BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030940
(169 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225429185|ref|XP_002275810.1| PREDICTED: uncharacterized protein LOC100266884 [Vitis vinifera]
gi|297736400|emb|CBI25123.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 102/142 (71%), Gaps = 8/142 (5%)
Query: 3 VASLQIGKPSLLSSVSISQSNFPGK-------LDSGKVFLRSRCLIRRKFKVCCGVQEGD 55
+ASLQI K S + ISQS K DS K S RR+ +VCCGVQEGD
Sbjct: 1 MASLQILKSSTFPPLPISQSKISRKSTCLFSEFDSRKRIRNSAFFTRRRLRVCCGVQEGD 60
Query: 56 KQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTE 115
QSNGEEPPESLFMKELKRRGMTPTSLLEDS R GL+++ KL EEDIGFS+RN ST+
Sbjct: 61 NQSNGEEPPESLFMKELKRRGMTPTSLLEDSKRGAYGLEEEIKL-EEDIGFSKRNAYSTD 119
Query: 116 IDKSLADQRERSMALNSEGLEG 137
+ +L++QRERSMALNSEGLEG
Sbjct: 120 FEANLSNQRERSMALNSEGLEG 141
>gi|255562188|ref|XP_002522102.1| conserved hypothetical protein [Ricinus communis]
gi|223538701|gb|EEF40302.1| conserved hypothetical protein [Ricinus communis]
Length = 216
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 103/142 (72%), Gaps = 8/142 (5%)
Query: 3 VASLQIGKPSLLSSVSISQSNFPGKLDSGKVFLR------SRCLIRRKFKVCCGVQEGDK 56
+A+L + K S LS +SI Q NFPG + + L+ R + ++KF VCC VQEGD
Sbjct: 1 MAALYVLK-STLSPISIQQKNFPGNSNPRRTILKLENFTSRRYIQKQKFSVCCSVQEGDN 59
Query: 57 QSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKL-KEEDIGFSRRNTVSTE 115
Q+N EE PESLFMKELKRRGMTPTSLLEDS++ GL+D+ K+ +EED GF +R VSTE
Sbjct: 60 QNNAEEAPESLFMKELKRRGMTPTSLLEDSNKGSYGLEDEFKIGQEEDRGFFKRKVVSTE 119
Query: 116 IDKSLADQRERSMALNSEGLEG 137
DKSL +QRE SMALNSEGLEG
Sbjct: 120 FDKSLTNQRETSMALNSEGLEG 141
>gi|351727323|ref|NP_001236133.1| uncharacterized protein LOC100305745 [Glycine max]
gi|255626505|gb|ACU13597.1| unknown [Glycine max]
Length = 217
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 92/138 (66%), Gaps = 17/138 (12%)
Query: 14 LSSVSISQSNFPGKLDSGKVFLRSRCLIRRK--------------FKVCCGVQEGDKQSN 59
LS +S+SQSNF K C + ++ F+VCC QE + ++N
Sbjct: 8 LSQLSLSQSNFLRKSTWNNHL---PCYLHKRIAKLQTFTTSKSSTFRVCCSSQETNNKNN 64
Query: 60 GEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKS 119
GEEPPESLFMKELKRRGMTPTSLL+D ++D GLD++ + EED GF +R VST +++S
Sbjct: 65 GEEPPESLFMKELKRRGMTPTSLLDDYKQSDYGLDEEVYVNEEDRGFPKRKAVSTNVERS 124
Query: 120 LADQRERSMALNSEGLEG 137
L +QRERSMALNSEGLEG
Sbjct: 125 LDNQRERSMALNSEGLEG 142
>gi|388522639|gb|AFK49381.1| unknown [Medicago truncatula]
Length = 214
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 93/132 (70%), Gaps = 8/132 (6%)
Query: 14 LSSVSISQSNFP--GKLD--SGKVFLRSRCLIRRKFK---VCCGV-QEGDKQSNGEEPPE 65
LS +S+SQSNFP L+ + + F R L + K VCC Q+ Q+NGEEPPE
Sbjct: 8 LSQLSLSQSNFPRNSSLNHPTQQCFFHKRILKFQNSKSSRVCCSSSQDAKNQNNGEEPPE 67
Query: 66 SLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQRE 125
