Query 030939
Match_columns 169
No_of_seqs 135 out of 459
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 10:35:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030939.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030939hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1th5a1 d.52.8.1 (A:154-226) N 99.9 1.4E-27 9.9E-32 168.2 5.2 72 79-158 1-73 (73)
2 d1xhja_ d.52.8.1 (A:) Nitrogen 99.9 9.7E-25 7.1E-29 158.1 9.8 71 82-159 8-81 (88)
3 d1veha_ d.52.8.1 (A:) HIRA-int 99.9 1.5E-23 1.1E-27 152.9 8.0 74 79-159 11-88 (92)
4 d1uwda_ d.52.8.2 (A:) Hypothet 97.0 0.00037 2.7E-08 49.5 5.0 74 80-158 4-81 (102)
5 d2cu6a1 d.52.8.2 (A:6-96) Hypo 96.9 0.00069 5E-08 46.7 5.5 71 82-157 2-75 (91)
6 d1q8la_ d.58.17.1 (A:) Menkes 83.3 0.75 5.5E-05 30.0 4.4 35 118-157 8-43 (84)
7 d1p6ta1 d.58.17.1 (A:1-72) Pot 82.2 0.59 4.3E-05 29.4 3.4 35 118-157 5-40 (72)
8 d1osda_ d.58.17.1 (A:) Mercuri 79.0 1.1 7.8E-05 28.2 3.8 33 120-157 4-37 (72)
9 d2ggpb1 d.58.17.1 (B:1-72) Cop 79.0 1.2 8.9E-05 27.9 4.1 33 120-157 3-36 (72)
10 d2aw0a_ d.58.17.1 (A:) Menkes 73.5 1.3 9.2E-05 27.7 3.0 33 120-157 4-37 (72)
11 d2b7ka1 c.47.1.10 (A:111-279) 69.9 0.88 6.4E-05 29.7 1.6 50 107-156 5-68 (169)
12 d1kvja_ d.58.17.1 (A:) Menkes 69.3 2.5 0.00018 26.8 3.7 33 119-156 8-41 (79)
13 d2qifa1 d.58.17.1 (A:1-69) Cop 68.8 2.4 0.00018 26.2 3.5 32 121-157 4-36 (69)
14 d1zwya1 c.51.4.3 (A:9-181) Hyp 66.5 2 0.00015 32.4 3.2 43 69-112 37-81 (173)
15 d1cpza_ d.58.17.1 (A:) Copper 66.1 3.8 0.00028 25.2 4.0 30 123-157 4-34 (68)
16 d2f0xa1 d.38.1.5 (A:3-138) Hyp 63.0 3.5 0.00025 28.2 3.7 43 83-133 3-48 (136)
17 d1p6ta2 d.58.17.1 (A:73-151) P 62.6 3 0.00022 26.5 3.1 33 120-157 3-36 (79)
18 d1u14a_ c.51.4.3 (A:) Hypothet 60.9 3 0.00022 31.3 3.3 43 69-112 37-81 (169)
19 d1t6sa1 a.4.5.60 (A:1-85) Segr 58.7 6.4 0.00047 25.5 4.3 40 80-127 35-74 (85)
20 d1sh8a_ d.38.1.5 (A:) Hypothet 54.9 9.1 0.00066 26.2 4.8 41 79-128 2-42 (153)
21 d1mwza_ d.58.17.1 (A:) Metal i 50.9 5.3 0.00039 24.8 2.7 34 119-157 3-37 (73)
22 d1urra_ d.58.10.1 (A:) Acylpho 49.2 19 0.0014 23.4 5.5 63 94-164 22-87 (97)
23 d1xcra1 d.290.1.2 (A:3-315) Hy 45.6 5.8 0.00042 32.8 2.8 53 90-145 183-237 (313)
24 d1ls1a1 a.24.13.1 (A:1-88) Sig 44.6 7.6 0.00055 26.0 2.9 21 80-100 21-42 (88)
25 d1yoca1 d.38.1.5 (A:1-145) Hyp 42.5 14 0.001 25.7 4.2 61 82-151 12-83 (145)
26 d2acya_ d.58.10.1 (A:) Acylpho 39.2 33 0.0024 22.3 5.5 58 94-159 23-83 (98)
27 d1sb6a_ d.58.17.1 (A:) Copper 38.1 12 0.00084 22.6 2.8 34 121-159 3-37 (64)
28 d1a9xa5 d.142.1.2 (A:128-402) 37.8 20 0.0015 26.8 4.8 73 74-148 122-201 (275)
29 d1loua_ d.58.14.1 (A:) Ribosom 37.0 23 0.0017 22.9 4.4 63 80-155 13-89 (97)
30 d1j8yf1 a.24.13.1 (F:3-86) Sig 36.7 11 0.00079 24.9 2.6 21 80-100 17-38 (84)
31 d1xn7a_ a.4.5.62 (A:) Hypothet 35.6 5.7 0.00042 27.0 1.0 22 109-133 44-65 (78)
32 d1wgwa_ a.24.13.1 (A:) Signal 34.3 13 0.00092 25.2 2.7 21 80-100 26-47 (99)
33 d1vc1a_ c.13.2.1 (A:) Anti-sig 31.1 56 0.0041 20.3 6.3 34 117-150 11-45 (110)
34 d2j5aa1 d.58.14.1 (A:3-108) Ri 31.0 29 0.0021 22.9 4.1 74 80-165 17-104 (106)
35 d1th8b_ c.13.2.1 (B:) Anti-sig 30.9 29 0.0021 21.9 4.0 33 114-146 6-39 (115)
36 d1iloa_ c.47.1.1 (A:) MTH985, 29.9 31 0.0023 22.4 4.1 25 122-147 3-28 (77)
37 d1o73a_ c.47.1.10 (A:) Trypare 29.3 4.7 0.00035 27.1 -0.3 30 108-137 18-48 (144)
38 d1qupa2 d.58.17.1 (A:2-73) Cop 29.3 31 0.0023 21.1 3.8 34 121-159 8-41 (72)
39 d1ulra_ d.58.10.1 (A:) Acylpho 27.1 63 0.0046 20.6 5.3 62 94-164 17-78 (87)
40 d1u6za3 c.55.1.8 (A:136-312) E 26.0 19 0.0014 24.7 2.5 17 105-122 9-25 (177)
41 d1t82a_ d.38.1.5 (A:) Putative 25.7 41 0.003 22.5 4.3 36 82-126 4-39 (143)
42 d1cjaa_ d.144.1.3 (A:) Actin-f 24.7 25 0.0018 29.2 3.4 55 103-159 76-130 (342)
43 d1j2ga2 d.96.1.4 (A:159-312) U 23.9 1.1E+02 0.0078 22.2 6.6 78 46-157 34-115 (154)
44 d1vqza1 d.224.1.3 (A:242-329) 23.8 57 0.0041 20.9 4.5 26 108-133 15-42 (88)
45 d1qxoa_ d.258.1.1 (A:) Chorism 23.5 1.2E+02 0.0084 24.9 7.5 61 81-159 195-261 (388)
46 d1qlwa_ c.69.1.15 (A:) A novel 23.2 68 0.005 21.7 5.1 43 92-147 267-316 (318)
47 d1jdqa_ d.68.3.3 (A:) Hypothet 22.8 19 0.0014 23.8 1.9 40 122-164 28-68 (98)
48 d1fe0a_ d.58.17.1 (A:) ATX1 me 22.4 34 0.0024 20.8 2.9 32 120-157 2-33 (66)
49 d2vjva1 d.58.57.1 (A:6-130) IS 21.3 1.1E+02 0.0082 20.5 7.6 62 84-152 29-95 (125)
50 d1um0a_ d.258.1.1 (A:) Chorism 20.8 88 0.0064 25.5 6.1 26 134-160 227-252 (365)
51 d2ch5a2 c.55.1.5 (A:1-117) N-a 20.2 21 0.0015 23.5 1.6 68 74-157 33-105 (117)
No 1
>d1th5a1 d.52.8.1 (A:154-226) NifU-like protein 1, NIFUL1 {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.93 E-value=1.4e-27 Score=168.19 Aligned_cols=72 Identities=33% Similarity=0.473 Sum_probs=69.0
Q ss_pred ccccHHHHHHHHHHHHHHHh-hccccCcCCcccEEEEEecCCeEEEEEeecCCCchhhHHHHHHHHHHHhCCCceEEEec
Q 030939 79 LDLTEDNVRQVIADARGELA-QLFDTSVGITGVAELAELDGPFVKIRLRGRFWHKRSTVIARLANYLKQRIPEILEVDIE 157 (169)
Q Consensus 79 l~LteE~Ve~VLeeiRP~L~-~Df~~~vGiGGDVELVdvdgg~VkVrL~GaC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~ 157 (169)
|+|++|+|+++|+++||+|+ .| ||||||++++||+|+|||+|+|++| +|++.+||+.|++++|||..|++.
T Consensus 1 mel~ee~V~~vL~eirP~l~a~d-------GGdvelv~i~~~~v~v~l~GaC~gC-~Tl~~gIe~~L~~~iPei~~V~~v 72 (73)
T d1th5a1 1 LELNEENVEKVLNEIRPYLAGTG-------GGGLQFLMIKGPIVKVRLTGPAAVV-RTVRIAVSKKLREKIPSIQIVQLL 72 (73)
T ss_dssp CCCSHHHHHHHHTTTHHHHTTTT-------CCCCCCCEEETTEEEECCCSSSSSS-SSHHHHHHHHHHHHCTTCSEEEEC
T ss_pred CCCCHHHHHHHHHHhcccccccC-------CceEEEEEecCCEEEEEecCCCccc-chHHHHHHHHHHHHCCCccEEEec
Confidence 68999999999999999998 59 9999999999999999999999999 699999999999999999999987
Q ss_pred C
Q 030939 158 D 158 (169)
Q Consensus 158 d 158 (169)
+
T Consensus 73 ~ 73 (73)
T d1th5a1 73 S 73 (73)
T ss_dssp C
T ss_pred C
Confidence 5
No 2
>d1xhja_ d.52.8.1 (A:) Nitrogen fixation protein NifU homolog SE0630 {Staphylococcus epidermidis [TaxId: 1282]}
Probab=99.91 E-value=9.7e-25 Score=158.09 Aligned_cols=71 Identities=25% Similarity=0.288 Sum_probs=67.8
Q ss_pred cHHHHHHHHHHHHHHHhhccccCcCCcccEEEEEecCCeEEEEEeecCCCch---hhHHHHHHHHHHHhCCCceEEEecC
Q 030939 82 TEDNVRQVIADARGELAQLFDTSVGITGVAELAELDGPFVKIRLRGRFWHKR---STVIARLANYLKQRIPEILEVDIED 158 (169)
Q Consensus 82 teE~Ve~VLeeiRP~L~~Df~~~vGiGGDVELVdvdgg~VkVrL~GaC~~Cp---~Tlk~gIE~~Lke~IPEI~~V~i~d 158 (169)
+.++|+++||+|||+|++| ||||||++++++.|+|||+|+|.+|| +|++++||+.|++++||+++|+.+.
