Query 030943
Match_columns 168
No_of_seqs 129 out of 471
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 10:41:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030943.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030943hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v0a_A Endoglucanase H; carboh 99.8 2.5E-20 8.5E-25 146.0 11.4 113 29-167 5-121 (178)
2 1wmx_A COG3291: FOG: PKD repea 91.3 3 0.0001 32.7 10.7 81 74-167 50-141 (205)
3 1wky_A Endo-beta-1,4-mannanase 86.0 14 0.00046 31.9 12.6 109 29-167 312-429 (464)
4 3f95_A Beta-glucosidase; beta- 85.3 5.1 0.00017 31.0 8.6 50 107-167 78-139 (193)
5 1uy4_A Endo-1,4-beta-xylanase 52.5 53 0.0018 23.5 7.0 63 92-166 53-117 (145)
6 1w9s_A BH0236 protein, BHCBM6; 46.3 75 0.0026 22.4 7.1 38 92-135 44-82 (142)
7 1od3_A Putative xylanase; hydr 46.1 86 0.0029 23.1 7.5 61 92-166 75-139 (168)
8 1gui_A Laminarinase 16A; carbo 45.5 77 0.0026 22.3 8.7 45 115-166 76-121 (155)
9 2v4v_A GH59 galactosidase; hyd 35.9 1.1E+02 0.0036 21.1 8.1 39 92-135 34-72 (129)
10 4b1m_A Levanase; hydrolase, CB 30.4 1.6E+02 0.0055 21.6 10.7 38 44-82 38-75 (185)
11 1uxx_X Xylanase U; carbohydrat 28.5 1.5E+02 0.0051 20.6 7.4 39 92-135 36-75 (133)
12 3gdb_A Endo-D, putative unchar 24.4 2.3E+02 0.0079 27.0 7.8 93 56-167 558-652 (937)
13 3c7f_A Xylanase D, endo-1,4-be 21.8 2.4E+02 0.0083 23.8 7.1 37 92-135 390-428 (487)
14 1gu3_A Endoglucanase C; carboh 21.0 2E+02 0.007 20.5 5.6 42 116-167 62-107 (149)
15 2eke_C Ubiquitin-like protein 20.3 1.2E+02 0.0041 20.8 3.9 26 111-136 27-52 (106)
No 1
>1v0a_A Endoglucanase H; carbohydrate binding module, cellulosome, cellulose degradation, hydrolase, glycosidase; 1.98A {Clostridium thermocellum} SCOP: b.18.1.30
Probab=99.83 E-value=2.5e-20 Score=146.02 Aligned_cols=113 Identities=15% Similarity=0.218 Sum_probs=82.6
Q ss_pred CCccEEEecCCccccCCeEEeccceecceeeEEEEEecCCCcceEEEEEEEecccCCCCccccc-cceEEEEeeCCCCCC
Q 030943 29 PSERYIFNFNSKEELKKWHLYSDSEYGGLSSASLEITESGNGMNGIFSGNLSLDLSEGSKWNIS-RSGFCGMRSKKFDGF 107 (168)
Q Consensus 29 ~~~~~l~~F~~~~~~~~W~~~sD~vmGG~S~~~~~~~~~~~~~~~~F~G~lS~~~p~~~~~~~~-~gGFasvrs~~~~~~ 107 (168)
..+++|++|..+. .|..++|. |.|-+ +++.+.. ..+.++||++ | +|||+|||... .+
T Consensus 5 ~~~~~i~df~~~~---~W~~v~Ds---~~s~s-~~~~~g~----~~~~l~VS~~---------N~nGGF~svr~n~--~~ 62 (178)