SLF+KELKRRGMTPTSLLED +T+ G+D++ + EED GF R TVST ID+ L +QRE
Sbjct: 68 SLFLKELKRRGMTPTSLLEDYKQTNCGVDEEAFVNEEDRGFLNRKTVSTNIDRGLENQRE 127
Query: 126 RSMALNSEGLEG 137
RSMALNSEGLEG
Sbjct: 128 RSMALNSEGLEG 139
>gi|356536075|ref|XP_003536566.1| PREDICTED: uncharacterized protein LOC100797764 [Glycine max]
Length = 217
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 91/138 (65%), Gaps = 17/138 (12%)
Query: 14 LSSVSISQSNFPGKLDSGKVFLRSRCLIRRK--------------FKVCCGVQEGDKQSN 59
LS +S+SQSNF K C I ++ F+V C E +KQ+N
Sbjct: 8 LSQLSLSQSNFLRKSTWNNHL---PCYIHKRIAKLQTFTSSKSSTFRVRCSSPETNKQNN 64
Query: 60 GEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKS 119
GEEPPESLFMKELKRRGMTPTSLL+D ++D GLD++ + EED GF +R VST +++S
Sbjct: 65 GEEPPESLFMKELKRRGMTPTSLLDDYKQSDYGLDEEVYVNEEDRGFPKRKAVSTNVERS 124
Query: 120 LADQRERSMALNSEGLEG 137
L +QRERSMALNSEGLEG
Sbjct: 125 LDNQRERSMALNSEGLEG 142
>gi|224105771|ref|XP_002313927.1| predicted protein [Populus trichocarpa]
gi|222850335|gb|EEE87882.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/152 (54%), Positives = 105/152 (69%), Gaps = 18/152 (11%)
Query: 3 VASLQIGKPSLLSSVSISQS-NFPGKLDSGKVFLRSRCLI---------RRKFKVCCGVQ 52
+ASL I K S LS++S S S +F GK + K + R ++K KV C VQ
Sbjct: 1 MASLHILK-STLSTLSTSPSKDFIGKSNYRKTIPKLRTFYGSSRRYSGRQQKVKVFCSVQ 59
Query: 53 EGDK-QSNG------EEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIG 105
E D Q NG EEP ESLFMKELKRRGMTPTSLLE+++R + G++D+ K+ EED G
Sbjct: 60 EEDNNQRNGKFSYQREEPTESLFMKELKRRGMTPTSLLEETNRGNYGVEDEMKIGEEDRG 119
Query: 106 FSRRNTVSTEIDKSLADQRERSMALNSEGLEG 137
FS+RN VSTE+DKSL++QRE+SMALNSEG+EG
Sbjct: 120 FSKRNPVSTELDKSLSNQREKSMALNSEGIEG 151
>gi|224060907|ref|XP_002300286.1| predicted protein [Populus trichocarpa]
gi|222847544|gb|EEE85091.1| predicted protein [Populus trichocarpa]
Length = 152
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/78 (76%), Positives = 72/78 (92%)
Query: 60 GEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKS 119
GEEPPESLFMKELKRRGMTPTSLLE+++R + G++D+ K+ EED GFS+RN+VSTEID+
Sbjct: 1 GEEPPESLFMKELKRRGMTPTSLLEETNRGNYGVEDEMKIGEEDWGFSKRNSVSTEIDRG 60
Query: 120 LADQRERSMALNSEGLEG 137
L+DQRERSMALNSEGLEG
Sbjct: 61 LSDQRERSMALNSEGLEG 78
>gi|449465109|ref|XP_004150271.1| PREDICTED: uncharacterized protein LOC101221726 [Cucumis sativus]
gi|449484408|ref|XP_004156874.1| PREDICTED: uncharacterized LOC101221726 [Cucumis sativus]
Length = 217
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 99/147 (67%), Gaps = 16/147 (10%)
Query: 3 VASLQIGKPSLLSSVSISQSNFPGK------------LDSGKVFLRSRCLIRRKFKVCCG 50
+A+LQI K SL S SIS SNF + L + LR C+ RR F C
Sbjct: 1 MAALQILKSSL-SLPSISHSNFGSQSTRFVSDFDSLLLHGRRRSLRYACVYRR-FTFRCA 58
Query: 51 VQEGDKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRN 110
++ DK++NGEEPPESLFMKELK+RG+TPTSLLED++ +D L ++ E+ FSRR+
