BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030949
(168 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24 OS=Arabidopsis thaliana
GN=At2g44860 PE=2 SV=1
Length = 159
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 93/143 (65%), Positives = 100/143 (69%), Gaps = 36/143 (25%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKA+R HG
Sbjct: 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
KDMT +D+TFEFE+KRNRPERYDRN
Sbjct: 61 KDMT------------------------------------KDTTFEFEKKRNRPERYDRN 84
Query: 121 LAENTLKAIKKIDKIRVAREERH 143
+ ENTL AIKKI KIR ARE +H
Sbjct: 85 VTENTLMAIKKIAKIRTAREAKH 107
>sp|Q86B05|RLP24_DICDI Probable ribosome biogenesis protein RLP24 OS=Dictyostelium
discoideum GN=rlp24 PE=2 SV=1
Length = 164
Score = 140 bits (353), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 90/148 (60%), Gaps = 36/148 (24%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+EKC+FCS VYPGHG+ FVRND K FRFCRSKCHKNFK+KRNPRK +WTKA+R+L+G
Sbjct: 1 MRIEKCYFCSGPVYPGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPRKTRWTKAFRKLNG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K+MT D T EFE+KRNRP +YDR
Sbjct: 61 KEMT------------------------------------VDKTLEFEKKRNRPVKYDRE 84
Query: 121 LAENTLKAIKKIDKIRVAREERHHKLRF 148
L NT+ A+ ++ KI+ RE+ +K R
Sbjct: 85 LINNTIIAMARVQKIKERREKTFYKNRM 112
>sp|Q10353|RLP24_SCHPO Ribosome biogenesis protein rlp24 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rlp24 PE=3 SV=1
Length = 192
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 81/149 (54%), Gaps = 35/149 (23%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+ C+FCS VYPGHGI FVRND+K+FRFCRSKCHKNFKMKRNPRKV WTKAYR+ HG
Sbjct: 1 MRVHTCYFCSGPVYPGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPRKVAWTKAYRKAHG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K+M + +RN P RYDRN
Sbjct: 61 KEMVYDTALAVTAA-----------------------------------RRNVPVRYDRN 85
Query: 121 LAENTLKAIKKIDKIRVAREERHHKLRFV 149
+ TL A+K++ ++ RE +K R
Sbjct: 86 VIATTLNAMKRVSQVHAKRERLFYKKRLA 114
>sp|Q99L28|RLP24_MOUSE Probable ribosome biogenesis protein RLP24 OS=Mus musculus
GN=Rsl24d1 PE=2 SV=1
Length = 163
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 86/140 (61%), Gaps = 36/140 (25%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+EKC+FCS +YPGHG+ FVRND K+FRFC+SKCHKNFK KRNPRKV+WTKA+R+ G
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++T D++FEFE++RN P +Y R
Sbjct: 61 KELT------------------------------------VDNSFEFEKRRNEPVKYQRE 84
Query: 121 LAENTLKAIKKIDKIRVARE 140
L T+ A+K++++I+ R+
Sbjct: 85 LWNKTIDAMKRVEEIKQKRQ 104
>sp|Q3SZ12|RLP24_BOVIN Probable ribosome biogenesis protein RLP24 OS=Bos taurus GN=RSL24D1
PE=2 SV=1
Length = 163
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 87/142 (61%), Gaps = 36/142 (25%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+EKC+FCS +YPGHG+ FVRND K+FRFC+SKCHKNFK KRNPRKV+WTKA+R+ G
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++T D++FEFE++RN P +Y R
Sbjct: 61 KELT------------------------------------VDNSFEFEKRRNEPVKYQRE 84
Query: 121 LAENTLKAIKKIDKIRVAREER 142
L T+ A+K++++I+ R+ +
Sbjct: 85 LWNKTIDAMKRVEEIKQKRQAK 106
>sp|Q9UHA3|RLP24_HUMAN Probable ribosome biogenesis protein RLP24 OS=Homo sapiens