T 1v0a_A 5 VGEKMLDDFEGVL---NWGSYSGE---GAKVS-TKIVSGK----TGNGMEVSYT---------GTTDGYWGTVYSL--PD 62 (178)
T ss_dssp BSEEEEECSSSSC---CCEEEEET---TCEEE-EEEEECS----SSEEEEEEEE---------CCSSCEEEEEEEC--SC
T ss_pred ccCcceecCCCCC---ceEEEcCC---CcEEE-EEEecCc----eeeEEEEEEe---------cCCCCEEEEEcCC--CC
Confidence 4566888886553 89999994 22222 5554432 3344499999 8 99999999753 57
Q ss_pred CCCCCCCeEEEEEee---cCcEEEEEEEeCCCcCCCCCCCCCceEEEEEcCCCCEEEEEEecC
Q 030943 108 IDLDSYDTIAMKLKG---DGRCYISTIYTENWVNSPGQQEDNSWQSFVFVPKDNWYIAKMQRW 167 (168)
Q Consensus 108 ~dls~y~gl~lrvrG---DGr~Y~l~l~t~~~~~~~~~~~~~~~q~~~ft~~g~Wqtv~iPfs 167 (168)
.|++.|+||+|+|+| +|++|+|+||+....- ..+...|++ .|++...|++|+|||+
T Consensus 63 ~d~s~~~GI~l~vkG~~~nG~~y~~~LR~~~~~~---~~~~~~y~~-sF~t~~~W~~IeIPFs 121 (178)
T 1v0a_A 63 GDWSKWLKISFDIKSVDGSANEIRFMIAEKSING---VGDGEHWVY-SITPDSSWKTIEIPFS 121 (178)
T ss_dssp CCCTTCCEEEEEEEEC---CCCEEEEEEEECTTS---SSEEEEEEE-EECCCSSCEEEEEEGG
T ss_pred CCHhHCCcEEEEEEcCCCCCCEEEEEEeeCCCCC---CCCCeeEEE-EecCCCcCEEEEEEHH
Confidence 999999999999999 6999999999975420 001234554 4666699999999997
No 2
>1wmx_A COG3291: FOG: PKD repeat; CBM30, carbohydrate binding module family30, CELJ, sugar BIN protein; 2.00A {Clostridium thermocellum} SCOP: b.18.1.24 PDB: 1wzx_A 2c24_A
Probab=91.27 E-value=3 Score=32.68 Aligned_cols=81 Identities=15% Similarity=0.182 Sum_probs=54.5
Q ss_pred EEEEEEecccCCCCccccccceEEEEeeCCC-CCCCCCCCC---CeEEEEEeec--CcEEEEEEEeCCCcCCCCCCCCCc
Q 030943 74 IFSGNLSLDLSEGSKWNISRSGFCGMRSKKF-DGFIDLDSY---DTIAMKLKGD--GRCYISTIYTENWVNSPGQQEDNS 147 (168)
Q Consensus 74 ~F~G~lS~~~p~~~~~~~~~gGFasvrs~~~-~~~~dls~y---~gl~lrvrGD--Gr~Y~l~l~t~~~~~~~~~~~~~~ 147 (168)
.++=+|+.+ ++.|+.++-..+- -...||+.| .+|++-|||. |..+.|-+..+.... .....
T Consensus 50 sl~~~~~~~---------~~~~w~~~~~~l~~w~~~DLs~y~~nG~leF~IKG~~GGE~~~ig~~D~~~e~----~~g~~ 116 (205)
T 1wmx_A 50 TLRLNVQTT---------VQSGWWISLLTLRGWNTHDLSQYVENGYLEFDIKGKEGGEDFVIGFRDKVYER----VYGLE 116 (205)
T ss_dssp EEEEEECSC---------CCSSCEEEEEESSTTSCBCCGGGTTTCEEEEEEEESSSCCCCEEEEEECCTTC----TTCSS
T ss_pred ceEEEeccc---------ccCceeEEEEeccCcceeehhhhhcCCeEEEEEecccCceeEEEEEecccccc----cCCce
Confidence 344456665 7888886654431 235788877 4899999994 799999999884321 12344
Q ss_pred eEEEE----EcC-CCCEEEEEEecC
Q 030943 148 WQSFV----FVP-KDNWYIAKMQRW 167 (168)
Q Consensus 148 ~q~~~----ft~-~g~Wqtv~iPfs 167 (168)
-|... +.. +.+||-|+||+.