Sbjct: 59 AKDTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGG--EMTGENRDFSRRS 116
Query: 111 TVSTEIDKSLADQRERSMALNSEGLEG 137
VSTE++KSL++QRERSM LNSEGLEG
Sbjct: 117 AVSTEVNKSLSNQRERSMQLNSEGLEG 143
>gi|388519125|gb|AFK47624.1| unknown [Lotus japonicus]
Length = 215
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 86/133 (64%), Gaps = 9/133 (6%)
Query: 14 LSSVSISQSNF---PGK-LDSGKVFLRSR-----CLIRRKFKVCCGVQEGDKQSNGEEPP 64
LS +S+S+SNF P + + FL R KF V C Q Q+NG+E P
Sbjct: 8 LSQLSLSKSNFSRHPTRNISPPDCFLVRRIGKFQTFTASKFMVSCTSQNSQNQNNGDEAP 67
Query: 65 ESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQR 124
ESLFMKELKRRGM PTSLLED ++ + LD++ + EED G +R+ VST I++ L +QR
Sbjct: 68 ESLFMKELKRRGMNPTSLLEDYKQSSNVLDEEVYVNEEDRGSPKRSAVSTNIERGLENQR 127
Query: 125 ERSMALNSEGLEG 137
ERSMALNSEGLEG
Sbjct: 128 ERSMALNSEGLEG 140
>gi|312282351|dbj|BAJ34041.1| unnamed protein product [Thellungiella halophila]
Length = 212
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 91/143 (63%), Gaps = 12/143 (8%)
Query: 1 MAVASLQIGKPSLLSSVSISQSNFPGKLDSGKVFLR---SRCLIR--RKFKVCCGVQEGD 55
MA +SL+I K S VSIS+ P KL+ K R SR R R +VC ++GD
Sbjct: 1 MASSSLEIVK-LCGSPVSISRHQSPVKLEPRKRVFRLADSRNWHRLGRCVRVCSSARDGD 59
Query: 56 KQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTE 115
QS G+EPPESLFMKELKRRGMTPTSLL+D + +D+ KE G S + T +T
Sbjct: 60 NQSKGDEPPESLFMKELKRRGMTPTSLLQD---YEVDVDEVKTGKE--TGNSTKTTATTP 114
Query: 116 -IDKSLADQRERSMALNSEGLEG 137
D+SL +QRERS+ALNSEGLEG
Sbjct: 115 AFDQSLLNQRERSLALNSEGLEG 137
>gi|302142132|emb|CBI19335.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 72/108 (66%), Gaps = 14/108 (12%)
Query: 31 GKVF-LRSRCLIRRKFKVCCGVQEGDKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRT 89
G+V LR R + F+V CGV+EG + NGEE PESLF+KE+KRRGM +SL S
Sbjct: 102 GRVLRLRDRQCLTGGFRVRCGVEEGKSERNGEEAPESLFVKEMKRRGMKTSSLPSGS--- 158
Query: 90 DSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQRERSMALNSEGLEG 137
+EED G S+ N VSTEI+ SL++QRERSMALNSEG+EG
Sbjct: 159 ----------EEEDSGISKTNLVSTEIENSLSNQRERSMALNSEGIEG 196
>gi|225458960|ref|XP_002285552.1| PREDICTED: uncharacterized protein LOC100262687 [Vitis vinifera]
Length = 195
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 72/108 (66%), Gaps = 14/108 (12%)
Query: 31 GKVF-LRSRCLIRRKFKVCCGVQEGDKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRT 89
G+V LR R + F+V CGV+EG + NGEE PESLF+KE+KRRGM +SL S
Sbjct: 33 GRVLRLRDRQCLTGGFRVRCGVEEGKSERNGEEAPESLFVKEMKRRGMKTSSLPSGS--- 89
Query: 90 DSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQRERSMALNSEGLEG 137
+EED G S+ N VSTEI+ SL++QRERSMALNSEG+EG
Sbjct: 90 ----------EEEDSGISKTNLVSTEIENSLSNQRERSMALNSEGIEG 127
>gi|297852692|ref|XP_002894227.1| hypothetical protein ARALYDRAFT_474138 [Arabidopsis lyrata subsp.
