRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCH--HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999776542 223445688999999984 3443333333 3344444444444333211 000
Q ss_pred -CCCCcEEEEcCcCC
Q 030935 137 -DLNPNIILGADVFY 150 (169)
Q Consensus 137 -~~~fDlIi~sd~iy 150 (169)
-.+.|++|.+--+.
T Consensus 102 ~~g~id~lv~nAg~~ 116 (277)
T 4fc7_A 102 EFGRIDILINCAAGN 116 (277)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCcCC
Confidence 02789999765443
No 435
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=76.67 E-value=9.1 Score=28.87 Aligned_cols=81 Identities=12% Similarity=0.145 Sum_probs=45.3
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC-----C
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF-----D 137 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~-----~ 137 (169)
.++++++|=-|++.|+- ...+++.|++|++++.++ -.+.....+...+..+.+...+..+... ... .
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD---GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT 104 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST---HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH---HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence 45788999999876642 334455799999999553 3333333344444444444333333211 000 1
Q ss_pred CCCcEEEEcCcCCC
Q 030935 138 LNPNIILGADVFYD 151 (169)
Q Consensus 138 ~~fDlIi~sd~iy~ 151 (169)
.++|++|.+--+..
T Consensus 105 g~iD~lv~nAg~~~ 118 (273)
T 3uf0_A 105 RRVDVLVNNAGIIA 118 (273)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCcEEEECCCCCC
Confidence 37899997665543
No 436
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=76.57 E-value=6.4 Score=32.00 Aligned_cols=44 Identities=20% Similarity=0.080 Sum_probs=29.5
Q ss_pred cCCCCCCeEEEECC-C-CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHH
Q 030935 66 RYRFSGANVVELGA-G-TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 66 ~~~~~~~~vLElGc-G-tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~ 111 (169)
....+|++||=.|+ | .|+..+.+++ .|++|++++.+ ++-++.++
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~--~~~~~~~~ 262 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSS--AQKEAAVR 262 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--HHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHH
Confidence 44567889999997 3 4555555555 58899999877 34555443
No 437
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=76.54 E-value=10 Score=28.51 Aligned_cols=82 Identities=10% Similarity=0.076 Sum_probs=48.3
Q ss_pred CCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC------
Q 030935 69 FSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD------ 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~------ 137 (169)
++++++|=-|++.|+- ...+++.|++|++++... .+.++.+.+.++..+..+.+...+..+... ....
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASS-AGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCC-hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5788899888766542 234455799999998854 345666655565555554444444333211 0000
Q ss_pred CCCcEEEEcCcCCC
Q 030935 138 LNPNIILGADVFYD 151 (169)
Q Consensus 138 ~~fDlIi~sd~iy~ 151 (169)
.+.|++|.+--+..
T Consensus 105 g~id~lv~nAg~~~ 118 (269)
T 4dmm_A 105 GRLDVLVNNAGITR 118 (269)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 27899997665543
No 438
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=76.19 E-value=4.5 Score=30.77 Aligned_cols=81 Identities=14% Similarity=0.148 Sum_probs=45.8
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC-----
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD----- 137 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~----- 137 (169)
.++++++|=-|++.|+- ...+++.|++|++++.++ +-++.+...+...+..+.+...+..+... ....
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNG--NALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCH--HHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35788899888776642 234455789999999984 45655555554444433332222222110 0000
Q ss_pred -CCCcEEEEcCcCC
Q 030935 138 -LNPNIILGADVFY 150 (169)
Q Consensus 138 -~~fDlIi~sd~iy 150 (169)
.++|++|.+--+.
T Consensus 83 ~g~iD~lvnnAg~~ 96 (280)
T 3tox_A 83 FGGLDTAFNNAGAL 96 (280)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 2789999765443
No 439
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=76.07 E-value=12 Score=27.75 Aligned_cols=79 Identities=15% Similarity=0.080 Sum_probs=44.6
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCeEEEEcCCCcHHHHHHHHHHHHHh--CCcceEEEEEcCCCCc--CCCC---
Q 030935 69 FSGANVVELGAGTSLPGLV----AAKVGSNVTLTDDSNRIEVLKNMRRVCEMN--KLNCRVMGLTWGFLDA--SIFD--- 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~----~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n--~~~~~~~~l~~~~~~~--~~~~--- 137 (169)
++++++|=.|++.| +|.. +++.|++|++++.++ +-++.+.+.+... +..+.+...+..+... ....
T Consensus 11 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 11 FTDRVVLITGGGSG-LGRATAVRLAAEGAKLSLVDVSS--EGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT 87 (267)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 57889999997655 4443 345689999999984 4555544444433 3333333333332211 0011
Q ss_pred ---CCCcEEEEcCcCC
Q 030935 138 ---LNPNIILGADVFY 150 (169)
Q Consensus 138 ---~~fDlIi~sd~iy 150 (169)
.++|++|.+--+.
T Consensus 88 ~~~g~id~lv~nAg~~ 103 (267)
T 1iy8_A 88 ERFGRIDGFFNNAGIE 103 (267)
T ss_dssp HHHSCCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCcC
Confidence 2689999765443
No 440
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=75.98 E-value=26 Score=27.76 Aligned_cols=32 Identities=31% Similarity=0.482 Sum_probs=23.0
Q ss_pred CCCeEEEECCC-CC-HHHHHHHHhCC-eEEEEcCC
Q 030935 70 SGANVVELGAG-TS-LPGLVAAKVGS-NVTLTDDS 101 (169)
Q Consensus 70 ~~~~vLElGcG-tG-l~~l~~a~~ga-~V~~~D~~ 101 (169)
++++||=+||| .| -+...++..|. +++.+|.+
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 46799999997 33 23445666776 89999876
No 441
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=75.95 E-value=14 Score=27.66 Aligned_cols=80 Identities=11% Similarity=0.131 Sum_probs=44.8
Q ss_pred CCCCCeEEEECCCCCHHHHH----HHHhCCeEEEEcCCCcHHHHHHHHHHH-HHhCCcceEEEEEcCCCCc--CCCC---
Q 030935 68 RFSGANVVELGAGTSLPGLV----AAKVGSNVTLTDDSNRIEVLKNMRRVC-EMNKLNCRVMGLTWGFLDA--SIFD--- 137 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~----~a~~ga~V~~~D~~~~~~~l~~~~~n~-~~n~~~~~~~~l~~~~~~~--~~~~--- 137 (169)
.++++++|=.|++.| +|.. +++.|++|++++.++ +-++.+...+ ...+..+.+...+..+... ....
T Consensus 18 ~l~~k~~lVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 18 DLRGRVALVTGGSRG-LGFGIAQGLAEAGCSVVVASRNL--EEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK 94 (267)
T ss_dssp CCTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 457888998887654 4443 345688999999883 3454444444 3334444333333332211 0000
Q ss_pred ---CCCcEEEEcCcCC
Q 030935 138 ---LNPNIILGADVFY 150 (169)
Q Consensus 138 ---~~fDlIi~sd~iy 150 (169)
.++|++|.+--+.
T Consensus 95 ~~~g~iD~lvnnAg~~ 110 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGIN 110 (267)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCcC
Confidence 2689999765444
No 442
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=75.86 E-value=13 Score=27.28 Aligned_cols=78 Identities=12% Similarity=0.138 Sum_probs=44.1
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC-----
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD----- 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~----- 137 (169)
+++++||=.|++ |.+|..+ ++.|++|++++.++ +-++.+.+.++..+.++.+...+..+... ....
T Consensus 11 l~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 11 LDNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDE--AMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 467889988865 5555544 44688999999884 34544444454444444443333332111 0011
Q ss_pred -CCCcEEEEcCcC
Q 030935 138 -LNPNIILGADVF 149 (169)
Q Consensus 138 -~~fDlIi~sd~i 149 (169)
.++|+||.+--+
T Consensus 88 ~~~id~vi~~Ag~ 100 (260)
T 3awd_A 88 EGRVDILVACAGI 100 (260)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 268999865443
No 443
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=75.77 E-value=10 Score=28.14 Aligned_cols=76 Identities=14% Similarity=0.134 Sum_probs=43.3
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc------CCC--
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA------SIF-- 136 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~------~~~-- 136 (169)
++++++|=-|++.| +|..+ ++.|++|++++.++ +-++.+...+...+..+.+...+..+... ...
