BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 030956
         (168 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9C6Z2|NUD25_ARATH Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1
          Length = 175

 Score =  267 bits (682), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 128/153 (83%), Positives = 140/153 (91%), Gaps = 2/153 (1%)

Query: 18  IFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPA 77
           +FVASRLNVPGAWQMPQGGIEDGEDPK AAMREL+EETG+VSAEI++EVPNWLTYDFPPA
Sbjct: 23  VFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEETGVVSAEIVSEVPNWLTYDFPPA 82

Query: 78  VKTKVNRLWGGEWHGQAQKWFLMKLTNDES--EINLANGEADPEFAEWKWASPEEVVEQA 135
           VK KVNRLWGGEWHGQAQKW+L++L NDE   EINLAN EAD EFAEWKWA PEEVVEQA
Sbjct: 83  VKAKVNRLWGGEWHGQAQKWYLVRLRNDEDEKEINLANNEADSEFAEWKWAKPEEVVEQA 142

Query: 136 VDYKRPTYEEVMRTFRPYLNENGIAAKCKSAKW 168
           VDYKRPTYEEV++TF  +LN+ G AAKCKSAKW
Sbjct: 143 VDYKRPTYEEVIKTFGSFLNDTGRAAKCKSAKW 175


>sp|Q9CAF2|NUD26_ARATH Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana GN=NUDT26
           PE=1 SV=1
          Length = 216

 Score =  189 bits (481), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 84/140 (60%), Positives = 109/140 (77%), Gaps = 1/140 (0%)

Query: 17  QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPP 76
           +IF ASRL++P AWQMPQGGI++GEDP++A MREL+EETG+ SAEI+AE P+W+TYDFPP
Sbjct: 77  KIFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWITYDFPP 136

Query: 77  AVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEIN-LANGEADPEFAEWKWASPEEVVEQA 135
            V+ K+   WG +W GQAQKWFL+K T  + EIN L +G   PEF EW W SP++VVE A
Sbjct: 137 DVREKLKVRWGSDWKGQAQKWFLLKFTGKDEEINLLGDGTEKPEFGEWSWTSPDQVVENA 196

Query: 136 VDYKRPTYEEVMRTFRPYLN 155
           V++K+P Y+EVM  F  +L 
Sbjct: 197 VEFKKPVYKEVMSAFASHLQ 216


>sp|Q9FNH4|NUD27_ARATH Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana GN=NUDT27
           PE=1 SV=1
          Length = 227

 Score =  181 bits (458), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 83/139 (59%), Positives = 101/139 (72%), Gaps = 1/139 (0%)

Query: 17  QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPP 76
           +IF AS++++P  WQMPQGG ++GED + AA RELREETG+ SAE IAE+PNWLTYDFP 
Sbjct: 76  KIFTASKIHIPDTWQMPQGGADEGEDLRNAAFRELREETGVTSAEFIAEIPNWLTYDFPR 135

Query: 77  AVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEIN-LANGEADPEFAEWKWASPEEVVEQA 135
            VK K+NR W   + GQAQKWFL K T  E EIN L +G A PEF  W W  PE+V+E A
Sbjct: 136 EVKDKLNRKWRTSYKGQAQKWFLFKFTGKEEEINLLGDGTAKPEFKVWSWMLPEQVIEHA 195

Query: 136 VDYKRPTYEEVMRTFRPYL 154
           V +KRP YE V++ F PY 
Sbjct: 196 VYFKRPVYEHVIKQFNPYF 214


>sp|A3PMX6|RPPH_RHOS1 RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC
           17029 / ATH 2.4.9) GN=rppH PE=3 SV=1
          Length = 162

 Score =  136 bits (342), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 70/155 (45%), Positives = 99/155 (63%), Gaps = 8/155 (5%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVS-- 59
           Y  C  + ++   G IF   R++ P  AWQMPQGGI++GE P+ AA+REL EETGI +  
Sbjct: 12  YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAER 71

Query: 60  AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPE 119
            E +A+ P+W+TYD PP +   + R+WGG++ GQ QKWFL +    + E+ +    A  E
Sbjct: 72  VEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDDEVGIGTDHA--E 126

Query: 120 FAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 154
           F+ W+W   EE+V   V +KR  YEEV+ TFRP+L
Sbjct: 127 FSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161


>sp|B9KN59|RPPH_RHOSK RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain KD131 /
           KCTC 12085) GN=rppH PE=3 SV=1
          Length = 162

 Score =  136 bits (342), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 70/155 (45%), Positives = 99/155 (63%), Gaps = 8/155 (5%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVS-- 59
           Y  C  + ++   G IF   R++ P  AWQMPQGGI++GE P+ AA+REL EETGI +  
Sbjct: 12  YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAER 71

Query: 60  AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPE 119
            E +A+ P+W+TYD PP +   + R+WGG++ GQ QKWFL +    + E+ +    A  E
Sbjct: 72  VEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDEEVGIGTDHA--E 126

Query: 120 FAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 154
           F+ W+W   EE+V   V +KR  YEEV+ TFRP+L
Sbjct: 127 FSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161


>sp|Q3IZC1|RPPH_RHOS4 RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC
           17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rppH PE=3 SV=1
          Length = 162