lyrata]
gi|297340069|gb|EFH70486.1| hypothetical protein ARALYDRAFT_474138 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 82/142 (57%), Gaps = 10/142 (7%)
Query: 1 MAVASLQIGKPSLLSSVSISQSNFPGKLDSGKVFLR-SRCLIRRKFKVCCGVQ----EGD 55
MA +SL+I K S VSI + P KL+ K LR S + C V GD
Sbjct: 1 MASSSLEIVK-LCGSPVSIPRHKSPIKLECRKRVLRLSDSRTWHRLGTCVRVYSSALNGD 59
Query: 56 KQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTE 115
QS GEEPPESLFMKELKRRGMTPTSLL+D D+ K +E S+ S
Sbjct: 60 NQSKGEEPPESLFMKELKRRGMTPTSLLQDYEVD----QDEIKTDKETGNSSKTTATSPA 115
Query: 116 IDKSLADQRERSMALNSEGLEG 137
DKSL +QRERS+ALNSEGLEG
Sbjct: 116 FDKSLLNQRERSLALNSEGLEG 137
>gi|147834803|emb|CAN61776.1| hypothetical protein VITISV_024980 [Vitis vinifera]
Length = 260
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 72/108 (66%), Gaps = 14/108 (12%)
Query: 31 GKVF-LRSRCLIRRKFKVCCGVQEGDKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRT 89
G+V LR R + F+V CGV+EG + NGEE PESLF+KE+KRRGM +SL S
Sbjct: 98 GRVLRLRDRQCLTGGFRVRCGVEEGKSERNGEEAPESLFVKEMKRRGMKTSSLPSGS--- 154
Query: 90 DSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQRERSMALNSEGLEG 137
+EED G S+ N VSTEI+ SL++QRERSMALNSEG+EG
Sbjct: 155 ----------EEEDSGISKTNLVSTEIENSLSNQRERSMALNSEGIEG 192
>gi|21553619|gb|AAM62712.1| tubulin alpha-6 chain, putative [Arabidopsis thaliana]
Length = 209
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 81/140 (57%), Gaps = 9/140 (6%)
Query: 1 MAVASLQIGKPSLLSSVSISQSNFPGKLDSGKVFLR---SRCLIRRKFKVCCGVQEGDKQ 57
MA +SL+I K S VS + P KL+ K R SR R + + GD Q
Sbjct: 1 MASSSLEIVK-LCGSPVSFPRHKSPIKLECRKRVFRLPNSRSWHRLRVS-SSALNGGDNQ 58
Query: 58 SNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEID 117
S GEEPPESLFMKELKRRGMTPTSLL+D D+ K +E S+ + D
Sbjct: 59 SKGEEPPESLFMKELKRRGMTPTSLLQDYEVE----QDEIKTGKETGNSSKTTATTPAFD 114
Query: 118 KSLADQRERSMALNSEGLEG 137
KSL +QRERS+ALNSEGLEG
Sbjct: 115 KSLLNQRERSLALNSEGLEG 134
>gi|15222858|ref|NP_175424.1| uncharacterized protein [Arabidopsis thaliana]
gi|8569098|gb|AAF76443.1|AC015445_10 ESTs gb|F20048, gb|F20049 come from this gene [Arabidopsis
thaliana]
gi|12248027|gb|AAG50105.1|AF334727_1 putative tubulin alpha-6 chain [Arabidopsis thaliana]
gi|13430518|gb|AAK25881.1|AF360171_1 putative tubulin alpha-6 chain [Arabidopsis thaliana]
gi|332194387|gb|AEE32508.1| uncharacterized protein [Arabidopsis thaliana]
Length = 209
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 81/140 (57%), Gaps = 9/140 (6%)
Query: 1 MAVASLQIGKPSLLSSVSISQSNFPGKLDSGKVFLR---SRCLIRRKFKVCCGVQEGDKQ 57
MA +SL+I K S VS + P KL+ K R SR R + + GD Q
Sbjct: 1 MASSSLEIVK-LCGSPVSFPRHKSPIKLECRKRVFRLPNSRSWHRLRVS-SSALNGGDNQ 58