T Consensus 117 ~~~~~~~~~yi~VttEwQHvsiPLk 141 (205)
T 1wmx_A 117 IDVTTVISNYVTVTTDWQHVKIPLR 141 (205)
T ss_dssp CEEEEEGGGTCCCCSSCEEEEEEGG
T ss_pred eEEEeechheEEeccccEEEEeeHH
Confidence 55544 333 559999999974
No 3
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=86.00 E-value=14 Score=31.87 Aligned_cols=109 Identities=17% Similarity=0.179 Sum_probs=68.2
Q ss_pred CCccEEEecCCccccCCeEEeccceecceeeEEEEEecCCCcceEEEEEEEecccCCCCccccccceEEEEeeCCCCCCC
Q 030943 29 PSERYIFNFNSKEELKKWHLYSDSEYGGLSSASLEITESGNGMNGIFSGNLSLDLSEGSKWNISRSGFCGMRSKKFDGFI 108 (168)
Q Consensus 29 ~~~~~l~~F~~~~~~~~W~~~sD~vmGG~S~~~~~~~~~~~~~~~~F~G~lS~~~p~~~~~~~~~gGFasvrs~~~~~~~ 108 (168)
+.+.++++|.... +.|..-+ ..+|...+... ..+ | .....+.+.+. ++.+|- +... ...
T Consensus 312 ~~~~~~~df~~~~--~~w~~~~--~~~g~~~~~~~-~~~--g-~~sl~~~~~~~---------~~~~~~-~~~~---~~~ 370 (464)
T 1wky_A 312 TSPTTLYDFEEST--QGWTGSS--LSRGPWTVTEW-SSK--G-NHSLKADIQMS---------SNSQHY-LHVI---QNR 370 (464)
T ss_dssp --CEEEECCSSSC--TTEEEES--CSEEEEEESSC-CSS--T-TCEEEEEEEEC---------TTCEEE-EEEE---EEE
T ss_pred CCCcccccccCCC--ccccccc--ccCCceeeccc-ccc--C-ceeEeeeeeec---------CCCceE-EEEe---ecc
Confidence 5567899998763 7899544 23443222111 112 2 24566677665 566663 5443 468
Q ss_pred CCCCCCeEEEEEeec-------CcEEEEEEEeCCCcCCCCCCCCCceEE--EEEcCCCCEEEEEEecC
Q 030943 109 DLDSYDTIAMKLKGD-------GRCYISTIYTENWVNSPGQQEDNSWQS--FVFVPKDNWYIAKMQRW 167 (168)
Q Consensus 109 dls~y~gl~lrvrGD-------Gr~Y~l~l~t~~~~~~~~~~~~~~~q~--~~ft~~g~Wqtv~iPfs 167 (168)
|++.++.|.++|+-. |=+=+|-++|...+ .|+- .....+++|.++.|+++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~k~~~~~---------~w~~~~~~~i~~~~~~~l~~~l~ 429 (464)
T 1wky_A 371 SLQQNSRIQATVKHANWGSVGNGMTARLYVKTGHGY---------TWYSGSFVPINGSSGTTLSLDLS 429 (464)
T ss_dssp CCTTCCEEEEEEEEC-------CEEEEEEEEETTTT---------EEEECCCEEECSSSCEEEEEECT
T ss_pred CCCCcceEEEEEEeccCCCCCCCeeEEEEEEeCCCc---------eEecCCceEecCCCceEEEEEcc
Confidence 999999999999843 45677778887654 3443 12345679999999986
No 4
>3f95_A Beta-glucosidase; beta-sandwich, hydrolase; 1.80A {Pseudoalteromonas SP}
Probab=85.28 E-value=5.1 Score=31.05 Aligned_cols=50 Identities=10% Similarity=0.185 Sum_probs=30.5
Q ss_pred CCCCCCCC--eEEEEEeecC---cEEEEEEEeCCCcCCCCCCCCCceEEEE-E------cCCCCEEEEEEecC