T Consensus 8 l~~~I~~vLe~IRP~l~~d-------GGdvelv~v~~g~V~v~l~GaC~gC~~s~~Tlk~~Ie~~L~~~vpev~~V~~V~ 80 (88)
T d1xhja_ 8 MFDQVAEVIERLRPFLLRD-------GGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEVEQVF 80 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHH-------SCEEEEEECCSSEEEEEEESSCCSSCHHHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred HHHHHHHHHHHhhHHHHhC-------CCcEEEEeccCCEEEEEecCCCCCCccHHHHHHHHHHHHHHHHCCCCceEEEec
Confidence 5899999999999999999 99999999999999999999999999 8999999999999999999999764
Q ss_pred C
Q 030939 159 E 159 (169)
Q Consensus 159 ~ 159 (169)
.
T Consensus 81 ~ 81 (88)
T d1xhja_ 81 L 81 (88)
T ss_dssp C
T ss_pred C
Confidence 3
No 3
>d1veha_ d.52.8.1 (A:) HIRA-interacting protein 5, HIRIP5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.88 E-value=1.5e-23 Score=152.90 Aligned_cols=74 Identities=18% Similarity=0.224 Sum_probs=68.4
Q ss_pred ccccHHHHHHHHHH-HHHHHhhccccCcCCcccEEEEEecCCeEEEEEeecCCCch---hhHHHHHHHHHHHhCCCceEE
Q 030939 79 LDLTEDNVRQVIAD-ARGELAQLFDTSVGITGVAELAELDGPFVKIRLRGRFWHKR---STVIARLANYLKQRIPEILEV 154 (169)
Q Consensus 79 l~LteE~Ve~VLee-iRP~L~~Df~~~vGiGGDVELVdvdgg~VkVrL~GaC~~Cp---~Tlk~gIE~~Lke~IPEI~~V 154 (169)
-+-..++|+++|++ |||+|++| ||||+|++++++.|+|+|+|+|.+|| +||+.+||+.|++++|||+.|
T Consensus 11 d~e~~~~I~~vL~~~IrP~l~~d-------GGdv~lv~v~~g~V~v~l~GaC~gCp~s~~Tlk~~Ie~~L~~~vpev~~V 83 (92)
T d1veha_ 11 DDEVVAMIKELLDTRIRPTVQED-------GGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEGV 83 (92)
T ss_dssp CCHHHHHHHHHHHHTTHHHHHHH-------SCCCCEEEEETTEEEECCCCCCCCCHHHHHHTHHHHHHHHHHHCSSCCCE
T ss_pred cHHHHHHHHHHHHHhcChHHHHc-------CCceEEEEeeCCeEEEEEccCCCCChhHHHHHHHHHHHHHHHHCCCcceE
Confidence 34467899999985 99999999 99999999999999999999999999 899999999999999999999
Q ss_pred EecCC
Q 030939 155 DIEDE 159 (169)
Q Consensus 155 ~i~d~ 159 (169)
+.++.
T Consensus 84 ~~v~~ 88 (92)
T d1veha_ 84 EQVSG 88 (92)
T ss_dssp EECSC
T ss_pred EEcCC
Confidence 87654
No 4
>d1uwda_ d.52.8.2 (A:) Hypothetical protein TM0487 {Thermotoga maritima [TaxId: 2336]}
Probab=97.04 E-value=0.00037 Score=49.50 Aligned_cols=74 Identities=18% Similarity=0.188 Sum_probs=58.6
Q ss_pred cccHHHHHHHHHHH-HHHHhhccccCcCCcccEEEEEecC-CeEEEEEeecCCCch--hhHHHHHHHHHHHhCCCceEEE
Q 030939 80 DLTEDNVRQVIADA-RGELAQLFDTSVGITGVAELAELDG-PFVKIRLRGRFWHKR--STVIARLANYLKQRIPEILEVD 155 (169)
Q Consensus 80 ~LteE~Ve~VLeei-RP~L~~Df~~~vGiGGDVELVdvdg-g~VkVrL~GaC~~Cp--~Tlk~gIE~~Lke~IPEI~~V~ 155 (169)
++|+++|.++|..+ =|++..| =.+.| =|.=|.|++ |.|+|.|+=.+.+|| ..+...++++|+ ++|+|.+|+
T Consensus 4 ~vt~~~V~~aL~~V~DPe~~~d-IV~LG---lV~~i~I~~~g~V~v~~~lt~~~Cp~~~~i~~~i~~al~-~~~gV~~v~ 78 (102)
T d1uwda_ 4 KVTKEDVLNALKNVIDFELGLD-VVSLG---LVYDIQIDDQNNVKVLMTMTTPMCPLAGMILSDAEEAIK-KIEGVNNVE 78 (102)
T ss_dssp CCCHHHHHHHHTTCBCTTTSSB-TTTTT---CCCCEEECTTCEEEEEECCSSSCCSSHHHHHHHHHHHHH-TSSSCCEEE
T ss_pred ccCHHHHHHHHhCCCCCCCCcc-eeecc---ceeeEEeccccceEEEEecCCCCCchHHHHHHHHHHHHH-cCCCCceEE
Confidence 57899999999886 7888766 12333 344456776 799999999999999 688999999999 599998887
Q ss_pred ecC
Q 030939 156 IED 158 (169)
Q Consensus 156 i~d 158 (169)
++=
T Consensus 79 V~i 81 (102)
T d1uwda_ 79 VEL 81 (102)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 5
>d2cu6a1 d.52.8.2 (A:6-96) Hypothetical protein TTHB138 {Thermus thermophilus [TaxId: 274]}
Probab=96.93 E-value=0.00069 Score=46.69 Aligned_cols=71 Identities=17% Similarity=0.156 Sum_probs=57.5
Q ss_pred cHHHHHHHHHHH-HHHHhhccccCcCCcccEEEEEecCCeEEEEEeecCCCch--hhHHHHHHHHHHHhCCCceEEEec
Q 030939 82 TEDNVRQVIADA-RGELAQLFDTSVGITGVAELAELDGPFVKIRLRGRFWHKR--STVIARLANYLKQRIPEILEVDIE 157 (169)
Q Consensus 82 teE~Ve~VLeei-RP~L~~Df~~~vGiGGDVELVdvdgg~VkVrL~GaC~~Cp--~Tlk~gIE~~Lke~IPEI~~V~i~ 157 (169)
++++|.++|..+ =|.+..| =.+ =|=|.=++++++.|+|.|.=...+|| ..+...++++|+ .+|++.+|++.
T Consensus 2 le~~v~eaL~~V~DPe~~~d-Iv~---LGlV~~i~i~~~~v~v~l~lt~~~cp~~~~i~~~i~~al~-~l~gv~~V~V~ 75 (91)
T d2cu6a1 2 LEAQAWALLEAVYDPELGLD-VVN---LGLIYDLVVEPPRAYVRMTLTTPGCPLHDSLGEAVRQALS-RLPGVEEVEVE 75 (91)
T ss_dssp HHHHHHHHHTTCEETTTTEE-TTT---TTCEEEEEEETTEEEEEECCSSSSCCSSCHHHHHHHHHHH-TSTTCCEEEEE
T ss_pred hHHHHHHHHhcCCCCCCCcC-hhh---ccceeEEEEeccccEEEEEcCCCCCcHHHHHHHHHHHHHH-cCCCCceEEEE
Confidence 378888888876 7877766 112 35677788899999999999999999 788889999997 59999888764
No 6
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.35 E-value=0.75 Score=30.04 Aligned_cols=35 Identities=11% Similarity=0.286 Sum_probs=26.8
Q ss_pred CCeEEEEEee-cCCCchhhHHHHHHHHHHHhCCCceEEEec
Q 030939 118 GPFVKIRLRG-RFWHKRSTVIARLANYLKQRIPEILEVDIE 157 (169)
Q Consensus 118 gg~VkVrL~G-aC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~ 157 (169)
+..|.+++.| .|.+|..+++ +.|+ ++|+|..|.+.
T Consensus 8 ~~~v~l~V~GMtC~~C~~~Ie----~~l~-~~~GV~~v~vn 43 (84)
T d1q8la_ 8 EVVLKMKVEGMTCHSCTSTIE----GKIG-KLQGVQRIKVS 43 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHH----HHHH-TCTTEEEEEEC
T ss_pred CEEEEEEECCeEcHHHHHHHH----HHHh-cCCCceEEEEE
Confidence 3567889999 8999997655 4444 59999988874
No 7
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=82.22 E-value=0.59 Score=29.35 Aligned_cols=35 Identities=11% Similarity=0.264 Sum_probs=26.7
Q ss_pred CCeEEEEEee-cCCCchhhHHHHHHHHHHHhCCCceEEEec
Q 030939 118 GPFVKIRLRG-RFWHKRSTVIARLANYLKQRIPEILEVDIE 157 (169)
Q Consensus 118 gg~VkVrL~G-aC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~ 157 (169)
...+.+++.| .|.+|..++. +.|++ +|+|.+|.+.