T Consensus 3 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 3 MNGQVCVVTGASRG-IGRGIALQLCKAGATVYITGRHL--DTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDRE 79 (260)
T ss_dssp TTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 46778888886554 45444 44689999999883 45555544454444444433333333211 000
Q ss_pred -CCCCcEEEEcC
Q 030935 137 -DLNPNIILGAD 147 (169)
Q Consensus 137 -~~~fDlIi~sd 147 (169)
-.++|++|.+-
T Consensus 80 ~~g~id~lvnnA 91 (260)
T 2qq5_A 80 QQGRLDVLVNNA 91 (260)
T ss_dssp HTTCCCEEEECC
T ss_pred cCCCceEEEECC
Confidence 23689999765
No 444
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=75.65 E-value=2.7 Score=33.20 Aligned_cols=31 Identities=16% Similarity=0.206 Sum_probs=23.3
Q ss_pred CeEEEECCC-CCHHH-HHHH-H-hCCe-EEEEcCCC
Q 030935 72 ANVVELGAG-TSLPG-LVAA-K-VGSN-VTLTDDSN 102 (169)
Q Consensus 72 ~~vLElGcG-tGl~~-l~~a-~-~ga~-V~~~D~~~ 102 (169)
.+||=+|+| .|+.. +.+| + .|++ |++++.++
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~ 209 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRD 209 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCc
Confidence 899999985 35555 5555 4 5776 99999985
No 445
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=75.46 E-value=10 Score=28.54 Aligned_cols=82 Identities=10% Similarity=0.022 Sum_probs=46.2
Q ss_pred CCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC------
Q 030935 69 FSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD------ 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~------ 137 (169)
.+++++|=-|++.|+- +..+++.|++|++++... .+..+.+.+.+...+..+.+...+..+... ....
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGK-AAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSC-SHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3678899999876642 334556799998885543 245555555555555554444444433211 0000
Q ss_pred CCCcEEEEcCcCCC
Q 030935 138 LNPNIILGADVFYD 151 (169)
Q Consensus 138 ~~fDlIi~sd~iy~ 151 (169)
.+.|++|.+--+..
T Consensus 104 g~iD~lvnnAG~~~ 117 (267)
T 3u5t_A 104 GGVDVLVNNAGIMP 117 (267)
T ss_dssp SCEEEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 27899997665543
No 446
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=75.40 E-value=6.4 Score=29.89 Aligned_cols=80 Identities=19% Similarity=0.131 Sum_probs=42.7
Q ss_pred CCCCCeEEEECCCCCHHHHH----HHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcc-eEEEEEcCCCCc--CCC----
Q 030935 68 RFSGANVVELGAGTSLPGLV----AAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNC-RVMGLTWGFLDA--SIF---- 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l~----~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~-~~~~l~~~~~~~--~~~---- 136 (169)
.++++++|=-|++.| +|.. +++.|++|++++.++ +.++.+...+...+... .+...+..+... ...
T Consensus 30 ~l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (281)
T 4dry_A 30 SGEGRIALVTGGGTG-VGRGIAQALSAEGYSVVITGRRP--DVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVR 106 (281)
T ss_dssp ----CEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 357888998887655 4443 445689999999984 45555554444333222 333333333211 000
Q ss_pred --CCCCcEEEEcCcCC
Q 030935 137 --DLNPNIILGADVFY 150 (169)
Q Consensus 137 --~~~fDlIi~sd~iy 150 (169)
-.++|++|.+--+.
T Consensus 107 ~~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 107 AEFARLDLLVNNAGSN 122 (281)
T ss_dssp HHHSCCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 03789999765443
No 447
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=75.26 E-value=9.7 Score=28.52 Aligned_cols=83 Identities=12% Similarity=0.057 Sum_probs=47.7
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCC----------cHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSN----------RIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA- 133 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~----------~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~- 133 (169)
.++++++|=-|++.|+- ...+++.|++|+++|.+. ..+-++.+...+...+..+.+...+..+...
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 45788999999876642 234455689999999861 1234555555555555554444444333211
Q ss_pred -CCCC------CCCcEEEEcCcCC
Q 030935 134 -SIFD------LNPNIILGADVFY 150 (169)
Q Consensus 134 -~~~~------~~fDlIi~sd~iy 150 (169)
.... .++|++|.+--+.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~ 110 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGIC 110 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcC
Confidence 0000 2789999765544
No 448
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=75.14 E-value=24 Score=26.60 Aligned_cols=44 Identities=18% Similarity=0.188 Sum_probs=28.6
Q ss_pred HHHHHHHhccCCCCCCeEEEECCCCCHHHH----HHHHhCCeEEEEcCCC
Q 030935 57 ILAEYVWQQRYRFSGANVVELGAGTSLPGL----VAAKVGSNVTLTDDSN 102 (169)
Q Consensus 57 ~La~~l~~~~~~~~~~~vLElGcGtGl~~l----~~a~~ga~V~~~D~~~ 102 (169)
-+..-+.+.....++++++=+|+| | .|. .+++.|++|++.+.+.
T Consensus 105 G~~~~L~~~~~~~~~~~vlvlGaG-g-~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 105 GLVTDLQRLNWLRPNQHVLILGAG-G-ATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp HHHHHHHHTTCCCTTCEEEEECCS-H-HHHTTHHHHHHTTCEEEEEESSH
T ss_pred HHHHHHHHhCCCcCCCEEEEECCc-H-HHHHHHHHHHHCCCEEEEEECCH
Confidence 333344443334578899999996 2 333 4455688999999883
No 449
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=75.06 E-value=5.6 Score=31.38 Aligned_cols=42 Identities=19% Similarity=0.152 Sum_probs=30.3
Q ss_pred CeEEEECCCCC--HHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHH
Q 030935 72 ANVVELGAGTS--LPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCE 115 (169)
Q Consensus 72 ~~vLElGcGtG--l~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~ 115 (169)
.+|-=||||+= .++..+|..|.+|++.|.+ ++.++.++.+++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~--~~~l~~~~~~i~ 50 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE--PRQITGALENIR 50 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC--HHHHHHHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECC--HHHHHHHHHHHH
Confidence 57888999842 3445567788999999999 557766665554
No 450
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=74.89 E-value=13 Score=28.26 Aligned_cols=79 Identities=15% Similarity=0.139 Sum_probs=45.7
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------ 136 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------ 136 (169)
++++++|=.|++.| +|..+ ++.|++|++++.++ +-++.+.+.+...+..+.+...+..+... ...
T Consensus 32 l~~k~vlVTGas~g-IG~aia~~L~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 108 (291)
T 3cxt_A 32 LKGKIALVTGASYG-IGFAIASAYAKAGATIVFNDINQ--ELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESE 108 (291)
T ss_dssp CTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 57888998887654 44443 44688999999883 45555545454444444444444333211 000
Q ss_pred CCCCcEEEEcCcCC
Q 030935 137 DLNPNIILGADVFY 150 (169)
Q Consensus 137 ~~~fDlIi~sd~iy 150 (169)
-.++|++|.+--+.
T Consensus 109 ~g~iD~lvnnAg~~ 122 (291)
T 3cxt_A 109 VGIIDILVNNAGII 122 (291)
T ss_dssp TCCCCEEEECCCCC
T ss_pred cCCCcEEEECCCcC
Confidence 12689999765444
No 451
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=74.64 E-value=13 Score=28.01 Aligned_cols=49 Identities=14% Similarity=0.193 Sum_probs=32.6
Q ss_pred CCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCC
Q 030935 69 FSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKL 119 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~ 119 (169)
++++++|=-|++.|+- ...+++.|++|++++.++ +-++.+.+.++..+.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~ 60 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNP--DKLAGAVQELEALGA 60 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHTTCC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHHhCC
Confidence 5788999999765532 234455689999999984 456655555554443
No 452
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=74.63 E-value=13 Score=27.21 Aligned_cols=77 Identities=16% Similarity=0.124 Sum_probs=43.5
Q ss_pred CCCeEEEECCCCCHHHHHH----HH-hCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC-----
Q 030935 70 SGANVVELGAGTSLPGLVA----AK-VGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD----- 137 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~~----a~-~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~----- 137 (169)
++++||=.| |+|.+|..+ ++ .|++|++++.+. +-++.+.+.+...+..+.+...+..+... ....
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDV--TRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSH--HHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCCh--HHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 467888777 456666544 44 588999999873 45555555555444444444444333211 0001
Q ss_pred -CCCcEEEEcCcC
Q 030935 138 -LNPNIILGADVF 149 (169)
Q Consensus 138 -~~fDlIi~sd~i 149 (169)
.++|+||.+--+
T Consensus 80 ~g~id~li~~Ag~ 92 (276)
T 1wma_A 80 YGGLDVLVNNAGI 92 (276)
T ss_dssp HSSEEEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 268999865433
No 453
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=74.53 E-value=10 Score=28.31 Aligned_cols=80 Identities=14% Similarity=0.073 Sum_probs=45.8
Q ss_pred CCCCCeEEEECCCCCHHHH----HHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhC-CcceEEEEEcCCCCc--CCC----
Q 030935 68 RFSGANVVELGAGTSLPGL----VAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNK-LNCRVMGLTWGFLDA--SIF---- 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l----~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~-~~~~~~~l~~~~~~~--~~~---- 136 (169)
.++++++|=-|++.| +|. .+++.|++|++++.++ +-++.+.+.++..+ ..+.+...+..+... ...