 Score =  136 bits (342), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 70/155 (45%), Positives = 99/155 (63%), Gaps = 8/155 (5%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVS-- 59
           Y  C  + ++   G IF   R++ P  AWQMPQGGI++GE P+ AA+REL EETGI +  
Sbjct: 12  YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAER 71

Query: 60  AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPE 119
            E +A+ P+W+TYD PP +   + R+WGG++ GQ QKWFL +    + E+ +    A  E
Sbjct: 72  VEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDEEVGIGTDHA--E 126

Query: 120 FAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 154
           F+ W+W   EE+V   V +KR  YEEV+ TFRP+L
Sbjct: 127 FSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161


>sp|A8LKJ8|RPPH_DINSH RNA pyrophosphohydrolase OS=Dinoroseobacter shibae (strain DFL 12)
           GN=rppH PE=3 SV=1
          Length = 160

 Score =  133 bits (335), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 68/156 (43%), Positives = 97/156 (62%), Gaps = 10/156 (6%)

Query: 3   YAECSVLSMLIYLGQIFVASRLN--VPGAWQMPQGGIEDGEDPKLAAMRELREETGIV-- 58
           Y +C  + +    G++F   R +  +P AWQMPQGGIEDGED + AA+REL EETG+   
Sbjct: 11  YRKCVGVVLWDGAGRVFTGQRYDSELP-AWQMPQGGIEDGEDARTAALRELVEETGVAVE 69

Query: 59  SAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADP 118
             E++AE P+W+ YD PP +   V R+W G + GQAQ+W LMK    +++IN+      P
Sbjct: 70  KVEVLAETPDWIKYDLPPEI---VPRIWKGRYKGQAQRWVLMKFLGSDADINIETKH--P 124

Query: 119 EFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 154
           EF+EW+W  P  V++  V +KR  YE+V   F  +L
Sbjct: 125 EFSEWRWLEPASVLDSIVPFKRDVYEQVFDAFSDWL 160


>sp|Q2RV14|RPPH_RHORT RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC
           11170 / NCIB 8255) GN=rppH PE=3 SV=1
          Length = 165

 Score =  133 bits (335), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/145 (45%), Positives = 91/145 (62%), Gaps = 5/145 (3%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI 62
           Y +   + ++   GQ+FVA RL+ P AWQMPQGGI+ GEDP+ AA RE+ EE G  +A +
Sbjct: 14  YRQGVGIMLINARGQVFVARRLDSPEAWQMPQGGIDAGEDPETAAWREMEEEIGTRNALL 73

Query: 63  IAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAE 122
           + E   WL YD P  ++    RLWGG + GQ QKWF  + T  +++INLA   A PEF  
Sbjct: 74  LGETAGWLGYDLPEELR---GRLWGGRFQGQRQKWFAFRFTGQDADINLAT--AHPEFDA 128

Query: 123 WKWASPEEVVEQAVDYKRPTYEEVM 147
           W+W   + +V   V +KRP YE+V+
Sbjct: 129 WRWVDVDTLVALIVPFKRPVYEQVV 153


>sp|A4WWV6|RPPH_RHOS5 RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC
           17025 / ATH 2.4.3) GN=rppH PE=3 SV=1
          Length = 162

 Score =  130 bits (328), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/156 (43%), Positives = 96/156 (61%), Gaps = 8/156 (5%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVS-- 59
           Y  C  + ++   G IF   R++ P  AWQMPQGGI+  E P+ AA+REL+EETGI    
Sbjct: 12  YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDADEKPRQAALRELQEETGIPEDL 71

Query: 60  AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPE 119
            E +A+ P W+TYD PP +   + R+WGG++ GQ QKWFL +    + +I +A   A  E
Sbjct: 72  VEFVAKAPEWVTYDLPPDL---LGRVWGGKYRGQRQKWFLFRYLGTDEQIGIATEHA--E 126

Query: 120 FAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 155
           F+ W+W   EE+V   V +KRP YE V+  FR +L+
Sbjct: 127 FSCWRWIGAEEMVASIVPFKRPVYERVVAMFREHLS 162


>sp|Q16BL5|RPPH_ROSDO RNA pyrophosphohydrolase OS=Roseobacter denitrificans (strain ATCC
           33942 / OCh 114) GN=rppH PE=3 SV=1
          Length = 160

 Score =  126 bits (317), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 95/155 (61%), Gaps = 8/155 (5%)

Query: 3   YAECSVLSMLIYLGQIFVASRL-NVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVS-- 59
           Y  C  + ++   G++FV  R  N   AWQMPQGG+E GEDP+ AA+REL EETG+    
Sbjct: 11  YRPCVGVMLMNGQGEVFVGQRRDNNVAAWQMPQGGVEKGEDPRAAALRELWEETGVNPEL 70

Query: 60  AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPE 119
           AE++AE  +WL YD P  +   V +LW G + GQ QKWFLM+    +S+IN+A     PE
Sbjct: 71  AEVVAETEDWLPYDLPYDL---VPKLWKGRYRGQEQKWFLMRFHGADSDINIAT--EHPE 125