T Consensus 5 ~~~~~l~V~Gm~C~~C~~~Ie----~~l~~-~~gV~~v~v~ 40 (72)
T d1p6ta1 5 QKEIAMQVSGMTCAACAARIE----KGLKR-MPGVTDANVN 40 (72)
T ss_dssp CEEEEEEEESCCSSHHHHHHH----HHHTT-SSSEEEEEEE
T ss_pred ceEEEEEECCeecHHHHHHHH----HHHHc-CCCcEEEEEE
Confidence 3568899999 8999987655 55554 7999988764
No 8
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=79.02 E-value=1.1 Score=28.21 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=25.2
Q ss_pred eEEEEEee-cCCCchhhHHHHHHHHHHHhCCCceEEEec
Q 030939 120 FVKIRLRG-RFWHKRSTVIARLANYLKQRIPEILEVDIE 157 (169)
Q Consensus 120 ~VkVrL~G-aC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~ 157 (169)
.+.+++.| .|++|...++ +.|++ +|+|..|.+.
T Consensus 4 t~~l~V~Gm~C~~C~~~Ie----~~l~~-~~gV~~v~v~ 37 (72)
T d1osda_ 4 TVTLSVPGMTCSACPITVK----KAISK-VEGVSKVDVT 37 (72)
T ss_dssp EEEEECTTCCSTTHHHHHH----HHHHT-STTEEEEEEE
T ss_pred EEEEEECCcccHHHHHHHH----HHHHc-CCCcEEEEEE
Confidence 57788888 8999987655 55554 9999988874
No 9
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=78.97 E-value=1.2 Score=27.94 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=25.0
Q ss_pred eEEEEEee-cCCCchhhHHHHHHHHHHHhCCCceEEEec
Q 030939 120 FVKIRLRG-RFWHKRSTVIARLANYLKQRIPEILEVDIE 157 (169)
Q Consensus 120 ~VkVrL~G-aC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~ 157 (169)
.+.+++.| .|.+|..++. +.|+ ++|+|.+|.+.
T Consensus 3 ~v~l~V~GM~C~~C~~~Ie----~~l~-~~~gV~~v~V~ 36 (72)
T d2ggpb1 3 EVILAVHGMTCSACTNTIN----TQLR-ALKGVTKCDIS 36 (72)
T ss_dssp EEEEECTTCCSSTTTHHHH----HHHT-TSTTEEEEEEC
T ss_pred EEEEEECCcccHHHHHHHH----HHHh-cCCCceEEEEE
Confidence 57788898 6999997655 4444 47999888764
No 10
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.52 E-value=1.3 Score=27.70 Aligned_cols=33 Identities=9% Similarity=0.164 Sum_probs=24.5
Q ss_pred eEEEEEee-cCCCchhhHHHHHHHHHHHhCCCceEEEec
Q 030939 120 FVKIRLRG-RFWHKRSTVIARLANYLKQRIPEILEVDIE 157 (169)
Q Consensus 120 ~VkVrL~G-aC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~ 157 (169)
...+++.| .|++|..+++ +.|++ +|+|.+|.+.
T Consensus 4 ~~~l~V~GM~C~~C~~~Ie----~~l~~-~~GV~~v~v~ 37 (72)
T d2aw0a_ 4 ETVINIDGMTCNSCVQSIE----GVISK-KPGVKSIRVS 37 (72)
T ss_dssp EEEEEEECCCSHHHHHHHH----HHHHT-STTCCCEEEE
T ss_pred EEEEEECCcccHHHHHHHH----HHHhc-CCCcEEEEEE
Confidence 36788899 8999986554 55655 7999888763
No 11
>d2b7ka1 c.47.1.10 (A:111-279) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Baker's yeast(Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=69.87 E-value=0.88 Score=29.74 Aligned_cols=50 Identities=16% Similarity=0.084 Sum_probs=25.8
Q ss_pred CcccEEEEEecCCeEEEE-Eeec----------CC-Cch--hhHHHHHHHHHHHhCCCceEEEe
Q 030939 107 ITGVAELAELDGPFVKIR-LRGR----------FW-HKR--STVIARLANYLKQRIPEILEVDI 156 (169)
Q Consensus 107 iGGDVELVdvdgg~VkVr-L~Ga----------C~-~Cp--~Tlk~gIE~~Lke~IPEI~~V~i 156 (169)
||||-+|.|.+|..|..+ ++|. |. .|+ ......+.....+.-..+..+..
T Consensus 5 ~g~dF~l~d~~G~~vsl~~~~GK~vli~f~~t~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (169)
T d2b7ka1 5 LGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLF 68 (169)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_pred cCCCeEEEeCCCCEECHHHHCCCEEEEEEeccccCCcccchhhhhhhhhhhccccccccceeee
Confidence 468888888776555433 3332 43 333 22223344555555555555544
No 12
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.28 E-value=2.5 Score=26.84 Aligned_cols=33 Identities=12% Similarity=0.159 Sum_probs=25.6
Q ss_pred CeEEEEEee-cCCCchhhHHHHHHHHHHHhCCCceEEEe
Q 030939 119 PFVKIRLRG-RFWHKRSTVIARLANYLKQRIPEILEVDI 156 (169)
Q Consensus 119 g~VkVrL~G-aC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i 156 (169)
..+++.+.| .|++|..+++ +.|+ ++|+|..|++
T Consensus 8 ~~~~l~V~gm~C~~C~~~ie----~~l~-~~~gv~~v~v 41 (79)
T d1kvja_ 8 NSVTISVEGMTCNSCVWTIE----QQIG-KVNGVHHIKV 41 (79)
T ss_dssp EEEEEEEESCCSTHHHHHHH----HHHH-TTTTCSEEEE
T ss_pred eEEEEEECCeecHHHHHHHH----HHHh-cCCCceEEEE
Confidence 568889999 4999986554 6666 5899998876
No 13
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=68.83 E-value=2.4 Score=26.16 Aligned_cols=32 Identities=9% Similarity=0.237 Sum_probs=24.0
Q ss_pred EEEEEee-cCCCchhhHHHHHHHHHHHhCCCceEEEec
Q 030939 121 VKIRLRG-RFWHKRSTVIARLANYLKQRIPEILEVDIE 157 (169)
Q Consensus 121 VkVrL~G-aC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~ 157 (169)
..+++.| .|.+|... ||+.|++ +|+|.+|.+.
T Consensus 4 ~tl~V~Gm~C~~C~~~----Ie~~l~~-~~GV~~v~v~ 36 (69)
T d2qifa1 4 KTLQVEGMSCQHCVKA----VETSVGE-LDGVSAVHVN 36 (69)
T ss_dssp EEEEEECCCSHHHHHH----HHHHHHT-STTEEEEEEE
T ss_pred EEEEECCccCHHHHHH----HHHHHhc-CCCceEEEEE
Confidence 4577888 78888754 5566766 8999998874
No 14
>d1zwya1 c.51.4.3 (A:9-181) Hypothetical protein VC0702 {Vibrio cholerae [TaxId: 666]}
Probab=66.53 E-value=2 Score=32.39 Aligned_cols=43 Identities=16% Similarity=0.222 Sum_probs=34.6
Q ss_pred cccCCCCCCCccccHHHHHHHHHHHHHHHhh--ccccCcCCcccEE
Q 030939 69 TAAGGVPPPPLDLTEDNVRQVIADARGELAQ--LFDTSVGITGVAE 112 (169)
Q Consensus 69 ~~~~~~~~~~l~LteE~Ve~VLeeiRP~L~~--Df~~~vGiGGDVE 112 (169)
.+.++++++|+-+ +|.++.+++..+-+++. |-|.+|||-|.|+
T Consensus 37 ~v~SgV~~QP~g~-eET~~GA~NRA~~A~~~~~~ad~gVGiEgGv~ 81 (173)
T d1zwya1 37 SVPSEVADQPMSD-EETKQGALNRVRNAKQRHPGAEYYVGLEAGIE 81 (173)
T ss_dssp CCCCSSCSSCCSH-HHHHHHHHHHHHHHHHHSTTCSEEEEEEEEEE
T ss_pred ccCCCCCCCCCCH-HHHHHHHHHHHHHHHHhCCCCCEEEEEeeeEe
Confidence 3567888888863 88999999999888865 4678999988875
No 15
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=66.11 E-value=3.8 Score=25.20 Aligned_cols=30 Identities=17% Similarity=0.301 Sum_probs=22.0
Q ss_pred EEEeec-CCCchhhHHHHHHHHHHHhCCCceEEEec
Q 030939 123 IRLRGR-FWHKRSTVIARLANYLKQRIPEILEVDIE 157 (169)
Q Consensus 123 VrL~Ga-C~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~ 157 (169)
+++.|. |.+|..+++ +.|+ ++|+|..|.+.