Q 030943 107 FIDLDSYD--TIAMKLKGDG---RCYISTIYTENWVNSPGQQEDNSWQSFV-F------VPKDNWYIAKMQRW 167 (168)
Q Consensus 107 ~~dls~y~--gl~lrvrGDG---r~Y~l~l~t~~~~~~~~~~~~~~~q~~~-f------t~~g~Wqtv~iPfs 167 (168)
+.| +.|. .|.|++|-|- ..-.|.+.+.... -...+ . .+.|+|++|+||++
T Consensus 78 ~~D-s~y~~~aL~fd~rvd~ap~~~v~L~m~Cg~~~----------C~~~vdit~~L~~~~~g~W~tv~IpL~ 139 (193)
T 3f95_A 78 PLD-SKFSTGYLELKMRIDKAPEQGANLQVMCSESN----------CLRDIDFSSFSQLMADKSWHTLAIPLH 139 (193)
T ss_dssp ECC-GGGTTCEEEEEEEEEECCTTCEEEEEEECSSC----------EEEEEEGGGTHHHHTTCCCEEEEEESC
T ss_pred CcC-ChhhCceEEEEEEeecCCCCcEEEEEecCCCC----------ccceeehhHhhhhccCCCCEEEEEeCc
Confidence 356 6554 4888888652 3466677776420 11111 1 25789999999985
No 5
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=52.51 E-value=53 Score=23.52 Aligned_cols=63 Identities=5% Similarity=-0.041 Sum_probs=35.4
Q ss_pred ccceEEEEeeCCCCCCCCCCCCCeEEEEEeecCcEEEEEEEeCCCcCCCCCCCCCceEEEEEcCCC--CEEEEEEec
Q 030943 92 SRSGFCGMRSKKFDGFIDLDSYDTIAMKLKGDGRCYISTIYTENWVNSPGQQEDNSWQSFVFVPKD--NWYIAKMQR 166 (168)
Q Consensus 92 ~~gGFasvrs~~~~~~~dls~y~gl~lrvrGDGr~Y~l~l~t~~~~~~~~~~~~~~~q~~~ft~~g--~Wqtv~iPf 166 (168)
.+|.|+.++.-.|. +.-..|.+||.+.+ ...|.|+.+..- + ..+=...+-.++| .|+++..++
T Consensus 53 ~~G~wi~y~~vdf~-----~G~~~~~~rvas~~-gg~ievrlds~~-G-----~~lgt~~v~~Tggw~~w~tv~~~v 117 (145)
T 1uy4_A 53 ENGNTVTYSNIDFG-----SGATGFSATVATEV-NTSIQIRSDSPT-G-----TLLGTLYVSSTGSWNTYNTVSTNI 117 (145)
T ss_dssp CTTCEEEEEEEECT-----TCEEEEEEEEECSS-CEEEEEEESSTT-S-----CEEEEEEECCCSSTTCCEEEEEEE
T ss_pred CCCCEEEEEEEEcC-----CCCEEEEEEEEeCC-CcEEEEEECCCC-C-----cEEEEEEecCCCCCcccEEEEEEe
Confidence 57788777753221 35567888888655 457888877531 1 1111222222333 788887765
No 6
>1w9s_A BH0236 protein, BHCBM6; carbohydrate-binding module, lectin, beta-glucan, carbohydrate binding, glycoside hydrolase; 1.59A {Bacillus halodurans} SCOP: b.18.1.10 PDB: 1w9t_A* 1w9w_A*
Probab=46.30 E-value=75 Score=22.38 Aligned_cols=38 Identities=11% Similarity=0.104 Sum_probs=25.0
Q ss_pred ccceEEEEeeCCCCCCCCC-CCCCeEEEEEeecCcEEEEEEEeCC
Q 030943 92 SRSGFCGMRSKKFDGFIDL-DSYDTIAMKLKGDGRCYISTIYTEN 135 (168)
Q Consensus 92 ~~gGFasvrs~~~~~~~dl-s~y~gl~lrvrGDGr~Y~l~l~t~~ 135 (168)
.+|.|+.++.- |+ +.-..|.+||.+.+..-.|.|+.+.