T Consensus 7 ~l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKG-IGRGIATVFARAGANVAVAGRST--ADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp CCTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 357888998887655 444 3445689999999984 45555555554443 333333333332111 000
Q ss_pred --CCCCcEEEEcCcCC
Q 030935 137 --DLNPNIILGADVFY 150 (169)
Q Consensus 137 --~~~fDlIi~sd~iy 150 (169)
-.++|++|.+--+.
T Consensus 84 ~~~g~id~lvnnAg~~ 99 (262)
T 3pk0_A 84 EEFGGIDVVCANAGVF 99 (262)
T ss_dssp HHHSCCSEEEECCCCC
T ss_pred HHhCCCCEEEECCCCC
Confidence 02789999765544
No 454
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=74.27 E-value=14 Score=30.23 Aligned_cols=73 Identities=18% Similarity=0.170 Sum_probs=42.6
Q ss_pred CCCCCeEEEECCCCCHHHH--HHHHhCCeEEEEcCCCc--HHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEE
Q 030935 68 RFSGANVVELGAGTSLPGL--VAAKVGSNVTLTDDSNR--IEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNII 143 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l--~~a~~ga~V~~~D~~~~--~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlI 143 (169)
.+++++|+=+|.|....+. .++++|++|++.|..+. +... +.++..++.+ . .+..........+|+|
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~----~~L~~~gi~~--~---~g~~~~~~~~~~~d~v 76 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTA----QSLLEEGIKV--V---CGSHPLELLDEDFCYM 76 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHH----HHHHHTTCEE--E---ESCCCGGGGGSCEEEE
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHH----HHHHhCCCEE--E---ECCChHHhhcCCCCEE
Confidence 4578899999998443333 45567999999999642 1122 2344455532 1 2322222222238999
Q ss_pred EEcCcC
Q 030935 144 LGADVF 149 (169)
Q Consensus 144 i~sd~i 149 (169)
+-|.-+
T Consensus 77 v~spgi 82 (451)
T 3lk7_A 77 IKNPGI 82 (451)
T ss_dssp EECTTS
T ss_pred EECCcC
Confidence 988766
No 455
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=74.19 E-value=7.4 Score=30.50 Aligned_cols=46 Identities=15% Similarity=0.070 Sum_probs=29.5
Q ss_pred hccCCCCC--CeEEEECCC--CCHHHHHHHH-hCC-eEEEEcCCCcHHHHHHHH
Q 030935 64 QQRYRFSG--ANVVELGAG--TSLPGLVAAK-VGS-NVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 64 ~~~~~~~~--~~vLElGcG--tGl~~l~~a~-~ga-~V~~~D~~~~~~~l~~~~ 111 (169)
+.....+| ++||=.|++ .|...+.+++ .|+ +|++++.++ +-++.++
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~--~~~~~~~ 203 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH--EKCILLT 203 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH--HHHHHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH--HHHHHHH
Confidence 33445578 899999983 4444444443 688 999999983 3444443
No 456
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=74.07 E-value=12 Score=27.71 Aligned_cols=80 Identities=13% Similarity=0.094 Sum_probs=45.3
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHh-CCcceEEEEEc--CCCCc--CCC---
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMN-KLNCRVMGLTW--GFLDA--SIF--- 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n-~~~~~~~~l~~--~~~~~--~~~--- 136 (169)
.++++++|=-|++.|+- ...+++.|++|++++.++ +-++.+.+.+... +..+.+...+. .+... ...
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNE--EKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI 86 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence 46788999999765532 223455689999999984 4555554444433 22444444443 21110 000
Q ss_pred ---CCCCcEEEEcCcC
Q 030935 137 ---DLNPNIILGADVF 149 (169)
Q Consensus 137 ---~~~fDlIi~sd~i 149 (169)
-.++|++|.+--+
T Consensus 87 ~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 87 AVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHCSCCSEEEECCCC
T ss_pred HHhCCCCCEEEECCcc
Confidence 1378999976544
No 457
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=73.90 E-value=23 Score=26.17 Aligned_cols=88 Identities=13% Similarity=0.026 Sum_probs=47.1
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHh--CCcceEEEEEcCCCCc--CCC----
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMN--KLNCRVMGLTWGFLDA--SIF---- 136 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n--~~~~~~~~l~~~~~~~--~~~---- 136 (169)
++++++|=.|++.| +|..+ ++.|++|++++.+. +-++.+...+... +..+.+...+..+... ...
T Consensus 5 ~~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (267)
T 2gdz_A 5 VNGKVALVTGAAQG-IGRAFAEALLLKGAKVALVDWNL--EAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV 81 (267)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCc-HHHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence 46788998896544 44443 44688999999883 3444443333321 1122333333322110 000
Q ss_pred --CCCCcEEEEcCcCCCCCChHHHH
Q 030935 137 --DLNPNIILGADVFYDASGKICAF 159 (169)
Q Consensus 137 --~~~fDlIi~sd~iy~~~~~~~l~ 159 (169)
-.++|++|.+--+.....++..+
T Consensus 82 ~~~g~id~lv~~Ag~~~~~~~~~~~ 106 (267)
T 2gdz_A 82 DHFGRLDILVNNAGVNNEKNWEKTL 106 (267)
T ss_dssp HHHSCCCEEEECCCCCCSSSHHHHH
T ss_pred HHcCCCCEEEECCCCCChhhHHHHH
Confidence 02689999776665555555443
No 458
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=73.89 E-value=16 Score=27.02 Aligned_cols=79 Identities=16% Similarity=0.213 Sum_probs=44.1
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHh-CCcceEEEEEcCCCCc--CCCC----
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMN-KLNCRVMGLTWGFLDA--SIFD---- 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n-~~~~~~~~l~~~~~~~--~~~~---- 137 (169)
++++++|=.|++.| +|..+ ++.|++|++++.++ +-++.+.+.+... +..+.+...+..+... ....
T Consensus 5 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 5 ISGKVAVITGSSSG-IGLAIAEGFAKEGAHIVLVARQV--DRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS 81 (263)
T ss_dssp CTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCH--HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46788998887655 44443 44688999999884 3455444444332 4444433333333211 0001
Q ss_pred --CCCcEEEEcCcCC
Q 030935 138 --LNPNIILGADVFY 150 (169)
Q Consensus 138 --~~fDlIi~sd~iy 150 (169)
.++|++|.+--+.
T Consensus 82 ~~g~id~lv~~Ag~~ 96 (263)
T 3ai3_A 82 SFGGADILVNNAGTG 96 (263)
T ss_dssp HHSSCSEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 2689998765443
No 459
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=73.18 E-value=17 Score=27.18 Aligned_cols=84 Identities=14% Similarity=0.190 Sum_probs=47.8
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCc----------HHHHHHHHHHHHHhCCcceEEEEEcCCCCc-
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNR----------IEVLKNMRRVCEMNKLNCRVMGLTWGFLDA- 133 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~----------~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~- 133 (169)
.++++++|=-|++.|+- ...+++.|++|+++|.++. .+.++.....+...+..+.+...+..+...
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 45788999999776542 2344556899999998621 234444444455555554444444333211
Q ss_pred -CCCC------CCCcEEEEcCcCCC
Q 030935 134 -SIFD------LNPNIILGADVFYD 151 (169)
Q Consensus 134 -~~~~------~~fDlIi~sd~iy~ 151 (169)
.... .++|++|.+--+..
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~ 111 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGIST 111 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCC
Confidence 0011 27899997665543
No 460
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=73.02 E-value=9.5 Score=25.34 Aligned_cols=37 Identities=19% Similarity=0.301 Sum_probs=25.5
Q ss_pred CCeEEEECCCCCHHHHHHHH----hCCeEEEEcCCCcHHHHHHHH
Q 030935 71 GANVVELGAGTSLPGLVAAK----VGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 71 ~~~vLElGcGtGl~~l~~a~----~ga~V~~~D~~~~~~~l~~~~ 111 (169)
.++|+=+||| .+|..+++ .|.+|+++|.+ ++.++.++
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~--~~~~~~~~ 46 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKS--KEKIELLE 46 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESC--HHHHHHHH
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECC--HHHHHHHH
Confidence 4578888885 46655544 58899999998 44555443
No 461
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=72.92 E-value=13 Score=27.24 Aligned_cols=89 Identities=12% Similarity=0.145 Sum_probs=47.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHH----hCCe-EEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCC-Cc--CCCC---
Q 030935 69 FSGANVVELGAGTSLPGLVAAK----VGSN-VTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFL-DA--SIFD--- 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~a~----~ga~-V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~-~~--~~~~--- 137 (169)
++++++|=.|+ +|.+|..+++ .|++ |++++.++..+.++.++... .+..+.+...+..+. .. ....