T Consensus 4 l~V~GM~C~~C~~~Ie----~~l~-~~~GV~~v~V~ 34 (68)
T d1cpza_ 4 FSVKGMSCNHCVARIE----EAVG-RISGVKKVKVQ 34 (68)
T ss_dssp EEESCCCSSSHHHHHH----HHHH-TSTTEEEEEEE
T ss_pred EEECCeEcHHHHHHHH----HHHh-cCCCcEEEEEE
Confidence 466774 999987655 5555 48999988874
No 16
>d2f0xa1 d.38.1.5 (A:3-138) Hypothetical protein Them2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.99 E-value=3.5 Score=28.24 Aligned_cols=43 Identities=19% Similarity=0.142 Sum_probs=29.2
Q ss_pred HHHHHHHHHHH---HHHHhhccccCcCCcccEEEEEecCCeEEEEEeecCCCch
Q 030939 83 EDNVRQVIADA---RGELAQLFDTSVGITGVAELAELDGPFVKIRLRGRFWHKR 133 (169)
Q Consensus 83 eE~Ve~VLeei---RP~L~~Df~~~vGiGGDVELVdvdgg~VkVrL~GaC~~Cp 133 (169)
.|++++.++.+ +|+. +. =|+++++++++|.+.+++.-.=.+|-
T Consensus 3 ~~~~~e~~~~~~~~~~f~-~~-------lg~i~~~~~~~g~~~~~~~v~~~~~n 48 (136)
T d2f0xa1 3 TQSLREVIKAMTKARNFE-RV-------LGKITLVSAAPGKVICEMKVEEEHTN 48 (136)
T ss_dssp HHHHHHHHHHHHHCSSGG-GG-------GTTCEEEEEETTEEEEEEECCGGGBC
T ss_pred hHHHHHHHHHhhccCCHH-HH-------hCCEEEEEEcCCEEEEEEEcCHHHcC
Confidence 45666666654 3433 33 35699999999999999976655554
No 17
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=62.58 E-value=3 Score=26.46 Aligned_cols=33 Identities=9% Similarity=0.166 Sum_probs=23.8
Q ss_pred eEEEEEee-cCCCchhhHHHHHHHHHHHhCCCceEEEec
Q 030939 120 FVKIRLRG-RFWHKRSTVIARLANYLKQRIPEILEVDIE 157 (169)
Q Consensus 120 ~VkVrL~G-aC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~ 157 (169)
.+.+++.| .|.+|..+++ +.|+ .+|+|..|.+.
T Consensus 3 k~~~~V~Gm~C~~C~~~Ie----~~l~-~~~gV~~v~v~ 36 (79)
T d1p6ta2 3 KAEFDIEGMTCAACANRIE----KRLN-KIEGVANAPVN 36 (79)
T ss_dssp EEEEEESSCCSSSHHHHHH----HHHT-TSSSEEECCEE
T ss_pred EEEEEECCcccHHHHHHHH----HHHh-cCCCcEEEEEE
Confidence 35678888 8999987665 4443 48999887653
No 18
>d1u14a_ c.51.4.3 (A:) Hypothetical protein YjjX {Salmonella typhimurium [TaxId: 90371]}
Probab=60.94 E-value=3 Score=31.29 Aligned_cols=43 Identities=19% Similarity=0.187 Sum_probs=34.6
Q ss_pred cccCCCCCCCccccHHHHHHHHHHHHHHHhh--ccccCcCCcccEE
Q 030939 69 TAAGGVPPPPLDLTEDNVRQVIADARGELAQ--LFDTSVGITGVAE 112 (169)
Q Consensus 69 ~~~~~~~~~~l~LteE~Ve~VLeeiRP~L~~--Df~~~vGiGGDVE 112 (169)
.+.++++++|+-+ +|.++.+++..+-+++. |-|.+|||-|.|+
T Consensus 37 ~v~SgV~~QP~g~-eET~~GA~NRA~~A~~~~~~ad~gVGiEgGv~ 81 (169)
T d1u14a_ 37 AVESGVPEQPFGS-EETRAGARNRVDNARRLHPQADFWVAIEAGID 81 (169)
T ss_dssp CCCCSSCSSCBSH-HHHHHHHHHHHHHHHHHSTTCSEEEEEEEEEE
T ss_pred cCCCCCCCCCCCH-HHHHHHHHHHHHHHHhcCCCCCEEEEeeccCc
Confidence 4668888888863 88899999999888873 5678899988764
No 19
>d1t6sa1 a.4.5.60 (A:1-85) Segregation and condensation protein B, ScpB {Chlorobium tepidum [TaxId: 1097]}
Probab=58.67 E-value=6.4 Score=25.49 Aligned_cols=40 Identities=5% Similarity=0.214 Sum_probs=28.1
Q ss_pred cccHHHHHHHHHHHHHHHhhccccCcCCcccEEEEEecCCeEEEEEee
Q 030939 80 DLTEDNVRQVIADARGELAQLFDTSVGITGVAELAELDGPFVKIRLRG 127 (169)
Q Consensus 80 ~LteE~Ve~VLeeiRP~L~~Df~~~vGiGGDVELVdvdgg~VkVrL~G 127 (169)
+++.++|+++|+++.-.+... +..+|++++.||. ++..+.
T Consensus 35 ~~~~~~i~~~l~~L~~~y~~~-------~~g~el~~~~~gy-~~~tk~ 74 (85)
T d1t6sa1 35 KFTPSELQEAVDELNRDYEAT-------GRTFRIHAIAGGY-RFLTEP 74 (85)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH-------TCSEEEEEETTEE-EEEECG
T ss_pred CCCHHHHHHHHHHHHHHHhcC-------CCcEEEEEECCEE-EEEEhH
Confidence 456788999999985555555 5669999998753 333433
No 20
>d1sh8a_ d.38.1.5 (A:) Hypothetical protein PA5026 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=54.86 E-value=9.1 Score=26.18 Aligned_cols=41 Identities=15% Similarity=0.273 Sum_probs=32.1
Q ss_pred ccccHHHHHHHHHHHHHHHhhccccCcCCcccEEEEEecCCeEEEEEeec
Q 030939 79 LDLTEDNVRQVIADARGELAQLFDTSVGITGVAELAELDGPFVKIRLRGR 128 (169)
Q Consensus 79 l~LteE~Ve~VLeeiRP~L~~Df~~~vGiGGDVELVdvdgg~VkVrL~Ga 128 (169)
|.+..|.+++..++-=|+.+.. .+++.++++|.+.++|.=.
T Consensus 2 mp~p~e~~~~l~~~~~pf~~~~---------Gi~v~~~~~g~~~l~~p~~ 42 (153)
T d1sh8a_ 2 MPLPTELARHLTEEKIAFVQRS---------GLRAEVLEPGYVRLRMPGA 42 (153)
T ss_dssp CSSCHHHHHHHHHHSSHHHHHH---------TCEEEEEETTEEEEEECST
T ss_pred CCchHHHHHHHHHccChHHHHc---------CcEEEEEeCCEEEEEEEcc
Confidence 4466777777777656999988 3899999999999988643
No 21
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=50.94 E-value=5.3 Score=24.81 Aligned_cols=34 Identities=12% Similarity=0.152 Sum_probs=24.8
Q ss_pred CeEEEEEee-cCCCchhhHHHHHHHHHHHhCCCceEEEec
Q 030939 119 PFVKIRLRG-RFWHKRSTVIARLANYLKQRIPEILEVDIE 157 (169)
Q Consensus 119 g~VkVrL~G-aC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~ 157 (169)
....+++.| .|.+|..+ ||+.|++ +|+|..|.+.
T Consensus 3 ~k~~~~V~Gm~C~~C~~~----Ie~~l~~-~~gV~~v~v~ 37 (73)
T d1mwza_ 3 TRYSWKVSGMDCAACARK----VENAVRQ-LAGVNQVQVL 37 (73)
T ss_dssp CCEEEECTTCCSHHHHHH----HHHHHHT-SSSEEEEEEE
T ss_pred CEEEEEECCcCCHHHHHH----HHHHHhc-CCCceEEEEE
Confidence 456677888 49999765 4466665 6999998874
No 22
>d1urra_ d.58.10.1 (A:) Acylphosphatase 2 (Cg18505) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=49.16 E-value=19 Score=23.40 Aligned_cols=63 Identities=13% Similarity=0.258 Sum_probs=38.8
Q ss_pred HHHHhhccccCcCCcccEEEEEecCCeEEEEEeecCCCchhhHHHHHHHHHHHhCC---CceEEEecCCcccCC
Q 030939 94 RGELAQLFDTSVGITGVAELAELDGPFVKIRLRGRFWHKRSTVIARLANYLKQRIP---EILEVDIEDEKQLDD 164 (169)
Q Consensus 94 RP~L~~Df~~~vGiGGDVELVdvdgg~VkVrL~GaC~~Cp~Tlk~gIE~~Lke~IP---EI~~V~i~d~~ql~d 164 (169)
||+.++. -...||.|-|. ...||.|.+.++|. +..+.. .-.+|++.-| .|.+|++.+.+.+.+
T Consensus 22 R~~~~~~-A~~l~l~G~V~--N~~dG~Vei~~qG~----~~~i~~-f~~~l~~~~p~~a~V~~i~~~~~~~~~~ 87 (97)
T d1urra_ 22 RKHTSHE-AKRLGVRGWCM--NTRDGTVKGQLEAP----MMNLME-MKHWLENNRIPNAKVSKAEFSQIQEIED 87 (97)
T ss_dssp HHHHHHH-HHHHTCEEEEE--ECTTSCEEEEEEEC----HHHHHH-HHHHHHHCCSTTCEEEEEEECCCEEESS
T ss_pred hHHHHHH-HHHcCCEEEEE--ECCCCCEEEEEEcC----HHHHHH-HHHHHhhCCCCCcEEEEEEEEEccccCC
Confidence 4444433 23467888754 46789999999997 344443 4466666555 366677666655554
No 23
>d1xcra1 d.290.1.2 (A:3-315) Hypothetical protein PTD012 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.61 E-value=5.8 Score=32.80 Aligned_cols=53 Identities=15% Similarity=0.212 Sum_probs=40.2