Query: 120 FAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 154
           F++W+W    ++VE  V +KR  Y  V+  F  +L
Sbjct: 126 FSQWRWLPAADLVENIVPFKRDVYVAVLDAFEAHL 160


>sp|A1B502|RPPH_PARDP RNA pyrophosphohydrolase OS=Paracoccus denitrificans (strain Pd
           1222) GN=rppH PE=3 SV=1
          Length = 163

 Score =  126 bits (317), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 93/155 (60%), Gaps = 8/155 (5%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPG-AWQMPQGGIEDGEDPKLAAMRELREETGIVS-- 59
           Y  C+ + ++  +G +F   R++ PG AWQMPQGGI+ GE P+ AA+REL EETG+    
Sbjct: 13  YRPCAGVVLINPVGLVFAGQRIDNPGPAWQMPQGGIDRGESPREAALRELVEETGVTPDL 72

Query: 60  AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPE 119
            +++AE P W+TYD PP +  KV   W G + GQ QKWF M+   ++S + +A     PE
Sbjct: 73  VDVLAETPGWVTYDLPPELLGKV---WKGRYGGQKQKWFAMRFLGEDSAVRIAT--EHPE 127

Query: 120 FAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 154
           F  W+W    ++++  V +KR  Y  V+  FR  L
Sbjct: 128 FERWQWMRAADLIDGIVPFKRDVYARVLSDFREIL 162


>sp|A8HRT0|RPPH_AZOC5 RNA pyrophosphohydrolase OS=Azorhizobium caulinodans (strain ATCC
           43989 / DSM 5975 / ORS 571) GN=rppH PE=3 SV=1
          Length = 168

 Score =  126 bits (316), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 92/163 (56%), Gaps = 12/163 (7%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVP------GAWQMPQGGIEDGEDPKLAAMRELREETG 56
           Y  C  L++    GQ+F+  RL+ P       +WQMPQGGI+ GE+P  AA+REL EET 
Sbjct: 9   YRPCVGLAIFNRAGQVFLGQRLSGPEHVDATHSWQMPQGGIDKGEEPYEAALRELYEETS 68

Query: 57  IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINL---AN 113
           I S   + EV +WL+YD P  V  +    W G++ GQ QKWF ++ T DE EI++     
Sbjct: 69  IRSVVKLGEVEDWLSYDLPGRVAGEA---WKGKYRGQTQKWFALRFTGDEGEIDILKPGG 125

Query: 114 GEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 156
           G    EF  W+W + +   E  + +KR  YE V R FR + ++
Sbjct: 126 GAHKAEFCNWRWDALDRAAELVIPFKRQVYERVAREFRRFAHD 168


>sp|Q5LMH8|RPPH_RUEPO RNA pyrophosphohydrolase OS=Ruegeria pomeroyi (strain ATCC 700808 /
           DSM 15171 / DSS-3) GN=rppH PE=3 SV=1
          Length = 161

 Score =  123 bits (309), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 92/156 (58%), Gaps = 8/156 (5%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNV-PGAWQMPQGGIEDGEDPKLAAMRELREETGIVS-- 59
           Y  C  + ++   G +FV  R++    AWQMPQGG+++ EDP  AA+REL EETG+ +  
Sbjct: 11  YRPCVGVVLMNGDGFVFVGQRMDQNTDAWQMPQGGVDEDEDPFEAALRELWEETGVTADL 70

Query: 60  AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPE 119
            E++AE   WL YD P      V R+W G + GQ QKW+L +    + +I+L  G   PE
Sbjct: 71  VEMVAETDGWLPYDLP---HDLVPRIWKGRYRGQEQKWYLFRFLGRDDQIDLETGH--PE 125

Query: 120 FAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 155
           F+ WKW  P+ +V + V +KR  YE V+  F P+L 
Sbjct: 126 FSRWKWQDPDRLVAEIVPFKRDVYERVVAAFAPHLG 161


>sp|Q2N9Y3|RPPH_ERYLH RNA pyrophosphohydrolase OS=Erythrobacter litoralis (strain
           HTCC2594) GN=rppH PE=3 SV=1
          Length = 164

 Score =  123 bits (309), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 97/158 (61%), Gaps = 8/158 (5%)

Query: 1   MIYAECSVLSMLIYLGQIFVASRLNVP--GAWQMPQGGIEDGEDPKLAAMRELREETGIV 58
           + Y +C+ + +    G +F A R++    GAWQMPQGGI+ GE  + AAMREL EETG+ 
Sbjct: 11  LRYRQCAGVMLANREGLVFAAQRIDSKNLGAWQMPQGGIDPGETQQEAAMRELEEETGVS 70

Query: 59  S--AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEA 116
           +  A++IA +P  + YD P  ++ K   LWGG + GQ Q WFL + T  +++I++A    
Sbjct: 71  ADLADVIARMPYPVRYDLPEELQGK---LWGGRYRGQEQHWFLARFTGTDADIDIA-AHN 126

Query: 117 DPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 154
            PEF+EWKW  P+E+    V +KR  Y  V++ FR  +
Sbjct: 127 PPEFSEWKWVEPDELPRLIVPFKREVYRAVVKEFRSLI 164


>sp|Q3SVH3|RPPH_NITWN RNA pyrophosphohydrolase OS=Nitrobacter winogradskyi (strain Nb-255
           / ATCC 25391) GN=rppH PE=3 SV=1
          Length = 170