T Consensus 3 l~~k~vlVtGa-s~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T 1sby_A 3 LTNKNVIFVAA-LGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN--PKVNITFHTYDVTVPVAESKKLLKKIF 79 (254)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC--TTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCcEEEEECC-CChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhC--CCceEEEEEEecCCChHHHHHHHHHHH
Confidence 46788998886 4666665544 5886 99999886323333332211 122333333333322 10 0001
Q ss_pred ---CCCcEEEEcCcCCCCCChHHHHH
Q 030935 138 ---LNPNIILGADVFYDASGKICAFE 160 (169)
Q Consensus 138 ---~~fDlIi~sd~iy~~~~~~~l~~ 160 (169)
.++|++|.+--+...+.++..++
T Consensus 80 ~~~g~id~lv~~Ag~~~~~~~~~~~~ 105 (254)
T 1sby_A 80 DQLKTVDILINGAGILDDHQIERTIA 105 (254)
T ss_dssp HHHSCCCEEEECCCCCCTTCHHHHHH
T ss_pred HhcCCCCEEEECCccCCHHHHhhhhe
Confidence 26899997766555555554443
No 462
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=72.86 E-value=11 Score=28.23 Aligned_cols=79 Identities=22% Similarity=0.245 Sum_probs=44.5
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCC---cceEEEEEcCCCCc--CCCC--
Q 030935 69 FSGANVVELGAGTSLPGLV----AAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKL---NCRVMGLTWGFLDA--SIFD-- 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~----~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~---~~~~~~l~~~~~~~--~~~~-- 137 (169)
++++++|=.|++.| +|.. +++.|++|++++.++ +-++.+.+.+...+. .+.+...+..+... ....
T Consensus 4 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 4 FSNKTVIITGSSNG-IGRTTAILFAQEGANVTITGRSS--ERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST 80 (280)
T ss_dssp TTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence 46788888886655 4443 345689999999983 455555554543333 33333333333211 0011
Q ss_pred ----CCCcEEEEcCcCC
Q 030935 138 ----LNPNIILGADVFY 150 (169)
Q Consensus 138 ----~~fDlIi~sd~iy 150 (169)
.++|++|.+--+.
T Consensus 81 ~~~~g~iD~lv~nAg~~ 97 (280)
T 1xkq_A 81 LKQFGKIDVLVNNAGAA 97 (280)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHhcCCCCEEEECCCCC
Confidence 2689999765443
No 463
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=72.81 E-value=5.1 Score=26.97 Aligned_cols=36 Identities=14% Similarity=0.229 Sum_probs=24.4
Q ss_pred CeEEEECCCCCHHHHHHH----HhCCeEEEEcCCCcHHHHHHHH
Q 030935 72 ANVVELGAGTSLPGLVAA----KVGSNVTLTDDSNRIEVLKNMR 111 (169)
Q Consensus 72 ~~vLElGcGtGl~~l~~a----~~ga~V~~~D~~~~~~~l~~~~ 111 (169)
.+|+=+||| .+|..++ +.|.+|+++|.+ ++.++.++
T Consensus 8 ~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~--~~~~~~~~ 47 (140)
T 3fwz_A 8 NHALLVGYG--RVGSLLGEKLLASDIPLVVIETS--RTRVDELR 47 (140)
T ss_dssp SCEEEECCS--HHHHHHHHHHHHTTCCEEEEESC--HHHHHHHH
T ss_pred CCEEEECcC--HHHHHHHHHHHHCCCCEEEEECC--HHHHHHHH
Confidence 468888875 4554444 457899999999 45665554
No 464
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=72.79 E-value=3.7 Score=32.57 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=23.9
Q ss_pred CCCCCeEEEECC-C-CCHHHHHHHH-hCCeEEEEcC
Q 030935 68 RFSGANVVELGA-G-TSLPGLVAAK-VGSNVTLTDD 100 (169)
Q Consensus 68 ~~~~~~vLElGc-G-tGl~~l~~a~-~ga~V~~~D~ 100 (169)
..+|.+||=.|+ | .|...+.+++ .|++|++++.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~ 216 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS 216 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 457889999994 4 5555555555 5889999983
No 465
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=72.68 E-value=17 Score=27.63 Aligned_cols=79 Identities=13% Similarity=0.209 Sum_probs=46.4
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCC---eEEEEcCCCcHHHHHHHHHHHHHh--CCcceEEEEEcCCCCc------
Q 030935 69 FSGANVVELGAGTSLPGLV----AAKVGS---NVTLTDDSNRIEVLKNMRRVCEMN--KLNCRVMGLTWGFLDA------ 133 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~----~a~~ga---~V~~~D~~~~~~~l~~~~~n~~~n--~~~~~~~~l~~~~~~~------ 133 (169)
++++++|=-|++.|+ |.. +++.|+ +|++++.+ .+.++.+.+.+... +..+.+...+..+...
T Consensus 31 l~~k~~lVTGas~GI-G~aia~~l~~~G~~~~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 107 (287)
T 3rku_A 31 LAKKTVLITGASAGI-GKATALEYLEASNGDMKLILAARR--LEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE 107 (287)
T ss_dssp HTTCEEEEESTTSHH-HHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred cCCCEEEEecCCChH-HHHHHHHHHHcCCCCceEEEEECC--HHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence 368899999977654 443 344576 99999998 44666666656544 3333334444433221
Q ss_pred CCCC--CCCcEEEEcCcCC
Q 030935 134 SIFD--LNPNIILGADVFY 150 (169)
Q Consensus 134 ~~~~--~~fDlIi~sd~iy 150 (169)
.... .+.|++|.+--+.
T Consensus 108 ~~~~~~g~iD~lVnnAG~~ 126 (287)
T 3rku_A 108 NLPQEFKDIDILVNNAGKA 126 (287)
T ss_dssp TSCGGGCSCCEEEECCCCC
T ss_pred HHHHhcCCCCEEEECCCcC
Confidence 1111 2789999765443
No 466
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=72.51 E-value=23 Score=27.48 Aligned_cols=71 Identities=17% Similarity=0.167 Sum_probs=41.9
Q ss_pred CCeEEEECCC-CCHH--HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEcC
Q 030935 71 GANVVELGAG-TSLP--GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGAD 147 (169)
Q Consensus 71 ~~~vLElGcG-tGl~--~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~sd 147 (169)
.++|.=+|-| +|.. +..++++|++|++.|..+.+...+ .++..++.+ . .+.....+....+|+|+.|.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~----~L~~~gi~v--~---~g~~~~~l~~~~~d~vV~Sp 74 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMST----QLEALGIDV--Y---EGFDAAQLDEFKADVYVIGN 74 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHH----HHHHTTCEE--E---ESCCGGGGGSCCCSEEEECT
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHH----HHHhCCCEE--E---CCCCHHHcCCCCCCEEEECC
Confidence 3578888875 6664 346678899999999975322332 234445532 2 22221222113689999887
Q ss_pred cCC
Q 030935 148 VFY 150 (169)
Q Consensus 148 ~iy 150 (169)
-+-
T Consensus 75 gi~ 77 (326)
T 3eag_A 75 VAK 77 (326)
T ss_dssp TCC
T ss_pred CcC
Confidence 763
No 467
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=72.49 E-value=15 Score=27.00 Aligned_cols=79 Identities=11% Similarity=0.090 Sum_probs=45.2
Q ss_pred CCCeEEEECCCCCHHHHH----HHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC------
Q 030935 70 SGANVVELGAGTSLPGLV----AAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD------ 137 (169)
Q Consensus 70 ~~~~vLElGcGtGl~~l~----~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~------ 137 (169)
.++++|=-|++.| +|.. +++.|++|++++... ++-.+.+.+.++..+..+.+...+..+... ....
T Consensus 3 ~~k~~lVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 3 MTKSALVTGASRG-IGRSIALQLAEEGYNVAVNYAGS-KEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp CSCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5677887776655 4443 445689999988754 345555555565555554444343333211 0000
Q ss_pred CCCcEEEEcCcCC
Q 030935 138 LNPNIILGADVFY 150 (169)
Q Consensus 138 ~~fDlIi~sd~iy 150 (169)
.++|+++.+--+.