Q ss_pred HHHHHHHHhhccc-cCcCCcccEEEEEecCCeEEEEEee-cCCCchhhHHHHHHHHHH
Q 030939 90 IADARGELAQLFD-TSVGITGVAELAELDGPFVKIRLRG-RFWHKRSTVIARLANYLK 145 (169)
Q Consensus 90 LeeiRP~L~~Df~-~~vGiGGDVELVdvdgg~VkVrL~G-aC~~Cp~Tlk~gIE~~Lk 145 (169)
++.||-.|.++|| .+||+||-. -|..|.++...+- -+..||..-..-+.+||+
T Consensus 183 ~~~iR~~L~~~~g~~~v~LgGvF---~i~~GK~k~HVmP~dfs~~p~~~~~~v~~wL~ 237 (313)
T d1xcra1 183 VTCMRETLEKHYGNKPIGMGGTF---IIQKGKVKSHIMPAEFSSCPLNSDEEVNKWLH 237 (313)
T ss_dssp HHHHHHHHHHHHTTSCCEEEEEE---EEEESEEEEEECCSSCCSSCCCSHHHHHHHSE
T ss_pred HHHHHHHHHHhcCCCceeeeeEE---EEecCceeecccCCccCcCCCCCHHHHHHHHh
Confidence 3567777888875 679999954 4578999999995 799999544445677775
No 24
>d1ls1a1 a.24.13.1 (A:1-88) Signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=44.58 E-value=7.6 Score=25.98 Aligned_cols=21 Identities=14% Similarity=0.360 Sum_probs=18.4
Q ss_pred cccHHHHHHHHHHH-HHHHhhc
Q 030939 80 DLTEDNVRQVIADA-RGELAQL 100 (169)
Q Consensus 80 ~LteE~Ve~VLeei-RP~L~~D 100 (169)
.++|++|+++|.+| |-.|.+|
T Consensus 21 ~i~E~~i~~~l~eir~ALLeAD 42 (88)
T d1ls1a1 21 RITEEDLKATLREIRRALMDAD 42 (88)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHcc
Confidence 57999999999999 6777788
No 25
>d1yoca1 d.38.1.5 (A:1-145) Hypothetical protein PA1835 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=42.53 E-value=14 Score=25.67 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=41.8
Q ss_pred cHHHHHHHHHHHHHHHhhccccCcCCcccEEEEEecCCeEEEEEeecCCCch----------hhHHHHHH-HHHHHhCCC
Q 030939 82 TEDNVRQVIADARGELAQLFDTSVGITGVAELAELDGPFVKIRLRGRFWHKR----------STVIARLA-NYLKQRIPE 150 (169)
Q Consensus 82 teE~Ve~VLeeiRP~L~~Df~~~vGiGGDVELVdvdgg~VkVrL~GaC~~Cp----------~Tlk~gIE-~~Lke~IPE 150 (169)
..+.+.+.+...-||.+.. ++++.++++|.+.++|.=.=.++- .|+-+... -++...+|+
T Consensus 12 ~~~~~~~~~~~~~P~~~~l---------g~~v~~~~~g~~~~~lp~~~~~~N~~g~~HGG~l~tlaD~a~g~a~~~~~~~ 82 (145)
T d1yoca1 12 GPAQFSAMIGQFAPYFASI---------APQFVELRPGYAEVTFPKRREVLNHIGTVHAIALCNAAELAAGTMTDASIPA 82 (145)
T ss_dssp HHHHHHHHHHHHSGGGGGG---------CCEEEEEETTEEEEEECCCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHSCT
T ss_pred hHHHHHHHHhhhCChhhhc---------CcEEEEEECCEEEEEEEccHHHhCCCCcEeHHHHHHHHHHHHHHHHhhhCCc
Confidence 4567788888889999988 589999999999999874322222 45544433 235556665
Q ss_pred c
Q 030939 151 I 151 (169)
Q Consensus 151 I 151 (169)
-
T Consensus 83 ~ 83 (145)
T d1yoca1 83 G 83 (145)
T ss_dssp T
T ss_pred c
Confidence 3
No 26
>d2acya_ d.58.10.1 (A:) Acylphosphatase {Cow (Bos taurus) [TaxId: 9913]}
Probab=39.19 E-value=33 Score=22.35 Aligned_cols=58 Identities=19% Similarity=0.247 Sum_probs=35.0
Q ss_pred HHHHhhccccCcCCcccEEEEEecCCeEEEEEeecCCCchhhHHHHHHHHHHHhCCCc---eEEEecCC
Q 030939 94 RGELAQLFDTSVGITGVAELAELDGPFVKIRLRGRFWHKRSTVIARLANYLKQRIPEI---LEVDIEDE 159 (169)
Q Consensus 94 RP~L~~Df~~~vGiGGDVELVdvdgg~VkVrL~GaC~~Cp~Tlk~gIE~~Lke~IPEI---~~V~i~d~ 159 (169)
|+++++. -...||.|-|. ..++|.|.+.++|. ...+. -..++|+..-|.- ..|++.+.
T Consensus 23 R~~v~~~-A~~l~L~G~V~--N~~dG~Vei~~qG~----~~~i~-~f~~~l~~~gp~~a~V~~i~~~~~ 83 (98)
T d2acya_ 23 RKYTQAE-GKKLGLVGWVQ--NTDQGTVQGQLQGP----ASKVR-HMQEWLETKGSPKSHIDRASFHNE 83 (98)
T ss_dssp HHHHHHH-HHHTTCEEEEE--ECTTSCEEEEEEEE----HHHHH-HHHHHHHHTCSTTCEEEEEEEEEE
T ss_pred hHHHHHH-HHHcCCEEEEE--ECCCCeEEEEEEEC----HHHHH-HHHHHHHhcCCCCcEEEEEEEEEe
Confidence 5555544 34467888743 56789999999998 33333 3445566656653 44444433
No 27
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=38.10 E-value=12 Score=22.61 Aligned_cols=34 Identities=6% Similarity=0.025 Sum_probs=22.7
Q ss_pred EEEEEee-cCCCchhhHHHHHHHHHHHhCCCceEEEecCC
Q 030939 121 VKIRLRG-RFWHKRSTVIARLANYLKQRIPEILEVDIEDE 159 (169)
Q Consensus 121 VkVrL~G-aC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~d~ 159 (169)
+++++.| .|.+|..+++ +.|+ ++|+|.+|.+.-.
T Consensus 3 ~~l~V~gM~C~~C~~~Ie----~~l~-~~~gv~~v~v~~~ 37 (64)
T d1sb6a_ 3 IQLTVPTIACEACAEAVT----KAVQ-NEDAQATVQVDLT 37 (64)
T ss_dssp EEEECTTTTSSSCTHHHH----HHHH-HHCTTCEEEEETT
T ss_pred EEEEECCccchhHHHHHH----HHHh-cCCCeeEEEccCC
Confidence 4455554 5999987655 5555 3799998887443
No 28
>d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}
Probab=37.84 E-value=20 Score=26.80 Aligned_cols=73 Identities=11% Similarity=0.119 Sum_probs=41.5
Q ss_pred CCCCCccccHHHHHHHHHHHHHHHhhccccCcCCcccEEE-EEecCC-eEEEEEeecCCCch-hhHH----HHHHHHHHH
Q 030939 74 VPPPPLDLTEDNVRQVIADARGELAQLFDTSVGITGVAEL-AELDGP-FVKIRLRGRFWHKR-STVI----ARLANYLKQ 146 (169)
Q Consensus 74 ~~~~~l~LteE~Ve~VLeeiRP~L~~Df~~~vGiGGDVEL-Vdvdgg-~VkVrL~GaC~~Cp-~Tlk----~gIE~~Lke 146 (169)
...|+..|+++..+++.+..+-.+.+. |..+| ++.+|| ++.+++ ++.+.+.-+++.-. .|.+ ..++..++.
T Consensus 122 ~~aP~~~L~~~~~~~i~~~a~~i~~~l-g~~~G-~~~~ef~~~~~~~~~~~iE~npR~~~~~~~~~~~tgidlv~~~~~~ 199 (275)
T d1a9xa5 122 TVAPAQTLTDKEYQIMRNASMAVLREI-GVETG-GSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKL 199 (275)
T ss_dssp EEESCCSCCHHHHHHHHHHHHHHHHHH-TCCSE-EEEEEEEECTTTCCEEEEEEESSCCHHHHHHHHHHSCCHHHHHHHH
T ss_pred EEcCCCcCCHHHHHHHHHHHHHHHHHc-CceEC-ceEEEEEEeCCCCEEEEEEecCCCCceehhhhHhhCCCHHHHHHHH
Confidence 344445678888777777666555554 54455 667998 555555 55555554433222 2222 346666665
Q ss_pred hC
Q 030939 147 RI 148 (169)
Q Consensus 147 ~I 148 (169)
.+
T Consensus 200 a~ 201 (275)
T d1a9xa5 200 AV 201 (275)
T ss_dssp HT
T ss_pred Hc
Confidence 54
No 29
>d1loua_ d.58.14.1 (A:) Ribosomal protein S6 {Thermus thermophilus [TaxId: 274]}
Probab=36.96 E-value=23 Score=22.91 Aligned_cols=63 Identities=14% Similarity=0.094 Sum_probs=43.2
Q ss_pred cccHHHHHHHHHHHHHHHhhccccCcCCcccEEEEEe--------------cCCeEEEEEeecCCCchhhHHHHHHHHHH
Q 030939 80 DLTEDNVRQVIADARGELAQLFDTSVGITGVAELAEL--------------DGPFVKIRLRGRFWHKRSTVIARLANYLK 145 (169)
Q Consensus 80 ~LteE~Ve~VLeeiRP~L~~Df~~~vGiGGDVELVdv--------------dgg~VkVrL~GaC~~Cp~Tlk~gIE~~Lk 145 (169)
++++++++++++++.-.+.+. ||.|.-++- +|-.+.+.+.+. ......+++.|+