 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 90/155 (58%), Gaps = 10/155 (6%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPGA-----WQMPQGGIEDGEDPKLAAMRELREETGI 57
           Y  C  + ++   G +FV  R  V        WQMPQGG++ GED  LAA REL EET +
Sbjct: 9   YRTCVGMMLINERGLVFVGRRAGVEQVDDSYVWQMPQGGVDPGEDTWLAAKRELYEETSV 68

Query: 58  VSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLAN-GEA 116
            S E +AE+P+WLTYD P  V     R W G + GQ QKW+ ++   +++EIN+AN G+ 
Sbjct: 69  RSIEKLAEIPDWLTYDIPRVV---AGRAWKGRYRGQRQKWYAVRFIGEDNEINIANPGDG 125

Query: 117 D-PEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 150
             PEF  W+W   + +    + +KRP YE V++ F
Sbjct: 126 HKPEFTAWRWEPMQNLTGLIIPFKRPVYERVVKEF 160


>sp|A5FWY8|RPPH_ACICJ RNA pyrophosphohydrolase OS=Acidiphilium cryptum (strain JF-5)
           GN=rppH PE=3 SV=1
          Length = 164

 Score =  119 bits (299), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 9/153 (5%)

Query: 10  SMLIYLGQIFVASRLNV-PGA---WQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAE 65
           ++    G+I VA R ++ P A   WQ+PQGGI+  EDP  A +REL EE G  + E++ E
Sbjct: 16  ALFSRAGKILVARRADLGPDAAYQWQLPQGGIDGDEDPAAAVLRELDEEIGTTAVELLGE 75

Query: 66  VPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKW 125
           +P WL+YDFPP V  K    +G    GQ Q+WF ++    +  I L +  A PEF EW+W
Sbjct: 76  IPEWLSYDFPPDVVAK----FGARHRGQRQRWFALRFLGTDDMIRL-DAHAHPEFDEWRW 130

Query: 126 ASPEEVVEQAVDYKRPTYEEVMRTFRPYLNENG 158
                +   AV +KRP YE + R F  +   +G
Sbjct: 131 TELSSIPALAVPFKRPIYERLARDFARFAKTDG 163


>sp|Q5GT39|RPPH_WOLTR RNA pyrophosphohydrolase OS=Wolbachia sp. subsp. Brugia malayi
           (strain TRS) GN=rppH PE=3 SV=1
          Length = 161

 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 4/148 (2%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI 62
           Y  C  + +    G +F+  R +    WQMPQGGI+DGE  + AA+REL EE G   A+I
Sbjct: 8   YRPCVGIMLFNKQGHVFIGKRFDSDSYWQMPQGGIDDGEKLEQAALRELLEEVGTDKAKI 67

Query: 63  IAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAE 122
           IA+  +W+ Y+ P  V   +   W G + GQ Q+WFLMK   +  +IN+ N    PEF E
Sbjct: 68  IAKNKDWIYYNLPEEV---IPTCWNGRYSGQKQRWFLMKFYGEGKDINI-NYTDHPEFKE 123

Query: 123 WKWASPEEVVEQAVDYKRPTYEEVMRTF 150
           W+W S + +V  A+ +K+  Y+ V+  F
Sbjct: 124 WRWQSVDNLVAGAIPFKKEVYKTVIEEF 151


>sp|A8GMN4|RPPH_RICAH RNA pyrophosphohydrolase OS=Rickettsia akari (strain Hartford)
           GN=rppH PE=3 SV=1
          Length = 161

 Score =  118 bits (296), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 86/139 (61%), Gaps = 6/139 (4%)

Query: 17  QIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 75
            IFV  R++    AWQMPQGGI  GE P +AAMRE+ EE G     IIAE   W +YD P
Sbjct: 27  HIFVGKRIDTKLSAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGYIIAESKCWYSYDVP 86

Query: 76  PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA 135
             +   + +LW G + GQ Q+WFL++ T +  +IN+    ++PEF +W+WAS +E++   
Sbjct: 87  SLL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFDQWRWASLDELLSII 141

Query: 136 VDYKRPTYEEVMRTFRPYL 154
           + +KR  Y+ V++ F+  +
Sbjct: 142 IPFKRKLYQAVVKEFKSLI 160


>sp|Q13DN7|RPPH_RHOPS RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain
           BisB5) GN=rppH PE=3 SV=1
          Length = 167

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 88/155 (56%), Gaps = 10/155 (6%)

Query: 3   YAECSVLSMLIYLGQIFVASR------LNVPGAWQMPQGGIEDGEDPKLAAMRELREETG 56
           Y  C  + ++   G +F+  R      ++    WQMPQGG++ GED   AA REL EET 
Sbjct: 9   YRTCVGMMLINREGLVFIGRRAGGIEHVDDTHVWQMPQGGVDPGEDTWEAAKRELYEETN 68

Query: 57  IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINL-ANGE 115
           + S E I EVP+WL YD P   +T   R W G + GQ QKWF ++ T  +SEI++ A G 
Sbjct: 69  VRSVEKIGEVPDWLIYDIP---RTVAGRAWKGRYRGQRQKWFAVRFTGADSEIDVGAPGG 125