T Consensus 81 g~id~lv~nAg~~ 93 (246)
T 3osu_A 81 GSLDVLVNNAGIT 93 (246)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 2789999766554
No 468
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=72.27 E-value=7.2 Score=31.94 Aligned_cols=44 Identities=9% Similarity=-0.016 Sum_probs=29.7
Q ss_pred HHHHHhccCCCCCCeEEEECCCCCHHH---HH--HHHhCCeEEEEcCCC
Q 030935 59 AEYVWQQRYRFSGANVVELGAGTSLPG---LV--AAKVGSNVTLTDDSN 102 (169)
Q Consensus 59 a~~l~~~~~~~~~~~vLElGcGtGl~~---l~--~a~~ga~V~~~D~~~ 102 (169)
.+|....+....++++|=.|+++|+-- +. +++.|++|++++.+.
T Consensus 48 i~y~~~~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~ 96 (418)
T 4eue_A 48 IDYCKKAIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYET 96 (418)
T ss_dssp HHHHHHSCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCC
T ss_pred HHHHhccCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCc
Confidence 345555555567889999999887532 22 223488999998864
No 469
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=72.16 E-value=14 Score=28.02 Aligned_cols=59 Identities=12% Similarity=-0.021 Sum_probs=35.2
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEc-CCCcHHHHHHHHHHHH-HhCCcceEEEEEcCC
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTD-DSNRIEVLKNMRRVCE-MNKLNCRVMGLTWGF 130 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D-~~~~~~~l~~~~~n~~-~n~~~~~~~~l~~~~ 130 (169)
++++++|=-|++.| +|..+ ++.|++|++++ .+ ++-++.+.+.+. ..+..+.+...+..+
T Consensus 7 l~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~Dl~~ 71 (291)
T 1e7w_A 7 PTVPVALVTGAAKR-LGRSIAEGLHAEGYAVCLHYHRS--AAEANALSATLNARRPNSAITVQADLSN 71 (291)
T ss_dssp -CCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHHSTTCEEEEECCCSS
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCCeEEEEcCCC--HHHHHHHHHHHhhhcCCeeEEEEeecCC
Confidence 46788888887655 44443 45689999999 77 345555544454 334444444444443
No 470
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=72.09 E-value=14 Score=27.78 Aligned_cols=81 Identities=15% Similarity=0.199 Sum_probs=45.3
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------ 136 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------ 136 (169)
++++++|=-|++.| +|..+ ++.|++|++++.+.. ...+.+.+.+...+.++.+...+..+... ...
T Consensus 27 ~~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 27 LEGKVALVTGAGRG-IGREMAMELGRRGCKVIVNYANST-ESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888887654 45444 446889999998852 34444444455444444433333332110 000
Q ss_pred CCCCcEEEEcCcCCC
Q 030935 137 DLNPNIILGADVFYD 151 (169)
Q Consensus 137 ~~~fDlIi~sd~iy~ 151 (169)
-.++|++|.+--+..
T Consensus 105 ~g~iD~lv~~Ag~~~ 119 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVS 119 (283)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred cCCCCEEEECCCcCC
Confidence 026899997665543
No 471
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=72.03 E-value=15 Score=26.90 Aligned_cols=80 Identities=14% Similarity=0.088 Sum_probs=43.4
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC-----
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD----- 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~----- 137 (169)
++++++|=.|++ |.+|..+ ++.|++|++++... ++-++.+.+.+...+..+.+...+..+... ....
T Consensus 2 l~~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 2 LKGKVALVTGAS-RGIGRAIAIDLAKQGANVVVNYAGN-EQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp CTTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 357788877765 4455444 44688999998822 345555544454444444333333332111 0011
Q ss_pred -CCCcEEEEcCcCC
Q 030935 138 -LNPNIILGADVFY 150 (169)
Q Consensus 138 -~~fDlIi~sd~iy 150 (169)
.++|++|.+--+.
T Consensus 80 ~g~id~lv~nAg~~ 93 (246)
T 2uvd_A 80 FGQVDILVNNAGVT 93 (246)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 2689999765444
No 472
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=71.82 E-value=19 Score=26.73 Aligned_cols=80 Identities=11% Similarity=0.173 Sum_probs=45.0
Q ss_pred CCCCeEEEECCCCCHHHH----HHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceE--EEEEcCCCCc--CCC--CC
Q 030935 69 FSGANVVELGAGTSLPGL----VAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRV--MGLTWGFLDA--SIF--DL 138 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l----~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~--~~l~~~~~~~--~~~--~~ 138 (169)
++++++|=-|++.| +|. .+++.|++|++++.++ +-++.+.+.+...+....+ ...+..+... ... -.
T Consensus 8 l~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 8 LKGKTALVTGSTAG-IGKAIATSLVAEGANVLINGRRE--ENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred cCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcC
Confidence 57888998887655 444 3445689999999984 4555555555544322222 2222222110 000 13
Q ss_pred CCcEEEEcCcCCC
Q 030935 139 NPNIILGADVFYD 151 (169)
Q Consensus 139 ~fDlIi~sd~iy~ 151 (169)
++|+++.+--+..
T Consensus 85 ~id~lv~nAg~~~ 97 (267)
T 3t4x_A 85 KVDILINNLGIFE 97 (267)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7899997665543
No 473
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=71.79 E-value=20 Score=26.41 Aligned_cols=81 Identities=15% Similarity=0.065 Sum_probs=46.8
Q ss_pred CCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhC---CcceEEEEEcCCCCc--CCC----
Q 030935 69 FSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNK---LNCRVMGLTWGFLDA--SIF---- 136 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~---~~~~~~~l~~~~~~~--~~~---- 136 (169)
++++++|=-|++.|+- ...+++.|++|++++.++ +-++.+.+.+.... ..+.+...+..+... ...
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSK--QNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH 82 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCH--HHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence 4678899899876642 234455799999999984 46665555554432 233333333333211 000
Q ss_pred --CCCCcEEEEcCcCCC
Q 030935 137 --DLNPNIILGADVFYD 151 (169)
Q Consensus 137 --~~~fDlIi~sd~iy~ 151 (169)
-.+.|++|.+--+..
T Consensus 83 ~~~g~iD~lvnnAg~~~ 99 (250)
T 3nyw_A 83 QKYGAVDILVNAAAMFM 99 (250)
T ss_dssp HHHCCEEEEEECCCCCC
T ss_pred HhcCCCCEEEECCCcCC
Confidence 037899997665543
No 474
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=71.78 E-value=15 Score=27.65 Aligned_cols=78 Identities=10% Similarity=0.052 Sum_probs=45.1
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------ 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------ 136 (169)
.++++++|=-|++.|+- ...+++.|++|++++.++ +-++.+...+ +..+.+...+..+... ...
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDG--DAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence 35788999999887753 334566799999999984 3444433333 3344444343333211 000
Q ss_pred CCCCcEEEEcCcCC
Q 030935 137 DLNPNIILGADVFY 150 (169)
Q Consensus 137 ~~~fDlIi~sd~iy 150 (169)
-.+.|++|.+--+.
T Consensus 101 ~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 101 FGGVDKLVANAGVV 114 (277)
T ss_dssp HSSCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 02789999766554
No 475
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=71.73 E-value=13 Score=27.39 Aligned_cols=35 Identities=23% Similarity=0.338 Sum_probs=25.7
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCC
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSN 102 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~ 102 (169)
.++++++|=-|++.|+- ...+++.|++|++++.+.
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~ 40 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINA 40 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45788999999776542 234455799999999984
No 476
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=71.71 E-value=4 Score=31.51 Aligned_cols=80 Identities=11% Similarity=0.047 Sum_probs=44.6
Q ss_pred eEEEECC-C-CCHHHHHHHH-hCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCC--cCCCCCCCcEEEEcC
Q 030935 73 NVVELGA-G-TSLPGLVAAK-VGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLD--ASIFDLNPNIILGAD 147 (169)
Q Consensus 73 ~vLElGc-G-tGl~~l~~a~-~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~--~~~~~~~fDlIi~sd 147 (169)
+||=.|+ | .|+..+.+++ .|++|++++.++. -++.+++ .+... + ++-.+.. .......+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~--~~~~~~~----lGa~~-v--i~~~~~~~~~~~~~~~~d~v~d-- 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRES--THGYLKS----LGANR-I--LSRDEFAESRPLEKQLWAGAID-- 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG--GHHHHHH----HTCSE-E--EEGGGSSCCCSSCCCCEEEEEE--
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHh----cCCCE-E--EecCCHHHHHhhcCCCccEEEE--
Confidence 4999997 3 5666666665 5889999998853 4555543 34332 1 2222211 1222347888773
Q ss_pred cCCCCCChHHHHHHHHHhccC
Q 030935 148 VFYDASGKICAFEILICSLFP 168 (169)
Q Consensus 148 ~iy~~~~~~~l~~~l~~~L~p 168 (169)
++= .+.++...+.|+|
T Consensus 218 ~~g-----~~~~~~~~~~l~~ 233 (324)
T 3nx4_A 218 TVG-----DKVLAKVLAQMNY 233 (324)
T ss_dssp SSC-----HHHHHHHHHTEEE
T ss_pred CCC-----cHHHHHHHHHHhc
Confidence 321 1256666666665
No 477
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=71.25 E-value=28 Score=25.76 Aligned_cols=81 Identities=11% Similarity=-0.074 Sum_probs=46.4
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHH-hCC-cceEEEEEcCCCCc--CCC----
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEM-NKL-NCRVMGLTWGFLDA--SIF---- 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~-n~~-~~~~~~l~~~~~~~--~~~---- 136 (169)
.++++++|=-|++.|+- ...+++.|++|++++.+. +-++.+.+.+.. .+. .+.+...+..+... ...