Query: 58 SNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEID 117
S GEEPPESLFMKELKRRGMTPTSLL+D D+ K +E S+ + D
Sbjct: 59 SKGEEPPESLFMKELKRRGMTPTSLLQDYEVD----QDEIKTGKETGNSSKTTATTPAFD 114
Query: 118 KSLADQRERSMALNSEGLEG 137
KSL +QRERS+ALNSEGLEG
Sbjct: 115 KSLLNQRERSLALNSEGLEG 134
>gi|116792314|gb|ABK26315.1| unknown [Picea sitchensis]
Length = 248
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 5/101 (4%)
Query: 42 RRKFKVCCGVQEGDKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGL-DDKTKLK 100
R + V C + D +GEEPPE+LFMKELKRRGMTP SL E++ ++ GL +TK +
Sbjct: 68 RGRLSVNCQRTDRDGDPSGEEPPETLFMKELKRRGMTPASLFEENDKSPYGLGSTETKTR 127
Query: 101 EE-DIGFSRRNT--VSTEI-DKSLADQRERSMALNSEGLEG 137
EE + GF+ RN + T I D++ DQR RSMALNSEGLEG
Sbjct: 128 EEGNEGFTNRNDRRIFTGIDDRNQVDQRARSMALNSEGLEG 168
>gi|307135958|gb|ADN33818.1| tubulin alpha chain [Cucumis melo subsp. melo]
Length = 141
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 56/69 (81%), Gaps = 2/69 (2%)
Query: 69 MKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQRERSM 128
MKELK+RG+TPTSLLED++ +D GL + + D FSRR+ VSTE++KSL++QRERSM
Sbjct: 1 MKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRD--FSRRSAVSTEVNKSLSNQRERSM 58
Query: 129 ALNSEGLEG 137
LNSEGLEG
Sbjct: 59 QLNSEGLEG 67
>gi|195610832|gb|ACG27246.1| tubulin alpha-6 chain [Zea mays]
Length = 179
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 50/101 (49%), Gaps = 31/101 (30%)
Query: 42 RRKFKVCC--GVQEGDKQSNGE-EPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTK 98
R + +V C G G K+ GE E PESLF +EL+RRGM P
Sbjct: 30 RLRLRVRCRAGGDGGMKKEEGEAEAPESLFARELRRRGMAPG------------------ 71
Query: 99 LKEEDIGFSRRNTVSTEIDKSLA--DQRERSMALNSEGLEG 137
++R +TE ++ A QRERSMALNSEGLEG
Sbjct: 72 --------AKRGVAATEFERGAAADGQRERSMALNSEGLEG 104
>gi|226493796|ref|NP_001147401.1| tubulin alpha-6 chain [Zea mays]
gi|195611052|gb|ACG27356.1| tubulin alpha-6 chain [Zea mays]
gi|413925595|gb|AFW65527.1| tubulin alpha-6 chain [Zea mays]
Length = 198
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 16/103 (15%)
Query: 42 RRKFKVCC--GVQEGDKQSNGE-EPPESLFMKELKRRGM--TPTSLLEDSSRTDSGLDDK 96
R + +V C G G K+ GE E PESLF +EL+RRGM + S + G +
Sbjct: 30 RLRLRVRCRAGGDGGMKKEEGEAEAPESLFARELRRRGMAPGAAAPAGASKEAEEGAPEA 89
Query: 97 TKLKEEDIGFSRRNTVSTEIDKSLA--DQRERSMALNSEGLEG 137
++R +TE ++ A QRERSMALNSEGLEG
Sbjct: 90 G---------AKRGVAATEFERGAAADGQRERSMALNSEGLEG 123
>gi|357156478|ref|XP_003577470.1| PREDICTED: uncharacterized protein LOC100843098 [Brachypodium
distachyon]
Length = 202
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 1 MAVASLQIGKPSLLSSVSISQSNFPGKLDSGKVFLRSRCLIRRKFKVCCGVQEGDKQSNG 60
MA+A + + +P+L SS S ++ +L LR RC + G E D+ S
