Query 030947
Match_columns 168
No_of_seqs 155 out of 1545
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 10:47:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030947.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030947hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u53_A BIS(5'-nucleosyl)-tetra 99.9 2E-21 6.9E-26 145.8 15.0 110 41-153 5-145 (155)
2 3i7u_A AP4A hydrolase; nudix p 99.9 8.7E-22 3E-26 145.6 12.4 99 39-151 4-130 (134)
3 3son_A Hypothetical nudix hydr 99.8 1.1E-18 3.7E-23 129.3 15.2 105 40-153 6-144 (149)
4 1ktg_A Diadenosine tetraphosph 99.8 1.9E-18 6.6E-23 125.8 14.8 104 39-151 3-136 (138)
5 3fcm_A Hydrolase, nudix family 99.8 6.9E-19 2.4E-23 137.2 12.8 107 37-154 43-188 (197)
6 3i9x_A MUTT/nudix family prote 99.8 4.7E-19 1.6E-23 136.9 10.9 109 37-154 25-176 (187)
7 3gg6_A Nudix motif 18, nucleos 99.8 4.3E-19 1.5E-23 132.4 9.5 92 63-154 32-151 (156)
8 2pbt_A AP4A hydrolase; nudix p 99.8 1.7E-18 5.9E-23 125.3 12.4 99 40-152 5-131 (134)
9 1vcd_A NDX1; nudix protein, di 99.8 2.7E-18 9.4E-23 123.2 11.8 98 40-150 3-124 (126)
10 1k2e_A Nudix homolog; nudix/MU 99.8 2.5E-18 8.5E-23 129.0 9.6 100 40-152 2-138 (156)
11 3grn_A MUTT related protein; s 99.8 1.2E-17 4.1E-22 124.4 13.2 102 37-150 6-137 (153)
12 3q1p_A Phosphohydrolase (MUTT/ 99.8 2.6E-18 9E-23 135.2 9.2 107 37-156 66-201 (205)
13 3f6a_A Hydrolase, nudix family 99.7 6.1E-18 2.1E-22 126.9 9.9 95 38-145 5-146 (159)
14 3fjy_A Probable MUTT1 protein; 99.7 1.1E-17 3.7E-22 142.0 12.7 115 40-154 4-179 (364)
15 3gwy_A Putative CTP pyrophosph 99.7 1.6E-17 5.4E-22 122.0 10.9 86 64-149 18-132 (140)
16 2o1c_A DATP pyrophosphohydrola 99.7 1.3E-17 4.3E-22 122.5 10.2 99 40-149 10-148 (150)
17 2azw_A MUTT/nudix family prote 99.7 2.7E-17 9.1E-22 120.9 11.5 98 38-147 17-144 (148)
18 2fvv_A Diphosphoinositol polyp 99.7 8.7E-18 3E-22 131.6 9.2 114 13-136 13-153 (194)
19 4dyw_A MUTT/nudix family prote 99.7 1.6E-17 5.3E-22 124.9 10.0 96 37-146 27-153 (157)
20 3gz5_A MUTT/nudix family prote 99.7 2E-17 6.8E-22 133.7 11.0 108 37-153 20-159 (240)
21 3h95_A Nucleoside diphosphate- 99.7 5.4E-17 1.8E-21 126.7 13.1 95 37-142 24-149 (199)
22 3o8s_A Nudix hydrolase, ADP-ri 99.7 1.6E-17 5.5E-22 130.8 9.4 105 38-156 69-202 (206)
23 3id9_A MUTT/nudix family prote 99.7 1.5E-17 5E-22 126.0 8.6 98 37-147 21-149 (171)
24 3hhj_A Mutator MUTT protein; n 99.7 2.9E-17 1E-21 122.8 10.0 87 63-149 41-156 (158)
25 2yyh_A MUTT domain, 8-OXO-DGTP 99.7 8E-17 2.7E-21 117.9 12.1 100 37-147 7-135 (139)
26 3cng_A Nudix hydrolase; struct 99.7 7.8E-17 2.7E-21 124.9 12.6 106 38-156 39-170 (189)
27 2jvb_A Protein PSU1, mRNA-deca 99.7 1.8E-17 6E-22 122.2 8.0 87 41-138 6-119 (146)
28 2b0v_A Nudix hydrolase; struct 99.7 1.3E-16 4.6E-21 117.9 12.0 82 64-145 20-135 (153)
29 3r03_A Nudix hydrolase; struct 99.7 3.9E-17 1.4E-21 119.6 8.9 89 63-151 20-137 (144)
30 3ees_A Probable pyrophosphohyd 99.7 9.1E-17 3.1E-21 118.4 10.8 88 64-151 34-148 (153)
31 3shd_A Phosphatase NUDJ; nudix 99.7 1.2E-16 4.1E-21 118.5 11.0 84 64-147 17-131 (153)
32 1f3y_A Diadenosine 5',5'''-P1, 99.7 1.7E-16 5.9E-21 118.3 11.9 102 37-151 12-162 (165)
33 3fk9_A Mutator MUTT protein; s 99.7 6.7E-17 2.3E-21 125.5 9.7 85 64-148 16-129 (188)
34 3oga_A Nucleoside triphosphata 99.7 2E-16 6.7E-21 119.1 11.7 82 64-145 40-161 (165)
35 2fb1_A Conserved hypothetical 99.7 4.7E-17 1.6E-21 130.3 7.9 104 37-151 11-144 (226)
36 3exq_A Nudix family hydrolase; 99.7 3.5E-17 1.2E-21 123.4 6.6 100 38-148 9-136 (161)
37 2rrk_A ORF135, CTP pyrophospho 99.7 2.9E-16 9.9E-21 114.3 11.2 87 64-150 21-134 (140)
38 3q93_A 7,8-dihydro-8-oxoguanin 99.7 1.5E-16 5.2E-21 122.1 9.9 86 63-148 36-149 (176)
39 1rya_A GDP-mannose mannosyl hy 99.7 4.7E-16 1.6E-20 115.7 11.6 96 38-145 17-151 (160)
40 2fkb_A Putative nudix hydrolas 99.7 7.4E-16 2.5E-20 117.4 12.8 104 38-153 36-171 (180)
41 2kdv_A RNA pyrophosphohydrolas 99.7 5.3E-16 1.8E-20 117.8 11.7 58 37-106 6-63 (164)
42 2w4e_A MUTT/nudix family prote 99.7 1.2E-15 4E-20 113.1 13.2 84 40-135 6-119 (145)
43 3f13_A Putative nudix hydrolas 99.7 3E-16 1E-20 119.6 9.5 86 64-151 28-132 (163)
44 2pqv_A MUTT/nudix family prote 99.7 1.4E-16 4.8E-21 118.4 7.4 87 37-138 17-134 (154)
45 1sjy_A MUTT/nudix family prote 99.7 7.2E-16 2.5E-20 114.6 10.9 88 38-137 12-134 (159)
46 3eds_A MUTT/nudix family prote 99.6 1.6E-16 5.6E-21 118.6 5.8 75 63-138 33-141 (153)
47 1hzt_A Isopentenyl diphosphate 99.6 2.6E-15 8.8E-20 115.9 12.2 100 38-149 31-172 (190)
48 2yvp_A NDX2, MUTT/nudix family 99.6 5.3E-16 1.8E-20 118.8 7.8 75 63-137 53-158 (182)
49 2qjo_A Bifunctional NMN adenyl 99.6 1.6E-15 5.6E-20 126.1 10.5 99 38-149 202-340 (341)
50 1nqz_A COA pyrophosphatase (MU 99.6 1.9E-15 6.5E-20 116.9 9.7 89 37-135 32-153 (194)
51 2b06_A MUTT/nudix family prote 99.6 1.6E-15 5.6E-20 112.6 8.9 101 38-147 7-133 (155)
52 1mut_A MUTT, nucleoside tripho 99.6 2.9E-16 1E-20 112.6 3.9 84 63-146 16-126 (129)
53 2fml_A MUTT/nudix family prote 99.6 4.1E-15 1.4E-19 122.1 11.3 90 37-133 37-157 (273)
54 2qjt_B Nicotinamide-nucleotide 99.6 4.2E-15 1.4E-19 124.5 11.6 99 39-150 208-348 (352)
55 1vhz_A ADP compounds hydrolase 99.6 2.9E-15 9.8E-20 117.4 8.7 76 64-139 61-166 (198)
56 1vk6_A NADH pyrophosphatase; 1 99.6 5.3E-15 1.8E-19 121.8 10.6 90 63-152 151-266 (269)
57 2a6t_A SPAC19A8.12; alpha/beta 99.6 2.6E-15 9.1E-20 123.5 8.8 86 40-136 102-215 (271)
58 1v8y_A ADP-ribose pyrophosphat 99.6 3.2E-15 1.1E-19 113.4 7.7 87 39-139 34-150 (170)
59 1q27_A Putative nudix hydrolas 99.6 6.6E-15 2.3E-19 111.3 9.0 100 39-150 34-167 (171)
60 3o6z_A GDP-mannose pyrophospha 99.6 6E-15 2.1E-19 114.7 8.8 88 40-139 46-172 (191)
61 1x51_A A/G-specific adenine DN 99.6 4.5E-14 1.6E-18 105.2 11.6 87 62-148 33-148 (155)
62 1mk1_A ADPR pyrophosphatase; n 99.5 8.3E-15 2.8E-19 115.1 7.8 75 63-137 55-162 (207)
63 3q91_A Uridine diphosphate glu 99.5 9E-15 3.1E-19 116.9 7.9 67 73-139 94-194 (218)
64 1g0s_A Hypothetical 23.7 kDa p 99.5 1.2E-14 4.3E-19 114.6 8.6 87 40-137 58-183 (209)
65 1q33_A Pyrophosphatase, ADP-ri 99.5 9.4E-14 3.2E-18 115.3 12.4 114 38-153 109-280 (292)
66 3e57_A Uncharacterized protein 99.5 2.3E-14 7.8E-19 114.4 8.0 100 23-134 47-189 (211)
67 2dsc_A ADP-sugar pyrophosphata 99.5 6.2E-14 2.1E-18 110.5 9.9 74 62-135 76-185 (212)
68 3fsp_A A/G-specific adenine gl 99.4 1.1E-12 3.9E-17 111.8 8.1 87 63-150 252-362 (369)
69 3qsj_A Nudix hydrolase; struct 99.3 6.7E-12 2.3E-16 101.3 11.4 60 37-105 6-91 (232)
70 1u20_A U8 snoRNA-binding prote 99.3 8.1E-12 2.8E-16 98.7 9.0 66 37-106 31-99 (212)
71 3rh7_A Hypothetical oxidoreduc 99.3 6.8E-12 2.3E-16 105.6 7.6 101 38-156 182-300 (321)
72 2dho_A Isopentenyl-diphosphate 99.2 6.9E-11 2.4E-15 95.2 12.0 85 38-134 58-191 (235)
73 2pny_A Isopentenyl-diphosphate 99.2 6E-11 2.1E-15 96.2 11.5 85 38-134 69-202 (246)
74 3dup_A MUTT/nudix family prote 99.1 3E-10 1E-14 94.8 11.3 89 39-136 118-245 (300)
75 2xsq_A U8 snoRNA-decapping enz 99.1 9.6E-11 3.3E-15 93.3 5.9 42 64-106 66-108 (217)
76 3bho_A Cleavage and polyadenyl 99.0 3E-10 1E-14 89.9 6.6 61 33-103 51-112 (208)
77 3kvh_A Protein syndesmos; NUDT 98.9 1.2E-09 4.2E-14 86.0 4.0 64 37-103 19-84 (214)
No 1
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.87 E-value=2e-21 Score=145.80 Aligned_cols=110 Identities=27% Similarity=0.275 Sum_probs=85.8
Q ss_pred EEEEEEEEeeccccccccccCceEEEEEEEeC-CCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc--------
Q 030947 41 VVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL-------- 111 (168)
Q Consensus 41 ~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~-------- 111 (168)
++|+|+|+... .....+++.+|||+++++ .+.|.||||+++.|||+.+||.||++||||+.+.....+
T Consensus 5 a~G~iifr~~~---~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 81 (155)
T 3u53_A 5 ACGLIIFRRCL---IPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELN 81 (155)
T ss_dssp EEEEEEEEECC---CSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEE
T ss_pred EeEEEEEcccc---ccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeeeEeeeee
Confidence 57899998531 111222678999999876 478999999999999999999999999999986543300
Q ss_pred ----------------------cccCCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHhcc
Q 030947 112 ----------------------AEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQ 153 (168)
Q Consensus 112 ----------------------~~~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~~~ 153 (168)
...+..|..+++|++++|+.+++.+++++.++.++.+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~ea~~~~~~~~~~~~L~~a~~~L~~~ 145 (155)
T 3u53_A 82 YVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKEMKAALQEGHQFLCSI 145 (155)
T ss_dssp EEETTEEEEEEEEEEEESCTTCCCCCCTTEEEEEEECHHHHHHHHCSHHHHHHHHHHHHHHHHH
T ss_pred cCCCcceeEEEEEEEEEeccCCccCCCcceeEEEEeEHHHHHHHcCCHHHHHHHHHHHHHHhCc
Confidence 001233778899999999999999999999999888877653
No 2
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.87 E-value=8.7e-22 Score=145.62 Aligned_cols=99 Identities=29% Similarity=0.392 Sum_probs=80.1
Q ss_pred eeEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc-------
Q 030947 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL------- 111 (168)
Q Consensus 39 r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~------- 111 (168)
+.++|+|+++.+ +|||+++. .|.|.||||+++.|||+.+||.||++||||+++.....+
T Consensus 4 ~~aag~vv~~~~-------------~vLL~~r~-~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~ 69 (134)
T 3i7u_A 4 EFSAGGVLFKDG-------------EVLLIKTP-SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWY 69 (134)
T ss_dssp EEEEEEEEEETT-------------EEEEEECT-TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEECC-------------EEEEEEeC-CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeeeeeeeeEEe
Confidence 467889998742 89999865 478999999999999999999999999999987544310
Q ss_pred -----------cc----------cCCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHh
Q 030947 112 -----------AE----------WPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLT 151 (168)
Q Consensus 112 -----------~~----------~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~ 151 (168)
.. -+..|+.+++||+++++++++.++..+.++.++.+.+.
T Consensus 70 ~~~~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~e~~~~l~~~~~r~il~~a~~l~~ 130 (134)
T 3i7u_A 70 TLKGERIFKTVKYYLMKYKEGEPRPSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLKE 130 (134)
T ss_dssp EETTEEEEEEEEEEEEEEEEECCCCCTTSSEEEEEEHHHHHHHBCSHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEEEEEEEEcCCcCcCChhheEEEEEEHHHHhhhcCChHHHHHHHHHHHHHH
Confidence 00 13347788999999999999999999998888776554
No 3
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.81 E-value=1.1e-18 Score=129.34 Aligned_cols=105 Identities=26% Similarity=0.248 Sum_probs=85.1
Q ss_pred eEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceec----------
Q 030947 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVED---------- 109 (168)
Q Consensus 40 ~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~---------- 109 (168)
..+++++|... + ++.+|||+++.+.+.|.||||+++.|||+.+||.||++||||+++....
T Consensus 6 ~~v~vvi~~~~---~------~~~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 76 (149)
T 3son_A 6 FQVLVIPFIKT---E------ANYQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIP 76 (149)
T ss_dssp CEEEEEEEEEC---S------SSEEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEE
T ss_pred eEEEEEEEEec---C------CCeEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeeccc
Confidence 46777887654 2 4569999999988999999999999999999999999999999865420
Q ss_pred ----------------cccccC--------CCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHhcc
Q 030947 110 ----------------QLAEWP--------EKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQ 153 (168)
Q Consensus 110 ----------------~~~~~~--------e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~~~ 153 (168)
.....+ ..|..+++|++++++.+++..+..+.++..+.+++..+
T Consensus 77 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 144 (149)
T 3son_A 77 NFHFSFNKPYVVPEYCFAIDLTSCSYQVTLSLEHSELRWVSYESAIQLLEWDSNKTALYELNERLKNN 144 (149)
T ss_dssp GGGTCSSSCSEEEEEEEEEECTTTGGGCCCCTTEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHTT
T ss_pred ceeeccCCceEeEEEEEEEEcCCCCCcccCCCceeeEEEeCHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 000001 14677899999999999999999999999999888766
No 4
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.80 E-value=1.9e-18 Score=125.85 Aligned_cols=104 Identities=26% Similarity=0.296 Sum_probs=80.7
Q ss_pred eeEEEEEEEEeeccccccccccCceEEEEEEEeC-CCceeccceeccCCCCHHHHHHHHHHHHHcCc---ccee-c----
Q 030947 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVT---GIVE-D---- 109 (168)
Q Consensus 39 r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~---~~~~-~---- 109 (168)
+..+++++++.+ + ++.+|||++++. ++.|.||||+++.||++.+||.||++||||+. .... .
T Consensus 3 ~~~~~~vi~~~~---~------~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~ 73 (138)
T 1ktg_A 3 VKAAGLVIYRKL---A------GKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHET 73 (138)
T ss_dssp EEEEEEEEEEEE---T------TEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEE
T ss_pred eEEEEEEEEEec---C------CCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccce
Confidence 457888898864 1 346899999873 46899999999999999999999999999994 3322 1
Q ss_pred --------------c---c----cccCCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHh
Q 030947 110 --------------Q---L----AEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLT 151 (168)
Q Consensus 110 --------------~---~----~~~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~ 151 (168)
. . ...+..+..++.|++++++.++..++.++.++..+.+++.