GN=RSL24D1 PE=1 SV=1
Length = 163
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 87/142 (61%), Gaps = 36/142 (25%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+EKC+FCS +YPGHG+ FVRND K+FRFC+SKCHKNFK KRNPRKV+WTKA+R+ G
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++T D++FEFE++RN P +Y R
Sbjct: 61 KELT------------------------------------VDNSFEFEKRRNEPIKYQRE 84
Query: 121 LAENTLKAIKKIDKIRVAREER 142
L T+ A+K++++I+ R+ +
Sbjct: 85 LWNKTIDAMKRVEEIKQKRQAK 106
>sp|Q6P6G7|RLP24_RAT Probable ribosome biogenesis protein RLP24 OS=Rattus norvegicus
GN=Rsl24d1 PE=2 SV=1
Length = 163
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 86/140 (61%), Gaps = 36/140 (25%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+EKC+FCS +YPGHG+ FVRND K+FRFC+SKCHKNFK KRNPRKV+WTKA+R+ G
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++T D++FEFE++RN P +Y R
Sbjct: 61 KELT------------------------------------VDNSFEFEKRRNEPVKYQRE 84
Query: 121 LAENTLKAIKKIDKIRVARE 140
L T+ A+K++++I+ R+
Sbjct: 85 LWNKTIDAMKRVEEIKQRRQ 104
>sp|Q6FPU0|RLP24_CANGA Ribosome biogenesis protein RLP24 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RLP24 PE=3 SV=1
Length = 197
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 85/148 (57%), Gaps = 36/148 (24%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+ +C FCSS VYPGHGI FVRNDAK FRFCRSKCHKNFK +RNPRK+KWTKA+R+ G
Sbjct: 1 MRIYQCHFCSSPVYPGHGIMFVRNDAKEFRFCRSKCHKNFKQRRNPRKLKWTKAFRKAAG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++ DST F ++RN P RY+R
Sbjct: 61 KELA------------------------------------VDSTLTFAQRRNVPVRYNRE 84
Query: 121 LAENTLKAIKKIDKIRVAREERHHKLRF 148
L TLKA+ +I++IR RE +K R
Sbjct: 85 LVATTLKAMSRIEEIRQKRERAFYKNRM 112
>sp|Q7ZTZ2|RLP24_DANRE Probable ribosome biogenesis protein RLP24 OS=Danio rerio
GN=rsl24d1 PE=2 SV=1
Length = 161
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 87/142 (61%), Gaps = 36/142 (25%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+EKC+FCS+ VYPGHG+ FVRND K+FRFCRSKCHKNFK KRNPRK +WTKA+R+ G
Sbjct: 1 MRIEKCYFCSAPVYPGHGMMFVRNDCKVFRFCRSKCHKNFKKKRNPRKTRWTKAFRKSAG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++T D++ EFE++RN P +Y+R
Sbjct: 61 KELT------------------------------------VDNSLEFEKRRNTPVKYNRE 84
Query: 121 LAENTLKAIKKIDKIRVAREER 142
L T++A++K++ I+ R+ R
Sbjct: 85 LWSKTVEAMRKVESIKHKRQAR 106
>sp|Q5RF04|RLP24_PONAB Probable ribosome biogenesis protein RLP24 OS=Pongo abelii
GN=RSL24D1 PE=2 SV=1
Length = 163
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 87/142 (61%), Gaps = 36/142 (25%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+EKC+FCS +YPGHG+ FVRND K+FRFC+SKCHKNFK +RNPRKV+WTKA+R+ G
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKRRNPRKVRWTKAFRKAAG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++T D++FEFE++RN P +Y R
Sbjct: 61 KELT------------------------------------VDNSFEFEKRRNEPIKYQRE 84
Query: 121 LAENTLKAIKKIDKIRVAREER 142
L T+ A+K++++I+ R+ +
Sbjct: 85 LWNKTIDAMKRVEEIKQKRQAK 106
>sp|Q759D1|RLP24_ASHGO Ribosome biogenesis protein RLP24 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RLP24
PE=3 SV=1
Length = 197