T Consensus 44 ~~G~wl~y~~v------d~~~G~~~~~~rvas~~~gg~iev~~d~ 82 (142)
T 1w9s_A 44 NDGDWVKYERV------HFERDASSIEVRVASDTPGGRIEIRTGS 82 (142)
T ss_dssp CTTCEEEEEEE------EESSCEEEEEEEEEESSSCEEEEEEESS
T ss_pred CCCCEEEEEeE------ecCCCcEEEEEEEEcCCCCeEEEEEECC
Confidence 57777777742 23 5566788999865544577777764
No 7
>1od3_A Putative xylanase; hydrolase, carbohydrate binding module, beta-sandwich, laminaribiose; HET: BGC; 1.0A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1nae_A* 1o8s_A* 1o8p_A
Probab=46.14 E-value=86 Score=23.06 Aligned_cols=61 Identities=3% Similarity=-0.035 Sum_probs=35.1
Q ss_pred ccceEEEEeeCCCCCCCCC-CCCCeEEEEEeecCcEEEEEEEeCCCcCCCCCCCCCceEEEEEc-CCC--CEEEEEEec
Q 030943 92 SRSGFCGMRSKKFDGFIDL-DSYDTIAMKLKGDGRCYISTIYTENWVNSPGQQEDNSWQSFVFV-PKD--NWYIAKMQR 166 (168)
Q Consensus 92 ~~gGFasvrs~~~~~~~dl-s~y~gl~lrvrGDGr~Y~l~l~t~~~~~~~~~~~~~~~q~~~ft-~~g--~Wqtv~iPf 166 (168)
.+|.++.++.- |+ +.-..|.+||.+.+ ...|.|+.+..- ..+--..-.. ++| .|+++..++
T Consensus 75 ~~G~wl~y~~v------dfg~G~~~~~~rvas~~-~G~ievrlds~~-------G~~lgt~~vp~Tggw~~w~tvt~~v 139 (168)
T 1od3_A 75 ENGYSTTYKNI------DFGDGATSVTARVATQN-ATTIQVRLGSPS-------GTLLGTIYVGSTGSFDTYRDVSATI 139 (168)
T ss_dssp CTTCEEEEEEE------ECTTCEEEEEEEEECSS-CEEEEEEESSTT-------SCEEEEEEECCCSSTTCCEEEEEEE
T ss_pred cCCCEEEEEeE------EeCCCcEEEEEEEEcCC-CcEEEEEECCCC-------CcEEEEEEeCCCCCCcccEEEEEEE
Confidence 57777777643 33 35567888888655 457888877531 1122211122 233 788887765
No 8
>1gui_A Laminarinase 16A; carbohydrate binding module, CBM, glucan, cellulose; HET: BGC; 1.9A {Thermotoga maritima} SCOP: b.18.1.14
Probab=45.48 E-value=77 Score=22.29 Aligned_cols=45 Identities=18% Similarity=0.146 Sum_probs=23.2
Q ss_pred eEEEEEeecC-cEEEEEEEeCCCcCCCCCCCCCceEEEEEcCCCCEEEEEEec
Q 030943 115 TIAMKLKGDG-RCYISTIYTENWVNSPGQQEDNSWQSFVFVPKDNWYIAKMQR 166 (168)
Q Consensus 115 gl~lrvrGDG-r~Y~l~l~t~~~~~~~~~~~~~~~q~~~ft~~g~Wqtv~iPf 166 (168)
-|.+.+|++. +...+.|..... +-..|....+....+|+++.+-|
T Consensus 76 ~lsf~aka~~~~~i~v~l~~~~~-------~~~~~~~~~~~lt~~w~~~~~~f 121 (155)
T 1gui_A 76 TISFKAKADTPRPINVKILQNHD-------PWTNYFAQTVNLTADWQTFTFTY 121 (155)