T Consensus 74 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 136 (138)
T 1ktg_A 74 LFYEAKGKPKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIADYAEMGSLLRKFSAFLA 136 (138)
T ss_dssp EEEEETTEEEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHHhhccchHHHHHHHHHHHhh
Confidence 0 0 0012336678999999999999999988888888877663
No 5
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.80 E-value=6.9e-19 Score=137.16 Aligned_cols=107 Identities=19% Similarity=0.212 Sum_probs=82.9
Q ss_pred CceeEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCc-cceec------
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVT-GIVED------ 109 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~-~~~~~------ 109 (168)
.++..+++++++. ++.+|||++++..+.|.||||+++.|||+.+||+||++||||++ +....
T Consensus 43 ~~h~~~~~vv~~~-----------~~~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~ 111 (197)
T 3fcm_A 43 IAHLTSSAFAVNK-----------ERNKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFAL 111 (197)
T ss_dssp SEEEEEEEEEECT-----------TSCEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEE
T ss_pred CccEEEEEEEEEC-----------CCCEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEE
Confidence 5677888888864 23489999999889999999999999999999999999999998 43211
Q ss_pred ----c-----------------ccc-----------cCCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHhccc
Q 030947 110 ----Q-----------------LAE-----------WPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQQ 154 (168)
Q Consensus 110 ----~-----------------~~~-----------~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~ 154 (168)
. ..+ .+..|..+++|++++++.+++..+.++.++.++.+++..+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~l~~~~ 188 (197)
T 3fcm_A 112 DVLTVNGHIKRGKYVSSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYCSEPHMIPIYEKLINKLKTQS 188 (197)
T ss_dssp EEEEECCEEETTEEECCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHCCCGGGHHHHHHHHHHHHC--
T ss_pred EEeeecCccccCcccCCceeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhhcCCHHHHHHHHHHHHHHHhcc
Confidence 0 000 01236678999999999999999999999999999988763
No 6
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.79 E-value=4.7e-19 Score=136.90 Aligned_cols=109 Identities=20% Similarity=0.159 Sum_probs=84.7
Q ss_pred CceeEEEEEEEEeeccccccccccC----ceEEEEEEEe----------CCCceeccceeccCCCCHHHHHHHHHHHHHc
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEE----DLEVLVISSQ----------KGKGMLFPKGGWEIDESIQEAALRETIEEAG 102 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~----~~~vLLv~r~----------~~~~W~lPgG~ve~gEt~~~aA~REl~EEtG 102 (168)
..++.+++++|..+ + + +.+|||+++. ..+.|.||||+++.|||+.+||+||++||||
T Consensus 25 p~~~~v~~vv~~~~---~------~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtG 95 (187)
T 3i9x_A 25 PDGYTSDMILTTVK---E------LNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETS 95 (187)
T ss_dssp CSEEEEEEEEEEEE---E------ETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHC
T ss_pred cccceEEEEEEEEc---C------CCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHC
Confidence 44588999999875 1 3 4699999993 3588999999999999999999999999999
Q ss_pred Cccceeccccc-----------------------------cCCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHhcc
Q 030947 103 VTGIVEDQLAE-----------------------------WPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQ 153 (168)
Q Consensus 103 i~~~~~~~~~~-----------------------------~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~~~ 153 (168)
+++.....+.. .+..|..+++|+++++++++...+..+.++..+++++.++
T Consensus 96 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~~~~il~~a~~~l~~~ 175 (187)
T 3i9x_A 96 LTDIPLIPFGVFDKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHLDMLKKAFSAITEE 175 (187)
T ss_dssp CCSCCCEEEEEECCTTSSTTSSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTSCBSTTHHHHHHHHHHHHHHH
T ss_pred CCCcceEEEEEEcCCccCCCCCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccCCCCccHHHHHHHHHHHHHhh
Confidence 98654441100 0123567799999999998766667888888888877764
Q ss_pred c
Q 030947 154 Q 154 (168)
Q Consensus 154 ~ 154 (168)
.
T Consensus 176 ~ 176 (187)
T 3i9x_A 176 F 176 (187)
T ss_dssp H
T ss_pred h
Confidence 3
No 7
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.79 E-value=4.3e-19 Score=132.45 Aligned_cols=92 Identities=23% Similarity=0.219 Sum_probs=75.2
Q ss_pred eEEEEEEEeC---CCceeccceeccCCCCHHHHHHHHHHHHHcCccceecccc-------------------------cc
Q 030947 63 LEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQLA-------------------------EW 114 (168)
Q Consensus 63 ~~vLLv~r~~---~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~~-------------------------~~ 114 (168)
.+|||+++.+ .+.|.||||+++.|||+.+||.||++||||+++.....+. ..
T Consensus 32 ~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 111 (156)
T 3gg6_A 32 DEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEERGPSWVRFVFLARPTGGILKTSKE 111 (156)
T ss_dssp SEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEESSTTEEEEEEEEEEEEECCCCGGG
T ss_pred CEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeeeEEEEEcCCCCEEEEEEEEEeeCCeeccCCC
Confidence 4899999986 5899999999999999999999999999999876554110 01
Q ss_pred CCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHhccc
Q 030947 115 PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQQ 154 (168)
Q Consensus 115 ~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~ 154 (168)
++.|..+++|++++++++++..+.++.++..+...+..+.
T Consensus 112 ~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~~~ 151 (156)
T 3gg6_A 112 ADAESLQAAWYPRTSLPTPLRAHDILHLVELAAQYRQQAR 151 (156)
T ss_dssp CSSSCSEEEEEETTSCCSSBSCTHHHHHHHHHHHHHHHHH
T ss_pred CCcceeeeEEEcHHHCcccccchhHHHHHHHHHHHhhcCC
Confidence 2246778999999999999999989888888777766543
No 8
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.78 E-value=1.7e-18 Score=125.31 Aligned_cols=99 Identities=29% Similarity=0.410 Sum_probs=78.9
Q ss_pred eEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc--------
Q 030947 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL-------- 111 (168)
Q Consensus 40 ~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~-------- 111 (168)
..+++++++. + +|||+++.+ +.|.||||+++.|||+.+||.||++||||+.+.....+
T Consensus 5 ~~~~~vi~~~-----------~--~vLl~~r~~-~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~ 70 (134)
T 2pbt_A 5 FSAGGVLFKD-----------G--EVLLIKTPS-NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYT 70 (134)
T ss_dssp EEEEEEEEET-----------T--EEEEEECTT-SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEE
T ss_pred eEEEEEEEEC-----------C--EEEEEEeCC-CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeeeeeEEEEEee
Confidence 4567777762 1 899999877 89999999999999999999999999999986544311
Q ss_pred ----------ccc----------CCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHhc
Q 030947 112 ----------AEW----------PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTS 152 (168)
Q Consensus 112 ----------~~~----------~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~~ 152 (168)
..| +..+..++.|++++++.+++.++.++.++..+.+.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~ 131 (134)
T 2pbt_A 71 LKGERIFKTVKYYLMKYKEGEPRPSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLKEK 131 (134)
T ss_dssp ETTEEEEEEEEEEEEEEEEECCCCCTTSSEEEEEEHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEEEEEEEecCCCcCCCcceeEEEEEcHHHHHhhhcchhHHHHHHHHHHHhhh
Confidence 000 12266789999999999999999999999888877653
No 9
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.77 E-value=2.7e-18 Score=123.22 Aligned_cols=98 Identities=33% Similarity=0.344 Sum_probs=77.1
Q ss_pred eEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc--------
Q 030947 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL-------- 111 (168)
Q Consensus 40 ~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~-------- 111 (168)
..+++++++.+ .+|||+++.+ |.|.||||+++.||++.+||.||++||||+.+.....+
T Consensus 3 ~~~~~vi~~~~------------~~vLl~~r~~-g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~ 69 (126)
T 1vcd_A 3 LGAGGVVFNAK------------REVLLLRDRM-GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLPLYPTRYVNP 69 (126)
T ss_dssp EEEEEEEECTT------------SCEEEEECTT-SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEECT
T ss_pred eEEEEEEEcCC------------CEEEEEEECC-CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccEEeEEEEecC
Confidence 35677777632 3799999876 89999999999999999999999999999987543300
Q ss_pred ------c----------ccCCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHH
Q 030947 112 ------A----------EWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRL 150 (168)
Q Consensus 112 ------~----------~~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~ 150 (168)
. ..++.+..++.|++++++.+++.++.++.++..+.+++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~w~~~~el~~~~~~~~~~~~l~~~~~~l 124 (126)
T 1vcd_A 70 KGVEREVHWFLMRGEGAPRLEEGMTGAGWFSPEEARALLAFPEDLGLLEVALERL 124 (126)
T ss_dssp TSCEEEEEEEEEEEESCCCCCTTCCEEEEECHHHHHHHBCSHHHHHHHHHHHHHS
T ss_pred CceEEEEEEEEEEcCCCCCCCcceeeeEEcCHHHHHHhhcChhHHHHHHHHHHhc
Confidence 0 01233667899999999999999998888888776653
No 10
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.76 E-value=2.5e-18 Score=128.95 Aligned_cols=100 Identities=18% Similarity=0.226 Sum_probs=78.6
Q ss_pred eEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceecccc-------
Q 030947 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQLA------- 112 (168)
Q Consensus 40 ~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~~------- 112 (168)
.++++++++ + ++|||+++.+.|.|.||||+++.|||+.+||.||++||||+++.....+.
T Consensus 2 ~~~~~vi~~-~------------~~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 68 (156)
T 1k2e_A 2 IVTSGVLVE-N------------GKVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGFTYGIIDENA 68 (156)
T ss_dssp EEEEEECEE-T------------TEEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECCCCCCCBSSSE
T ss_pred eEEEEEEEE-C------------CEEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceeccceeeeccccc
Confidence 467777776 2 17999999888899999999999999999999999999999875443210
Q ss_pred --------------cc----------------CCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHhc
Q 030947 113 --------------EW----------------PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTS 152 (168)
Q Consensus 113 --------------~~----------------~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~~ 152 (168)
.+ +..+..+++|+++++++++...+.++.++..+.+.+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~ 138 (156)
T 1k2e_A 69 VERPMPLVILEEVVKYPEETHIHFDLIYLVKRVGGDLKNGEWIDVREIDRIETFPNVRKVVSLALSTLYR 138 (156)
T ss_dssp EECCCCSEEEEEEEECSSCEEEEEEEEEEEEEEEECCCSCEEEEGGGGGGSCBSTTHHHHHHHHHHHHHH
T ss_pred ccccccceeeeeeecCCCCceEEEEEEEEEEecCCcEeeeEEeCHHHHhcCCCChHHHHHHHHHHHHHHh
Confidence 01 12245678999999999988888888888887776543
No 11
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.76 E-value=1.2e-17 Score=124.35 Aligned_cols=102 Identities=19% Similarity=0.167 Sum_probs=78.8
Q ss_pred CceeEEEEEEEEeeccccccccccCceEEEEEEEeCC-----CceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL 111 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~-----~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~ 111 (168)
.++..+++++++. +.+|||++|... +.|.||||+++.||++.+||.||++||||+.+.....+
T Consensus 6 ~~~~~v~~vi~~~------------~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~ 73 (153)
T 3grn_A 6 PYIISVYALIRNE------------KGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIA 73 (153)
T ss_dssp CEEEEEEEEEECT------------TCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSEE
T ss_pred ceEEEEEEEEEcC------------CCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceEE
Confidence 4567778888753 237999998853 78999999999999999999999999999987644411
Q ss_pred -------------------ccc-----CCCceeeEEEEeHhHHHhhc-CChhHHHHHHHHHHHH
Q 030947 112 -------------------AEW-----PEKNVRSRKWMSVAEARKVC-QHWWMKEALDRLVMRL 150 (168)
Q Consensus 112 -------------------~~~-----~e~e~~~~~W~~~~e~~~~~-~~~~~~~~l~~~~~~~ 150 (168)
... +..+..+++|++++++.++. ..+.++.++..+.+.-
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~l~~~~ 137 (153)
T 3grn_A 74 GQVNFELTEKKVIAIVFDGGYVVADVKLSYEHIEYSWVSLEKILGMETLPAYFRDFFERFDREN 137 (153)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCCCCCCTTEEEEEEECHHHHTTCSSSCHHHHHHHHHHHHHH
T ss_pred EEEEEecCCceEEEEEEEEEecCCcEecCCCcceEEEEEHHHhhhcccchHHHHHHHHHHhccc
Confidence 000 12367789999999999988 7787878777765543
No 12
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.75 E-value=2.6e-18 Score=135.20 Aligned_cols=107 Identities=12% Similarity=0.144 Sum_probs=83.5
Q ss_pred CceeEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceecccc----
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQLA---- 112 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~~---- 112 (168)
..+..+++++++. .+|||+++...|.|.||||+++.|||+.+||.||++||||+.+.....+.
T Consensus 66 ~~~~~v~~vv~~~-------------~~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~l~~~~~ 132 (205)
T 3q1p_A 66 TPKVDIRAVVFQN-------------EKLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKLLAIFDK 132 (205)
T ss_dssp CCEEEEEEEEEET-------------TEEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEH
T ss_pred CCcceEEEEEEEC-------------CEEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceEEEEEec
Confidence 3467788888852 18999999878899999999999999999999999999999875443100
Q ss_pred -------------------------ccCCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHhcccCC
Q 030947 113 -------------------------EWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQQLH 156 (168)
Q Consensus 113 -------------------------~~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~~~ 156 (168)
.-+..|..++.|+++++++++...+.+.+.+..+++.+....+.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~l~~~~~~~~~i~~~~~~~~~~~~~ 201 (205)
T 3q1p_A 133 EKHQPSPSATHVYKIFIGCEIIGGEKKTSIETEEVEFFGENELPNLSIARNTEDQIKEMFAYMKDPQKE 201 (205)
T ss_dssp HHHSCCCCSSCEEEEEEEEEEEEECCCCCTTSCCEEEECTTSCCCBCTTTCCHHHHHHHHHHHHCTTSC
T ss_pred cccCCCCCCceEEEEEEEEEecCCccCCCCcceEEEEEeHHHhhhcCCCccHHHHHHHHHHHHhCCCCC
Confidence 00224677899999999999988888899999988888776544
No 13
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.75 E-value=6.1e-18 Score=126.87 Aligned_cols=95 Identities=23% Similarity=0.224 Sum_probs=72.3
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceecccc-----
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQLA----- 112 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~~----- 112 (168)
.+..+++++++. .+|||+++++.+.|.||||+++.|||+.+||+||++||||+++.....+.
T Consensus 5 ~~~~v~~vi~~~-------------~~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~ 71 (159)
T 3f6a_A 5 RHFTVSVFIVCK-------------DKVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKK 71 (159)
T ss_dssp SCEEEEEEEEET-------------TEEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHH
T ss_pred ceEEEEEEEEEC-------------CEEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCCCceecccccccccc
Confidence 456788888863 18999999988999999999999999999999999999999875433110
Q ss_pred ------------------------------cc-----------CCCceeeEEEEeHhHHHhhc-CChhHHHHHHH
Q 030947 113 ------------------------------EW-----------PEKNVRSRKWMSVAEARKVC-QHWWMKEALDR 145 (168)
Q Consensus 113 ------------------------------~~-----------~e~e~~~~~W~~~~e~~~~~-~~~~~~~~l~~ 145 (168)
.| ...|..+++|++++++.++. ..+++..+.+.
T Consensus 72 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~ 146 (159)
T 3f6a_A 72 SCDLSGEKLLINPIHTILGDVSPNHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNAHNIQENILVMATE 146 (159)
T ss_dssp HHHHTTCEEECCCSEEEEECSSSSSCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTTCSSSCHHHHHHHHH
T ss_pred cccccccccccCccccccccCCCCceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhhCcCCChhHHHHHHH
Confidence 01 12366789999999999987 44444444433
No 14
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.75 E-value=1.1e-17 Score=142.00 Aligned_cols=115 Identities=29% Similarity=0.397 Sum_probs=89.9
Q ss_pred eEEEEEEEEeeccc----cc-------cccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCcccee
Q 030947 40 QVVGCIPYRYKCVK----QS-------LDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVE 108 (168)
Q Consensus 40 ~~~g~v~~~~~~~~----~g-------~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~ 108 (168)
..+|+|+|+..... .| .++++++.+|||+++...+.|.||||+++.|||+.+||+||++||||+++...
T Consensus 4 ~aag~i~~r~~~~~~i~~~~~i~~~~~~~i~~~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~ 83 (364)
T 3fjy_A 4 EAAGGIVWRWKAGSDIANDPAIASSKSAQEQLDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLG 83 (364)
T ss_dssp CEEEEEEEEECTTSHHHHCGGGGGGSCHHHHHTTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEE
T ss_pred cccCcEEEEeeccccccCCccccccccccccCCceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeec
Confidence 47899999975110 00 12334678999999988899999999999999999999999999999986433
Q ss_pred ccc---------------------------ccc-----------------------CCCceeeEEEEeHhHHHhhcCChh
Q 030947 109 DQL---------------------------AEW-----------------------PEKNVRSRKWMSVAEARKVCQHWW 138 (168)
Q Consensus 109 ~~~---------------------------~~~-----------------------~e~e~~~~~W~~~~e~~~~~~~~~ 138 (168)
..+ ..| ++.|..+++||+++++.+++.++.
T Consensus 84 ~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~ 163 (364)
T 3fjy_A 84 PYLCEVEYPLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSHST 163 (364)
T ss_dssp EEEEEEC---------------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCSCHH
T ss_pred cccceEEEeccCCCcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhcchh
Confidence 300 000 114677899999999999999999
Q ss_pred HHHHHHHHHHHHhccc
Q 030947 139 MKEALDRLVMRLTSQQ 154 (168)
Q Consensus 139 ~~~~l~~~~~~~~~~~ 154 (168)
.+.++..+.+++..+.