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 84/148 (56%), Gaps = 36/148 (24%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+ C FCSS VYPGHGI FVRNDAK FRFCRSKCHK FK +RNPRK+KWTKA+R+ G
Sbjct: 1 MRIYSCHFCSSPVYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++ DST F ++RN P RY+R
Sbjct: 61 KELA------------------------------------VDSTLTFAQRRNVPVRYNRE 84
Query: 121 LAENTLKAIKKIDKIRVAREERHHKLRF 148
L E TLKA+ +I++IR RE +K R
Sbjct: 85 LVETTLKAMTRIEEIRQKRERAFYKNRM 112
>sp|Q6CF69|RLP24_YARLI Ribosome biogenesis protein RLP24 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RLP24 PE=3 SV=1
Length = 188
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 36/140 (25%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+ C FCSS VYPG GI FVRND+K FRFCRSKCHKNFKMKRNPRK++WTKA+R+ G
Sbjct: 1 MRVYNCHFCSSPVYPGKGIMFVRNDSKEFRFCRSKCHKNFKMKRNPRKLRWTKAFRKAAG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K+M DST F +R+ P RY+R+
Sbjct: 61 KEMV------------------------------------VDSTLAFSARRDVPVRYNRD 84
Query: 121 LAENTLKAIKKIDKIRVARE 140
L E TL+A++K+++IR+ RE
Sbjct: 85 LVEKTLEAMEKVEEIRLKRE 104
>sp|Q07915|RLP24_YEAST Ribosome biogenesis protein RLP24 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RLP24 PE=1 SV=1
Length = 199
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 80/140 (57%), Gaps = 36/140 (25%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+ +C FCSS YPGHGI FVRNDAK FRFCRSKCHK FK +RNPRK+KWTKA+R+ G
Sbjct: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++ DST F ++RN P RY+R
Sbjct: 61 KELA------------------------------------VDSTLTFAQRRNVPVRYNRE 84
Query: 121 LAENTLKAIKKIDKIRVARE 140
L TLKA+ +I++IR RE
Sbjct: 85 LVATTLKAMARIEEIRQKRE 104
>sp|Q9VGN9|RLP24_DROME Probable ribosome biogenesis protein RLP24 OS=Drosophila
melanogaster GN=RpL24-like PE=1 SV=1
Length = 191
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 80/139 (57%), Gaps = 36/139 (25%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR++ C+FCSS +YPGHG+QFVRND K+F+FCR KCHK FK K+NPRKV WTKAYR+ G
Sbjct: 1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRKAAG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++ D +FEFE++RN P +Y R
Sbjct: 61 KELA------------------------------------IDPSFEFEKRRNVPMKYSRE 84
Query: 121 LAENTLKAIKKIDKIRVAR 139
+ L+AIK++ +I+ R
Sbjct: 85 TWQKGLEAIKRVTEIKEKR 103
>sp|Q6CNW3|RLP24_KLULA Ribosome biogenesis protein RLP24 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=RLP24 PE=3 SV=1
Length = 198
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 82/148 (55%), Gaps = 36/148 (24%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+ C FCSS YPGHGI FVRNDAK FRFCRSKCHK FK +RNPRK++WTKA+R+ G
Sbjct: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++ DST F ++RN P RY+R
Sbjct: 61 KELA------------------------------------VDSTLTFAQRRNVPVRYNRE 84
Query: 121 LAENTLKAIKKIDKIRVAREERHHKLRF 148
L TLKA+ +I++IR RE +K R
Sbjct: 85 LVATTLKAMSRIEEIRQRRERAFYKNRM 112
>sp|Q6BH34|RLP24_DEBHA Ribosome biogenesis protein RLP24 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RLP24 PE=3 SV=1
Length = 203
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 80/148 (54%), Gaps = 36/148 (24%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+ C FCSS VYP HGI FVRNDAK FRFCRSKCH FK +RNPRK++WTKA+R+ G