T Consensus 13 ~l~~~~~~~~~~~~~~~i~~~-------gg~i~~~e~~G~r~LAY~I~k~~~G~Y~~~~f~~~-----~~~i~el~~~l~ 80 (97)
T d1loua_ 13 NLDQSQLALEKEIIQRAAENY-------GARVEKVEELGLRRLAYPIAKDPQGYFLWYQVEMP-----EDRVNDLARELR 80 (97)
T ss_dssp TCCHHHHHHHHHHHHHHHHHT-------TCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEC-----GGGHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhC-------CCEEEEEeeeEEEeccccccccceeEEEEEEEEeC-----HHHHHHHHHHhc
Confidence 578999999999999999999 998876653 123455555544 333446777777
Q ss_pred HhCCCceEEE
Q 030939 146 QRIPEILEVD 155 (169)
Q Consensus 146 e~IPEI~~V~ 155 (169)
- =+.|.+--
T Consensus 81 l-~~~VlR~l 89 (97)
T d1loua_ 81 I-RDNVRRVM 89 (97)
T ss_dssp T-STTEEEEE
T ss_pred C-CcCeEEEE
Confidence 3 34555433
No 30
>d1j8yf1 a.24.13.1 (F:3-86) Signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=36.73 E-value=11 Score=24.89 Aligned_cols=21 Identities=10% Similarity=0.150 Sum_probs=17.7
Q ss_pred cccHHHHHHHHHHH-HHHHhhc
Q 030939 80 DLTEDNVRQVIADA-RGELAQL 100 (169)
Q Consensus 80 ~LteE~Ve~VLeei-RP~L~~D 100 (169)
.++++.|+++|.+| |-.|.+|
T Consensus 17 ~i~E~~i~~~l~eIr~ALLeAD 38 (84)
T d1j8yf1 17 SSYDKAVEDFIKELQKSLISAD 38 (84)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHhcc
Confidence 47899999999999 6666777
No 31
>d1xn7a_ a.4.5.62 (A:) Hypothetical protein YhgG {Escherichia coli [TaxId: 562]}
Probab=35.58 E-value=5.7 Score=27.00 Aligned_cols=22 Identities=18% Similarity=-0.020 Sum_probs=17.2
Q ss_pred ccEEEEEecCCeEEEEEeecCCCch
Q 030939 109 GVAELAELDGPFVKIRLRGRFWHKR 133 (169)
Q Consensus 109 GDVELVdvdgg~VkVrL~GaC~~Cp 133 (169)
|.+|=|+.|..-. |+|.|-+||
T Consensus 44 GK~erie~d~~gC---LsGsCKsCP 65 (78)
T d1xn7a_ 44 GKAVRIQEEPDGC---LSGSCKSCP 65 (78)
T ss_dssp TSEEEECCCCCCC---CCSSCCCCC
T ss_pred hcceecccccccc---ccCCCCCCC
Confidence 7888887764333 899999999
No 32
>d1wgwa_ a.24.13.1 (A:) Signal recognition particle 54 kDa protein, SRP54 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.27 E-value=13 Score=25.21 Aligned_cols=21 Identities=10% Similarity=0.154 Sum_probs=17.9
Q ss_pred cccHHHHHHHHHHH-HHHHhhc
Q 030939 80 DLTEDNVRQVIADA-RGELAQL 100 (169)
Q Consensus 80 ~LteE~Ve~VLeei-RP~L~~D 100 (169)
.++++.|+++|.+| |-.|++|
T Consensus 26 ~i~E~~I~~~l~eI~~ALLeAD 47 (99)
T d1wgwa_ 26 IINEEVLNAMLKEVCTALLEAD 47 (99)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHcc
Confidence 47999999999999 6667777
No 33
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]}
Probab=31.09 E-value=56 Score=20.27 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=25.2
Q ss_pred cCCeEEEEEeecCCCch-hhHHHHHHHHHHHhCCC
Q 030939 117 DGPFVKIRLRGRFWHKR-STVIARLANYLKQRIPE 150 (169)
Q Consensus 117 dgg~VkVrL~GaC~~Cp-~Tlk~gIE~~Lke~IPE 150 (169)
+++.+.|++.|..-... ..++..+.+.+.+.=+.
T Consensus 11 ~~~~~vv~l~G~l~~~~~~~~~~~l~~~~~~~~~~ 45 (110)
T d1vc1a_ 11 QDDKAIVRVQGDIDAYNSSELKEQLRNFISTTSKK 45 (110)
T ss_dssp ETTEEEEEEESCBSTTTHHHHHHHHHHHHHHCCCS
T ss_pred ECCEEEEEEEEEEEhHHHHHHHHHHHHHHhcCCCC
Confidence 46888899999987766 67777887777654333
No 34
>d2j5aa1 d.58.14.1 (A:3-108) Ribosomal protein S6 {Aquifex aeolicus [TaxId: 63363]}
Probab=31.02 E-value=29 Score=22.88 Aligned_cols=74 Identities=12% Similarity=0.140 Sum_probs=51.3
Q ss_pred cccHHHHHHHHHHHHHHHhhccccCcCCcccEEEEEe--------------cCCeEEEEEeecCCCchhhHHHHHHHHHH
Q 030939 80 DLTEDNVRQVIADARGELAQLFDTSVGITGVAELAEL--------------DGPFVKIRLRGRFWHKRSTVIARLANYLK 145 (169)
Q Consensus 80 ~LteE~Ve~VLeeiRP~L~~Df~~~vGiGGDVELVdv--------------dgg~VkVrL~GaC~~Cp~Tlk~gIE~~Lk 145 (169)
+++++.++++++++.-.|.+. ||.|.-++. +|..+.+.+.+. +..+..-+++.|+
T Consensus 17 ~l~~~~~~~~~~~~~~~i~~~-------gg~i~~~~~wG~r~LAY~Ikk~~~G~Y~~~~f~~~----~~~~i~el~~~l~ 85 (106)
T d2j5aa1 17 TLSEEEMKKKFEQVKEFIKQK-------GGEILYEEDWGMRQLAYPIQKFNNARYFLVQFKTE----NPQLPNELDFQLK 85 (106)
T ss_dssp TSCHHHHHHHHHHHHHHHHHT-------TEEEEEEEEEEEEECSSCSSSCSEEEEEEEEEEES----CTTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHC-------CCeEEEEecceeechhhhhhhccceEEEEEEEEEC----cHHHHHHHHHHhC
Confidence 678999999999999999999 999887763 234577777653 1334446777776
Q ss_pred HhCCCceEEEecCCcccCCC
Q 030939 146 QRIPEILEVDIEDEKQLDDS 165 (169)
Q Consensus 146 e~IPEI~~V~i~d~~ql~d~ 165 (169)
- -+.|.+--++-.++.+++
T Consensus 86 l-~~~VlR~l~vkl~~~~~~ 104 (106)
T d2j5aa1 86 I-DEDVIRWLNIQIKESEVK 104 (106)
T ss_dssp H-CTTEEEEEEEEECGGGCC
T ss_pred C-CcCeeEEEEEEecchhcc
Confidence 3 467776555444444443
No 35
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]}
Probab=30.92 E-value=29 Score=21.87 Aligned_cols=33 Identities=18% Similarity=0.355 Sum_probs=22.7
Q ss_pred EEecCCeEEEEEeecCCCch-hhHHHHHHHHHHH
Q 030939 114 AELDGPFVKIRLRGRFWHKR-STVIARLANYLKQ 146 (169)
Q Consensus 114 Vdvdgg~VkVrL~GaC~~Cp-~Tlk~gIE~~Lke 146 (169)
++.+++++.|++.|....=. ..++..+.+++.+
T Consensus 6 ~~~~~~v~vv~l~G~L~~~~~~~~~~~l~~~~~~ 39 (115)
T d1th8b_ 6 LEVKQDVLIVRLSGELDHHTAEELREQVTDVLEN 39 (115)
T ss_dssp EEEETTEEEEEEEEEESHHHHHHHHHHHHHHHHS
T ss_pred EEEECCEEEEEEEEEEEHHHHHHHHHHHHHHHhc
Confidence 45678999999999976644 4455555555543
No 36
>d1iloa_ c.47.1.1 (A:) MTH985, a thioredoxin {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=29.94 E-value=31 Score=22.36 Aligned_cols=25 Identities=16% Similarity=0.080 Sum_probs=15.7
Q ss_pred EEEEee-cCCCchhhHHHHHHHHHHHh
Q 030939 122 KIRLRG-RFWHKRSTVIARLANYLKQR 147 (169)
Q Consensus 122 kVrL~G-aC~~Cp~Tlk~gIE~~Lke~ 147 (169)
+|+..| -|..|+.+.. .+++++++.
T Consensus 3 ~IkVlg~gC~~C~~~~~-~v~~a~~e~ 28 (77)
T d1iloa_ 3 KIQIYGTGCANCQMLEK-NAREAVKEL 28 (77)
T ss_dssp EEEEECSSSSTTHHHHH-HHHHHHHHT
T ss_pred EEEEeCCCCccHHHHHH-HHHHHHHHc
Confidence 344456 6777775555 677777764
No 37
>d1o73a_ c.47.1.10 (A:) Tryparedoxin I {Trypanosoma brucei brucei [TaxId: 5702]}
Probab=29.33 E-value=4.7 Score=27.12 Aligned_cols=30 Identities=20% Similarity=0.112 Sum_probs=24.4
Q ss_pred cccEEEEEecCCeEEEEEeec-CCCchhhHH
Q 030939 108 TGVAELAELDGPFVKIRLRGR-FWHKRSTVI 137 (169)
Q Consensus 108 GGDVELVdvdgg~VkVrL~Ga-C~~Cp~Tlk 137 (169)
||.|.|-++.|..|.|-+-.. |..|...+.