T Consensus 164 ~r~il~~~~~~l~~g~ 179 (364)
T 3fjy_A 164 DKDTLAVFVDRVQEGA 179 (364)
T ss_dssp HHHHHHHHHHHHHTTG
T ss_pred hHHHHHHHHHHhccCC
Confidence 9999999999887654
No 15
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.74 E-value=1.6e-17 Score=121.98 Aligned_cols=86 Identities=24% Similarity=0.245 Sum_probs=66.8
Q ss_pred EEEEEEEeC------CCceeccceeccCCCCHHHHHHHHHHHHHcCccceecccc-----------------------cc
Q 030947 64 EVLVISSQK------GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQLA-----------------------EW 114 (168)
Q Consensus 64 ~vLLv~r~~------~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~~-----------------------~~ 114 (168)
+|||++|.. .|.|.||||+++.||++.+||.||++||||+.+.....+. ..
T Consensus 18 ~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 97 (140)
T 3gwy_A 18 KYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLLTVHHTYPDFEITMHAFLCHPVGQRY 97 (140)
T ss_dssp EEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCSSCCEEEEEEEEEECCSCC
T ss_pred EEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceEEEEEEEEeCCceEEEEEEEEEecCCcc
Confidence 799999874 3679999999999999999999999999999876544110 01
Q ss_pred CCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHH
Q 030947 115 PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMR 149 (168)
Q Consensus 115 ~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~ 149 (168)
...+..+++|++++++.++...+..+.+++.+.+.
T Consensus 98 ~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~ 132 (140)
T 3gwy_A 98 VLKEHIAAQWLSTREMAILDWAEADKPIVRKISEQ 132 (140)
T ss_dssp CCCSSCEEEEECHHHHTTSCBCGGGHHHHHHHHC-
T ss_pred cccccceeEeccHHHHhhCCCCcccHHHHHHHHhC
Confidence 12356789999999999998888888888776544
No 16
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.74 E-value=1.3e-17 Score=122.47 Aligned_cols=99 Identities=19% Similarity=0.286 Sum_probs=76.4
Q ss_pred eEEEEEEEEeeccccccccccCceEEEEEEEeC-CCceeccceeccCCCCHHHHHHHHHHHHHcCccceec--c------
Q 030947 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVED--Q------ 110 (168)
Q Consensus 40 ~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~--~------ 110 (168)
..+++++++. +++++||+++.. .|.|.||||+++.||++.+||.||++||||+.+.... .
T Consensus 10 ~~v~~~i~~~-----------~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~ 78 (150)
T 2o1c_A 10 VSILVVIYAQ-----------DTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRT 78 (150)
T ss_dssp EEEEEEEEET-----------TTCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEE
T ss_pred eEEEEEEEeC-----------CCCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeece
Confidence 5677888763 224899999876 6899999999999999999999999999999864310 0
Q ss_pred ---------------------cccc----------CCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHH
Q 030947 111 ---------------------LAEW----------PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMR 149 (168)
Q Consensus 111 ---------------------~~~~----------~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~ 149 (168)
...| ...+..+++|++++++.++...+..+.++..+.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 148 (150)
T 2o1c_A 79 VEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN 148 (150)
T ss_dssp EEEECCGGGGGGBCTTCCEEEEEEEEEEESSCCCCCCSSSSCEEEEEHHHHHHHCSCHHHHHHHHHHTTC
T ss_pred eeeeeecccccccCCCCcceEEEEEEEEcCCCCCcChhHhhccEeecHHHHHhhhcCHHHHHHHHHHHHh
Confidence 0000 11366789999999999998888888888776543
No 17
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.73 E-value=2.7e-17 Score=120.90 Aligned_cols=98 Identities=20% Similarity=0.286 Sum_probs=74.9
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc------
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL------ 111 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~------ 111 (168)
.+..+++++++. ++.+|||+++ ..+.|.||||+++.||++.+||.||++||||+.+.....+
T Consensus 17 ~~~~~~~vi~~~-----------~~~~vLl~~r-~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~ 84 (148)
T 2azw_A 17 TRYAAYIIVSKP-----------ENNTMVLVQA-PNGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGEADEY 84 (148)
T ss_dssp ECCEEEEECEEG-----------GGTEEEEEEC-TTSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEE
T ss_pred eeeEEEEEEECC-----------CCCeEEEEEc-CCCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeEEEEEEEE
Confidence 345677777764 2348999997 4589999999999999999999999999999986433310
Q ss_pred --------------ccc----------CCCceeeEEEEeHhHHHhhcCChhHHHHHHHHH
Q 030947 112 --------------AEW----------PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLV 147 (168)
Q Consensus 112 --------------~~~----------~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~ 147 (168)
..| +..+..++.|++++++.+++..+.++.++.++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 144 (148)
T 2azw_A 85 FYSNHRQTAYYNPGYFYVANTWRQLSEPLERTNTLHWVAPEEAVRLLKRGSHRWAVEKWL 144 (148)
T ss_dssp EEETTTTEEEEEEEEEEEEEEEEECSSCC-CCSEEEEECHHHHHHHBSCHHHHHHHHHHH
T ss_pred EcCCCCCcceEEEEEEEEEEcCcCCcCCCCceeeEEEeeHHHHHhhhcchhHHHHHHHHH
Confidence 000 122456899999999999998888888887765
No 18
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.73 E-value=8.7e-18 Score=131.62 Aligned_cols=114 Identities=30% Similarity=0.516 Sum_probs=72.7
Q ss_pred ccCccchhhhhhhccccccccccC-CceeEEEEEEEEeeccccccccccCceEEEEEEEeC-CCceeccceeccCCCCHH
Q 030947 13 LVTPENVVGNLVSRTGRHLQRYQK-GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQ 90 (168)
Q Consensus 13 ~~~~~~~~~~~~~~~g~~~~r~~~-~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~ 90 (168)
+-++..|...++.........|.. .++..+++|+++.+ ++.+|||+++.+ ++.|.||||+++.|||+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~----------~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~ 82 (194)
T 2fvv_A 13 LGTENLYFQSMMKLKSNQTRTYDGDGYKKRAACLCFRSE----------SEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 82 (194)
T ss_dssp -----------------CCCCBCTTSCEEEEEEEEESST----------TCCEEEEEECSSCTTSEECSEEECCTTCCHH
T ss_pred CCCccHHHHHHHHhccCCccccccCCccccEEEEEEEEC----------CCCEEEEEEEeCCCCcEECCCCcCCCCcCHH
Confidence 344445555555554444445555 67888899888643 345899999865 589999999999999999
Q ss_pred HHHHHHHHHHHcCccceecccc-----------------------ccCCC--ceeeEEEEeHhHHHhhcCC
Q 030947 91 EAALRETIEEAGVTGIVEDQLA-----------------------EWPEK--NVRSRKWMSVAEARKVCQH 136 (168)
Q Consensus 91 ~aA~REl~EEtGi~~~~~~~~~-----------------------~~~e~--e~~~~~W~~~~e~~~~~~~ 136 (168)
+||+||++||||+++.....+. .++.. +..+++||+++++.+++..
T Consensus 83 eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~~ 153 (194)
T 2fvv_A 83 VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQY 153 (194)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEEEEETTTTEEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCccccceEEEEEEcCCCceEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHhc
Confidence 9999999999999876444110 00110 2357899999999987653
No 19
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.73 E-value=1.6e-17 Score=124.88 Aligned_cols=96 Identities=19% Similarity=0.189 Sum_probs=72.8
Q ss_pred CceeEEEEEEEEeeccccccccccCceEEEEEEEe---CCCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc--
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQ---KGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL-- 111 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~---~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~-- 111 (168)
..+..+++++++. .+|||+++. ..+.|.||||+++.||++.+||.||++||||+.+.....+
T Consensus 27 ~~~~~v~~vi~~~-------------~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~ 93 (157)
T 4dyw_A 27 QPRVGCGAAIVRD-------------GRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERATLLCV 93 (157)
T ss_dssp CCEEEEEEEEEET-------------TEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEEEEE
T ss_pred CceeEEEEEEEEC-------------CEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCcEEEE
Confidence 3567788888862 189999998 3588999999999999999999999999999986544310
Q ss_pred --------------c------------ccCCCceeeEEEEeHhHHHhhcCChhHHHHHHHH
Q 030947 112 --------------A------------EWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRL 146 (168)
Q Consensus 112 --------------~------------~~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~ 146 (168)
. ..+..+..+++|++++++.+ ...+..+.++..+
T Consensus 94 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~-~l~~~~~~~l~~l 153 (157)
T 4dyw_A 94 VDHIDAANGEHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQ-PLTHATRIALEQV 153 (157)
T ss_dssp EEEEETTTTEEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCCS-SBCHHHHHHHHHH
T ss_pred EEeeccCCCcEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHccc-ccCHHHHHHHHHH
Confidence 0 00123677899999999998 4456666666554
No 20
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.73 E-value=2e-17 Score=133.69 Aligned_cols=108 Identities=21% Similarity=0.290 Sum_probs=80.3
Q ss_pred CceeEEEEEEEEeeccccccccccCceEEEEEEEeC---CCceeccceeccC--CCCHHHHHHHHHHHHHcCccceeccc
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEI--DESIQEAALRETIEEAGVTGIVEDQL 111 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~---~~~W~lPgG~ve~--gEt~~~aA~REl~EEtGi~~~~~~~~ 111 (168)
...+.+++|++... + ++.+|||++|.. .|.|.||||+++. |||+.+||.||++||||+++...+++
T Consensus 20 ~p~v~v~~vi~~~~---~------~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~l 90 (240)
T 3gz5_A 20 AQLLTVDAVLFTYH---D------QQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQL 90 (240)
T ss_dssp -CEEEEEEEEEEEE---T------TEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEEE
T ss_pred CCccEEEEEEEEEe---C------CCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceeeE
Confidence 35688999998765 2 557999999875 4789999999999 99999999999999999987655522
Q ss_pred ccc---------------------------CCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHhcc
Q 030947 112 AEW---------------------------PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQ 153 (168)
Q Consensus 112 ~~~---------------------------~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~~~ 153 (168)
..+ ...+..++.|+++++++......+...++..+.+++..+
T Consensus 91 ~~~~~~~r~~~~~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~~rlr~k 159 (240)
T 3gz5_A 91 CTVGNNSRDARGWSVTVCYTALMSYQACQIQIASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQK 159 (240)
T ss_dssp EEEEESSSSTTSCEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHHHHHHHH
T ss_pred EEeCCCccCCCceEEEEEEEEEecccccCCCCCcccceEEecHHHcccCCcchhHHHHHHHHHHHHHHh
Confidence 110 122556899999999986544444566666666665543
No 21
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.73 E-value=5.4e-17 Score=126.72 Aligned_cols=95 Identities=20% Similarity=0.301 Sum_probs=71.7
Q ss_pred CceeEEEEEEEEeeccccccccccCceEEEEEEEeC--CCceeccceeccCCCCHHHHHHHHHHHHHcCccceecccc--
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK--GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQLA-- 112 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~--~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~~-- 112 (168)
..+..+++++++.+ +.+|||++++. .+.|.||||+++.||++.+||+||++||||+.+.....+.
T Consensus 24 ~~~v~v~~~v~~~~-----------~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~l~~~~ 92 (199)
T 3h95_A 24 SHQVGVAGAVFDES-----------TRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIR 92 (199)
T ss_dssp --CCEEEEEEEETT-----------TTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_pred cccceEEEEEEeCC-----------CCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccceEEEEE
Confidence 34567778888642 34899999886 5899999999999999999999999999999875443110
Q ss_pred ---------------------------ccCCCceeeEEEEeHhHHHhhcCChhHHHH
Q 030947 113 ---------------------------EWPEKNVRSRKWMSVAEARKVCQHWWMKEA 142 (168)
Q Consensus 113 ---------------------------~~~e~e~~~~~W~~~~e~~~~~~~~~~~~~ 142 (168)
...+.|..++.|++++++.++.....+...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~ 149 (199)
T 3h95_A 93 QQHTNPGAFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSR 149 (199)
T ss_dssp ECC---------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCSSBCHHHHH
T ss_pred eeecCCCCceeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhhhhcChHHHH
Confidence 002347788999999999998765555433
No 22
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.72 E-value=1.6e-17 Score=130.78 Aligned_cols=105 Identities=14% Similarity=0.178 Sum_probs=84.3
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc------
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL------ 111 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~------ 111 (168)
.+..+++++++. .+|||+++. .+.|.||||+++.|||+.+||.||++||||+.+.....+
T Consensus 69 ~~~~v~~vv~~~-------------~~vLLvrr~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~ 134 (206)
T 3o8s_A 69 PKLDTRAAIFQE-------------DKILLVQEN-DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILDKH 134 (206)
T ss_dssp CEEEEEEEEEET-------------TEEEEEECT-TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEEEHH
T ss_pred CCccEEEEEEEC-------------CEEEEEEec-CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeEEEEEecc
Confidence 456777788763 289999988 789999999999999999999999999999986544310
Q ss_pred -------------c----------ccCCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHhcccCC
Q 030947 112 -------------A----------EWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQQLH 156 (168)
Q Consensus 112 -------------~----------~~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~~~ 156 (168)
. .-+..|..+++|+++++++++...+.+.+.+..+++.+....+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~l~~~~~~~~~l~~~~~~~~~~~~~ 202 (206)
T 3o8s_A 135 KNNPAKSAHRVTKVFILCRLLGGEFQPNSETVASGFFSLDDLPPLYLGKNTAEQLALCLEASRSEHWE 202 (206)
T ss_dssp HHCC-----CEEEEEEEEEEEEECCCCCSSCSEEEEECTTSCCCBCTTTCCHHHHHHHHHHHHCSSCC
T ss_pred ccCCCCCCceEEEEEEEEEecCCeecCCCCceEEEEEeHHHhhhccCCCchHHHHHHHHHHHHCCCCC
Confidence 0 00224677899999999999988888999999998887776544
No 23
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.72 E-value=1.5e-17 Score=125.98 Aligned_cols=98 Identities=17% Similarity=0.177 Sum_probs=75.4
Q ss_pred CceeEEEEEEEEeeccccccccccCceEEEEEEEeC-CCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc----
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL---- 111 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~---- 111 (168)
.++..+++|+++. .+|||+++.. .+.|.||||+++.||++.+||+||++||||+++.....+
T Consensus 21 ~~~~~v~~ii~~~-------------~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~ 87 (171)
T 3id9_A 21 IMQVRVTGILIED-------------EKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKKLLYVCD 87 (171)
T ss_dssp -CEEEEEEEEEET-------------TEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEE
T ss_pred ceEEEEEEEEEEC-------------CEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccceEEEEEc
Confidence 4566777777753 2899999886 689999999999999999999999999999987544410
Q ss_pred ---------------cc-----------cCCCceeeEEEEeHhHHHhhcCChhHHHHHHHHH
Q 030947 112 ---------------AE-----------WPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLV 147 (168)
Q Consensus 112 ---------------~~-----------~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~ 147 (168)
.. .+..|..+++|++++++.++...+.++.++.+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~~~~~l~~~~ 149 (171)
T 3id9_A 88 KPDASPSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYGFSETFINLISGGL 149 (171)
T ss_dssp ETTSSSCEEEEEEEEEEC-------------CCCCCEEEEETGGGGGGTCCTTCSHHHHHGG
T ss_pred ccCCCCcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCCCCHHHHHHHHHhh
Confidence 00 0123567899999999999887777777776653
No 24
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.72 E-value=2.9e-17 Score=122.84 Aligned_cols=87 Identities=23% Similarity=0.205 Sum_probs=69.2
Q ss_pred eEEEEEEEeCC----CceeccceeccCCCCHHHHHHHHHHHHHcCccceecc--c-------------------c----c
Q 030947 63 LEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQ--L-------------------A----E 113 (168)
Q Consensus 63 ~~vLLv~r~~~----~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~--~-------------------~----~ 113 (168)
.+|||++|... |.|.||||+++.||++.+||.||++||||+.+..... + . .
T Consensus 41 ~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (158)
T 3hhj_A 41 NRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGYETFHLLMPLYFCSHYKGV 120 (158)
T ss_dssp SEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSCEEEEEEEEESCCBSC
T ss_pred CEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeeccCCcEEEEEEEEEEECCCc
Confidence 48999998753 6899999999999999999999999999998654320 0 0 0
Q ss_pred cCCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHH
Q 030947 114 WPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMR 149 (168)
Q Consensus 114 ~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~ 149 (168)
....+..++.|++++++.++...+.++.+++.+.++
T Consensus 121 ~~~~e~~~~~W~~~~el~~~~~~~~~~~il~~~~~~ 156 (158)
T 3hhj_A 121 AQGREGQNLKWIFINDLDKYPMPEADKPLVQVLKNF 156 (158)
T ss_dssp CCCTTSCEEEEEEGGGGGGSCCCTTTHHHHHHHHHC
T ss_pred cCCccccceEEEcHHHHhhCCCCcchHHHHHHHHHh
Confidence 112366789999999999988888888888777654
No 25
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.72 E-value=8e-17 Score=117.89 Aligned_cols=100 Identities=18% Similarity=0.176 Sum_probs=72.4
Q ss_pred CceeEEEEEEEEeeccccccccccCceE--EEEEEEeCC-CceeccceeccCCCCHHHHHHHHHHHHHcCccceecccc-
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLE--VLVISSQKG-KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQLA- 112 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~--vLLv~r~~~-~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~~- 112 (168)
..+..+++++++.+ .+.+ |||+++... +.|.||||+++.|||+.+||.||++||||+.+.....+.