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDG--ERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 45788999999876643 234455689999999984 456655555544 222 23333333332111 000
Q ss_pred --CCCCcEEEEcCcCC
Q 030935 137 --DLNPNIILGADVFY 150 (169)
Q Consensus 137 --~~~fDlIi~sd~iy 150 (169)
-.+.|++|.+--+.
T Consensus 83 ~~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 83 RTLGCASILVNNAGQG 98 (265)
T ss_dssp HHHCSCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 12789999766544
No 478
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=70.68 E-value=10 Score=28.72 Aligned_cols=80 Identities=4% Similarity=-0.101 Sum_probs=48.2
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------ 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------ 136 (169)
.++||.+|=-|++.|+- +..+++.|++|++++.++. -.+.+++ +...+.++.....+..+... ...
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~--~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~ 80 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAP--DGAFLDA-LAQRQPRATYLPVELQDDAQCRDAVAQTIAT 80 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--CHHHHHH-HHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcc--cHHHHHH-HHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence 36899999999988863 4566778999999998863 2233322 34445555444444333211 000
Q ss_pred CCCCcEEEEcCcCC
Q 030935 137 DLNPNIILGADVFY 150 (169)
Q Consensus 137 ~~~fDlIi~sd~iy 150 (169)
-.+.|+++.+-=+.
T Consensus 81 ~G~iDiLVNnAGi~ 94 (258)
T 4gkb_A 81 FGRLDGLVNNAGVN 94 (258)
T ss_dssp HSCCCEEEECCCCC
T ss_pred hCCCCEEEECCCCC
Confidence 13789999766554
No 479
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=70.58 E-value=12 Score=28.25 Aligned_cols=83 Identities=17% Similarity=0.113 Sum_probs=47.2
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCC--------------cHHHHHHHHHHHHHhCCcceEEEEEcCC
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSN--------------RIEVLKNMRRVCEMNKLNCRVMGLTWGF 130 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~--------------~~~~l~~~~~n~~~n~~~~~~~~l~~~~ 130 (169)
.++++++|=-|++.|+- ...+++.|++|+++|.++ ..+-++.+...+...+..+.+...+..+
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 87 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD 87 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence 45788999999887642 334455799999998762 1234444444444444444444333332
Q ss_pred CCc--CCCC------CCCcEEEEcCcCC
Q 030935 131 LDA--SIFD------LNPNIILGADVFY 150 (169)
Q Consensus 131 ~~~--~~~~------~~fDlIi~sd~iy 150 (169)
... .... .+.|++|.+--+.
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 211 0000 2789999766543
No 480
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=70.56 E-value=15 Score=27.96 Aligned_cols=79 Identities=20% Similarity=0.231 Sum_probs=44.7
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHhCC---cceEEEEEcCCCCc--CCCC--
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMNKL---NCRVMGLTWGFLDA--SIFD-- 137 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~---~~~~~~l~~~~~~~--~~~~-- 137 (169)
++++++|=.|++.| +|..+ ++.|++|++++.++ +-++.+...+...+. .+.+...+..+... ....
T Consensus 24 l~~k~vlVTGas~g-IG~aia~~L~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 24 FSGKSVIITGSSNG-IGRSAAVIFAKEGAQVTITGRNE--DRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT 100 (297)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence 46788888886554 45444 44689999999983 455555555544443 33333333333211 0011
Q ss_pred ----CCCcEEEEcCcCC
Q 030935 138 ----LNPNIILGADVFY 150 (169)
Q Consensus 138 ----~~fDlIi~sd~iy 150 (169)
.++|++|.+--+.
T Consensus 101 ~~~~g~iD~lvnnAG~~ 117 (297)
T 1xhl_A 101 LAKFGKIDILVNNAGAN 117 (297)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHhcCCCCEEEECCCcC
Confidence 2789999765443
No 481
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=70.55 E-value=16 Score=30.56 Aligned_cols=72 Identities=22% Similarity=0.290 Sum_probs=42.3
Q ss_pred CCCCCeEEEECCC-CCHH--HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEE
Q 030935 68 RFSGANVVELGAG-TSLP--GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIIL 144 (169)
Q Consensus 68 ~~~~~~vLElGcG-tGl~--~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi 144 (169)
.++.++|.=+|-| +|.. +..+.++|++|+++|..+.+.+.+ .++..++.+ . .|..... ....+|+|+
T Consensus 16 ~~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~----~L~~~gi~~--~---~G~~~~~-~~~~~d~vV 85 (524)
T 3hn7_A 16 YFQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMST----QLEQAGVTI--E---EGYLIAH-LQPAPDLVV 85 (524)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHH----HHHHTTCEE--E---ESCCGGG-GCSCCSEEE
T ss_pred eecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHH----HHHHCCCEE--E---CCCCHHH-cCCCCCEEE
Confidence 3577888888876 6653 445677899999999975322332 234445542 1 2322111 223689999
Q ss_pred EcCcC
Q 030935 145 GADVF 149 (169)
Q Consensus 145 ~sd~i 149 (169)
-|.-+
T Consensus 86 ~Spgi 90 (524)
T 3hn7_A 86 VGNAM 90 (524)
T ss_dssp ECTTC
T ss_pred ECCCc
Confidence 88876
No 482
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=70.48 E-value=22 Score=25.68 Aligned_cols=78 Identities=13% Similarity=0.045 Sum_probs=44.5
Q ss_pred CCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHH-HhCCcceEEEEEcCCCCc--CCCC------
Q 030935 71 GANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCE-MNKLNCRVMGLTWGFLDA--SIFD------ 137 (169)
Q Consensus 71 ~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~-~n~~~~~~~~l~~~~~~~--~~~~------ 137 (169)
++++|=.|++.| +|..+ ++.|++|++++.+. +-++.+.+.+. ..+..+.+...+..+... ....
T Consensus 2 ~k~vlITGas~g-IG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 2 MKVAVITGASRG-IGEAIARALARDGYALALGARSV--DRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 567888886654 44444 44688999999984 45555444443 445544444444433211 1111
Q ss_pred CCCcEEEEcCcCCC
Q 030935 138 LNPNIILGADVFYD 151 (169)
Q Consensus 138 ~~fDlIi~sd~iy~ 151 (169)
.++|++|.+--+..
T Consensus 79 g~id~li~~Ag~~~ 92 (235)
T 3l77_A 79 GDVDVVVANAGLGY 92 (235)
T ss_dssp SSCSEEEECCCCCC
T ss_pred CCCCEEEECCcccc
Confidence 27899997765543
No 483
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=70.07 E-value=13 Score=28.64 Aligned_cols=82 Identities=15% Similarity=0.140 Sum_probs=45.6
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCC----------CcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDS----------NRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA- 133 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~----------~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~- 133 (169)
.++++++|=-|++.|+- ...+++.|++|+++|.+ .. .++.+...+...+..+.+...+..+...
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 101 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGS--AAQSVVDEITAAGGEAVADGSNVADWDQA 101 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTS--HHHHHHHHHHHTTCEEEEECCCTTSHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHH--HHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence 45788899888775532 23445568999999976 32 4455555555555443333222222111
Q ss_pred -CCCC------CCCcEEEEcCcCCC
Q 030935 134 -SIFD------LNPNIILGADVFYD 151 (169)
Q Consensus 134 -~~~~------~~fDlIi~sd~iy~ 151 (169)
.... .+.|++|.+--+..