Sbjct: 1 MRVYSCHFCSSPVYPLHGIMFVRNDAKEFRFCRSKCHHAFKQRRNPRKLRWTKAFRKAAG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++ DST F +RN P RY+R+
Sbjct: 61 KELV------------------------------------VDSTLTFAARRNVPVRYNRD 84
Query: 121 LAENTLKAIKKIDKIRVAREERHHKLRF 148
L TLK + ++++IR RE +K R
Sbjct: 85 LVATTLKTMARVEEIRQKRERAFYKNRM 112
>sp|Q17606|RLP24_CAEEL Probable ribosome biogenesis protein RLP24 OS=Caenorhabditis
elegans GN=rpl-24.2 PE=3 SV=1
Length = 162
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 36/139 (25%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+EKC+FCSS +YPGHGIQFVRND+ +F+FCRS+C+K FK K+NPRK+++TKA RR G
Sbjct: 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARRARG 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++ D+T E++R+ P +Y+R
Sbjct: 61 KELI------------------------------------NDATQLLEQRRDEPVKYERA 84
Query: 121 LAENTLKAIKKIDKIRVAR 139
+ + T++A K I ++ R
Sbjct: 85 MFQKTIEAAKTISALKTKR 103
>sp|Q8SSF6|RLP24_ENCCU Probable ribosome biogenesis protein RLP24 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPL24 PE=3 SV=1
Length = 155
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 75/141 (53%), Gaps = 36/141 (25%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
MR+EKCWFCSS +Y GHG +VRNDAK+FRFCR KC K F + NPRKVKWTK R++
Sbjct: 1 MRIEKCWFCSSNIYQGHGTIYVRNDAKVFRFCRPKCRKLFARRVNPRKVKWTKISRKMAN 60
Query: 61 KDMTQVNMFGFSILFCNLFYLNMFMRISGDLFFSFPFSYRQDSTFEFERKRNRPERYDRN 120
K++ CN D+ FE + N P YDR
Sbjct: 61 KEL------------CN------------------------DAILTFEHRLNEPRMYDRA 84
Query: 121 LAENTLKAIKKIDKIRVAREE 141
AE TL +I +I +IR RE+
Sbjct: 85 EAERTLSSIPRILEIRKRRED 105
>sp|P83732|RL24_RAT 60S ribosomal protein L24 OS=Rattus norvegicus GN=Rpl24 PE=1 SV=1
Length = 157
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E C F +YPGHG ++ R D K+F+F +KC F KRNPR++ WT YRR H
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 61 KDMTQ 65
K ++
Sbjct: 61 KGQSE 65
>sp|Q8BP67|RL24_MOUSE 60S ribosomal protein L24 OS=Mus musculus GN=Rpl24 PE=2 SV=2
Length = 157
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E C F +YPGHG ++ R D K+F+F +KC F KRNPR++ WT YRR H
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 61 KDMTQ 65
K ++
Sbjct: 61 KGQSE 65
>sp|P61122|RL24_MACFA 60S ribosomal protein L24 OS=Macaca fascicularis GN=RPL24 PE=2
SV=1
Length = 157
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E C F +YPGHG ++ R D K+F+F +KC F KRNPR++ WT YRR H
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 61 KDMTQ 65
K ++
Sbjct: 61 KGQSE 65
>sp|P83731|RL24_HUMAN 60S ribosomal protein L24 OS=Homo sapiens GN=RPL24 PE=1 SV=1
Length = 157
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E C F +YPGHG ++ R D K+F+F +KC F KRNPR++ WT YRR H
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 61 KDMTQ 65
K ++
Sbjct: 61 KGQSE 65
>sp|Q66WF5|RL24_FELCA 60S ribosomal protein L24 OS=Felis catus GN=RPL24 PE=2 SV=1
Length = 157
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E C F +YPGHG ++ R D K+F+F +KC F KRNPR++ WT YRR H
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 61 KDMTQ 65
K ++
Sbjct: 61 KGQSE 65
>sp|Q862I1|RL24_BOVIN 60S ribosomal protein L24 OS=Bos taurus GN=RPL24 PE=2 SV=2