T Consensus 7 ~p~~~v~~vi~~~~----------~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~ 76 (139)
T 2yyh_A 7 TPLLATDVIIRLWD----------GENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLHKLMGV 76 (139)
T ss_dssp CCEEEEEEEEEEEE----------TTEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_pred CCeEEEEEEEEEEc----------CCCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccceEEEE
Confidence 35678899998854 3346 999998753 569999999999999999999999999999875443110
Q ss_pred ---------------c---------cCCCceeeEEEEeHhHHH-hhcCChhHHHHHHHHH
Q 030947 113 ---------------E---------WPEKNVRSRKWMSVAEAR-KVCQHWWMKEALDRLV 147 (168)
Q Consensus 113 ---------------~---------~~e~e~~~~~W~~~~e~~-~~~~~~~~~~~l~~~~ 147 (168)
. .+..+..+++|++++++. +.+..+ ...++..+.
T Consensus 77 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~e~~~~~W~~~~el~~~~l~~~-~~~~l~~~l 135 (139)
T 2yyh_A 77 YSDPERDPRAHVVSVVWIGDAQGEPKAGSDAKKVKVYRLEEIPLDKLVFD-HKKIILDFL 135 (139)
T ss_dssp ECCTTSCTTSCEEEEEEEEEEESCCCCCTTEEEEEEECTTSCCGGGBCTT-HHHHHHHHH
T ss_pred ECCCCcCCCceEEEEEEEEecCCccCCCCCcceEEEEEHHHCCHhhcCCC-HHHHHHHHH
Confidence 0 022366789999999999 334433 344554443
No 26
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.72 E-value=7.8e-17 Score=124.87 Aligned_cols=106 Identities=22% Similarity=0.251 Sum_probs=81.5
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeC---CCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc---
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL--- 111 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~--- 111 (168)
.+..+++|+++. .+|||+++.. .+.|.||||+++.|||+.+||+||++||||+.+.....+
T Consensus 39 ~~~~v~~ii~~~-------------~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~ 105 (189)
T 3cng_A 39 PKVIVGCIPEWE-------------NKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIRELYAVY 105 (189)
T ss_dssp CEEEEEEEEEET-------------TEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_pred CceEEEEEEEeC-------------CEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccceeEEEE
Confidence 456777777762 1899999975 578999999999999999999999999999987544310
Q ss_pred ---------c----------ccCCCceeeEEEEeHhHHH-hhcCChhHHHHHHHHHHHHhcccCC
Q 030947 112 ---------A----------EWPEKNVRSRKWMSVAEAR-KVCQHWWMKEALDRLVMRLTSQQLH 156 (168)
Q Consensus 112 ---------~----------~~~e~e~~~~~W~~~~e~~-~~~~~~~~~~~l~~~~~~~~~~~~~ 156 (168)
. ..+..|..++.|++++++. ..+.++.....+..+++....+.+.
T Consensus 106 ~~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~~~~~~l~~~l~~~~~~~~~ 170 (189)
T 3cng_A 106 SLPHISQVYMLFRAKLLDLDFFPGIESLEVRLFGEQEIPWNDIAFRVIHDPLKRYMEERHHGQPA 170 (189)
T ss_dssp EEGGGTEEEEEEEEEECCSCCCCCTTEEEEEEECTTTCCGGGBSCHHHHHHHHHHHHHHHHSSCC
T ss_pred ecCCCcEEEEEEEEEeCCCccCCCccceeEEEECHHHcCcccccChHHHHHHHHHHHhccCCCcc
Confidence 0 0124467789999999998 4567888888888887776655444
No 27
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.8e-17 Score=122.17 Aligned_cols=87 Identities=18% Similarity=0.233 Sum_probs=66.4
Q ss_pred EEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceec-----------
Q 030947 41 VVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVED----------- 109 (168)
Q Consensus 41 ~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~----------- 109 (168)
.+++++++. ++.+|||+++...+.|.||||+++.|||+.+||.||++||||+.+....
T Consensus 6 ~~~~~i~~~-----------~~~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~ 74 (146)
T 2jvb_A 6 VRGAAIFNE-----------NLSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYIDDNQFIERNIQ 74 (146)
T ss_dssp CEEEEEBCT-----------TSSEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSCSSCEEEEEET
T ss_pred EEEEEEEeC-----------CCCEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhcccccccccccC
Confidence 456667653 2358999998888999999999999999999999999999999865321
Q ss_pred ------cccc----------cCCCceeeEEEEeHhHHHhhcCChh
Q 030947 110 ------QLAE----------WPEKNVRSRKWMSVAEARKVCQHWW 138 (168)
Q Consensus 110 ------~~~~----------~~e~e~~~~~W~~~~e~~~~~~~~~ 138 (168)
.+.. .++.+..++.|++++++.+++....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~ 119 (146)
T 2jvb_A 75 GKNYKIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYKSN 119 (146)
T ss_dssp TEEEEEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGCSS
T ss_pred CceEEEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhcccc
Confidence 0000 0133667899999999999875543
No 28
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.70 E-value=1.3e-16 Score=117.89 Aligned_cols=82 Identities=22% Similarity=0.280 Sum_probs=61.8
Q ss_pred EEEEEEEeCC---CceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc------------------------c----
Q 030947 64 EVLVISSQKG---KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL------------------------A---- 112 (168)
Q Consensus 64 ~vLLv~r~~~---~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~------------------------~---- 112 (168)
+|||+++.+. +.|.||||+++.||++.+||+||++||||+++.....+ .
T Consensus 20 ~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 99 (153)
T 2b0v_A 20 KYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYHWTCASNGTTYLRFTFSGQVVSFDPD 99 (153)
T ss_dssp EEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEECTT
T ss_pred EEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceEEEEEEEeCCCCCcEEEEEEEEEEeCCCCCC
Confidence 8999998764 48999999999999999999999999999986543300 0
Q ss_pred ccCCCceeeEEEEeHhHHHhh---cCChhHHHHHHH
Q 030947 113 EWPEKNVRSRKWMSVAEARKV---CQHWWMKEALDR 145 (168)
Q Consensus 113 ~~~e~e~~~~~W~~~~e~~~~---~~~~~~~~~l~~ 145 (168)
...+.+..++.|++++++.++ ...+.++.++..
T Consensus 100 ~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~~~l~~ 135 (153)
T 2b0v_A 100 RKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIED 135 (153)
T ss_dssp SCCCTTEEEEEEEEHHHHHHTGGGBSSTHHHHHHHH
T ss_pred CCCCCCeeeEEEecHHHHhhhhcccCcHHHHHHHHH
Confidence 012336678999999999995 344545555443
No 29
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.70 E-value=3.9e-17 Score=119.64 Aligned_cols=89 Identities=21% Similarity=0.163 Sum_probs=69.8
Q ss_pred eEEEEEEEeCC----CceeccceeccCCCCHHHHHHHHHHHHHcCccceecc----------------cc---------c
Q 030947 63 LEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQ----------------LA---------E 113 (168)
Q Consensus 63 ~~vLLv~r~~~----~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~----------------~~---------~ 113 (168)
.+|||++|... |.|.||||+++.||++.+||.||++||||+.+..... .. .
T Consensus 20 ~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (144)
T 3r03_A 20 GRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSYDTFHLLMPLYACRSWRGR 99 (144)
T ss_dssp SCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSSEEEEEEEEECCCBSC
T ss_pred CEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccCCCeEEEEEEEEEEecCCc
Confidence 37999998753 7899999999999999999999999999998754420 00 0
Q ss_pred cCCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHh
Q 030947 114 WPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLT 151 (168)
Q Consensus 114 ~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~ 151 (168)
....+..+++|++++++.++...+.++.+++.+.+...
T Consensus 100 ~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~ 137 (144)
T 3r03_A 100 ATAREGQTLAWVRAERLREYPMPPADLPLIPILQDWLE 137 (144)
T ss_dssp CCCCSSCEEEEECGGGGGGSCCCTTTTTHHHHHHHHC-
T ss_pred cCCCCcceEEEEeHHHhccCCCCcchHHHHHHHhCccc
Confidence 12235678999999999999888888888877766544
No 30
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.70 E-value=9.1e-17 Score=118.44 Aligned_cols=88 Identities=24% Similarity=0.231 Sum_probs=71.1
Q ss_pred EEEEEEEeCC----CceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc-----------------------cccCC
Q 030947 64 EVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL-----------------------AEWPE 116 (168)
Q Consensus 64 ~vLLv~r~~~----~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~-----------------------~~~~e 116 (168)
+|||++|... |.|.||||+++.||++.+||.||++||||+.+.....+ .....
T Consensus 34 ~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (153)
T 3ees_A 34 KILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKLACTHSYGDVGILILFYEILYWKGEPRA 113 (153)
T ss_dssp EEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCEEEEEEEEETTEEEEEEEEEECEEESCCCC
T ss_pred EEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCceEEEEEEecCCCeEEEEEEEEEECCCCcCC
Confidence 8999998764 78999999999999999999999999999986544310 01123
Q ss_pred CceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHh
Q 030947 117 KNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLT 151 (168)
Q Consensus 117 ~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~ 151 (168)
.+..++.|++++++.++...+.++.++..+.+.+.
T Consensus 114 ~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~ 148 (153)
T 3ees_A 114 KHHMMLEWIHPEELKHRNIPEANRKILHKIYKALG 148 (153)
T ss_dssp SSSSEEEEECGGGGGGSCCCHHHHTTHHHHHHHTT
T ss_pred CccceEEEecHHHhhhCCCCcchHHHHHHHHHhhc
Confidence 35678999999999998888888888888776654
No 31
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.70 E-value=1.2e-16 Score=118.54 Aligned_cols=84 Identities=23% Similarity=0.309 Sum_probs=61.7
Q ss_pred EEEEEEEeC--CCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc---------------------------ccc
Q 030947 64 EVLVISSQK--GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL---------------------------AEW 114 (168)
Q Consensus 64 ~vLLv~r~~--~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~---------------------------~~~ 114 (168)
+|||+++.. .+.|.||||+++.|||+.+||.||++||||+++.....+ ...
T Consensus 17 ~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 96 (153)
T 3shd_A 17 KFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQP 96 (153)
T ss_dssp EEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCTTSCCEEEEEEEEECSSCCCCCC
T ss_pred EEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcEEEEEEEecCCCceEEEEEEEEEccccCcCCC
Confidence 899999863 467999999999999999999999999999987544300 001
Q ss_pred CCCceeeEEEEeHhHHHhh--cCChhHHHHHHHHH
Q 030947 115 PEKNVRSRKWMSVAEARKV--CQHWWMKEALDRLV 147 (168)
Q Consensus 115 ~e~e~~~~~W~~~~e~~~~--~~~~~~~~~l~~~~ 147 (168)
.+.|..++.|++++++... ...+.....+..+.
T Consensus 97 ~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~~ 131 (153)
T 3shd_A 97 HDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQ 131 (153)
T ss_dssp CSTTCCEEEEECHHHHHTCSCBSSTHHHHHHHHHH
T ss_pred CcccceeeEEecHHHhhccccccCchHHHHHHHHH
Confidence 2336778999999999332 24455555555443
No 32
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.70 E-value=1.7e-16 Score=118.31 Aligned_cols=102 Identities=21% Similarity=0.298 Sum_probs=74.5
Q ss_pred CceeEEEEEEEEeeccccccccccCceEEEEEEEeC-CCceeccceeccCCCCHHHHHHHHHHHHHcCccceec-c----
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVED-Q---- 110 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~-~---- 110 (168)
.++..+++++++. +.+|||++|.. ++.|.+|||+++.|||+.+||+||++||||+.+.... .
T Consensus 12 ~~~~~v~~~i~~~------------~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~ 79 (165)
T 1f3y_A 12 GYRRNVGICLMNN------------DKKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYW 79 (165)
T ss_dssp SCCCEEEEEEECT------------TSCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSC
T ss_pred ceeeeEEEEEECC------------CCcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccc
Confidence 5788889988863 23799999875 4799999999999999999999999999999853110 0
Q ss_pred ------------------------c-ccc------------------CCCceeeEEEEeHhHHHhhcCChhHHHHHHHHH
Q 030947 111 ------------------------L-AEW------------------PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLV 147 (168)
Q Consensus 111 ------------------------~-~~~------------------~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~ 147 (168)
. ..| +..+..+++|++++++.+++... ....++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~-~~~~~~~~~ 158 (165)
T 1f3y_A 80 LTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVEF-KKPVYKEVL 158 (165)
T ss_dssp CBCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCGG-GHHHHHHHH
T ss_pred eeeecCccccccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhhh-hHHHHHHHH
Confidence 0 000 13367789999999999987432 344555555
Q ss_pred HHHh
Q 030947 148 MRLT 151 (168)
Q Consensus 148 ~~~~ 151 (168)
..+.
T Consensus 159 ~~l~ 162 (165)
T 1f3y_A 159 SVFA 162 (165)
T ss_dssp HHHG
T ss_pred HHhh
Confidence 5443
No 33
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.69 E-value=6.7e-17 Score=125.52 Aligned_cols=85 Identities=21% Similarity=0.216 Sum_probs=67.8
Q ss_pred EEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceecc------------------c-ccc----------
Q 030947 64 EVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQ------------------L-AEW---------- 114 (168)
Q Consensus 64 ~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~------------------~-~~~---------- 114 (168)
+|||+++...|.|.||||+++.||++.+||.||++||||+.+..... . ..|
T Consensus 16 ~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~a~~~~~~~~ 95 (188)
T 3fk9_A 16 QVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVSEWMLFTFKATEHEGEML 95 (188)
T ss_dssp EEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEEEEEEEEEEETTEEEEEEEEEEEEESCEESCCC
T ss_pred EEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEEEEEEEEecCCCcceEEEEEEEEEEECCCCCCc
Confidence 89999998889999999999999999999999999999998654330 0 000
Q ss_pred CCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHH
Q 030947 115 PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVM 148 (168)
Q Consensus 115 ~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~ 148 (168)
+..+...++|+++++++++...+..+..+..+.+
T Consensus 96 ~~~e~~~~~W~~~~el~~~~l~~~~~~~l~~~l~ 129 (188)
T 3fk9_A 96 KQSPEGKLEWKKKDEVLELPMAAGDKWIFKHVLH 129 (188)
T ss_dssp SEETTEEEEEEEGGGGGGSCCCHHHHHHHHHHTT
T ss_pred CCCCCEeEEEEEHHHhhhCCCCHHHHHHHHHHHc
Confidence 1224457999999999998888888777766544
No 34
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.69 E-value=2e-16 Score=119.07 Aligned_cols=82 Identities=22% Similarity=0.190 Sum_probs=64.7
Q ss_pred EEEEEEEeCC-----CceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc-------------------------cc
Q 030947 64 EVLVISSQKG-----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL-------------------------AE 113 (168)
Q Consensus 64 ~vLLv~r~~~-----~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~-------------------------~~ 113 (168)
+|||++|... +.|.||||+++.||++.+||.||++||||+.+.....+ ..
T Consensus 40 ~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (165)
T 3oga_A 40 CYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKTYADGRQEEIYMIYLI 119 (165)
T ss_dssp EEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEEEC--CCEEEEEEEEEE
T ss_pred EEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeEecCCCCceeEEEEEEE
Confidence 8999988742 78999999999999999999999999999986432200 00
Q ss_pred c----------CCCceeeEEEEeHhHHHhhcCChhHHHHHHH
Q 030947 114 W----------PEKNVRSRKWMSVAEARKVCQHWWMKEALDR 145 (168)
Q Consensus 114 ~----------~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~ 145 (168)
| +..|..+++|++++++.++...+..+.++..
T Consensus 120 ~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~ 161 (165)
T 3oga_A 120 FDCVSANRDICINDEFQDYAWVKPEELALYDLNVATRHTLAL 161 (165)
T ss_dssp EEEEESCCCCCCCTTEEEEEEECGGGGGGSCBCHHHHHHHHH
T ss_pred EEeeccCCCccCCchheeeEEccHHHHhhCCCCHHHHHHHHH
Confidence 0 1236778999999999998888888777754
No 35
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.68 E-value=4.7e-17 Score=130.30 Aligned_cols=104 Identities=16% Similarity=0.252 Sum_probs=75.6
Q ss_pred CceeEEEEEEEEeeccccccccccCceEEEEEEEeC---CCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccccc
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQLAE 113 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~~~ 113 (168)
..++.+++|++..+ + ++.+|||+++.. .|.|.||||+++.|||+.+||.||++||||+.+...+++..
T Consensus 11 ~p~v~v~~vi~~~~---~------~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~l~~ 81 (226)
T 2fb1_A 11 TFYLGIDCIIFGFN---E------GEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQVGA 81 (226)
T ss_dssp CEEEEEEEEEEEEE---T------TEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEEEEE
T ss_pred CCeEEEEEEEEEEe---C------CCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEEEEE
Confidence 45788999999764 2 456999999975 47899999999999999999999999999998765442110
Q ss_pred c--------------------C-------CCceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHHh
Q 030947 114 W--------------------P-------EKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLT 151 (168)
Q Consensus 114 ~--------------------~-------e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~~ 151 (168)
+ + ..+..++.|+++++++++.... ..++..+..++.