T Consensus 18 ~~~v~l~~~~GK~vvl~FwatwC~~C~~~~p 48 (144)
T d1o73a_ 18 SGEVSLGSLVGKTVFLYFSASWCPPCRGFTP 48 (144)
T ss_dssp TSCBCSGGGTTCEEEEEEECTTCHHHHHHHH
T ss_pred CCEEeHHHhCCCEEEEEeChhhCccchhhhH
Confidence 888999999999999988766 888885444
No 38
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.28 E-value=31 Score=21.14 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=23.6
Q ss_pred EEEEEeecCCCchhhHHHHHHHHHHHhCCCceEEEecCC
Q 030939 121 VKIRLRGRFWHKRSTVIARLANYLKQRIPEILEVDIEDE 159 (169)
Q Consensus 121 VkVrL~GaC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~d~ 159 (169)
+.++..=.|.+|..+++ +.|. ++|+|..|.+.-+
T Consensus 8 ~~f~V~M~C~~C~~~Ie----k~l~-~~~gV~~v~vdl~ 41 (72)
T d1qupa2 8 ATYAIPMHCENCVNDIK----ACLK-NVPGINSLNFDIE 41 (72)
T ss_dssp EEEECCCCSTTHHHHHH----HHHT-TCTTEEEEEEETT
T ss_pred EEEEEccCCHHHHHHHH----HHHh-cCCCeeEEEEECC
Confidence 44455567999986554 6666 5899999887433
No 39
>d1ulra_ d.58.10.1 (A:) Acylphosphatase {Thermus thermophilus [TaxId: 274]}
Probab=27.13 E-value=63 Score=20.65 Aligned_cols=62 Identities=19% Similarity=0.285 Sum_probs=36.9
Q ss_pred HHHHhhccccCcCCcccEEEEEecCCeEEEEEeecCCCchhhHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 030939 94 RGELAQLFDTSVGITGVAELAELDGPFVKIRLRGRFWHKRSTVIARLANYLKQRIPEILEVDIEDEKQLDD 164 (169)
Q Consensus 94 RP~L~~Df~~~vGiGGDVELVdvdgg~VkVrL~GaC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~d~~ql~d 164 (169)
|+++++. -..-||.|-| -.++||.|.+-++|. ...+.. ...+|++- |.-..|+-++.+++++
T Consensus 17 R~~~~~~-A~~~~l~G~V--~N~~dG~Vei~~~G~----~~~v~~-f~~~l~~g-p~~a~V~~v~~~~~~~ 78 (87)
T d1ulra_ 17 RAFAQKK-ALELGLSGYA--ENLPDGRVEVVAEGP----KEALEL-FLHHLKQG-PRLARVEAVEVQWGEE 78 (87)
T ss_dssp HHHHHHH-HHHTTCEEEE--EECTTSCEEEEEESC----HHHHHH-HHHHHHHC-STTCEEEEEEEEEECC
T ss_pred HHHHHHH-HHHcCCeEEE--EECCCCCEEEEEEEC----HHHHHH-HHHHHhhC-CCCcEEEEEEEEECCC
Confidence 4444433 2345677763 356789999999997 445554 44667753 5545555544444443
No 40
>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]}
Probab=26.02 E-value=19 Score=24.70 Aligned_cols=17 Identities=24% Similarity=0.137 Sum_probs=14.3
Q ss_pred cCCcccEEEEEecCCeEE
Q 030939 105 VGITGVAELAELDGPFVK 122 (169)
Q Consensus 105 vGiGGDVELVdvdgg~Vk 122 (169)
+| ||..|++-++++.+.
T Consensus 9 IG-GGStEl~~~~~~~~~ 25 (177)
T d1u6za3 9 IG-GGSTELVIGENFEPI 25 (177)
T ss_dssp EC-SSCEEEEEEETTEEE
T ss_pred eC-CChhheEEEECCcEe
Confidence 68 999999999887654
No 41
>d1t82a_ d.38.1.5 (A:) Putative thioesterase SO4397 {Shewanella oneidensis [TaxId: 70863]}
Probab=25.71 E-value=41 Score=22.53 Aligned_cols=36 Identities=6% Similarity=-0.071 Sum_probs=26.8
Q ss_pred cHHHHHHHHHHHHHHHhhccccCcCCcccEEEEEecCCeEEEEEe
Q 030939 82 TEDNVRQVIADARGELAQLFDTSVGITGVAELAELDGPFVKIRLR 126 (169)
Q Consensus 82 teE~Ve~VLeeiRP~L~~Df~~~vGiGGDVELVdvdgg~VkVrL~ 126 (169)
+-+++++.+.+-=|+.+.. ++++.+++++.+.+++.
T Consensus 4 ~l~~l~~~~~~~iP~~~~l---------Gi~i~~~~~~~~~~~~p 39 (143)
T d1t82a_ 4 LLNRLRQTWHSTIPVSEFM---------QIAPLSFTDGELSVSAP 39 (143)
T ss_dssp HHHHHHHHHHHHCHHHHHT---------TCEEEEEETTEEEEECC
T ss_pred HHHHHHHHHHhhCChHHHc---------CcEEEEEcCCeEEEEee
Confidence 3455666666666887777 38999999999998874
No 42
>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}
Probab=24.68 E-value=25 Score=29.16 Aligned_cols=55 Identities=16% Similarity=0.065 Sum_probs=41.4
Q ss_pred cCcCCcccEEEEEecCCeEEEEEeecCCCchhhHHHHHHHHHHHhCCCceEEEecCC
Q 030939 103 TSVGITGVAELAELDGPFVKIRLRGRFWHKRSTVIARLANYLKQRIPEILEVDIEDE 159 (169)
Q Consensus 103 ~~vGiGGDVELVdvdgg~VkVrL~GaC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~d~ 159 (169)
-|++.+|.|=||+-++|.|.|+..+. .--..+-..+++.|+=.+|+.+-|+-.++
T Consensus 76 ~s~~Gs~Gv~FV~~e~gaiVlK~s~t--ta~E~y~~eLAr~LGvpvPqmRvI~~~~~ 130 (342)
T d1cjaa_ 76 RSEKGTEGLFFVETESGVFIVKRSTN--IESETFCSLLCMRLGLHAPKVRVVSSNSE 130 (342)
T ss_dssp ECCSTTSCEEEEEESSCEEEEECCTT--HHHHHHHHHHHHHHTCCCCCEEEEESSSH
T ss_pred EeecCCceEEEEEcCCceEEEecCCc--hHHHHHHHHHHHHhCCCCCceEEecCCCH
Confidence 57788999999999999999988553 11145556677888888999888874443
No 43
>d1j2ga2 d.96.1.4 (A:159-312) Urate oxidase (uricase) {Bacillus sp., strain TB-90 [TaxId: 1409]}
Probab=23.92 E-value=1.1e+02 Score=22.18 Aligned_cols=78 Identities=13% Similarity=0.137 Sum_probs=46.2
Q ss_pred ccccccCCCcceeeec-cccchhhcccCCCCCCCccccHHHHHHHHHHHHHHHhhccccCcCCcccEEEEEecCCeEEEE
Q 030939 46 QKKLSRRKPILLSTSI-DRGYLTRTAAGGVPPPPLDLTEDNVRQVIADARGELAQLFDTSVGITGVAELAELDGPFVKIR 124 (169)
Q Consensus 46 ~~~~~~~~p~~~~t~~-~r~~~~~~~~~~~~~~~l~LteE~Ve~VLeeiRP~L~~Df~~~vGiGGDVELVdvdgg~VkVr 124 (169)
.--||-+.=+.++|.+ ++|.--..-......+-.....+.|++++- ..- .|+
T Consensus 34 YTTLpet~DRilaT~v~a~W~y~~~~~~~~~~~~~~~~~~~vr~~~l------~~F-------a~~-------------- 86 (154)
T d1j2ga2 34 YTTLPEDSNRPLFVYLNIKWKYKNTEDSFGTNPENYVAAEQIRDIAT------SVF-------HET-------------- 86 (154)
T ss_dssp TCCCCCBSSCCEEEEEEEEEEESSGGGGGSSSGGGCCCHHHHHHHHH------HHH-------HHC--------------
T ss_pred cccCCCcccceEEEEEeeEEEECCcccccccchhhHHHHHHHHHHhh------ccc-------CCC--------------
Confidence 4457888888999988 666432221112222333445666666652 222 222
Q ss_pred EeecCCCch---hhHHHHHHHHHHHhCCCceEEEec
Q 030939 125 LRGRFWHKR---STVIARLANYLKQRIPEILEVDIE 157 (169)
Q Consensus 125 L~GaC~~Cp---~Tlk~gIE~~Lke~IPEI~~V~i~ 157 (169)
..| .||= .+++.+-+++|+|.+|...
T Consensus 87 ------~S~SVQ~TLY-~m~~~vL~~~Pei~~I~~~ 115 (154)
T d1j2ga2 87 ------ETLSIQHLIY-LIGRRILERFPQLQEVYFE 115 (154)
T ss_dssp ------CBSCHHHHHH-HHHHHHHHHCTTEEEEEEE
T ss_pred ------CCHHHHHHHH-HHHHHHHHhCCCeEEEEEE
Confidence 123 4444 7888889999999999875
No 44
>d1vqza1 d.224.1.3 (A:242-329) LplA-like protein SP1160, C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=23.85 E-value=57 Score=20.94 Aligned_cols=26 Identities=23% Similarity=0.493 Sum_probs=21.4
Q ss_pred cccEEE-EEecCCeE-EEEEeecCCCch
Q 030939 108 TGVAEL-AELDGPFV-KIRLRGRFWHKR 133 (169)
Q Consensus 108 GGDVEL-Vdvdgg~V-kVrL~GaC~~Cp 133 (169)
+|.||+ ++|++|.+ .+++-|-|-++.
T Consensus 15 ~G~vev~l~V~~G~I~~iki~GDff~~~ 42 (88)
T d1vqza1 15 SGKVEVFANVTESKIQDIKIYGDFFGIE 42 (88)
T ss_dssp TEEEEEEEEEETTEEEEEEEEESCCCSS
T ss_pred CcEEEEEEEEeCCEEEEEEEEecCCCch
Confidence 788998 88887775 599999998765
No 45
>d1qxoa_ d.258.1.1 (A:) Chorismate synthase, AroC {Streptococcus pneumoniae [TaxId: 1313]}
Probab=23.53 E-value=1.2e+02 Score=24.95 Aligned_cols=61 Identities=21% Similarity=0.213 Sum_probs=39.6
Q ss_pred ccHHHHHHHHHHHHHHHhhccccCcCCcccEEEEEecCCeEEEEEeecCCC--ch----hhHHHHHHHHHHHhCCCceEE
Q 030939 81 LTEDNVRQVIADARGELAQLFDTSVGITGVAELAELDGPFVKIRLRGRFWH--KR----STVIARLANYLKQRIPEILEV 154 (169)
Q Consensus 81 LteE~Ve~VLeeiRP~L~~Df~~~vGiGGDVELVdvdgg~VkVrL~GaC~~--Cp----~Tlk~gIE~~Lke~IPEI~~V 154 (169)
-.++++++.|+++|- +.| ||| |-||+ ..+|--.| -| ..|.+.|.++|.. ||-++.|
T Consensus 195 ~~~~~m~~~I~~ar~--~gD---SlG--G~ve~----------~~~gvP~GLG~pv~~d~kLda~La~AlmS-IpAvKgv 256 (388)
T d1qxoa_ 195 EREQEIKDYIDQIKR--DGD---TIG--GVVET----------VVGGVPVGLGSYVQWDRKLDARLAQAVVS-INAFKGV 256 (388)
T ss_dssp GGHHHHHHHHHHHHH--TTC---CBC--EEEEE----------EEESCCTTCSCSSSGGGCHHHHHHHHHHT-STTEEEE
T ss_pred HHhhhhHHHHHHHHh--cCC---CcC--ceEEE----------EEEeCCccccCCccCCccccHHHHHHHhc-ccceeee
Confidence 456777777877763 233 554 55554 44443222 22 3688888888886 9999999
Q ss_pred EecCC
Q 030939 155 DIEDE 159 (169)
Q Consensus 155 ~i~d~ 159 (169)
++-+.