T ss_dssp EEEEEEEESSCEEEEEEEECSST-------TCCEEEEEEEEECSSCEEEEEEE
T ss_pred EEEEEEEeCCCCcEEEEEEcCCC-------ChHHheeccEeeCCCCEEEEEEE
Confidence 4777777765 555555554311 01122212223345888887766
No 9
>2v4v_A GH59 galactosidase; hydrolase, family 6 carbohydrate binding module, CCCBM6; HET: XYP; 1.50A {Clostridium cellulolyticum}
Probab=35.89 E-value=1.1e+02 Score=21.13 Aligned_cols=39 Identities=8% Similarity=0.079 Sum_probs=24.2
Q ss_pred ccceEEEEeeCCCCCCCCCCCCCeEEEEEeecCcEEEEEEEeCC
Q 030943 92 SRSGFCGMRSKKFDGFIDLDSYDTIAMKLKGDGRCYISTIYTEN 135 (168)
Q Consensus 92 ~~gGFasvrs~~~~~~~dls~y~gl~lrvrGDGr~Y~l~l~t~~ 135 (168)
.+|.++..+...|. +.-..|.+||.+....-.|.|+.+.
T Consensus 34 ~~G~w~~y~~vd~~-----~G~~~~~~rvas~~~gg~ievrlds 72 (129)
T 2v4v_A 34 ENGDYTVYNNVDFG-----DGVGGFQARVASATSGGNIEIRLDS 72 (129)
T ss_dssp CTTCEEEEEEEEEE-----ECCCEEEEEEEESSCCEEEEEEESS
T ss_pred cCCCEEEEEeEecC-----CCeEEEEEEEEcCCCCcEEEEEECC
Confidence 57777777643221 3456789999865444466677664
No 10
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=30.38 E-value=1.6e+02 Score=21.56 Aligned_cols=38 Identities=8% Similarity=0.279 Sum_probs=17.5
Q ss_pred CCeEEeccceecceeeEEEEEecCCCcceEEEEEEEecc
Q 030943 44 KKWHLYSDSEYGGLSSASLEITESGNGMNGIFSGNLSLD 82 (168)
Q Consensus 44 ~~W~~~sD~vmGG~S~~~~~~~~~~~~~~~~F~G~lS~~ 82 (168)
..|.+.+|...|--+...+-+.+..-. -..|+-.+.+.
T Consensus 38 g~W~v~~ggl~~~~~~~~~l~t~~~~~-Df~le~dvk~~ 75 (185)
T 4b1m_A 38 GTWADTIEGKQGRSDGDSFILSSASGS-DFTYESDITIK 75 (185)
T ss_dssp SEEEEETTEEEEEEEEEEEEEEEEEES-SEEEEEEEEEE
T ss_pred CeEEEeCCcEEEecCCCcEEEcCCCcc-CEEEEEEEEEc
Confidence 457777777665222223333222111 14566666544
No 11
>1uxx_X Xylanase U; carbohydrate binding module, CBM6, xylopentaose binding, xylan degradation; HET: XYP; 1.6A {Clostridium thermocellum} SCOP: b.18.1.10 PDB: 1gmm_A*
Probab=28.49 E-value=1.5e+02 Score=20.56 Aligned_cols=39 Identities=3% Similarity=0.067 Sum_probs=23.5
Q ss_pred ccceEEEEeeCCCCCCCCCCCCCeEEEEEeecCc-EEEEEEEeCC
Q 030943 92 SRSGFCGMRSKKFDGFIDLDSYDTIAMKLKGDGR-CYISTIYTEN 135 (168)
Q Consensus 92 ~~gGFasvrs~~~~~~~dls~y~gl~lrvrGDGr-~Y~l~l~t~~ 135 (168)
.+|.|+.++.-.|. +.-..|.+||.+... -..|.|+.+.