T Consensus 82 ~~~~~r~~~~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~l~~dh--~~il~~a~~rlr 144 (226)
T 2fb1_A 82 FGAIDRDPGERVVSIAYYALININEYDRELVQKHNAYWVNINELPALIFDH--PEMVDKAREMMK 144 (226)
T ss_dssp ECCTTSSSSSCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSCCCBSTTH--HHHHHHHHHHHH
T ss_pred eCCCCcCCCceEEEEEEEEEecCcccccCCccccceEEEEHHHhhhccCCH--HHHHHHHHHHHH
Confidence 0 1 1144579999999998865432 344444444443
No 36
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.68 E-value=3.5e-17 Score=123.40 Aligned_cols=100 Identities=21% Similarity=0.186 Sum_probs=75.1
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeCC---CceeccceeccCCCCHHHHHHHHHHHHHcCccceecccc--
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG---KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQLA-- 112 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~---~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~~-- 112 (168)
.+..+.+++++. +..+|||++|.+. |.|.||||+++.||++.+||.||++||||+.+.....+.
T Consensus 9 ~~~~v~~vi~~~-----------~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~ 77 (161)
T 3exq_A 9 VELVTMVMVTDP-----------ETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTC 77 (161)
T ss_dssp EEEEEEEEEBCT-----------TTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEEEEEE
T ss_pred ceEEEEEEEEeC-----------CCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcEEEEE
Confidence 455666666542 2358999998743 578899999999999999999999999999865444110
Q ss_pred -----------------------ccCCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHH
Q 030947 113 -----------------------EWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVM 148 (168)
Q Consensus 113 -----------------------~~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~ 148 (168)
.....+..+++|++++++.++...+.++.++..+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 136 (161)
T 3exq_A 78 EWFDDDRQHRKLGLLYRASNFTGTLKASAEGQLSWLPITALTRENSAASLPEFLQVFTG 136 (161)
T ss_dssp EEECSSCSSEEEEEEEEECCEESCCCGGGTTTEEEECGGGCCTTTBCTTHHHHHHHHTT
T ss_pred ecccCCCCeEEEEEEEEEeccCCccCCCccceEEEeeHHHhhhCccChHHHHHHHHHhh
Confidence 011224567999999999998888888888877665
No 37
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.68 E-value=2.9e-16 Score=114.28 Aligned_cols=87 Identities=22% Similarity=0.187 Sum_probs=68.8
Q ss_pred EEEEEEEeC----CCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc--------------cc---------cCC
Q 030947 64 EVLVISSQK----GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL--------------AE---------WPE 116 (168)
Q Consensus 64 ~vLLv~r~~----~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~--------------~~---------~~e 116 (168)
+|||+++.. .|.|.||||+++.||++.+||.||++||||+.+.....+ .. ...
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (140)
T 2rrk_A 21 KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQREVSGRIIHLHAWHVPDFHGTLQA 100 (140)
T ss_dssp EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEEEEEEEEEETTEEEEEEEEEESEEEECCCC
T ss_pred EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccEEEEEEEecCCcEEEEEEEEEEeeCCCcCC
Confidence 899999864 389999999999999999999999999999986533300 00 122
Q ss_pred CceeeEEEEeHhHHHhhcCChhHHHHHHHHHHHH
Q 030947 117 KNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRL 150 (168)
Q Consensus 117 ~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~ 150 (168)
.+..++.|++++++.++...+.++.++..+.+..
T Consensus 101 ~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~r 134 (140)
T 2rrk_A 101 HEHQALVWCSPEEALQYPLAPADIPLLEAFMALR 134 (140)
T ss_dssp SSCSCEEEECHHHHTTSCCCTTHHHHHHHHHHHH
T ss_pred CccceeEEeCHHHHhhCCCChhHHHHHHHHHHHh
Confidence 3456789999999999888888888888877653
No 38
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.68 E-value=1.5e-16 Score=122.09 Aligned_cols=86 Identities=17% Similarity=0.033 Sum_probs=67.0
Q ss_pred eEEEEEEEeC---CCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc----------------c---------cc
Q 030947 63 LEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL----------------A---------EW 114 (168)
Q Consensus 63 ~~vLLv~r~~---~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~----------------~---------~~ 114 (168)
.+|||+++.+ .+.|.||||+++.||++.+||.||++||||+.+.....+ . ..
T Consensus 36 ~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 115 (176)
T 3q93_A 36 QRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTP 115 (176)
T ss_dssp SEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEEEEEEEEETTCSCEEEEEEEEESCEESCC
T ss_pred CEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEEEEEEEEcCCCCcEEEEEEEEEECCCCCc
Confidence 3899998865 488999999999999999999999999999987544310 0 00
Q ss_pred CCCceeeEEEEeHhHHHhhcCChhHHHHHHHHHH
Q 030947 115 PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVM 148 (168)
Q Consensus 115 ~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~ 148 (168)
...+..+.+|+++++++.+...+..+..+..+.+
T Consensus 116 ~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 149 (176)
T 3q93_A 116 VESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQ 149 (176)
T ss_dssp CCCSSEEEEEEETTCCCGGGBCTTHHHHHHHHHT
T ss_pred CCCcceeeEEeeHHHccccccCcchHHHHHHHHc
Confidence 1225567899999999988877877777766544
No 39
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.67 E-value=4.7e-16 Score=115.75 Aligned_cols=96 Identities=16% Similarity=0.126 Sum_probs=71.0
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeC---CCceeccceeccCCCCHHHHHHHHHHHHHcCccc--eec---
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGI--VED--- 109 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~--~~~--- 109 (168)
.+..+++++++. +.+|||+++.+ .+.|.||||+++.||++.+||.||++||||+.+. ...
T Consensus 17 ~~~~v~~vi~~~------------~~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~ 84 (160)
T 1rya_A 17 PLVSLDFIVENS------------RGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYG 84 (160)
T ss_dssp CEEEEEEEEECT------------TSCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEE
T ss_pred cEEEEEEEEEcC------------CCEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEE
Confidence 456778888753 23799999986 5789999999999999999999999999999842 111
Q ss_pred ---c-cc----------c----------------cCCCceeeEEEEeHhHHHhhc-CChhHHHHHHH
Q 030947 110 ---Q-LA----------E----------------WPEKNVRSRKWMSVAEARKVC-QHWWMKEALDR 145 (168)
Q Consensus 110 ---~-~~----------~----------------~~e~e~~~~~W~~~~e~~~~~-~~~~~~~~l~~ 145 (168)
. .. . .+..+..+++|++++++.++. .++..++++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~ 151 (160)
T 1rya_A 85 VWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYFLA 151 (160)
T ss_dssp EEEEEESSBTTBSSSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHHCTTBCHHHHGGGCH
T ss_pred EEeEEEcccccCCCcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhhccccCHHHHHHHHH
Confidence 0 00 0 012367789999999999974 56666555543
No 40
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.67 E-value=7.4e-16 Score=117.42 Aligned_cols=104 Identities=22% Similarity=0.173 Sum_probs=73.3
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeC-----CCceec-cceeccCCCCHHHHHHHHHHHHHcCccceeccc
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGMLF-PKGGWEIDESIQEAALRETIEEAGVTGIVEDQL 111 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-----~~~W~l-PgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~ 111 (168)
.+..+++++++. +.+|||.+|.. +|.|.| |||+++.||++.+||.||++||||+.+.....+
T Consensus 36 ~~~~~~v~i~~~------------~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l 103 (180)
T 2fkb_A 36 RHRATYIVVHDG------------MGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEH 103 (180)
T ss_dssp CEEEEEEEEECS------------SSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEEE
T ss_pred eeeEEEEEEECC------------CCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEEE
Confidence 345566666643 23799988864 367999 999999999999999999999999975332200
Q ss_pred --------------cc----------cCCCceeeEEEEeHhHHHhhc--CChhHHHHHHHHHHHHhcc
Q 030947 112 --------------AE----------WPEKNVRSRKWMSVAEARKVC--QHWWMKEALDRLVMRLTSQ 153 (168)
Q Consensus 112 --------------~~----------~~e~e~~~~~W~~~~e~~~~~--~~~~~~~~l~~~~~~~~~~ 153 (168)
.. .+..+..++.|++++++.+++ ..+....++..+.......
T Consensus 104 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~~~~~~~~ 171 (180)
T 2fkb_A 104 GQFYFEDKNCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMKRNAKN 171 (180)
T ss_dssp EEEEEEETTEEEEEEEEEEECCCCCCCCTTTEEEEEEECHHHHHTTGGGBCHHHHHHHHHHHHHC---
T ss_pred EEEEecCCCceEEEEEEEEecCCCcCCChhHhheEEEecHHHHHHHHHHhCCcHHHHHHHHHHhhcCC
Confidence 00 123467789999999999984 3566777777766554443
No 41
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.67 E-value=5.3e-16 Score=117.78 Aligned_cols=58 Identities=29% Similarity=0.389 Sum_probs=51.0
Q ss_pred CceeEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccc
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGI 106 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~ 106 (168)
.++..+++++++.+ .+|||+++...+.|.+|||+++.|||+.+||.||++||||+.+.
T Consensus 6 ~~~~~v~~~i~~~~------------~~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~ 63 (164)
T 2kdv_A 6 GYRPNVGIVICNRQ------------GQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRK 63 (164)
T ss_dssp SEEEEEEEEEECTT------------SEEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGG
T ss_pred CCCcEEEEEEEccC------------CEEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCCCcc
Confidence 46778888888642 38999998888899999999999999999999999999999764
No 42
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.67 E-value=1.2e-15 Score=113.12 Aligned_cols=84 Identities=23% Similarity=0.207 Sum_probs=60.3
Q ss_pred eEEEEEEEEeeccccccccccCceEEEEEEEeCC----CceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc----
Q 030947 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL---- 111 (168)
Q Consensus 40 ~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~----~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~---- 111 (168)
..+++++++. +.+|||+++++. +.|.||||++++|||+.+||.||++||||+.+.....+
T Consensus 6 ~~v~vi~~~~------------~~~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~l~~~~ 73 (145)
T 2w4e_A 6 RAVFILPVTA------------QGEAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVPLPGFY 73 (145)
T ss_dssp EEEEEEEEET------------TSEEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEECCCBB
T ss_pred CEEEEEEEcC------------CCEEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEEEecCc
Confidence 3566777653 237888876532 37999999999999999999999999999986533300
Q ss_pred ---------------c-------ccCCCceeeEEEEeHhHHHhhcC
Q 030947 112 ---------------A-------EWPEKNVRSRKWMSVAEARKVCQ 135 (168)
Q Consensus 112 ---------------~-------~~~e~e~~~~~W~~~~e~~~~~~ 135 (168)
. ..++.|..++.|++++++.+++.
T Consensus 74 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 119 (145)
T 2w4e_A 74 PQPSISGVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYRMLE 119 (145)
T ss_dssp SCTTTCCCEEEEEEEEEEEEC--------CEEEEEEEHHHHHHHHH
T ss_pred CCCCccCceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHHHHH
Confidence 0 01223567899999999998764
No 43
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.66 E-value=3e-16 Score=119.58 Aligned_cols=86 Identities=22% Similarity=0.164 Sum_probs=63.2
Q ss_pred EEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccccc--------------c-----CCCceeeEEE
Q 030947 64 EVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQLAE--------------W-----PEKNVRSRKW 124 (168)
Q Consensus 64 ~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~~~--------------~-----~e~e~~~~~W 124 (168)
++||++++ .|.|.||||+++.|||+.+||.||++||||+.+.....+.. + +..|..+++|
T Consensus 28 ~vLL~~r~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~f~~~~~~~~~~~~E~~~~~W 106 (163)
T 3f13_A 28 GVLVTASR-GGRYNLPGGKANRGELRSQALIREIREETGLRINSMLYLFDHITPFNAHKVYLCIAQGQPKPQNEIERIAL 106 (163)
T ss_dssp EEEEEECC----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEEEEEEECSSEEEEEEEEEC-CCCCCCTTCCEEEE
T ss_pred EEEEEEEC-CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEEEEEEecCCeEEEEEEEEECCcCccCCCceEEEE
Confidence 79999876 58999999999999999999999999999999765552111 1 2226678999
Q ss_pred EeHhHHHhhcCChhHHHHHHHHHHHHh
Q 030947 125 MSVAEARKVCQHWWMKEALDRLVMRLT 151 (168)
Q Consensus 125 ~~~~e~~~~~~~~~~~~~l~~~~~~~~ 151 (168)
|+ .+.......+..+.++..+.....
T Consensus 107 ~~-~~~~~~~l~~~~~~il~~~~~~~~ 132 (163)
T 3f13_A 107 VS-SPDTDMDLFVEGRAILRRYARLRN 132 (163)
T ss_dssp ES-STTCSSCBCHHHHHHHHHHHHHTT
T ss_pred EC-cccccCCCCHHHHHHHHHHHHhhh
Confidence 99 445555566777788877766543
No 44
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.66 E-value=1.4e-16 Score=118.43 Aligned_cols=87 Identities=15% Similarity=0.188 Sum_probs=65.7
Q ss_pred CceeEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc-----
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL----- 111 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~----- 111 (168)
.++..+++++++. .+|||+++ .+.|.||||+++.||++.+||.||++||||+.+.....+
T Consensus 17 ~~~~~~~~ii~~~-------------~~vLl~~r--~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~ 81 (154)
T 2pqv_A 17 VFGVRATALIVQN-------------HKLLVTKD--KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQLAFVVEN 81 (154)
T ss_dssp EEEEEEEECCEET-------------TEEEEEEE--TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEE
T ss_pred eEeEEEEEEEEEC-------------CEEEEEec--CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceEEEEEee
Confidence 4566777777752 27999998 789999999999999999999999999999986533300
Q ss_pred ---------c----cc-------------CCCceeeEEEEeHhHHHhhcCChh
Q 030947 112 ---------A----EW-------------PEKNVRSRKWMSVAEARKVCQHWW 138 (168)
Q Consensus 112 ---------~----~~-------------~e~e~~~~~W~~~~e~~~~~~~~~ 138 (168)
. .| ++.+..++.|++++++.++...+.
T Consensus 82 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~ 134 (154)
T 2pqv_A 82 RFEVDGVSYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNIQLVPV 134 (154)
T ss_dssp EEEETTEEEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGSCEEST
T ss_pred eecCCCCcceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhcCcCcH
Confidence 0 00 122356799999999999754443
No 45
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.66 E-value=7.2e-16 Score=114.63 Aligned_cols=88 Identities=18% Similarity=0.211 Sum_probs=66.1
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeC-------CCceeccceeccCCCCHHHHHHHHHHHHHcCccceecc
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-------GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQ 110 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-------~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~ 110 (168)
.+..+++++++. +.+|||+++.. .+.|.||||+++.||++.+||.||++||||+.+.....
T Consensus 12 ~~~~~~~vi~~~------------~~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~ 79 (159)
T 1sjy_A 12 ELRAAGVVLLNE------------RGDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKF 79 (159)
T ss_dssp CEEEEEEEEBCT------------TCCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEE
T ss_pred EEEeEEEEEEeC------------CCCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEE
Confidence 455667777653 23799999873 37899999999999999999999999999998643320
Q ss_pred c-----------------------c-c-c---CCCceeeEEEEeHhHHHhhcCCh
Q 030947 111 L-----------------------A-E-W---PEKNVRSRKWMSVAEARKVCQHW 137 (168)
Q Consensus 111 ~-----------------------~-~-~---~e~e~~~~~W~~~~e~~~~~~~~ 137 (168)
+ . . . +..|..++.|++++++.+++...
T Consensus 80 l~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 80 LGAYLGRFPDGVLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHTT
T ss_pred EEEEecccCCCceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhcc
Confidence 0 0 0 0 23366789999999999986544
No 46
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.64 E-value=1.6e-16 Score=118.63 Aligned_cols=75 Identities=24% Similarity=0.260 Sum_probs=53.6
Q ss_pred eEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCccceecccc----------------------cc------
Q 030947 63 LEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQLA----------------------EW------ 114 (168)
Q Consensus 63 ~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~~----------------------~~------ 114 (168)
.+|||++|. .+.|.||||+++.||++.+||.||++||||+++.....+. .|
T Consensus 33 ~~vLL~~r~-~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 111 (153)
T 3eds_A 33 GEILFQYPG-GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGGKEYRYTYSNGDEVEYIVVVFECEVTS 111 (153)
T ss_dssp CCEEEECC----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSGGGEEECTTSCEEEEEEEEEEEEEEE
T ss_pred CeEEEEEcC-CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEecccceeeecCCCCeEEEEEEEEEEEecC
Confidence 479998887 7899999999999999999999999999999865433110 00
Q ss_pred -----CCCceeeEEEEeHhHHHhhcC-Chh
Q 030947 115 -----PEKNVRSRKWMSVAEARKVCQ-HWW 138 (168)
Q Consensus 115 -----~e~e~~~~~W~~~~e~~~~~~-~~~ 138 (168)
++.|..+++|+++++++++.. +|.
T Consensus 112 ~~~~~~~~E~~~~~W~~~~el~~l~~~~p~ 141 (153)
T 3eds_A 112 GELRSIDGESLKLQYFSLSEKPPLALPYPD 141 (153)
T ss_dssp ECCC-------CEEEECGGGCCCBSSCCCG
T ss_pred CccccCCCcEEEEEEECHHHCchhcccCcc
Confidence 123566899999999998753 553
No 47
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.63 E-value=2.6e-15 Score=115.93 Aligned_cols=100 Identities=16% Similarity=0.099 Sum_probs=72.4
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeC-----CCceec-cceeccCCCCHHHHHHHHHHHHHcCcccee-cc
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGMLF-PKGGWEIDESIQEAALRETIEEAGVTGIVE-DQ 110 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-----~~~W~l-PgG~ve~gEt~~~aA~REl~EEtGi~~~~~-~~ 110 (168)
.+..+++++++. +.+|||++|.. +|.|.| |||+++.|||+.+||.||++||||+.+... ..