T Consensus 102 ~~~~~~~~~~~g~iD~lv~nAg~~~ 126 (322)
T 3qlj_A 102 AGLIQTAVETFGGLDVLVNNAGIVR 126 (322)
T ss_dssp HHHHHHHHHHHSCCCEEECCCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCC
Confidence 0000 27899997665544
No 484
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=69.92 E-value=14 Score=27.73 Aligned_cols=74 Identities=16% Similarity=0.038 Sum_probs=41.3
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc------CCC-C
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA------SIF-D 137 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~------~~~-~ 137 (169)
.++++++|=.|++.|+- ...+++.|++|++++.+. +-++.+...+ +..+.+...+..+... ... -
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~--~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAA--EKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAANQL 101 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHTTS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh--HHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 35788899899776632 234455689999999984 3444443333 3334444344333211 010 1
Q ss_pred CCCcEEEEc
Q 030935 138 LNPNIILGA 146 (169)
Q Consensus 138 ~~fDlIi~s 146 (169)
.+.|++|.+
T Consensus 102 ~~id~lv~~ 110 (281)
T 3ppi_A 102 GRLRYAVVA 110 (281)
T ss_dssp SEEEEEEEC
T ss_pred CCCCeEEEc
Confidence 267888865
No 485
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=69.47 E-value=14 Score=27.41 Aligned_cols=43 Identities=16% Similarity=0.315 Sum_probs=29.2
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHH
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRR 112 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~ 112 (169)
.++++++|=-|++.|+- ...+++.|++|++++.++ +-++.+.+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~--~~~~~~~~ 50 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNE--SNIARIRE 50 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHH
Confidence 35788999999776642 234455789999999984 45554443
No 486
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=69.16 E-value=13 Score=28.74 Aligned_cols=88 Identities=17% Similarity=0.143 Sum_probs=48.8
Q ss_pred CCCCeEEEECCC--CCHHHHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcce-----E-EEEEcCCCCcCCCCCCC
Q 030935 69 FSGANVVELGAG--TSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCR-----V-MGLTWGFLDASIFDLNP 140 (169)
Q Consensus 69 ~~~~~vLElGcG--tGl~~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~-----~-~~l~~~~~~~~~~~~~f 140 (169)
+...+|.=+|+| .+.++..+++.|.+|++. .. ++.++.+++ +++... . ..+......+. -..+
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~--~~~~~~i~~----~g~~~~~~~~~~~~~~~~~~~~~~--~~~~ 87 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR--PQHVQAIEA----TGLRLETQSFDEQVKVSASSDPSA--VQGA 87 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC--HHHHHHHHH----HCEEEECSSCEEEECCEEESCGGG--GTTC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec--HhHHHHHHh----CCeEEEcCCCcEEEeeeeeCCHHH--cCCC
Confidence 345689999888 235556667778899999 66 445555543 232110 0 00000011111 1378
Q ss_pred cEEEEcCcCCCCCChHHHHHHHHHhccC
Q 030935 141 NIILGADVFYDASGKICAFEILICSLFP 168 (169)
Q Consensus 141 DlIi~sd~iy~~~~~~~l~~~l~~~L~p 168 (169)
|+||.+=.-+ ..+.+++.+...++|
T Consensus 88 D~vilavk~~---~~~~~l~~l~~~l~~ 112 (318)
T 3hwr_A 88 DLVLFCVKST---DTQSAALAMKPALAK 112 (318)
T ss_dssp SEEEECCCGG---GHHHHHHHHTTTSCT
T ss_pred CEEEEEcccc---cHHHHHHHHHHhcCC
Confidence 9998765544 467778888777765
No 487
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=68.76 E-value=21 Score=27.41 Aligned_cols=83 Identities=18% Similarity=0.133 Sum_probs=47.2
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCC----------cHHHHHHHHHHHHHhCCcceEEEEEcCCCCc-
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSN----------RIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA- 133 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~----------~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~- 133 (169)
.++++++|=-|++.|+- ...+++.|++|+++|.+. .++-++.+.+.+...+..+.+...+..+...
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL 122 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 45788999899876642 234455799999998751 1234444444455555554444444333211
Q ss_pred -CCCC------CCCcEEEEcCcCC
Q 030935 134 -SIFD------LNPNIILGADVFY 150 (169)
Q Consensus 134 -~~~~------~~fDlIi~sd~iy 150 (169)
.... .++|++|.+--+.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~ 146 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGIS 146 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 0000 2789999765544
No 488
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=68.70 E-value=16 Score=26.75 Aligned_cols=55 Identities=16% Similarity=0.141 Sum_probs=32.6
Q ss_pred CCCCCeEEEECCCCCHHHH----HHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEE
Q 030935 68 RFSGANVVELGAGTSLPGL----VAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVM 124 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~~l----~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~ 124 (169)
.++++++|=.|++.|+ |. .+++.|++|++++.... +..+.....+...+..+.+.
T Consensus 4 ~l~~k~vlITGas~gI-G~~~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 62 (255)
T 3icc_A 4 MLKGKVALVTGASRGI-GRAIAKRLANDGALVAIHYGNRK-EEAEETVYEIQSNGGSAFSI 62 (255)
T ss_dssp TTTTCEEEETTCSSHH-HHHHHHHHHHTTCEEEEEESSCS-HHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECCCChH-HHHHHHHHHHCCCeEEEEeCCch-HHHHHHHHHHHhcCCceEEE
Confidence 3578889988887664 43 44456889888644432 34454445555555444333
No 489
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=68.55 E-value=20 Score=26.41 Aligned_cols=80 Identities=15% Similarity=0.152 Sum_probs=45.3
Q ss_pred CCCCeEEEECCC--CCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCC-cceEEEEEcCCCCc--CCCC---
Q 030935 69 FSGANVVELGAG--TSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKL-NCRVMGLTWGFLDA--SIFD--- 137 (169)
Q Consensus 69 ~~~~~vLElGcG--tGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~-~~~~~~l~~~~~~~--~~~~--- 137 (169)
++++++|=.|++ .|+- ...+++.|++|++++.++. ..+.+++..+..+. .+.+...+..+... ....
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGER--LEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG--GHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 578899999987 4543 3455667999999988743 44444443433332 34444444333211 0000
Q ss_pred ---CCCcEEEEcCcCC
Q 030935 138 ---LNPNIILGADVFY 150 (169)
Q Consensus 138 ---~~fDlIi~sd~iy 150 (169)
.++|+++.+--+.
T Consensus 83 ~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFA 98 (266)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHhCCeeEEEEccccc
Confidence 2789988765443
No 490
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=68.50 E-value=7.6 Score=29.77 Aligned_cols=81 Identities=16% Similarity=0.096 Sum_probs=45.3
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhC-CcceEEEEEcCCCCc--CCC-----
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNK-LNCRVMGLTWGFLDA--SIF----- 136 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~-~~~~~~~l~~~~~~~--~~~----- 136 (169)
.++++++|=-|++.|+- ...+++.|++|++++.+.. -++.+...+...+ ..+.+...+..+... ...
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPR--ELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD 115 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGG--GGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH--HHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 35788899888766542 2344557899999999853 4555444454333 233333333332111 000
Q ss_pred -CCCCcEEEEcCcCC
Q 030935 137 -DLNPNIILGADVFY 150 (169)
Q Consensus 137 -~~~fDlIi~sd~iy 150 (169)
-.++|++|.+--+.
T Consensus 116 ~~g~iD~lvnnAg~~ 130 (293)
T 3rih_A 116 AFGALDVVCANAGIF 130 (293)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 12789999766554
No 491
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=68.43 E-value=25 Score=26.59 Aligned_cols=76 Identities=13% Similarity=0.091 Sum_probs=40.6
Q ss_pred CCCCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHH-hCCcceEEEEEcCCCCc--CCCCCCCc
Q 030935 68 RFSGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEM-NKLNCRVMGLTWGFLDA--SIFDLNPN 141 (169)
Q Consensus 68 ~~~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~-n~~~~~~~~l~~~~~~~--~~~~~~fD 141 (169)
..+++++|=+|+..|+- ...+++.|++|++++.+. +-.+.+.+.+.. .+ +.+...++.+... ... ..+|
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~--~~~~~l~~~~~~~~~--~~~~~~D~~~~~~~~~~~-~~~D 190 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL--DKAQAAADSVNKRFK--VNVTAAETADDASRAEAV-KGAH 190 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHHHHHHT--CCCEEEECCSHHHHHHHT-TTCS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH--HHHHHHHHHHHhcCC--cEEEEecCCCHHHHHHHH-HhCC
Confidence 45788999999544422 234455688999999873 333333333322 22 2333455543211 111 2478
Q ss_pred EEEEcCc
Q 030935 142 IILGADV 148 (169)
Q Consensus 142 lIi~sd~ 148 (169)
+||.+-.
T Consensus 191 vlVn~ag 197 (287)
T 1lu9_A 191 FVFTAGA 197 (287)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8886654
No 492
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=68.14 E-value=19 Score=26.50 Aligned_cols=78 Identities=9% Similarity=0.011 Sum_probs=43.5
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------ 136 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------ 136 (169)
+++++||=.|++ |.+|..+ ++.|++|++++.++ +-++.+...+...+..+.+...+..+... ...