T Consensus 36 ~~G~wl~y~~vd~~-----~G~~~~~~rvas~~~~gg~ievr~ds 75 (133)
T 1uxx_X 36 ESGDYLVFNKINFG-----NGANSFKARVASGADTPTNIQLRLGS 75 (133)
T ss_dssp CTTCEEEEEEEECC-----SCEEEEEEEEEECCSSCEEEEEEESS
T ss_pred cCCCEEEEEEEEcC-----CCcEEEEEEEEeCCCCCcEEEEEECC
Confidence 57777777653221 345668888876532 3556666664
No 12
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A
Probab=24.39 E-value=2.3e+02 Score=26.98 Aligned_cols=93 Identities=16% Similarity=0.227 Sum_probs=51.6
Q ss_pred ceeeEEEEEecC-CCcceEEEEEEEecccCCCCccccccceEEEEeeCCCCCCCCCCCCCeEEEEEeec-CcEEEEEEEe
Q 030943 56 GLSSASLEITES-GNGMNGIFSGNLSLDLSEGSKWNISRSGFCGMRSKKFDGFIDLDSYDTIAMKLKGD-GRCYISTIYT 133 (168)
Q Consensus 56 G~S~~~~~~~~~-~~~~~~~F~G~lS~~~p~~~~~~~~~gGFasvrs~~~~~~~dls~y~gl~lrvrGD-Gr~Y~l~l~t 133 (168)
+.-++.+...+. ..|.+++|+|.|.- .+...||- |...+.+..=.-|.|.+|++ +-.-.|.|.+
T Consensus 558 ~~l~~~~d~~DAy~GGSSL~l~G~l~~------------~~~~~irL--Fkt~L~v~~~~~l~l~~K~~~~s~l~l~L~~ 623 (937)
T 3gdb_A 558 EKLRAEYDFTDAYNGGNSLKFSGDVAG------------KTDQDVRL--YSTKLEVTEKTKLRVAHKGGKGSKVYMAFST 623 (937)
T ss_dssp CCCEEEEESSCCSSBSCEEEEEEEECS------------SEEEEEEE--EEEEEECCTTCEEEEEEEECTTSEEEEEEEC
T ss_pred CceEEEEecccccCCcceEEEEEEcCC------------CCceeEEE--EeecccCCCCCEEEEEEecCCCceEEEEEEc
Confidence 444555554321 12347999999852 33344443 43345555555688999975 5566677766
Q ss_pred CCCcCCCCCCCCCceEEEEEcCCCCEEEEEEecC
Q 030943 134 ENWVNSPGQQEDNSWQSFVFVPKDNWYIAKMQRW 167 (168)
Q Consensus 134 ~~~~~~~~~~~~~~~q~~~ft~~g~Wqtv~iPfs 167 (168)
...... .....| ...+..++|+++.++++
T Consensus 624 ~~~~~~---~~~~~~--~~~~~~~~Wt~~t~dLs 652 (937)
T 3gdb_A 624 TPDYKF---DDADAW--KELTLSDNWTNEEFDLS 652 (937)
T ss_dssp STTCCC---CCGGGE--EECCCEEEEEEEEEECG
T ss_pred CCCcee---cccccc--cccccCCCcEEEEEEcc
Confidence 533210 001123 22345679999998875
No 13
>3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A*
Probab=21.82 E-value=2.4e+02 Score=23.76 Aligned_cols=37 Identities=3% Similarity=0.036 Sum_probs=23.3
Q ss_pred ccceEEEEeeCCCCCCCCCC--CCCeEEEEEeecCcEEEEEEEeCC
Q 030943 92 SRSGFCGMRSKKFDGFIDLD--SYDTIAMKLKGDGRCYISTIYTEN 135 (168)
Q Consensus 92 ~~gGFasvrs~~~~~~~dls--~y~gl~lrvrGDGr~Y~l~l~t~~ 135 (168)
.+|.++.++. +|+. ....|.+||++ ...-.|.|+.+.