T Consensus 31 ~~~~v~~~i~~~------------~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~ 98 (190)
T 1hzt_A 31 LHLAFSSWLFNA------------KGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESI 98 (190)
T ss_dssp CEECEEEEEECT------------TCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEE
T ss_pred eEEEEEEEEEcC------------CCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhhee
Confidence 345677777753 23799999864 488999 999999999999999999999999987554 20
Q ss_pred ---c----------------cc----------cCCCceeeEEEEeHhHHHhhc------CChhHHHHHHHHHHH
Q 030947 111 ---L----------------AE----------WPEKNVRSRKWMSVAEARKVC------QHWWMKEALDRLVMR 149 (168)
Q Consensus 111 ---~----------------~~----------~~e~e~~~~~W~~~~e~~~~~------~~~~~~~~l~~~~~~ 149 (168)
+ .. .+..|..+++|++++++.+++ ..+.++.++..+.++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~p~~~~~~~~~~~~ 172 (190)
T 1hzt_A 99 YPDFRYRATDPSGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREAR 172 (190)
T ss_dssp ETTCEEEEECTTSCEEEEECCEEEEEBCSCCCCCTTTEEEEEEECHHHHHHHHHHCGGGBCHHHHHHHHSHHHH
T ss_pred eeeEEEEeeCCCCCcceEEEEEEEEecCCCCcCCccceeeEEEecHHHHHHHHHcChhhcCchHHHHHHHHHHH
Confidence 0 00 023367789999999999874 345555555555444
No 48
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.63 E-value=5.3e-16 Score=118.76 Aligned_cols=75 Identities=19% Similarity=0.120 Sum_probs=58.8
Q ss_pred eEEEEEEEeC----CCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc-------------------cc------
Q 030947 63 LEVLVISSQK----GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL-------------------AE------ 113 (168)
Q Consensus 63 ~~vLLv~r~~----~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~-------------------~~------ 113 (168)
.+|||+++.+ .+.|.||||+++.|||+.+||.||++||||+.+.....+ ..
T Consensus 53 ~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~~~ 132 (182)
T 2yvp_A 53 GTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLIPLPSFHPQPSFTAVVFHPFLALKARVVTP 132 (182)
T ss_dssp SEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEECCCBCSCTTTBCCEEEEEEECSCEECSC
T ss_pred CEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEEEEEEeCCCCccccEEEEEEEeccccCCC
Confidence 3799998863 468999999999999999999999999999986543300 00
Q ss_pred --cCCCceeeEEEEeHhHHHhhcCCh
Q 030947 114 --WPEKNVRSRKWMSVAEARKVCQHW 137 (168)
Q Consensus 114 --~~e~e~~~~~W~~~~e~~~~~~~~ 137 (168)
.+..|..++.|++++++.+++..+
T Consensus 133 ~~~~~~E~~~~~W~~~~el~~~~~~~ 158 (182)
T 2yvp_A 133 PTLEEGELLESLELPLTEVYALLAKG 158 (182)
T ss_dssp CCCCTTCCEEEEEEEHHHHHHHHHTT
T ss_pred CCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 123366789999999999986544
No 49
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.62 E-value=1.6e-15 Score=126.13 Aligned_cols=99 Identities=18% Similarity=0.117 Sum_probs=70.8
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeC---CCceeccceeccCCCCHHHHHHHHHHHHHcCccceec-----
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVED----- 109 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~----- 109 (168)
.+..+++++++. ++|||+++.+ .|.|.||||+++.|||+.+||.||++||||+++....
T Consensus 202 ~~~~v~~vi~~~-------------~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~ 268 (341)
T 2qjo_A 202 TFITTDAVVVQA-------------GHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSI 268 (341)
T ss_dssp CEEEEEEEEEET-------------TEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTE
T ss_pred CceEEEEEEEeC-------------CEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccccccccc
Confidence 356777888742 2899999875 5789999999999999999999999999999865211
Q ss_pred ----c-------------cc---------c----cCCCceeeEEEEeHhHHHhh--cCChhHHHHHHHHHHH
Q 030947 110 ----Q-------------LA---------E----WPEKNVRSRKWMSVAEARKV--CQHWWMKEALDRLVMR 149 (168)
Q Consensus 110 ----~-------------~~---------~----~~e~e~~~~~W~~~~e~~~~--~~~~~~~~~l~~~~~~ 149 (168)
. .. . .++.|..+++|++++++.++ ...+..+.++..+.+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~il~~~~~~ 340 (341)
T 2qjo_A 269 VDSHVFDAPGRSLRGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQEEQIYEDHFQIIQHFVSK 340 (341)
T ss_dssp EEEEEECCTTSCTTSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHTGGGBCTTHHHHHHHHC--
T ss_pred cceEEEeCCCCCCCCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhhhhhchHHHHHHHHHHhc
Confidence 0 00 0 01235667999999999997 5667777777766543
No 50
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.61 E-value=1.9e-15 Score=116.88 Aligned_cols=89 Identities=20% Similarity=0.175 Sum_probs=65.2
Q ss_pred CceeEEEEEEEEeeccccccccccCceEEEEEEEeC-----CCceeccceeccCCCCHHHHHHHHHHHHHcCccceecc-
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQ- 110 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-----~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~- 110 (168)
..+..+++++++.+ ++.+|||++|.. .+.|.||||+++.||++.+||.||++||||+++.....
T Consensus 32 ~~~~~~~~v~i~~~----------~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l 101 (194)
T 1nqz_A 32 HYRRAAVLVALTRE----------ADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLL 101 (194)
T ss_dssp -CEEEEEEEEEESS----------SSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEEE
T ss_pred CCceEEEEEEEecC----------CCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEEE
Confidence 34556666776432 334899999864 48899999999999999999999999999998654330
Q ss_pred --------------------c------cccCCCceeeEEEEeHhHH-HhhcC
Q 030947 111 --------------------L------AEWPEKNVRSRKWMSVAEA-RKVCQ 135 (168)
Q Consensus 111 --------------------~------~~~~e~e~~~~~W~~~~e~-~~~~~ 135 (168)
. ...+..|..++.|++++++ .+...
T Consensus 102 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 153 (194)
T 1nqz_A 102 GELDDVFTPVGFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPLV 153 (194)
T ss_dssp EECCCEEETTTEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSCCE
T ss_pred EEccCccCCCCeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccCCCc
Confidence 0 0112346778999999999 77543
No 51
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.61 E-value=1.6e-15 Score=112.58 Aligned_cols=101 Identities=17% Similarity=0.234 Sum_probs=70.1
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeCC--CceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc----
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG--KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL---- 111 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~--~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~---- 111 (168)
.+..+++++++.+ . ++..|||++|... ..|.||||+++.|||+.+||.||++||||+.+.....+
T Consensus 7 ~~~~~~~ii~~~~---~------~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~ 77 (155)
T 2b06_A 7 TILTNICLIEDLE---T------QRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIKN 77 (155)
T ss_dssp EEEEEEEEEEETT---T------TEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEEEEEEE
T ss_pred cEEEEEEEEEECC---C------CeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCccccCCcEEEEEe
Confidence 4567777777632 0 2234888877643 23899999999999999999999999999986533300
Q ss_pred -----------c---------ccCCCceeeEEEEeHhHHHhhcCChhHHHHHHHHH
Q 030947 112 -----------A---------EWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLV 147 (168)
Q Consensus 112 -----------~---------~~~e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~ 147 (168)
. .....+..+++|++++++.++...+.++.++..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 133 (155)
T 2b06_A 78 WPLDTGGRYIVICYKATEFSGTLQSSEEGEVSWVQKDQIPNLNLAYDMLPLMEMME 133 (155)
T ss_dssp EECTTSCEEEEEEEEECEEEECCCCBTTBEEEEEEGGGGGGSCBCTTHHHHHHHHH
T ss_pred eccCCCceEEEEEEEEEecCCCCCCCcceeeEEeeHHHhhhCCCChhHHHHHHHHh
Confidence 0 01123566799999999999887777777776554
No 52
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.61 E-value=2.9e-16 Score=112.59 Aligned_cols=84 Identities=23% Similarity=0.281 Sum_probs=64.9
Q ss_pred eEEEEEEEeCC----CceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc--------------ccc---------C
Q 030947 63 LEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL--------------AEW---------P 115 (168)
Q Consensus 63 ~~vLLv~r~~~----~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~--------------~~~---------~ 115 (168)
++|||++|... |.|.||||+++.||++.+||.||++||||+.+.....+ ..| .
T Consensus 16 ~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (129)
T 1mut_A 16 NEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVERWEGEPW 95 (129)
T ss_dssp TEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECCCCCCBCCCSSCEEECCCEEEEECSSCCC
T ss_pred CEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceEEEEEEEecCCceEEEEEEEEEccCCccC
Confidence 48999998754 88999999999999999999999999999987544311 000 1
Q ss_pred CCceeeEEEEeHhHHHhhcCChhHHHHHHHH
Q 030947 116 EKNVRSRKWMSVAEARKVCQHWWMKEALDRL 146 (168)
Q Consensus 116 e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~ 146 (168)
..+..++.|++++++.++...+.++.+++.+
T Consensus 96 ~~e~~~~~W~~~~el~~~~~~~~~~~~l~~l 126 (129)
T 1mut_A 96 GKEGQPGEWMSLVGLNADDFPPANEPVIAKL 126 (129)
T ss_dssp CCSSCCCEEEESSSCCTTTSCTTCHHHHHHH
T ss_pred CcccceeEEeCHHHcccccCCchhHHHHHHH
Confidence 2255678999999999987777666666553
No 53
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.61 E-value=4.1e-15 Score=122.12 Aligned_cols=90 Identities=23% Similarity=0.340 Sum_probs=66.7
Q ss_pred CceeEEEEEEEEeeccccccccccCceEEEEEEEeC---CCceeccceeccCCCCHHHHHHHHHHHHHcCccce--eccc
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIV--EDQL 111 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~--~~~~ 111 (168)
...+.+++|++..+ ++ .++.+|||++|.. .|.|.||||+++.||++.+||.||++||||+++.. +.++
T Consensus 37 ~p~v~v~~vv~~~~---~~----~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~l 109 (273)
T 2fml_A 37 KPSLTVDMVLLCYN---KE----ADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQL 109 (273)
T ss_dssp CCEEEEEEEEEEEE---TT----TTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEEE
T ss_pred CCceEEEEEEEEEc---CC----CCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEEE
Confidence 45788999999875 10 0156999999975 47899999999999999999999999999975332 2100
Q ss_pred c--------------------------ccCCCceeeEEEEeHhHHHhh
Q 030947 112 A--------------------------EWPEKNVRSRKWMSVAEARKV 133 (168)
Q Consensus 112 ~--------------------------~~~e~e~~~~~W~~~~e~~~~ 133 (168)
. ..+..+..++.|++++++.+.
T Consensus 110 ~~~~~~~r~~~~~~~~~~y~a~~~~~~~~~~~E~~~~~W~~~~e~~~~ 157 (273)
T 2fml_A 110 HSFSRPDRDPRGWVVTVSYLAFIGEEPLIAGDDAKEVHWFNLERHGQH 157 (273)
T ss_dssp EEECCTTSSTTSSEEEEEEEEECCCCCCCCCTTEEEEEEEEEEEETTE
T ss_pred EEEcCCCCCCCceEEEEEEEEEeCCCCCCCCcceeeEEEEEhhHhhhh
Confidence 0 012346778999999986543
No 54
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.60 E-value=4.2e-15 Score=124.47 Aligned_cols=99 Identities=18% Similarity=0.212 Sum_probs=76.1
Q ss_pred eeEEEEEEEEeeccccccccccCceEEEEEEEeC---CCceeccceeccCCCCHHHHHHHHHHHHHcCccceec------
Q 030947 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVED------ 109 (168)
Q Consensus 39 r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~------ 109 (168)
+..+++++++. .+|||+++.. .+.|.||||+++.|||+.+||.||++||||+++....
T Consensus 208 ~~~v~~vv~~~-------------~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~ 274 (352)
T 2qjt_B 208 FVTVDALVIVN-------------DHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKR 274 (352)
T ss_dssp EEEEEEEEEET-------------TEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEE
T ss_pred ceEEEEEEEEC-------------CEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceee
Confidence 46677777742 2899999875 3789999999999999999999999999999865210
Q ss_pred ------c---------c----------cc-----cCCCceeeEEEEeH-hHHHhh--cCChhHHHHHHHHHHHH
Q 030947 110 ------Q---------L----------AE-----WPEKNVRSRKWMSV-AEARKV--CQHWWMKEALDRLVMRL 150 (168)
Q Consensus 110 ------~---------~----------~~-----~~e~e~~~~~W~~~-~e~~~~--~~~~~~~~~l~~~~~~~ 150 (168)
. . .. .++.|..+++|+++ +++.++ ...+..+.++..+.+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~~~~~~~~~~~il~~~~~~l 348 (352)
T 2qjt_B 275 CEKVFDYPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICDRMLEDHYQIITILLEEC 348 (352)
T ss_dssp EEEEECCTTSCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHTTTSBSTTHHHHHHHHHHHT
T ss_pred eeEEecCCCCCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhhhhhhChhHHHHHHHHHHHh
Confidence 0 0 00 01246778999999 999996 56777888888887765
No 55
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.59 E-value=2.9e-15 Score=117.38 Aligned_cols=76 Identities=24% Similarity=0.129 Sum_probs=59.1
Q ss_pred EEEEEEEeCC----CceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc--------------c------------c
Q 030947 64 EVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL--------------A------------E 113 (168)
Q Consensus 64 ~vLLv~r~~~----~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~--------------~------------~ 113 (168)
+|||+++.+. +.|.||||++++||++.+||+||++||||+.+.....+ . .
T Consensus 61 ~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~a~~~~~~~~~ 140 (198)
T 1vhz_A 61 HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPESLE 140 (198)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEECCTTTCCCEEEEEEEEEEEECCCC
T ss_pred EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEEeCCCCccCcEEEEEEEEeCCcccCC
Confidence 8999987643 47999999999999999999999999999987544310 0 0
Q ss_pred cCCCceeeEEEEeHhHHHhhcCChhH
Q 030947 114 WPEKNVRSRKWMSVAEARKVCQHWWM 139 (168)
Q Consensus 114 ~~e~e~~~~~W~~~~e~~~~~~~~~~ 139 (168)
.++.|..++.|++++++.+++..+.+
T Consensus 141 ~~~~E~~~~~w~~~~el~~~~~~~~i 166 (198)
T 1vhz_A 141 GDEPEPLPQVRWPLAHMMDLLEDPDF 166 (198)
T ss_dssp CCCSSCCCEEEEEGGGGGGGGGCTTT
T ss_pred CCCCceEEEEEEEHHHHHHHHHcCCC
Confidence 12335667899999999998865543
No 56
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.59 E-value=5.3e-15 Score=121.76 Aligned_cols=90 Identities=14% Similarity=0.149 Sum_probs=69.3
Q ss_pred eEEEEEEEeC--CCceeccceeccCCCCHHHHHHHHHHHHHcCccceecccc-----------------------ccCCC
Q 030947 63 LEVLVISSQK--GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQLA-----------------------EWPEK 117 (168)
Q Consensus 63 ~~vLLv~r~~--~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~~-----------------------~~~e~ 117 (168)
.+|||+++.. .|.|.||||+++.|||+++||.||++||||+++.....+. .....
T Consensus 151 ~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~~~~~~~~~~~~~f~a~~~~~~~~~~~~ 230 (269)
T 1vk6_A 151 DSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPK 230 (269)
T ss_dssp TEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEETTEEEEEEEEEEEEECCCCCCTT
T ss_pred CEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEEEEEEecCCCCEEEEEEEEEECCCCcCCCCc
Confidence 3899999875 4789999999999999999999999999999876444110 01234
Q ss_pred ceeeEEEEeHhHHHhhcCChhHH-HHHHHHHHHHhc
Q 030947 118 NVRSRKWMSVAEARKVCQHWWMK-EALDRLVMRLTS 152 (168)
Q Consensus 118 e~~~~~W~~~~e~~~~~~~~~~~-~~l~~~~~~~~~ 152 (168)
|..+++||++++++.+.....+. .++..+.+.+.+
T Consensus 231 E~~~~~W~~~~el~~l~~~~si~~~li~~~l~~~r~ 266 (269)
T 1vk6_A 231 ELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRA 266 (269)
T ss_dssp TEEEEEEEETTSCCSCCCTTSHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEHHHhhhcccCcHHHHHHHHHHHHHHHh
Confidence 77889999999999876655444 566666666654
No 57
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.59 E-value=2.6e-15 Score=123.46 Aligned_cols=86 Identities=23% Similarity=0.343 Sum_probs=63.0
Q ss_pred eEEEEEEEEeeccccccccccCceEEEEEEEeC-CCceeccceeccCCCCHHHHHHHHHHHHHcCccceecc--------
Q 030947 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQ-------- 110 (168)
Q Consensus 40 ~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~-------- 110 (168)
.++++|+++. ++++|||+++.+ ++.|.+|||+++.|||+.+||+||++||||+++.....
T Consensus 102 ~~v~avv~~~-----------~~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~~~~~~~~~~ 170 (271)
T 2a6t_A 102 PVRGAIMLDM-----------SMQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRINPNEFIDMT 170 (271)
T ss_dssp CEEEEEEBCS-----------SSSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTCCTTCEEEEE
T ss_pred CeEEEEEEEC-----------CCCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceeeeeeeeeccCC
Confidence 4567888764 234899999875 57899999999999999999999999999998653220
Q ss_pred -----c-----cc---------cCCCceeeEEEEeHhHHHhhcCC
Q 030947 111 -----L-----AE---------WPEKNVRSRKWMSVAEARKVCQH 136 (168)
Q Consensus 111 -----~-----~~---------~~e~e~~~~~W~~~~e~~~~~~~ 136 (168)
. .. ..+.|..++.|++++++.++...