Query: 116 ADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 150
             PEF  W+W   + + +  V +KRP YE V++ F
Sbjct: 126 HKPEFTGWRWEPMQNLPDLIVPFKRPVYERVVKEF 160


>sp|Q68XD3|RPPH_RICTY RNA pyrophosphohydrolase OS=Rickettsia typhi (strain ATCC VR-144 /
           Wilmington) GN=rppH PE=3 SV=1
          Length = 161

 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 6/135 (4%)

Query: 17  QIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 75
           QIFV  R++    AWQMPQGGI  GE P +AAMRE+ EE G     IIAE   W +YD P
Sbjct: 27  QIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSNKGYIIAESKCWYSYDVP 86

Query: 76  PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA 135
             +   + +LW G + GQ Q+WFL++ T +  +IN+    ++PEF +W+W S +E++   
Sbjct: 87  SFL---IPKLWNGNFRGQKQRWFLIRFTGNNKDINIHT--SNPEFDQWRWTSLDELLSII 141

Query: 136 VDYKRPTYEEVMRTF 150
           + +KR  Y+ V++ F
Sbjct: 142 IPFKRKLYQAVVKEF 156


>sp|Q21CZ3|RPPH_RHOPB RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain
           BisB18) GN=rppH PE=3 SV=1
          Length = 175

 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 11/156 (7%)

Query: 3   YAECSVLSMLIYLGQIFVASRL------NVPGAWQMPQGGIEDGEDPKLAAMRELREETG 56
           Y  C  + +L   G +F+  RL      +    WQMPQGG++ GEDP  AA REL EET 
Sbjct: 9   YRTCVGMMLLNAEGLVFIGRRLGGIEHVDETHVWQMPQGGVDPGEDPWTAAKRELYEETS 68

Query: 57  IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLAN--G 114
           + S E + E+ +WL YD P   +T   R W G + GQ QKW+ ++ T D+SEI++ +  G
Sbjct: 69  VRSVEKLGEIADWLIYDIP---RTVAGRSWKGRYRGQRQKWYAVRFTGDDSEIDVVSPGG 125

Query: 115 EADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 150
               EF  W+W   + + +  V +KRP YE V++ F
Sbjct: 126 GHKAEFISWRWEPMQNLPDLIVPFKRPVYERVVKEF 161


>sp|B3CM46|RPPH_WOLPP RNA pyrophosphohydrolase OS=Wolbachia pipientis subsp. Culex
           pipiens (strain wPip) GN=rppH PE=3 SV=1
          Length = 162

 Score =  117 bits (292), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI 62
           Y  C  + +    G IF+  R +    WQMPQGG+++GE+ + AA+REL EE G   AE+
Sbjct: 8   YRPCVGIMLFNKQGNIFIGKRFDSDSYWQMPQGGVDEGEELEQAALRELLEEVGTDEAEV 67

Query: 63  IAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAE 122
           +A+   W+ Y+ P  V   +   W G + GQ Q+WFLMK    + +IN+ N    PEF E
Sbjct: 68  VAQNKEWIYYNLPEEV---IPICWNGRYSGQKQRWFLMKFCGKDKDINI-NYTDHPEFKE 123

Query: 123 WKWASPEEVVEQAVDYKRPTYEEVMRTF 150
           W+W + +++V  A+ +K+  Y++V+  F
Sbjct: 124 WRWQNVDDLVASAIPFKKEVYKKVIEEF 151


>sp|P61786|RPPH_RHOPA RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain ATCC
           BAA-98 / CGA009) GN=rppH PE=3 SV=1
          Length = 168

 Score =  117 bits (292), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 86/156 (55%), Gaps = 11/156 (7%)

Query: 3   YAECSVLSMLIYLGQIFVASR------LNVPGAWQMPQGGIEDGEDPKLAAMRELREETG 56
           Y  C  + ++   G +F+  R      ++    WQMPQGG++ GED   AA REL EET 
Sbjct: 9   YRTCVGVMLINREGLVFIGRRAGGIEHVDDTHVWQMPQGGVDPGEDTWKAAKRELYEETS 68

Query: 57  IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLAN--G 114
           + S E +AEVP+WL YD P   +T   R W G + GQ QKWF  + T  +SEIN+ +  G
Sbjct: 69  VNSVEKLAEVPDWLIYDIP---RTVAGRAWKGRYRGQRQKWFAARFTGADSEINVVHPGG 125

Query: 115 EADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 150
               EF  W+W     + E  V +KRP YE V++ F
Sbjct: 126 GHKAEFTSWRWEPMHNLPELIVPFKRPVYERVVKEF 161


>sp|A8GRA7|RPPH_RICRS RNA pyrophosphohydrolase OS=Rickettsia rickettsii (strain Sheila
           Smith) GN=rppH PE=3 SV=1
          Length = 161

 Score =  117 bits (292), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 6/135 (4%)

Query: 17  QIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 75
            IFV  R++    AWQMPQGGI  GE P +AAMRE+ EE G     IIAE   W +YD P
Sbjct: 27  HIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGYIIAESKCWYSYDVP 86

Query: 76  PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA 135
             +   + +LW G + GQ Q+WFL++ T +  +IN+    ++PEF +W+WAS +E++   
Sbjct: 87  SFL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFDQWRWASLDELLSII 141

Query: 136 VDYKRPTYEEVMRTF 150
           + +KR  Y+ V++ F
Sbjct: 142 IPFKRKLYQAVVKEF 156


>sp|B0BWQ7|RPPH_RICRO RNA pyrophosphohydrolase OS=Rickettsia rickettsii (strain Iowa)
           GN=rppH PE=3 SV=1
          Length = 161

 Score =  117 bits (292), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 6/135 (4%)

Query: 17  QIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 75
            IFV  R++    AWQMPQGGI  GE P +AAMRE+ EE G     IIAE   W +YD P
Sbjct: 27  HIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGYIIAESKCWYSYDVP 86

Query: 76  PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA 135
             +   + +LW G + GQ Q+WFL++ T +  +IN+    ++PEF +W+WAS +E++   
Sbjct: 87  SFL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFDQWRWASLDELLSII 141

Query: 136 VDYKRPTYEEVMRTF 150
           + +KR  Y+ V++ F
Sbjct: 142 IPFKRKLYQAVVKEF 156


>sp|Q4UKM5|RPPH_RICFE RNA pyrophosphohydrolase OS=Rickettsia felis (strain ATCC VR-1525 /
           URRWXCal2) GN=rppH PE=3 SV=1
          Length = 161

 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 6/135 (4%)

Query: 17  QIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 75
            IFV  R++    AWQMPQGGI  GE P +AAMRE+ EE G     IIAE   W +YD P
Sbjct: 27  HIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGYIIAESKCWYSYDVP 86

Query: 76  PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA 135
             +   + +LW G + GQ Q+WFL++ T +  +IN+    ++PEF +W+WAS +E++   
Sbjct: 87  SFL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFDQWRWASLDELLSII 141

Query: 136 VDYKRPTYEEVMRTF 150
           + +KR  Y+ V++ F
Sbjct: 142 IPFKRKLYQAVVKEF 156


>sp|Q92IV0|RPPH_RICCN RNA pyrophosphohydrolase OS=Rickettsia conorii (strain ATCC VR-613
           / Malish 7) GN=rppH PE=3 SV=1
          Length = 161

 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 6/135 (4%)

Query: 17  QIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 75
            IFV  R++    AWQMPQGGI  GE P +AAMRE+ EE G     IIAE   W +YD P
Sbjct: 27  HIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGYIIAESKFWYSYDVP 86

Query: 76  PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA 135
             +   + +LW G + GQ Q+WFL++ T +  +IN+    ++PEF +W+WAS +E++   
Sbjct: 87  SFL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFDQWRWASLDELLSII 141

Query: 136 VDYKRPTYEEVMRTF 150
           + +KR  Y+ V++ F
Sbjct: 142 IPFKRKLYQAVVKEF 156


>sp|A8EXY5|RPPH_RICCK RNA pyrophosphohydrolase OS=Rickettsia canadensis (strain McKiel)
           GN=rppH PE=3 SV=1
          Length = 161

 Score =  116 bits (291), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 6/135 (4%)

Query: 17  QIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 75
            IFV  R++    AWQMPQGGI  GE P +AAMRE+ EE G     IIAE   W +YD P
Sbjct: 27  HIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGYIIAESKCWYSYDLP 86

Query: 76  PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA 135
             +   + +LW G + GQ Q+WFL++ T +  +IN+    ++PEF +W+WAS  E++   
Sbjct: 87  SFL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFDQWRWASLNELLSII 141

Query: 136 VDYKRPTYEEVMRTF 150
           + +KR  Y+ V++ F
Sbjct: 142 IPFKRKLYQAVVKEF 156


>sp|Q9ZDT9|RPPH_RICPR RNA pyrophosphohydrolase OS=Rickettsia prowazekii (strain Madrid E)
           GN=rppH PE=1 SV=1
          Length = 161

 Score =  116 bits (291), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 84/135 (62%), Gaps = 6/135 (4%)

Query: 17  QIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 75
           QIFV  R++    +WQMPQGGI  GE P +AAMRE+ EE G     IIAE   W +YD P
Sbjct: 27  QIFVGKRIDTKISSWQMPQGGIVPGETPSIAAMREMLEEIGSNKGYIIAESKCWYSYDVP 86

Query: 76  PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA 135
             +   + +LW G + GQ Q+WFL++ T +  +IN+    ++PEF +W+W S +E++   
Sbjct: 87  SFL---IPKLWNGNFRGQKQRWFLIRFTGNNKDINIHT--SNPEFDQWRWTSLDELLSII 141

Query: 136 VDYKRPTYEEVMRTF 150
           + +KR  Y+ V++ F
Sbjct: 142 IPFKRKLYQAVVKEF 156


>sp|C4K0V5|RPPH_RICPU RNA pyrophosphohydrolase OS=Rickettsia peacockii (strain Rustic)
           GN=rppH PE=3 SV=1
          Length = 161

 Score =  116 bits (291), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 6/135 (4%)

Query: 17  QIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 75
            IFV  R++    AWQMPQGGI  GE P +AAMRE+ EE G     IIAE   W +YD P
Sbjct: 27  HIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGYIIAESKFWYSYDVP 86

Query: 76  PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA 135
             +   + +LW G + GQ Q+WFL++ T +  +IN+    ++PEF +W+WAS +E++   
Sbjct: 87  SFL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFDQWRWASLDELLSII 141

Query: 136 VDYKRPTYEEVMRTF 150
           + +KR  Y+ V++ F
Sbjct: 142 IPFKRKLYQAVVKEF 156


>sp|C0R4X8|RPPH_WOLWR RNA pyrophosphohydrolase OS=Wolbachia sp. subsp. Drosophila
           simulans (strain wRi) GN=rppH PE=3 SV=1
          Length = 162

 Score =  116 bits (291), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 89/159 (55%), Gaps = 4/159 (2%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI 62
           Y  C  + +    G  F+  R +    WQMPQGG++DGE+ + AA+REL EE G    ++
Sbjct: 8   YRPCVGIMLFNRQGHAFIGKRFDSDSYWQMPQGGVDDGEELEQAALRELLEEVGTNKVKV 67

Query: 63  IAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAE 122
           I +  +W+ Y+ P  V   +   W G++ GQ Q+WFLMK   ++ +I++ N    PEF E
Sbjct: 68  ITKSKDWIYYNLPEEV---IPICWNGKYSGQKQRWFLMKFCGEDEDIDI-NYTGHPEFKE 123

Query: 123 WKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNENGIAA 161
           W+W   + +V  A+ +K+  Y+ V+  F   +  + I++
Sbjct: 124 WRWQGIDSLVASAISFKKEVYKTVIEEFSSIIKASTISS 162


>sp|Q1RHV9|RPPH_RICBR RNA pyrophosphohydrolase OS=Rickettsia bellii (strain RML369-C)
           GN=rppH PE=3 SV=1
          Length = 161

 Score =  116 bits (291), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 83/135 (61%), Gaps = 6/135 (4%)

Query: 17  QIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 75
           +IFV  R++    AWQMPQGGI  GE P +AAMRE+ EE G     IIAE   W +YD P
Sbjct: 27  KIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSSKGYIIAESKCWYSYDVP 86

Query: 76  PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA 135
             +   + +LW G + GQ Q+WFL++ T    +IN+     +PEF EW+WAS +E++   
Sbjct: 87  SFL---IPKLWDGNFRGQKQRWFLIRFTGTNEDINI--NTLNPEFDEWRWASLDELLSII 141

Query: 136 VDYKRPTYEEVMRTF 150
           + +KR  Y+ V++ F
Sbjct: 142 IPFKRKLYQAVVKEF 156


>sp|A8GW83|RPPH_RICB8 RNA pyrophosphohydrolase OS=Rickettsia bellii (strain OSU 85-389)
           GN=rppH PE=3 SV=1
          Length = 161

 Score =  116 bits (291), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 83/135 (61%), Gaps = 6/135 (4%)

Query: 17  QIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 75
           +IFV  R++    AWQMPQGGI  GE P +AAMRE+ EE G     IIAE   W +YD P
Sbjct: 27  KIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSSKGYIIAESKCWYSYDVP 86

Query: 76  PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA 135
             +   + +LW G + GQ Q+WFL++ T    +IN+     +PEF EW+WAS +E++   
Sbjct: 87  SFL---IPKLWDGNFRGQKQRWFLIRFTGTNEDINI--NTLNPEFDEWRWASLDELLSII 141

Query: 136 VDYKRPTYEEVMRTF 150
           + +KR  Y+ V++ F
Sbjct: 142 IPFKRKLYQAVVKEF 156


>sp|C3PMT3|RPPH_RICAE RNA pyrophosphohydrolase OS=Rickettsia africae (strain ESF-5)
           GN=rppH PE=3 SV=1
          Length = 161

 Score =  116 bits (290), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 6/135 (4%)

Query: 17  QIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 75
            IFV  R++    AWQMPQGGI  GE P +AAMRE+ EE G     IIAE   W +YD P
Sbjct: 27  HIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGYIIAESKFWYSYDVP 86

Query: 76  PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA 135
             +   + +LW G + GQ Q+WFL++ T +  +IN+    ++PEF +W+WAS +E++   
Sbjct: 87  SFL---IPKLWNGNFRGQQQRWFLIRFTGNNEDINI--NTSNPEFDQWRWASLDELLSII 141

Query: 136 VDYKRPTYEEVMRTF 150
           + +KR  Y+ V++ F
Sbjct: 142 IPFKRKLYQAVVKEF 156


>sp|Q89X78|RPPH_BRAJA RNA pyrophosphohydrolase OS=Bradyrhizobium japonicum (strain USDA
           110) GN=rppH PE=3 SV=1
          Length = 167

 Score =  115 bits (289), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 86/156 (55%), Gaps = 11/156 (7%)

Query: 3   YAECSVLSMLIYLGQIFVASR------LNVPGAWQMPQGGIEDGEDPKLAAMRELREETG 56
           Y  C  + ++   G +F+  R      ++    WQMPQGG++ GED   AA REL EET 
Sbjct: 9   YRTCVGVMLINAKGLVFIGRRAGGIEHIDDTHVWQMPQGGVDPGEDTWAAAKRELYEETS 68