Sbjct: 1 MAMAVMHLARPALTSSPSSTR-----QLRRRATCLRVRCRV--------GGDE-DRGSEE 46
Query: 61 EEPPESLFMKELKRRGMTPTSLLEDSSRTDSG----LDDKTKLKEEDIGFSRRNTVSTEI 116
+ PESLF KEL+RRGM P S + ++ + + G +
Sbjct: 47 DAAPESLFAKELRRRGMAPGSAPPPAEKSGASAEAEEGGRGGEAGRKRGVAAAAAEFGRA 106
Query: 117 DKSLADQRERSMALNSEGLEGRL 139
+ QRERSMALNSEGLEG L
Sbjct: 107 AAGMDGQRERSMALNSEGLEGLL 129
>gi|302771173|ref|XP_002969005.1| hypothetical protein SELMODRAFT_440550 [Selaginella moellendorffii]
gi|300163510|gb|EFJ30121.1| hypothetical protein SELMODRAFT_440550 [Selaginella moellendorffii]
Length = 461
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 29/128 (22%)
Query: 62 EPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVST------- 114
EPPESLFMKELKRRG+ P + SG +TK K E+ G ++ +
Sbjct: 63 EPPESLFMKELKRRGLAPPTKY-------SGASTETKTKREEFGSGEDSSDTAQSFKSST 115
Query: 115 ----------EIDKSLADQRERSMALNSEGLEGRLTIPLIK---KHSRELILAFLHMHSS 161
E + Q +R++ALNSEGL+G IP + K LAF + +
Sbjct: 116 SSSSSSSNSSEWRDDRSGQLKRTLALNSEGLDG--LIPRAQELIKLGATFFLAFWPLIIA 173
Query: 162 HLVKLLAI 169
+ +AI
Sbjct: 174 IVALFVAI 181
>gi|168059850|ref|XP_001781913.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666629|gb|EDQ53278.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 163
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Query: 55 DKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVST 114
DK + EE PE+LFM+EL +R L +D ++ TK KEE+ S+ ++
Sbjct: 23 DKDPSSEERPETLFMRELAKR----KKLGQDVGMKET----DTKTKEEETEGSKAFSMPK 74
Query: 115 EID-KSLADQRERSMALNSEGLEG 137
D + +DQR+RSMALNSEGL+G
Sbjct: 75 STDERDTSDQRKRSMALNSEGLDG 98
>gi|302817989|ref|XP_002990669.1| hypothetical protein SELMODRAFT_448117 [Selaginella moellendorffii]
gi|300141591|gb|EFJ08301.1| hypothetical protein SELMODRAFT_448117 [Selaginella moellendorffii]
Length = 428
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 29/128 (22%)
Query: 62 EPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRN----------- 110
EPPESLFMKELKRRG+ P + SG +TK K E+ G +
Sbjct: 63 EPPESLFMKELKRRGLAPPTKY-------SGASTETKTKREEFGSGEDSGDTAQSFKSST 115
Query: 111 ------TVSTEIDKSLADQRERSMALNSEGLEGRLTIPLIK---KHSRELILAFLHMHSS 161
+ S+E + Q +R++ALNSEGL+G IP + K LAF + +
Sbjct: 116 SSSSSPSNSSEWRDDRSGQLKRTLALNSEGLDG--LIPRAQELIKLGATFFLAFWPLIIA 173
Query: 162 HLVKLLAI 169
+ +AI
Sbjct: 174 IVALFVAI 181
>gi|326526203|dbj|BAJ93278.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 208
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 35 LRSRCLIRRKFKVCCGVQEGDKQSNGEEPPESLFMKELKRRGMTPTSLLED------SSR 88
LR RC I G + G + + E+ PESLF KEL+RRGM S+L S
Sbjct: 31 LRVRCRID-------GDEGGGARGSEEDAPESLFAKELRRRGMAAGSVLSGEKSGAASEA 83