T Consensus 257 EfG~G 261 (388)
T d1qxoa_ 257 EFGLG 261 (388)
T ss_dssp EETTG
T ss_pred ecccc
Confidence 98765
No 46
>d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]}
Probab=23.23 E-value=68 Score=21.66 Aligned_cols=43 Identities=16% Similarity=0.188 Sum_probs=30.5
Q ss_pred HHHHHHhhccccCcCCcccEEEEEecC-CeEEEEEeecCCCch------hhHHHHHHHHHHHh
Q 030939 92 DARGELAQLFDTSVGITGVAELAELDG-PFVKIRLRGRFWHKR------STVIARLANYLKQR 147 (169)
Q Consensus 92 eiRP~L~~Df~~~vGiGGDVELVdvdg-g~VkVrL~GaC~~Cp------~Tlk~gIE~~Lke~ 147 (169)
.....|++. |++++++.+.+ + ++| ++|++ ..+...|.++|+++
T Consensus 267 ~~~~~l~~~-------g~~~~~~~lp~~g-----i~G-~gH~~~~e~~~~~va~~i~~wL~~~ 316 (318)
T d1qlwa_ 267 AFIDALNAA-------GGKGQLMSLPALG-----VHG-NSHMMMQDRNNLQVADLILDWIGRN 316 (318)
T ss_dssp HHHHHHHHT-------TCCEEEEEGGGGT-----CCC-CCTTGGGSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHh-------CCCcEEEEecccc-----cCC-CcCccccCcCHHHHHHHHHHHHHhc
Confidence 346678889 99999999843 3 344 57876 34556788888764
No 47
>d1jdqa_ d.68.3.3 (A:) Hypothetical protein TM0983 {Thermotoga maritima [TaxId: 2336]}
Probab=22.81 E-value=19 Score=23.81 Aligned_cols=40 Identities=25% Similarity=0.272 Sum_probs=27.9
Q ss_pred EEEEeecCCCchhhHHHHHHHHHHHhCC-CceEEEecCCcccCC
Q 030939 122 KIRLRGRFWHKRSTVIARLANYLKQRIP-EILEVDIEDEKQLDD 164 (169)
Q Consensus 122 kVrL~GaC~~Cp~Tlk~gIE~~Lke~IP-EI~~V~i~d~~ql~d 164 (169)
.|=++|. .||+++. .+.++|++.=+ ++.+|.+.|+.-..|
T Consensus 28 ~LD~rG~--~CP~Pll-~~kkal~~l~~Ge~L~V~~dd~~a~~d 68 (98)
T d1jdqa_ 28 TLDVRGE--VCPVPDV-ETKRALQNMKPGEILEVWIDYPMSKER 68 (98)
T ss_dssp EEECSSC--CSSHHHH-HHHHHHHTCCTTCEEEEEESSCTHHHH
T ss_pred eEECCCC--cCCHHHH-HHHHHHHcCCCCCEEEEEeCCcchHHH
Confidence 4455664 7998887 56677877444 689999988865443
No 48
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}
Probab=22.41 E-value=34 Score=20.75 Aligned_cols=32 Identities=13% Similarity=0.096 Sum_probs=20.9
Q ss_pred eEEEEEeecCCCchhhHHHHHHHHHHHhCCCceEEEec
Q 030939 120 FVKIRLRGRFWHKRSTVIARLANYLKQRIPEILEVDIE 157 (169)
Q Consensus 120 ~VkVrL~GaC~~Cp~Tlk~gIE~~Lke~IPEI~~V~i~ 157 (169)
....+..=.|.+|...++ ++|+ ++|++ +|.+.
T Consensus 2 k~ef~V~M~C~~C~~~I~----~aL~-~~~gv-~v~v~ 33 (66)
T d1fe0a_ 2 KHEFSVDMTCGGCAEAVS----RVLN-KLGGV-KYDID 33 (66)
T ss_dssp EEEEEECCCSHHHHHHHH----HHHH-HHCSE-EEEEE
T ss_pred CEEEEEccCchHHHHHHH----HHHh-cCCCc-EEEEE
Confidence 345556678999987655 5664 36886 57654
No 49
>d2vjva1 d.58.57.1 (A:6-130) ISHP608 transposase {Helicobacter pylori [TaxId: 210]}
Probab=21.31 E-value=1.1e+02 Score=20.46 Aligned_cols=62 Identities=13% Similarity=0.018 Sum_probs=44.1
Q ss_pred HHHHHHHHHH-HHHHhhccccCcCCcccEEEEEecCCeEEEEEeecCCCch----hhHHHHHHHHHHHhCCCce
Q 030939 84 DNVRQVIADA-RGELAQLFDTSVGITGVAELAELDGPFVKIRLRGRFWHKR----STVIARLANYLKQRIPEIL 152 (169)
Q Consensus 84 E~Ve~VLeei-RP~L~~Df~~~vGiGGDVELVdvdgg~VkVrL~GaC~~Cp----~Tlk~gIE~~Lke~IPEI~ 152 (169)
++|++-|.++ +-..++. |-.+.=++++.+-|-+=+...=...+ ..+|..=.+.|++++|+++
T Consensus 29 ~~v~~~l~~~i~~~~~~~-------~~~i~~~~~~~DHVHllv~~~p~~sis~~v~~lKg~Ssr~i~~~f~~lk 95 (125)
T d2vjva1 29 GAVEMRLKEIIQEVAKEL-------RVEIIEMQTDKDHIHILADIDPSFGVMKFIKTAKGRSSRILRQEFNHLK 95 (125)
T ss_dssp HHHHHHHHHHHHHHHHHT-------TCEEEEEEEETTEEEEEEECCTTTCHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHhhc-------CceeeeccccCCcceEEEEeccccChhHhhchhcccchHHHHHHHHHHH
Confidence 4566666654 7677777 65666666677888887766644555 6788888889999999875
No 50
>d1um0a_ d.258.1.1 (A:) Chorismate synthase, AroC {Helicobacter pylori [TaxId: 210]}
Probab=20.80 E-value=88 Score=25.54 Aligned_cols=26 Identities=15% Similarity=0.233 Sum_probs=21.6
Q ss_pred hhHHHHHHHHHHHhCCCceEEEecCCc
Q 030939 134 STVIARLANYLKQRIPEILEVDIEDEK 160 (169)
Q Consensus 134 ~Tlk~gIE~~Lke~IPEI~~V~i~d~~ 160 (169)
-.|.+.|.+++.. ||-++.|++-+.-
T Consensus 227 ~kLda~LA~A~mS-IpAvKgVE~G~Gf 252 (365)
T d1um0a_ 227 AKLDAKIAEAMMG-LNGVKAVEIGKGV 252 (365)
T ss_dssp BCHHHHHHHHHHT-STTEEEEEETTGG
T ss_pred cchhhHHHHHHhc-ccceeeeeeccch
Confidence 4788888888886 9999999997653
No 51
>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.18 E-value=21 Score=23.54 Aligned_cols=68 Identities=15% Similarity=0.078 Sum_probs=40.7
Q ss_pred CCCCCccccHHHHHHHHHH-HHHHHhhccccCcCCcccEEEEEecCC--eEEEEEeecCCCch-hhHHHHHHHHHHHhCC
Q 030939 74 VPPPPLDLTEDNVRQVIAD-ARGELAQLFDTSVGITGVAELAELDGP--FVKIRLRGRFWHKR-STVIARLANYLKQRIP 149 (169)
Q Consensus 74 ~~~~~l~LteE~Ve~VLee-iRP~L~~Df~~~vGiGGDVELVdvdgg--~VkVrL~GaC~~Cp-~Tlk~gIE~~Lke~IP 149 (169)
.+..+.....|++.+.|.+ ++..|.+- +-+ .+.. .+.+=|-| |- ......+++.|++.+|
T Consensus 33 g~~N~~~~~~~~~~~~i~~~i~~~l~~~-------~~~-----~~~~i~~i~~GlAG----~~~~~~~~~l~~~l~~~~~ 96 (117)
T d2ch5a2 33 LSTNHWLIGTDKCVERINEMVNRAKRKA-------GVD-----PLVPLRSLGLSLSG----GDQEDAGRILIEELRDRFP 96 (117)
T ss_dssp CCCCHHHHCHHHHHHHHHHHHHHHHHHH-------TCC-----TTCCBSEEEEEETT----TTCHHHHHHHHHHHHHHCT
T ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHHh-------cCC-----CCccccEEEEEeec----cCcchhHHHHHHHHHHHCC
Confidence 3444455678888888875 68888765 111 1111 23333333 43 5566689999999999
Q ss_pred Cc-eEEEec
Q 030939 150 EI-LEVDIE 157 (169)
Q Consensus 150 EI-~~V~i~ 157 (169)
.+ ..|.++
T Consensus 97 ~~~~~v~v~ 105 (117)
T d2ch5a2 97 YLSESYLIT 105 (117)
T ss_dssp TSBSCEEEE
T ss_pred CCCceEEEe
Confidence 86 345443
Done!