Length = 157
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E C F +YPGHG ++ R D K+F+F +KC F KRNPR++ WT YRR H
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 61 KDMTQ 65
K ++
Sbjct: 61 KGQSE 65
>sp|Q6FXY9|RL24_CANGA 60S ribosomal protein L24 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL24
PE=3 SV=1
Length = 155
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E F + +YPG G FVR D+KIFRF SK FK ++NPR+V WT YRR H
Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRVAWTVLYRRHHK 60
Query: 61 KDMTQ 65
K +T+
Sbjct: 61 KGITE 65
>sp|Q8JGR4|RL24_DANRE 60S ribosomal protein L24 OS=Danio rerio GN=rpl24 PE=2 SV=1
Length = 157
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E C F +YPGHG ++ R D K+F+F +KC F KRNPR++ WT YRR H
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 61 KDMTQ 65
K ++
Sbjct: 61 KGQSE 65
>sp|Q6Y263|RL24_PAGMA 60S ribosomal protein L24 OS=Pagrus major GN=rpl24 PE=2 SV=1
Length = 157
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E C F +YPGHG ++ R D K+F+F +KC F KRNPR++ WT YRR H
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARIDGKVFQFLNAKCESAFLAKRNPRQINWTVLYRRKHK 60
Query: 61 KDMTQ 65
K ++
Sbjct: 61 KGQSE 65
>sp|Q90YU3|RL24_ICTPU 60S ribosomal protein L24 OS=Ictalurus punctatus GN=rpl24 PE=2
SV=1
Length = 157
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E C F +YPGHG + R D K+F+F +KC F KRNPR++ WT YRR H
Sbjct: 1 MKVELCSFSGYKIYPGHGPVYARIDGKVFQFLNAKCESAFLTKRNPRQINWTVLYRRKHK 60
Query: 61 KDMTQ 65
K ++
Sbjct: 61 KGQSE 65
>sp|Q9DFQ7|RL24_GILMI 60S ribosomal protein L24 OS=Gillichthys mirabilis GN=rpl24 PE=2
SV=2
Length = 157
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E C F +YPGHG ++ R D K+F+F +KC F KRNPR++ WT YRR H
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARIDGKVFQFLNAKCESAFLAKRNPRQINWTVLYRRKHK 60
Query: 61 KDMTQ 65
K ++
Sbjct: 61 KGQSE 65
>sp|Q8ISQ3|RL24_BRABE 60S ribosomal protein L24 OS=Branchiostoma belcheri GN=RPL24 PE=2
SV=1
Length = 154
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E C + +YPGHG ++ R D +++ F +KC +F MKRNPR++ WT YRR H
Sbjct: 1 MKIELCLYSGYKIYPGHGKRYARTDGRVYTFLNAKCEASFLMKRNPREITWTVLYRRKHK 60
Query: 61 KDMTQ 65
K +
Sbjct: 61 KGQQE 65
>sp|Q6C4U6|RL24_YARLI 60S ribosomal protein L24 OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=RPL24 PE=3 SV=1
Length = 155
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E F + +YPG G FVR D+KIFRF SK FK ++NPR++ WT YRR H
Sbjct: 1 MKIELDSFSGNKIYPGRGTLFVRGDSKIFRFYSSKTASLFKQRKNPRRIAWTVLYRRKHK 60
Query: 61 KDMTQ 65
K +T+
Sbjct: 61 KGITE 65
>sp|O74884|RL24B_SCHPO 60S ribosomal protein L24-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl24b PE=1 SV=1
Length = 149
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E C F S VYPG G FVR D K+FRF K F ++NPR++ WT YRR+H
Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHK 60
Query: 61 KDMTQ 65
K +++
Sbjct: 61 KGISE 65
>sp|Q92354|RL24A_SCHPO 60S ribosomal protein L24-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl24a PE=3 SV=1
Length = 149
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E C F S VYPG G FVR D K+FRF K F ++NPR++ WT YRR+H
Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHK 60
Query: 61 KDMTQ 65
K +++