T Consensus 171 ~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 171 IRGQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp ETTEEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC--
T ss_pred cCCceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhc
Confidence 0 00 01236778999999999886543
No 58
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.58 E-value=3.2e-15 Score=113.37 Aligned_cols=87 Identities=25% Similarity=0.211 Sum_probs=62.7
Q ss_pred eeEEEEEEEEeeccccccccccCceEEEEEEEeC----CCceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc---
Q 030947 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK----GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL--- 111 (168)
Q Consensus 39 r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~----~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~--- 111 (168)
+..+++++++ + + +|||+++.+ .+.|.||||+++.|||+.+||.||++||||+ +.....+
T Consensus 34 ~~~v~vii~~-~---~---------~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~~ 99 (170)
T 1v8y_A 34 KPAVAVIALR-E---G---------RMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYLFSY 99 (170)
T ss_dssp CCEEEEEEEE-T---T---------EEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEEEEE
T ss_pred CCeEEEEEEE-C---C---------EEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceeeEEE
Confidence 3567777776 3 1 799998753 3689999999999999999999999999999 6543310
Q ss_pred -----------cc------------cCCCceeeEEEEeHhHHHhhcCChhH
Q 030947 112 -----------AE------------WPEKNVRSRKWMSVAEARKVCQHWWM 139 (168)
Q Consensus 112 -----------~~------------~~e~e~~~~~W~~~~e~~~~~~~~~~ 139 (168)
.. .++.|..++.|++++++.+++..+.+
T Consensus 100 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~ 150 (170)
T 1v8y_A 100 FVSPGFTDEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQRGEV 150 (170)
T ss_dssp ESCTTTBCCEEEEEEEEEEEECC--------CEEEEECHHHHHHHHHTTSC
T ss_pred ecCCCccccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHHHHCCCE
Confidence 00 01336678999999999998644433
No 59
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.57 E-value=6.6e-15 Score=111.26 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=69.3
Q ss_pred eeEEEEEEEEeeccccccccccCceEEEEEEEeC-----CCcee-ccceeccCCCCHHHHHHHHHHHHHcCcccee--c-
Q 030947 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGML-FPKGGWEIDESIQEAALRETIEEAGVTGIVE--D- 109 (168)
Q Consensus 39 r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-----~~~W~-lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~--~- 109 (168)
+..+++++++.+ .+|||++|.. .|.|. ||||+++.|||+.+||.||++||||+.+... .
T Consensus 34 ~~~v~v~i~~~~------------~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~ 101 (171)
T 1q27_A 34 VRVVNAFLRNSQ------------GQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRP 101 (171)
T ss_dssp CEEEEEEEEETT------------TEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEE
T ss_pred ceEEEEEEECCC------------CeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEE
Confidence 556777777532 3899998753 47898 9999999999999999999999999986542 1
Q ss_pred --ccc-----------c----------cCCCceeeEEEEeHhHHHhhcC--ChhHHHHHHHHHHHH
Q 030947 110 --QLA-----------E----------WPEKNVRSRKWMSVAEARKVCQ--HWWMKEALDRLVMRL 150 (168)
Q Consensus 110 --~~~-----------~----------~~e~e~~~~~W~~~~e~~~~~~--~~~~~~~l~~~~~~~ 150 (168)
.+. . .+..+..+++|++++++.++.. .......+..+...+
T Consensus 102 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~l~~~~ 167 (171)
T 1q27_A 102 LASFSPFQTTLSSFMCVYELRSDATPIFNPNDISGGEWLTPEHLLARIAAGEAAKGDLAELVRRCY 167 (171)
T ss_dssp EEEECSSSSCCSSEEEEEEEECCCCCCSCTTTCSCCEEECHHHHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred EEEEeccCCCCccEEEEEEEEECCccccCchhhheEEEecHHHHHHHHhcCCCCchhHHHHHHHHH
Confidence 000 0 0123566899999999997532 223344555554444
No 60
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.57 E-value=6e-15 Score=114.71 Aligned_cols=88 Identities=17% Similarity=0.135 Sum_probs=63.4
Q ss_pred eEEEEEEEEeeccccccccccCceEEEEEEEe----------CCCceeccceeccCCCCHHHHHHHHHHHHHcCccceec
Q 030947 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQ----------KGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVED 109 (168)
Q Consensus 40 ~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~----------~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~ 109 (168)
..++++++.. ++.++||+++. ..+.|.||||+++ ||++.+||+||++||||+.+....
T Consensus 46 ~av~v~~~~~-----------~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~ 113 (191)
T 3o6z_A 46 NGATILLYNT-----------KKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVR 113 (191)
T ss_dssp CEEEEEEEET-----------TTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEE
T ss_pred CEEEEEEEEC-----------CCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEE
Confidence 4566666653 23489999886 4467999999999 999999999999999999875333
Q ss_pred cc------------------ccc-----------CCCceeeEEEEeHhHHHhhcCChhH
Q 030947 110 QL------------------AEW-----------PEKNVRSRKWMSVAEARKVCQHWWM 139 (168)
Q Consensus 110 ~~------------------~~~-----------~e~e~~~~~W~~~~e~~~~~~~~~~ 139 (168)
.+ ... .+.|..++.|++++++.+++....+
T Consensus 114 ~l~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~g~i 172 (191)
T 3o6z_A 114 KLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKTGEI 172 (191)
T ss_dssp EEEEEESCTTTBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHHSSC
T ss_pred EEEEEEeCCCccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHcCCC
Confidence 00 000 1336678999999999998754333
No 61
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.55 E-value=4.5e-14 Score=105.17 Aligned_cols=87 Identities=18% Similarity=0.248 Sum_probs=64.7
Q ss_pred ceEEEEEEEeCC----CceeccceeccCCCCHH-HHHHHHHHHHHc-Cccceecc--------------cccc----C--
Q 030947 62 DLEVLVISSQKG----KGMLFPKGGWEIDESIQ-EAALRETIEEAG-VTGIVEDQ--------------LAEW----P-- 115 (168)
Q Consensus 62 ~~~vLLv~r~~~----~~W~lPgG~ve~gEt~~-~aA~REl~EEtG-i~~~~~~~--------------~~~~----~-- 115 (168)
+.+|||++|... |.|.||||+++.||++. +||.||++|||| +.+..... +..| .
T Consensus 33 ~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 112 (155)
T 1x51_A 33 GAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQ 112 (155)
T ss_dssp SEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEECCCBCCBCSSCEEEEEEEEEECSSC
T ss_pred CCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeeecceEEEecCCccEEEEEEEEEEcCC
Confidence 358999998753 78999999999999996 999999999999 76532220 0001 1
Q ss_pred ---CCceeeEEEEeHhHHHhhcCChhHHHHHHHHHH
Q 030947 116 ---EKNVRSRKWMSVAEARKVCQHWWMKEALDRLVM 148 (168)
Q Consensus 116 ---e~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~ 148 (168)
..+...+.|++++++.++...+.++.++..+..
T Consensus 113 ~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 148 (155)
T 1x51_A 113 TPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQG 148 (155)
T ss_dssp CCCCCCCTTEEEEEHHHHHHSCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCccEEccHHHhhhcCCCHHHHHHHHHHHh
Confidence 124556899999999998777777777766544
No 62
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.55 E-value=8.3e-15 Score=115.14 Aligned_cols=75 Identities=20% Similarity=0.190 Sum_probs=55.5
Q ss_pred eEEEEEEEeC----CCceeccceecc-CCCCHHHHHHHHHHHHHcCccceeccc--------------cc----------
Q 030947 63 LEVLVISSQK----GKGMLFPKGGWE-IDESIQEAALRETIEEAGVTGIVEDQL--------------AE---------- 113 (168)
Q Consensus 63 ~~vLLv~r~~----~~~W~lPgG~ve-~gEt~~~aA~REl~EEtGi~~~~~~~~--------------~~---------- 113 (168)
.+|||+++.+ .+.|.||||+++ .||++.+||.||++||||+.+.....+ ..
T Consensus 55 ~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~~ 134 (207)
T 1mk1_A 55 GNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVG 134 (207)
T ss_dssp SEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEEEEEECSCTTTBCCCEEEEEEEEEEECC
T ss_pred CEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEEEEEEEcCCCccccEEEEEEEEccccCC
Confidence 4899998763 357999999999 999999999999999999986543310 00
Q ss_pred ----cCCCceeeEEEEeHhHHHhhcCCh
Q 030947 114 ----WPEKNVRSRKWMSVAEARKVCQHW 137 (168)
Q Consensus 114 ----~~e~e~~~~~W~~~~e~~~~~~~~ 137 (168)
.++.|..++.|++++++.+++..+
T Consensus 135 ~~~~~~~~E~~~~~Wv~~~el~~~~~~~ 162 (207)
T 1mk1_A 135 RPEAHHEEADMTMGWYPIAEAARRVLRG 162 (207)
T ss_dssp C----------CEEEEEHHHHHHHHHTT
T ss_pred CCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 112355689999999999987544
No 63
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.55 E-value=9e-15 Score=116.91 Aligned_cols=67 Identities=18% Similarity=0.096 Sum_probs=50.7
Q ss_pred CCceeccceeccC-CCCHHHHHHHHHHHHHcCcc--ceecc------------------ccc-------------cCCCc
Q 030947 73 GKGMLFPKGGWEI-DESIQEAALRETIEEAGVTG--IVEDQ------------------LAE-------------WPEKN 118 (168)
Q Consensus 73 ~~~W~lPgG~ve~-gEt~~~aA~REl~EEtGi~~--~~~~~------------------~~~-------------~~e~e 118 (168)
.+.|+||||+++. |||+.+||+||++||||+.+ ..+.. +.. .++.|
T Consensus 94 ~~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~g~~~~~~~~f~a~~~~~~~~~~~~~~~d~~E 173 (218)
T 3q91_A 94 GVTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEVTDAQRSGPGGGLVEEGE 173 (218)
T ss_dssp CEEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC---CCEEEEEEEEEECGGGBCC---------C
T ss_pred CeEEECCcceeCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEecCCCccceEEEEEEEEECCcccccCCCCCCCCCc
Confidence 4579999999999 99999999999999999987 32220 000 11336
Q ss_pred eeeEEEEeHhHHHhhcCChhH
Q 030947 119 VRSRKWMSVAEARKVCQHWWM 139 (168)
Q Consensus 119 ~~~~~W~~~~e~~~~~~~~~~ 139 (168)
..++.|++++++.+++....+
T Consensus 174 ~~ev~wv~l~el~~~i~~g~i 194 (218)
T 3q91_A 174 LIEVVHLPLEGAQAFADDPDI 194 (218)
T ss_dssp CEEEEEEEGGGHHHHHHCTTS
T ss_pred EEEEEEEEHHHHHHHHHcCCC
Confidence 778999999999998865544
No 64
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.55 E-value=1.2e-14 Score=114.60 Aligned_cols=87 Identities=23% Similarity=0.177 Sum_probs=62.4
Q ss_pred eEEEEEEEEeeccccccccccCceEEEEEEEeC---------CCceeccceeccCCCCHHHHHHHHHHHHHcCccceecc
Q 030947 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---------GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQ 110 (168)
Q Consensus 40 ~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~---------~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~ 110 (168)
..+++++++. ++.+|||+++.+ .+.|+||||++++||++.+||+||++||||+.+.....
T Consensus 58 ~av~vl~~~~-----------~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~ 126 (209)
T 1g0s_A 58 HAAVLLPFDP-----------VRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKP 126 (209)
T ss_dssp CEEEEEEEET-----------TTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEE
T ss_pred CEEEEEEEEC-----------CCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEE
Confidence 4566666652 234899987653 24699999999999999999999999999998753330
Q ss_pred ------------------ccc------------cCCCceeeEEEEeHhHHHhhcCCh
Q 030947 111 ------------------LAE------------WPEKNVRSRKWMSVAEARKVCQHW 137 (168)
Q Consensus 111 ------------------~~~------------~~e~e~~~~~W~~~~e~~~~~~~~ 137 (168)
+.. .++.|..++.|++++++.+++...
T Consensus 127 l~~~~~~~g~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g 183 (209)
T 1g0s_A 127 VLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEG 183 (209)
T ss_dssp EEEEESCTTTBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTT
T ss_pred eEEEecCCCccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 000 112245579999999999986543
No 65
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.52 E-value=9.4e-14 Score=115.30 Aligned_cols=114 Identities=15% Similarity=0.086 Sum_probs=80.2
Q ss_pred ceeEEEEEEEEeecccccc-ccc----cCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcCcc-------
Q 030947 38 RRQVVGCIPYRYKCVKQSL-DIN----EEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTG------- 105 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~-v~~----~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~------- 105 (168)
.+..+.+|+.+.+...+|. +.+ .+..+|||++|...|.|.||||+++.||++.+||+||++||||+..
T Consensus 109 p~~a~~~vv~~~~~~~~g~~~~~~~~g~~~l~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~ 188 (292)
T 1q33_A 109 PNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEK 188 (292)
T ss_dssp EEEEEEEEEEEECBCTTSCBCBCTTTCSBCEEEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHH
T ss_pred ccccceeeeeeecccccCceeeeccCCCCceEEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCCccccccccc
Confidence 3457888887764222232 111 1346899999988899999999999999999999999999999872
Q ss_pred -----ce---e---------------------c-----c-ccc-----------cCCCceeeEEEEeHhHHHhhcCChhH
Q 030947 106 -----IV---E---------------------D-----Q-LAE-----------WPEKNVRSRKWMSVAEARKVCQHWWM 139 (168)
Q Consensus 106 -----~~---~---------------------~-----~-~~~-----------~~e~e~~~~~W~~~~e~~~~~~~~~~ 139 (168)
.+ . . . ... .+..+..+++||++++++.+ ....
T Consensus 189 ~~l~~~l~~l~~~~g~~vy~~~~~dpr~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L--~~~h 266 (292)
T 1q33_A 189 REIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL--YASH 266 (292)
T ss_dssp HHHHHHHHHHTTTSEEEEEEEECCCTTCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCC--STTH
T ss_pred hhhHHHHHHHhhcccceeecccccCCCCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCccc--CHhH
Confidence 00 0 0 0 000 01235678999999999874 4567
Q ss_pred HHHHHHHHHHHhcc
Q 030947 140 KEALDRLVMRLTSQ 153 (168)
Q Consensus 140 ~~~l~~~~~~~~~~ 153 (168)
+.++.++.+++...
T Consensus 267 ~~il~~~~~~~~a~ 280 (292)
T 1q33_A 267 SQFIKLVAEKRDAH 280 (292)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhcCc
Confidence 78888887776543
No 66
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.52 E-value=2.3e-14 Score=114.37 Aligned_cols=100 Identities=18% Similarity=0.130 Sum_probs=68.5
Q ss_pred hhhccccccccccC----CceeEEEEEEEEeeccccccccccCceEEEEEEEeCC-------Cceec-cceeccCCCC--
Q 030947 23 LVSRTGRHLQRYQK----GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-------KGMLF-PKGGWEIDES-- 88 (168)
Q Consensus 23 ~~~~~g~~~~r~~~----~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~-------~~W~l-PgG~ve~gEt-- 88 (168)
++..-|+.+.|-.. .+++.+..+++..+ ++|||++|..+ +.|.+ |||+++.|||
T Consensus 47 ~~~~~~~~~~Rg~~e~d~~~~q~i~~~II~~~------------grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~ 114 (211)
T 3e57_A 47 FLDQYGFFRERDEAEYDETTKQVIPYVVIMDG------------DRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGAT 114 (211)
T ss_dssp HHHHHCEEEEHHHHTTCTTEEEEEEEEEEEET------------TEEEEEEC------------CBSSEECCCBGGGCSS
T ss_pred HHhcCCEEEEccccccCCcccceEEEEEEEEC------------CEEEEEEECCCCCcccccCCcccccceEEeCCCCCC
Confidence 55555666655433 56666665555432 28999998643 57998 9999999999
Q ss_pred H----HHHHHHHHHHHHcCccceeccc----------------ccc---------CCCceeeEEEEeHhHHHhhc
Q 030947 89 I----QEAALRETIEEAGVTGIVEDQL----------------AEW---------PEKNVRSRKWMSVAEARKVC 134 (168)
Q Consensus 89 ~----~~aA~REl~EEtGi~~~~~~~~----------------~~~---------~e~e~~~~~W~~~~e~~~~~ 134 (168)
+ .+||+||++||||+++.....+ ..| .+.+..+++|+++++++++.
T Consensus 115 p~EtleeAa~REl~EEtGl~v~~~~~ig~~~~~~~~~~~~~l~~~f~~~~~~g~~~~~E~~~~~W~~~~eL~~~~ 189 (211)
T 3e57_A 115 PREAFLKGLEREVNEEVDVSLRELEFLGLINSSTTEVSRVHLGALFLGRGKFFSVKEKDLFEWELIKLEELEKFS 189 (211)
T ss_dssp HHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECCSSHHHHTEEEEEEEEEEEEEEESCTTTCEEEEEEHHHHHHHG
T ss_pred chhhHHHHHHHHHHHHhCCeeeccEEEEEEeccCCCCCeEEEEEEEEEEeCCceeCCCCeEEEEEEEHHHHHHhH
Confidence 5 9999999999999986544410 001 23356689999999999974
No 67
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.51 E-value=6.2e-14 Score=110.47 Aligned_cols=74 Identities=19% Similarity=0.183 Sum_probs=57.1
Q ss_pred ceEEEEEEEeC----CCceeccceeccCCCCHHHHHHHHHHHHHcCccceecc------------------c---c----
Q 030947 62 DLEVLVISSQK----GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQ------------------L---A---- 112 (168)
Q Consensus 62 ~~~vLLv~r~~----~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~------------------~---~---- 112 (168)
..+|||+++.+ .+.|.||||+++.||++.+||+||++||||+.+..... + .