T Consensus 12 l~~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (266)
T 1xq1_A 12 LKAKTVLVTGGT-KGIGHAIVEEFAGFGAVIHTCARNE--YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM 88 (266)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence 467888888865 4555544 44688999999883 35555444454444444333333322110 001
Q ss_pred -CCCCcEEEEcCcC
Q 030935 137 -DLNPNIILGADVF 149 (169)
Q Consensus 137 -~~~fDlIi~sd~i 149 (169)
..++|+||.+--+
T Consensus 89 ~~~~id~li~~Ag~ 102 (266)
T 1xq1_A 89 FGGKLDILINNLGA 102 (266)
T ss_dssp HTTCCSEEEEECCC
T ss_pred hCCCCcEEEECCCC
Confidence 1478999865443
No 493
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=67.79 E-value=12 Score=28.20 Aligned_cols=79 Identities=14% Similarity=-0.037 Sum_probs=44.4
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCeEEEEcCCCcHHHHHHHHHHHHHhC-CcceEEEEEcCCC-Cc--CCC----
Q 030935 69 FSGANVVELGAGTSLPGLV----AAKVGSNVTLTDDSNRIEVLKNMRRVCEMNK-LNCRVMGLTWGFL-DA--SIF---- 136 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~----~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~-~~~~~~~l~~~~~-~~--~~~---- 136 (169)
.++++||=-|++.| +|.. +++.|++|++++.+. +-++.+.+.+...+ ..+.+...+..+. .. ...
T Consensus 10 ~~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 10 TKRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDV--TKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp --CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHH
Confidence 46788898887655 4443 445689999999984 35554444454333 2344444444432 10 000
Q ss_pred --CCCCcEEEEcCcCC
Q 030935 137 --DLNPNIILGADVFY 150 (169)
Q Consensus 137 --~~~fDlIi~sd~iy 150 (169)
-.++|++|.+--+.
T Consensus 87 ~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 87 THFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHSSCCEEEECCCCC
T ss_pred HhCCCCCEEEECCccc
Confidence 13789999766554
No 494
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=67.56 E-value=4.2 Score=28.89 Aligned_cols=30 Identities=23% Similarity=0.310 Sum_probs=22.0
Q ss_pred eEEEECCCCCHH--HHHHHHhCCeEEEEcCCC
Q 030935 73 NVVELGAGTSLP--GLVAAKVGSNVTLTDDSN 102 (169)
Q Consensus 73 ~vLElGcGtGl~--~l~~a~~ga~V~~~D~~~ 102 (169)
.|+=+|+|...+ +..|++.|.+|++.|.++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 478889995433 346677888999999764
No 495
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=67.53 E-value=27 Score=26.20 Aligned_cols=79 Identities=16% Similarity=0.175 Sum_probs=44.2
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHh-CCcceEEEEEcCCCCc--CC------
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMN-KLNCRVMGLTWGFLDA--SI------ 135 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n-~~~~~~~~l~~~~~~~--~~------ 135 (169)
++++++|=.|++ |.+|..+ ++.|++|++++.+. +-++.+...+... +..+.+...+..+... ..
T Consensus 24 l~~k~vlITGas-ggiG~~la~~L~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (302)
T 1w6u_A 24 FQGKVAFITGGG-TGLGKGMTTLLSSLGAQCVIASRKM--DVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK 100 (302)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 577889988865 4455444 44688999999984 3454444444332 4444444333332111 00
Q ss_pred CCCCCcEEEEcCcCC
Q 030935 136 FDLNPNIILGADVFY 150 (169)
Q Consensus 136 ~~~~fDlIi~sd~iy 150 (169)
.-.++|+||.+--+.
T Consensus 101 ~~g~id~li~~Ag~~ 115 (302)
T 1w6u_A 101 VAGHPNIVINNAAGN 115 (302)
T ss_dssp HTCSCSEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 012679999765543
No 496
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=67.44 E-value=38 Score=27.99 Aligned_cols=69 Identities=12% Similarity=0.136 Sum_probs=43.2
Q ss_pred CCCeEEEECCC-CCHH--HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCcCCCCCCCcEEEEc
Q 030935 70 SGANVVELGAG-TSLP--GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDASIFDLNPNIILGA 146 (169)
Q Consensus 70 ~~~~vLElGcG-tGl~--~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~~~~~~~fDlIi~s 146 (169)
+.++|+=+|-| +|.. +..+.++|++|+++|..+. ...+ .++..++.+ ..+...+.+ ..+|+|+-|
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~-~~~~----~l~~~gi~~-----~~g~~~~~~--~~~d~vV~S 88 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN-SVTQ----HLTALGAQI-----YFHHRPENV--LDASVVVVS 88 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC-HHHH----HHHHTTCEE-----ESSCCGGGG--TTCSEEEEC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC-HHHH----HHHHCCCEE-----ECCCCHHHc--CCCCEEEEC
Confidence 34688888876 8874 5577788999999999864 2322 244445532 223221111 258999988
Q ss_pred CcCC
Q 030935 147 DVFY 150 (169)
Q Consensus 147 d~iy 150 (169)
.-+-
T Consensus 89 pgi~ 92 (494)
T 4hv4_A 89 TAIS 92 (494)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 7663
No 497
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=67.41 E-value=8.4 Score=29.01 Aligned_cols=32 Identities=28% Similarity=0.420 Sum_probs=23.8
Q ss_pred CCCeEEEECCC-CC-HHHHHHHHhCC-eEEEEcCC
Q 030935 70 SGANVVELGAG-TS-LPGLVAAKVGS-NVTLTDDS 101 (169)
Q Consensus 70 ~~~~vLElGcG-tG-l~~l~~a~~ga-~V~~~D~~ 101 (169)
++++|+=+||| .| .+...++..|. +++.+|.+
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56799999998 44 33456677786 89998875
No 498
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=67.29 E-value=12 Score=27.67 Aligned_cols=78 Identities=10% Similarity=0.033 Sum_probs=43.1
Q ss_pred CCCeEEEECCCCCHH---HHHHHHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCCC------C
Q 030935 70 SGANVVELGAGTSLP---GLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIFD------L 138 (169)
Q Consensus 70 ~~~~vLElGcGtGl~---~l~~a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~~------~ 138 (169)
.++++|=.|++.|+- ...+++.|++|++++... .+..+.+++.++..+..+.+...+..+... .... .
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 84 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSD-TTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG 84 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCC-hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 457788888765542 223445689999997765 345555555444444344444444333211 0000 2
Q ss_pred CCcEEEEcCc
Q 030935 139 NPNIILGADV 148 (169)
Q Consensus 139 ~fDlIi~sd~ 148 (169)
++|++|.+--
T Consensus 85 ~id~lv~~Ag 94 (264)
T 3i4f_A 85 KIDFLINNAG 94 (264)
T ss_dssp CCCEEECCCC
T ss_pred CCCEEEECCc
Confidence 7899996655
No 499
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=67.16 E-value=34 Score=25.42 Aligned_cols=47 Identities=13% Similarity=0.152 Sum_probs=31.1
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHhC
Q 030935 69 FSGANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMNK 118 (169)
Q Consensus 69 ~~~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~ 118 (169)
++++++|=.|++ |.+|..+ ++.|++|++++.+. +-++.+...+...+
T Consensus 30 l~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~ 80 (279)
T 1xg5_A 30 WRDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTV--GNIEELAAECKSAG 80 (279)
T ss_dssp GTTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTT
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECCh--HHHHHHHHHHHhcC
Confidence 477889988865 4555544 44688999999883 45555555555444
No 500
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=66.80 E-value=25 Score=25.82 Aligned_cols=77 Identities=14% Similarity=0.063 Sum_probs=42.5
Q ss_pred CCeEEEECCCCCHHHHHH----HHhCCeEEEEcCCCcHHHHHHHHHHHHHhCCcceEEEEEcCCCCc--CCC------CC
Q 030935 71 GANVVELGAGTSLPGLVA----AKVGSNVTLTDDSNRIEVLKNMRRVCEMNKLNCRVMGLTWGFLDA--SIF------DL 138 (169)
Q Consensus 71 ~~~vLElGcGtGl~~l~~----a~~ga~V~~~D~~~~~~~l~~~~~n~~~n~~~~~~~~l~~~~~~~--~~~------~~ 138 (169)
++++|=.|++.| +|..+ ++.|++|++++.++ +-++.+.+.+...+..+.+...+..+... ... -.
T Consensus 2 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 2 KKVALVTGAGQG-IGKAIALRLVKDGFAVAIADYND--ATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG 78 (256)
T ss_dssp CCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 467787886544 55444 44688999999883 45555444454444444433333333211 000 12
Q ss_pred CCcEEEEcCcCC
Q 030935 139 NPNIILGADVFY 150 (169)
Q Consensus 139 ~fDlIi~sd~iy 150 (169)
++|++|.+--+.
T Consensus 79 ~id~lv~nAg~~ 90 (256)
T 1geg_A 79 GFDVIVNNAGVA 90 (256)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999765443
Done!