Sbjct: 61 KGISE 65
>sp|P38665|RL24_KLULA 60S ribosomal protein L24 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=RPL24 PE=3 SV=1
Length = 155
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E F + +YPG G FVR D+KIFRF SK F ++NPR++ WT YRR H
Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
Query: 61 KDMTQ 65
K +T+
Sbjct: 61 KGITE 65
>sp|P38666|RL242_ARATH 60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B
PE=2 SV=2
Length = 163
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
++ E C F +YPG GI+F+R+D+++F F SKC + F K P K+ WT YR+ H
Sbjct: 3 LKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHK 62
Query: 61 KDMTQ 65
KD Q
Sbjct: 63 KDAAQ 67
>sp|P24000|RL24B_YEAST 60S ribosomal protein L24-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL24B PE=1 SV=1
Length = 155
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E F + +YPG G FVR D+KIFRF SK FK ++NPR++ WT +R+ H
Sbjct: 1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60
Query: 61 KDMTQ 65
K +T+
Sbjct: 61 KGITE 65
>sp|Q6BNC2|RL24_DEBHA 60S ribosomal protein L24 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RPL24 PE=3 SV=1
Length = 156
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E F + +YPG G FVR D+KIFRF SK F ++NPR++ WT YRR H
Sbjct: 1 MKVELDSFSGTKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRISWTVLYRRQHK 60
Query: 61 KDMTQ 65
K +++
Sbjct: 61 KGISE 65
>sp|P04449|RL24A_YEAST 60S ribosomal protein L24-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL24A PE=1 SV=1
Length = 155
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E F + +YPG G FVR D+KIFRF SK FK ++NPR++ WT +R+ H
Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60
Query: 61 KDMTQ 65
K +T+
Sbjct: 61 KGITE 65
>sp|Q752U6|RL24_ASHGO 60S ribosomal protein L24 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL24 PE=3
SV=1
Length = 155
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++E F + +YPG G FVR D+K+FRF SK F ++NPR++ WT YRR H
Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKVFRFHSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
Query: 61 KDMTQ 65
K +T+
Sbjct: 61 KGITE 65
>sp|Q9VJY6|RL24_DROME 60S ribosomal protein L24 OS=Drosophila melanogaster GN=RpL24
PE=1 SV=1
Length = 155
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
M++ C F +YPGHG V+ D K F F KC +++ MKRNPRKV WT YRR H
Sbjct: 1 MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHR 60
Query: 61 KDMTQ 65
K + +
Sbjct: 61 KGIEE 65
>sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1
Length = 186
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
++ E C F + +YPG GI+F+R+D+++F F SKC + F + P K+ WT YR+ H
Sbjct: 3 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHK 62
Query: 61 KDMTQ 65
KD+ Q
Sbjct: 63 KDIAQ 67
>sp|A6VJU5|RL24E_METM7 50S ribosomal protein L24e OS=Methanococcus maripaludis (strain
C7 / ATCC BAA-1331) GN=rpl24e PE=3 SV=1
Length = 62
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLH 59
M + C FC T+ PG G ++V+ D + FC SKC KNFK+ R RKVKWT ++R++
Sbjct: 1 MEWKTCSFCEGTIEPGCGKKYVKKDGSVMHFCSSKCEKNFKLGRVGRKVKWTNTFKRIN 59
>sp|Q42347|RL241_ARATH 60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A
PE=1 SV=2
Length = 164
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