Query: 89 TDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLAD-QRERSMALNSEGLEG 137
+ G + K + E + AD QRERSM LNSEGLEG
Sbjct: 84 EEGGRGGEAGRKRVVGAAAAAAAAEFERAAAGADGQRERSMTLNSEGLEG 133
>gi|256387098|gb|ACU80551.1| Dof3 protein [Jatropha curcas]
Length = 518
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 52 QEGDKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNT 111
+E DK + GE P ES K+ TPT E+SS D+G+ D K + S T
Sbjct: 73 RESDKDAGGETPLES------KQENGTPTVTAEESSNPDAGISDNPKTSSVEKDNSTSQT 126
Query: 112 VSTEIDKS 119
TE ++S
Sbjct: 127 SKTEEEQS 134
>gi|242071319|ref|XP_002450936.1| hypothetical protein SORBIDRAFT_05g021410 [Sorghum bicolor]
gi|241936779|gb|EES09924.1| hypothetical protein SORBIDRAFT_05g021410 [Sorghum bicolor]
Length = 203
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 64 PESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLAD- 122
PESLF +EL+RRGM + + + + G RR + + AD
Sbjct: 60 PESLFARELRRRGMA------PGAAAAGANKEAEEGAPPEAGAKRRVAAAEFERAAAADG 113
Query: 123 QRERSMALNSEGLEG 137
QR+RSMALNSEGLEG
Sbjct: 114 QRQRSMALNSEGLEG 128
>gi|218185911|gb|EEC68338.1| hypothetical protein OsI_36451 [Oryza sativa Indica Group]
Length = 201
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 64 PESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLAD- 122
PESLF KEL RRGM + + + G E+ G R E + AD
Sbjct: 60 PESLFAKELMRRGMASGAAAAGAGEKEVG--------AEEGGRKRVAAAEFERAAAGADG 111
Query: 123 QRERSMALNSEGLEG 137
QR RSMALNSEGLEG
Sbjct: 112 QRARSMALNSEGLEG 126
>gi|453040305|ref|NP_001263640.1| nuclear factor NF-kappa-B p105 subunit [Rattus norvegicus]
Length = 972
Score = 35.4 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 30/125 (24%)
Query: 55 DKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVST 114
+K++ GE P SLFM K + P S +ED KEED+GF +
Sbjct: 458 EKETQGEGP--SLFMASTKTEAIAPASTMED--------------KEEDVGFQD----NL 497
Query: 115 EIDKSLADQRERSMALNSEGLEGRLTIPL-IKKH---------SRELILAFLHMHSSHLV 164
++K+L + + AL + G + + L +++H L LA +H+H+ +
Sbjct: 498 FLEKALQLAKRHANALFDYAVTGDVKMLLAVQRHLTAVQDENGDSVLHLAIIHLHAQLVR 557
Query: 165 KLLAI 169
LL +
Sbjct: 558 DLLEV 562
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,380,953,970
Number of Sequences: 23463169
Number of extensions: 89940934
Number of successful extensions: 243673
Number of sequences better than 100.0: 51
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 243615
Number of HSP's gapped (non-prelim): 51
length of query: 169
length of database: 8,064,228,071
effective HSP length: 129
effective length of query: 40
effective length of database: 9,332,446,566
effective search space: 373297862640
effective search space used: 373297862640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)