T Consensus 390 ~~g~~~~~~~------vdf~~~g~~~~~~~vas-~~~g~ievr~~s 428 (487)
T 3c7f_A 390 QNGDWIAVGN------ADFGAGGARSFKANVAS-TLGGKIEVRLDS 428 (487)
T ss_dssp CTTCEEEEEE------EECTTTCEEEEEEEEEE-SSCEEEEEEESS
T ss_pred cCCCEEEEee------eeeCCCCccEEEEEEEe-CCCcEEEEEECC
Confidence 4556666554 3443 56778899987 434477777764
No 14
>1gu3_A Endoglucanase C; carbohydrate-binding module, carbohydrate binding module, CBM, cellulose; HET: BGC; 2.3A {Cellulomonas fimi} SCOP: b.18.1.14 PDB: 1ulo_A 1ulp_A
Probab=21.01 E-value=2e+02 Score=20.51 Aligned_cols=42 Identities=0% Similarity=-0.156 Sum_probs=24.1
Q ss_pred EEEEEeecC-cEEEEEEEeCCCcCCCCCCCCCceEEEE---EcCCCCEEEEEEecC
Q 030943 116 IAMKLKGDG-RCYISTIYTENWVNSPGQQEDNSWQSFV---FVPKDNWYIAKMQRW 167 (168)
Q Consensus 116 l~lrvrGDG-r~Y~l~l~t~~~~~~~~~~~~~~~q~~~---ft~~g~Wqtv~iPfs 167 (168)
|.+.+|.+. |.-.+.|.... ..|..++ +.-..+||++.+.|.
T Consensus 62 lsF~A~as~~r~i~v~i~~~~----------~~y~~y~~~~~~lt~~~q~yt~tFT 107 (149)
T 1gu3_A 62 LRYTATASTDVTVRALVGQNG----------APYGTVLDTSPALTSEPRQVTETFT 107 (149)
T ss_dssp EEEEEEESSCEECEEEEEESS----------TTCCEEEEECCEECSSCEEEEEEEE
T ss_pred EEEEEEeCCCcEEEEEEecCC----------CChhhheeeeeEcCCCceEEEEEEE
Confidence 566666653 55566665442 1343322 223668999998884
No 15
>2eke_C Ubiquitin-like protein SMT3; UBC9, SUMO binding motif, SBM, ligase/protein binding complex; 1.90A {Saccharomyces cerevisiae} SCOP: d.15.1.1
Probab=20.32 E-value=1.2e+02 Score=20.77 Aligned_cols=26 Identities=12% Similarity=0.027 Sum_probs=21.4
Q ss_pred CCCCeEEEEEeecCcEEEEEEEeCCC
Q 030943 111 DSYDTIAMKLKGDGRCYISTIYTENW 136 (168)
Q Consensus 111 s~y~gl~lrvrGDGr~Y~l~l~t~~~ 136 (168)
..-+.|.|+|+++|+.-.+.++.++.
T Consensus 27 ~~~~~I~IkV~~~g~~i~fkIk~tt~ 52 (106)
T 2eke_C 27 KPETHINLKVSDGSSEIFFKIKKTTP 52 (106)
T ss_dssp CCCSEEEEEEECSSCEEEEEEETTSC
T ss_pred CCCCeEEEEEecCCcEEEEEeCCCCH
Confidence 34478999999999999999988754
Done!