++ E C F +YPG GI+F+R+D+++F F SKC + F K P K+ WT YR+ H
Sbjct: 3 LKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHK 62
Query: 61 KDMTQ 65
KD Q
Sbjct: 63 KDAAQ 67
>sp|P61123|RL24E_METMP 50S ribosomal protein L24e OS=Methanococcus maripaludis (strain
S2 / LL) GN=rpl24e PE=3 SV=1
Length = 62
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLH 59
M + C FC T+ PG G ++V+ D + FC SKC KNFK+ R RK+KWT ++R++
Sbjct: 1 MEWKTCSFCEGTIEPGCGKKYVKKDGSVMHFCSSKCEKNFKLGRVGRKLKWTNTFKRIN 59
>sp|A9A7E7|RL24E_METM6 50S ribosomal protein L24e OS=Methanococcus maripaludis (strain
C6 / ATCC BAA-1332) GN=rpl24e PE=3 SV=1
Length = 62
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLH 59
M + C FC T+ PG G ++V+ D + FC SKC KNFK+ R RK+KWT ++R++
Sbjct: 1 MEWKTCSFCEGTIEPGCGKKYVKKDGSVMHFCSSKCEKNFKLGRVGRKLKWTNTFKRIN 59
>sp|A4FYI7|RL24E_METM5 50S ribosomal protein L24e OS=Methanococcus maripaludis (strain
C5 / ATCC BAA-1333) GN=rpl24e PE=3 SV=1
Length = 62
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLH 59
M + C FC T+ PG G ++V+ D + FC SKC KNFK+ R RK+KWT ++R++
Sbjct: 1 MEWKTCSFCEGTIEPGCGKKYVKKDGSVMHFCSSKCEKNFKLGRVGRKLKWTNTFKRIN 59
>sp|O65743|RL24_CICAR 60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1
Length = 164
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60
++ E C F + +YPG GI+F+R D+++F F SKC + F + P K+ WT +R+ H
Sbjct: 3 LKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHK 62
Query: 61 KDMTQ 65
KD Q
Sbjct: 63 KDAAQ 67
>sp|P54064|RL24E_METJA 50S ribosomal protein L24e OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=rpl24e PE=3 SV=1
Length = 70
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 6 CWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGK 61
C FC + PG G V D + FC SKC K+++M RNPRK+KWTK Y+ + +
Sbjct: 7 CSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQDMKAE 62
>sp|A2BK96|RL24E_HYPBU 50S ribosomal protein L24e OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl24e PE=3 SV=1
Length = 61
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 3 LEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRL 58
+ C +C ++ PG G+ +V+ND + FC SKC K ++M R+PRK+KWT+ Y +L
Sbjct: 4 VHTCTYCGRSIEPGTGLMYVKNDGSVLWFCSSKCFKLWRMGRDPRKLKWTERYTQL 59
>sp|A6USH5|RL24E_METVS 50S ribosomal protein L24e OS=Methanococcus vannielii (strain SB
/ ATCC 35089 / DSM 1224) GN=rpl24e PE=3 SV=1
Length = 62
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLH 59
M + C FC + PG G ++V+ D + +FC SKC KNFK+ R RK+KWT ++R++
Sbjct: 1 MEWKTCSFCEGKIEPGCGKKYVKKDGSVMQFCSSKCEKNFKLGRVGRKLKWTNMFKRMN 59
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.334 0.144 0.465
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,696,008
Number of Sequences: 539616
Number of extensions: 2195901
Number of successful extensions: 8001
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7853
Number of HSP's gapped (non-prelim): 123
length of query: 168
length of database: 191,569,459
effective HSP length: 109
effective length of query: 59
effective length of database: 132,751,315
effective search space: 7832327585
effective search space used: 7832327585
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 57 (26.6 bits)