T Consensus 76 ~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~ 155 (212)
T 2dsc_A 76 YECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDA 155 (212)
T ss_dssp CCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEECCCEESCTTTBCCEEEEEEEEEETTSG
T ss_pred CcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEEeccEEcCCCccCceEEEEEEEEeCccc
Confidence 35899988643 34799999999999999999999999999998653330 0 0
Q ss_pred -------ccCCCceeeEEEEeHhHHHhhcC
Q 030947 113 -------EWPEKNVRSRKWMSVAEARKVCQ 135 (168)
Q Consensus 113 -------~~~e~e~~~~~W~~~~e~~~~~~ 135 (168)
...+.|..++.|++++++.+++.
T Consensus 156 ~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 156 ENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp GGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred cccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 00123667899999999999875
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.36 E-value=1.1e-12 Score=111.77 Aligned_cols=87 Identities=9% Similarity=-0.057 Sum_probs=68.8
Q ss_pred eEEEEEEEeCC----CceeccceeccCCCCHHHHHHHHHHHHHcCccceeccc--------------cc----cC--CCc
Q 030947 63 LEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVEDQL--------------AE----WP--EKN 118 (168)
Q Consensus 63 ~~vLLv~r~~~----~~W~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~~~--------------~~----~~--e~e 118 (168)
++|||.+|... |.|+||||+++.| |+.+|+.||++||||+.+.....+ .. +. ..+
T Consensus 252 g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~l~~~~h~~~h~~~~~~~~~~~~~~~~~e 330 (369)
T 3fsp_A 252 GRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQLTVFPGRLVHGGPV 330 (369)
T ss_dssp SEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCCCCEEEEECSSEEEEEEEEEEEECCSSCC
T ss_pred CEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecccccEEEEcceEEEEEEEEEEEEcCCCCC
Confidence 48999999753 7899999999999 999999999999999987544311 00 11 235
Q ss_pred eeeEEEEeHhHHHhhcCChhHHHHHHHHHHHH
Q 030947 119 VRSRKWMSVAEARKVCQHWWMKEALDRLVMRL 150 (168)
Q Consensus 119 ~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~ 150 (168)
..++.|++++++.++...+.++.+++.+.+.+
T Consensus 331 ~~~~~Wv~~~el~~~~l~~~~~~il~~l~~~~ 362 (369)
T 3fsp_A 331 EEPYRLAPEDELKAYAFPVSHQRVWREYKEWA 362 (369)
T ss_dssp CTTEEEEEGGGGGGSCCCHHHHHHHHHHHHHT
T ss_pred ccccEEeeHHHhhhCCCCHHHHHHHHHHHHHh
Confidence 66789999999999888888888888776654
No 69
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.35 E-value=6.7e-12 Score=101.28 Aligned_cols=60 Identities=30% Similarity=0.353 Sum_probs=48.9
Q ss_pred CceeEEEEEEEEeeccccccccccCc-eEEEEEEEeC-----CCceeccceeccCCCC--------------------HH
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINEED-LEVLVISSQK-----GKGMLFPKGGWEIDES--------------------IQ 90 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~~~-~~vLLv~r~~-----~~~W~lPgG~ve~gEt--------------------~~ 90 (168)
..|..+.+|+++.. . ++ .+|||++|.. .|.|.||||+++.+|+ +.
T Consensus 6 ~~r~aA~lill~~~---~------~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~ 76 (232)
T 3qsj_A 6 DIRKAATLVVIRDG---A------NKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALA 76 (232)
T ss_dssp CEEEEEEEEEEEEC---G------GGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHH
T ss_pred CCcceEEEEEEEcC---C------CCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHH
Confidence 45677788888753 1 23 6999999974 3789999999999987 58
Q ss_pred HHHHHHHHHHHcCcc
Q 030947 91 EAALRETIEEAGVTG 105 (168)
Q Consensus 91 ~aA~REl~EEtGi~~ 105 (168)
.||+||++||||+..
T Consensus 77 ~aAiRE~~EE~Gl~l 91 (232)
T 3qsj_A 77 VTALRETAEEIGWLL 91 (232)
T ss_dssp HHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHhCcee
Confidence 999999999999964
No 70
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.30 E-value=8.1e-12 Score=98.66 Aligned_cols=66 Identities=21% Similarity=0.169 Sum_probs=50.5
Q ss_pred CceeEEEEEEEEeecccccc--ccccCceEEEEEEEeCCCceeccceeccCCC-CHHHHHHHHHHHHHcCccc
Q 030947 37 GRRQVVGCIPYRYKCVKQSL--DINEEDLEVLVISSQKGKGMLFPKGGWEIDE-SIQEAALRETIEEAGVTGI 106 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~--v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gE-t~~~aA~REl~EEtGi~~~ 106 (168)
+.+..+.++++... .++ ++.+++.+|||.++ ..+.|.||||+++.|| |+.+||.||++||||+.+.
T Consensus 31 ~~~~~~~~~l~~~~---~~vv~~i~~~~~~vLl~~r-~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~ 99 (212)
T 1u20_A 31 GYKHACHALLHAPS---QAKLFDRVPIRRVLLMMMR-FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALA 99 (212)
T ss_dssp SCEEEEEEEEEEEC---CCEETTTEECCEEEEEEEE-TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGG
T ss_pred CCcccceEEEeCCC---ceEEEEEEecCCEEEEEEe-CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCcc
Confidence 44566677777653 221 12224568888877 5789999999999999 9999999999999999865
No 71
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.27 E-value=6.8e-12 Score=105.64 Aligned_cols=101 Identities=11% Similarity=0.116 Sum_probs=76.2
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHH-cCccceeccccc---
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEA-GVTGIVEDQLAE--- 113 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEt-Gi~~~~~~~~~~--- 113 (168)
.+..+|+|+.+. ++|||+ .+.| |.||||.+ +++..++|+||++||| |++++....+..
T Consensus 182 p~~~vgaii~~~-------------g~vLL~--~~~G-W~LPG~~~--~~~~~~~a~RE~~EEttGl~v~~~~L~~v~~~ 243 (321)
T 3rh7_A 182 GEIRLGAVLEQQ-------------GAVFLA--GNET-LSLPNCTV--EGGDPARTLAAYLEQLTGLNVTIGFLYSVYED 243 (321)
T ss_dssp SCEEEEEEEESS-------------SCEEEB--CSSE-EBCCEEEE--SSSCHHHHHHHHHHHHHSSCEEEEEEEEEEEC
T ss_pred CcceEEEEEEEC-------------CEEEEe--eCCC-ccCCcccC--CCChhHHHHHHHHHHhcCCEEeeceEEEEEEc
Confidence 568889998863 279999 5567 99998855 4444469999999997 999876662211
Q ss_pred -------------cCCCceeeEEEEeHhHHHhhc-CChhHHHHHHHHHHHHhcccCC
Q 030947 114 -------------WPEKNVRSRKWMSVAEARKVC-QHWWMKEALDRLVMRLTSQQLH 156 (168)
Q Consensus 114 -------------~~e~e~~~~~W~~~~e~~~~~-~~~~~~~~l~~~~~~~~~~~~~ 156 (168)
..+.+..+++||++++++... .++.++..|+++++....+.|.
T Consensus 244 ~~~~~~~i~f~~~~~~g~~~e~~~f~~~elp~~~~~~~~~~~~L~~y~~e~~~g~f~ 300 (321)
T 3rh7_A 244 KSDGRQNIVYHALASDGAPRQGRFLRPAELAAAKFSSSATADIINRFVLESSIGNFG 300 (321)
T ss_dssp TTTCCEEEEEEEEECSSCCSSSEEECHHHHTTCEESSHHHHHHHHHHHHTTSCSSCC
T ss_pred CCCceEEEEEEEEeCCCCeeeeEEECHHHCCCcccCCHHHHHHHHHHHHHhhcCCCC
Confidence 122345778999999999874 6799999999988887777655
No 72
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.24 E-value=6.9e-11 Score=95.16 Aligned_cols=85 Identities=11% Similarity=0.081 Sum_probs=62.0
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeC-----CCceecc-ceeccCC------CC---HHHHHHHHHHHHHc
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGMLFP-KGGWEID------ES---IQEAALRETIEEAG 102 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-----~~~W~lP-gG~ve~g------Et---~~~aA~REl~EEtG 102 (168)
.+..+++++++. ++++||.+|.. +|.|.+| ||+++.| |+ +.+||+||++||||
T Consensus 58 ~h~av~v~v~~~------------~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElG 125 (235)
T 2dho_A 58 LHRAFSVFLFNT------------ENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELG 125 (235)
T ss_dssp CEEEEEEEEECT------------TCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHC
T ss_pred eEEEEEEEEEcC------------CCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHC
Confidence 556677777753 23799988863 4789999 5999999 88 49999999999999
Q ss_pred Cccce-----ec---c---------------c-ccc----------CCCceeeEEEEeHhHHHhhc
Q 030947 103 VTGIV-----ED---Q---------------L-AEW----------PEKNVRSRKWMSVAEARKVC 134 (168)
Q Consensus 103 i~~~~-----~~---~---------------~-~~~----------~e~e~~~~~W~~~~e~~~~~ 134 (168)
+.+.. +. . + ..| ...|..+++|++++++.+++
T Consensus 126 i~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~~~~~~~Ev~~~~wv~~~el~~~l 191 (235)
T 2dho_A 126 IPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRMNVTLNPDPNEIKSYCYVSKEELKELL 191 (235)
T ss_dssp CCGGGSCGGGSEEEEEEEEEEECSSSBEEEEEEEEEEEECCCCCCCCTTTEEEEEEECHHHHHHHH
T ss_pred CCccccChhhcEEEEEEEEeccCCCccceeEEEEEEEEEECCCCcCChHHEEEEEEEcHHHHHHHH
Confidence 98541 11 0 0 000 13477889999999998865
No 73
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.24 E-value=6e-11 Score=96.23 Aligned_cols=85 Identities=12% Similarity=0.044 Sum_probs=61.9
Q ss_pred ceeEEEEEEEEeeccccccccccCceEEEEEEEeC-----CCceeccc-eeccCC------CCH---HHHHHHHHHHHHc
Q 030947 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGMLFPK-GGWEID------ESI---QEAALRETIEEAG 102 (168)
Q Consensus 38 ~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-----~~~W~lPg-G~ve~g------Et~---~~aA~REl~EEtG 102 (168)
.+..+++++++. ++++||.+|.. +|.|.+|+ |+++.| |++ .+||+||++||||
T Consensus 69 ~h~av~v~v~~~------------~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElG 136 (246)
T 2pny_A 69 LHRAFSVVLFNT------------KNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELG 136 (246)
T ss_dssp CEEEEEEEEECT------------TCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEEEEeC------------CCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHC
Confidence 456677777753 23799988863 47899995 999999 887 9999999999999
Q ss_pred Cccce-----ec---c---------------c-cc----c------CCCceeeEEEEeHhHHHhhc
Q 030947 103 VTGIV-----ED---Q---------------L-AE----W------PEKNVRSRKWMSVAEARKVC 134 (168)
Q Consensus 103 i~~~~-----~~---~---------------~-~~----~------~e~e~~~~~W~~~~e~~~~~ 134 (168)
+.+.. +. . + .. . ...|..+++|++++++.+++
T Consensus 137 i~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~~~~~~~Ev~~~~wv~~eel~~~l 202 (246)
T 2pny_A 137 IPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNVTLNPDPSETKSILYLSQEELWELL 202 (246)
T ss_dssp CCTTTCCGGGSEEEEEEEEEEESSSSBEEEEEEEEEEEECCCCCCCCTTTEEEEEEECHHHHHHHH
T ss_pred CCccccCccccEEEEEEEEEecCCCceeeeEEEEEEEEEECCCCCCChHHeeEEEEEeHHHHHHHH
Confidence 97531 01 0 0 00 0 12477889999999998865
No 74
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.14 E-value=3e-10 Score=94.82 Aligned_cols=89 Identities=16% Similarity=0.138 Sum_probs=65.8
Q ss_pred eeEEEEEEEEeeccccccccccCceEEEEEEEeC-----CCce-eccceeccCCCCHHHHHHHHHHHHHcCccceec---
Q 030947 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGM-LFPKGGWEIDESIQEAALRETIEEAGVTGIVED--- 109 (168)
Q Consensus 39 r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~-----~~~W-~lPgG~ve~gEt~~~aA~REl~EEtGi~~~~~~--- 109 (168)
+..+.+.+|..+ | ++.++||.+|.. +|.| .+|+|+++.||++.+||.||++||+|+......
T Consensus 118 ~~~vh~~~~~~~----~-----~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~ 188 (300)
T 3dup_A 118 AYGVHLNGYVGA----G-----ADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQAI 188 (300)
T ss_dssp EEEEEEEEEESC----G-----GGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCE
T ss_pred EEEEEEEEEEec----C-----CeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhcc
Confidence 455666677653 1 345899988863 5889 599999999999999999999999999864211
Q ss_pred ------------------c-------cc-----ccCCCceeeEEEEeHhHHHhhcCC
Q 030947 110 ------------------Q-------LA-----EWPEKNVRSRKWMSVAEARKVCQH 136 (168)
Q Consensus 110 ------------------~-------~~-----~~~e~e~~~~~W~~~~e~~~~~~~ 136 (168)
. +. ...+.|..+++|++++|+.+++..
T Consensus 189 ~~g~i~y~~~~~~G~~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~~l~~ 245 (300)
T 3dup_A 189 PVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEAVRT 245 (300)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHHHHHH
T ss_pred ccceEEEEEecCCCeEEEEEEEEEEEecCCCcCCCCchHhheEEEECHHHHHHHHhc
Confidence 0 00 002347889999999999988754
No 75
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.09 E-value=9.6e-11 Score=93.28 Aligned_cols=42 Identities=24% Similarity=0.306 Sum_probs=36.7
Q ss_pred EEEEEEEeCCCceeccceeccCCC-CHHHHHHHHHHHHHcCccc
Q 030947 64 EVLVISSQKGKGMLFPKGGWEIDE-SIQEAALRETIEEAGVTGI 106 (168)
Q Consensus 64 ~vLLv~r~~~~~W~lPgG~ve~gE-t~~~aA~REl~EEtGi~~~ 106 (168)
++||+.+. .+.|.||||+++.|| ++.+||+||++||||+.+.
T Consensus 66 ~~ll~~r~-~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~ 108 (217)
T 2xsq_A 66 AILMQMRF-DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAA 108 (217)
T ss_dssp EEEEEEET-TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGG
T ss_pred cEEEEEcc-CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCc
Confidence 45665544 689999999999999 9999999999999999876
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.04 E-value=3e-10 Score=89.94 Aligned_cols=61 Identities=21% Similarity=0.189 Sum_probs=47.7
Q ss_pred cccC-CceeEEEEEEEEeeccccccccccCceEEEEEEEeCCCceeccceeccCCCCHHHHHHHHHHHHHcC
Q 030947 33 RYQK-GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGV 103 (168)
Q Consensus 33 r~~~-~~r~~~g~v~~~~~~~~~g~v~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEt~~~aA~REl~EEtGi 103 (168)
.|.. +-|..+.+|++..+ . +..+|||+++. .+.|.||||+++.||++.+|++||+.||.|+
T Consensus 51 ~y~~~g~R~sV~avil~~~---~------~~phVLLlq~~-~~~f~LPGGkle~gE~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 51 EFDKIGMRRTVEGVLIVHE---H------RLPHVLLLQLG-TTFFKLPGGELNPGEDEVEGLKRLMTEILGR 112 (208)
T ss_dssp HHHHHCSEEEEEEEEEEEE---T------TEEEEEEEEEE-TTEEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred HHHhhCCceEEEEEEEEcC---C------CCcEEEEEEcC-CCcEECCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 4444 55666666655443 1 44689999984 5689999999999999999999999999995
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.86 E-value=1.2e-09 Score=86.03 Aligned_cols=64 Identities=13% Similarity=0.028 Sum_probs=47.3
Q ss_pred CceeEEEEEEEEeecccccccccc-CceEEEEEEEeCCCceeccceeccCCC-CHHHHHHHHHHHHHcC
Q 030947 37 GRRQVVGCIPYRYKCVKQSLDINE-EDLEVLVISSQKGKGMLFPKGGWEIDE-SIQEAALRETIEEAGV 103 (168)
Q Consensus 37 ~~r~~~g~v~~~~~~~~~g~v~~~-~~~~vLLv~r~~~~~W~lPgG~ve~gE-t~~~aA~REl~EEtGi 103 (168)
+++-.+.|.+|..+ .+..+.+ .-...+|++.+..|.|.||||+||.|| |+++|+.||+.||+|+
T Consensus 19 ~~~hach~mlya~~---~~~lfg~~p~r~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~ 84 (214)
T 3kvh_A 19 GWSHSCHAMLYAAN---PGQLFGRIPMRFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGC 84 (214)
T ss_dssp TCEEEEEEEEEEEE---EEEETTTEEEEEEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC--
T ss_pred CccEeeEEEEEcCC---ccccccccchhheEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCC
Confidence 56778888888765 2211111 112456777777799999999999999 9999999999999997
Done!