Query: 57  IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLAN--G 114
           + S E + EVP+WL YD P   +T   R W G + GQ QKWF ++ T  +SEIN+ N  G
Sbjct: 69  VRSVERLGEVPDWLIYDIP---RTVAGRAWKGRYRGQRQKWFAVRFTGKDSEINVENPGG 125

Query: 115 EADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 150
               EF  W+W   + +    + +KRP YE V++ F
Sbjct: 126 GHKAEFVSWRWEPMKNLPGLIIPFKRPVYERVVKEF 161


>sp|P61787|RPPH_WOLPM RNA pyrophosphohydrolase OS=Wolbachia pipientis wMel GN=rppH PE=3
           SV=1
          Length = 162

 Score =  115 bits (288), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 4/159 (2%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI 62
           Y  C  + +    G  F+  R      WQMPQGG++DGE+ + AA+REL EE G    ++
Sbjct: 8   YRPCVGIMLFNRQGHAFIGKRFESDSYWQMPQGGVDDGEELEQAALRELLEEVGTNKVKV 67

Query: 63  IAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAE 122
           I +  +W+ Y+ P  V   +   W G++ GQ Q+WFLMK   ++ +I++ N    PEF E
Sbjct: 68  ITKSKDWIYYNLPEEV---IPICWNGKYSGQKQRWFLMKFCGEDEDIDI-NYTGHPEFKE 123

Query: 123 WKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNENGIAA 161
           W+W   + +V  A+ +K+  Y+ V+  F   +  + I++
Sbjct: 124 WRWQGIDSLVASAISFKKEVYKTVIEEFSSIIKASTISS 162


>sp|A6Q441|RPPH_NITSB RNA pyrophosphohydrolase OS=Nitratiruptor sp. (strain SB155-2)
           GN=rppH PE=3 SV=1
          Length = 155

 Score =  115 bits (287), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 86/135 (63%), Gaps = 8/135 (5%)

Query: 17  QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPP 76
           + F+A+R +VP +WQ PQGGI+ GE PK A +REL+EE G    EIIAE P W++YDFP 
Sbjct: 24  EFFIAARSDVPDSWQFPQGGIDKGESPKEALLRELKEEIGTDKIEIIAEFPEWVSYDFPK 83

Query: 77  AVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAV 136
            +  K+       + GQ QK+FL+KL   E++I+L   E  PEF ++K+   +++     
Sbjct: 84  KIAKKMY-----PYDGQTQKYFLVKL-KPEAKIDLDTKE--PEFNDYKFVPYKDLFHYVT 135

Query: 137 DYKRPTYEEVMRTFR 151
            +KRP Y++V+  F+
Sbjct: 136 FFKRPVYKKVLEYFK 150


>sp|A9H3A6|RPPH_GLUDA RNA pyrophosphohydrolase OS=Gluconacetobacter diazotrophicus
           (strain ATCC 49037 / DSM 5601 / PAl5) GN=rppH PE=3 SV=1
          Length = 167

 Score =  114 bits (285), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 12/143 (8%)

Query: 16  GQIFVASRLNVPGA--------WQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVP 67
           G+I +  R + PGA        WQ PQGGI+  EDP+ A +RELREE G   A I+   P
Sbjct: 22  GRILIGRRTDQPGAGGPLDGGVWQCPQGGIDADEDPEEAVLRELREEIGTDRAVIMGARP 81

Query: 68  NWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWAS 127
           +WLTYD P A+   + R  GG + GQ QKWF ++ T  +S+I L + +  PEF  W+W  
Sbjct: 82  DWLTYDLPAAL---IGRALGGRYRGQTQKWFALRFTGQDSDIRLDD-QQPPEFDAWQWID 137

Query: 128 PEEVVEQAVDYKRPTYEEVMRTF 150
              + E+ V +KR  Y  ++R F
Sbjct: 138 LPSLPERNVGFKRDIYRTLVRDF 160


>sp|Q8FYM9|RPPH_BRUSU RNA pyrophosphohydrolase OS=Brucella suis biovar 1 (strain 1330)
           GN=rppH PE=3 SV=2
          Length = 178

 Score =  114 bits (285), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 13/159 (8%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPG--------AWQMPQGGIEDGEDPKLAAMRELREE 54
           Y  C  L +L   G ++   R+ +PG         WQMPQGGI+ GEDP  AA+REL EE
Sbjct: 19  YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEE 78

Query: 55  TGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE--INLA 112
           TG+ S  ++ E  +W+ YD PP +   V     G++ GQ QKWF  +   DESE  IN  
Sbjct: 79  TGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESEIAINPP 135

Query: 113 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 151
            G    EF  W+W    ++    V +KR  YE+V+ TFR
Sbjct: 136 PGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFR 174


>sp|A9WWW1|RPPH_BRUSI RNA pyrophosphohydrolase OS=Brucella suis (strain ATCC 23445 / NCTC
           10510) GN=rppH PE=3 SV=1
          Length = 178

 Score =  114 bits (285), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 13/159 (8%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPG--------AWQMPQGGIEDGEDPKLAAMRELREE 54
           Y  C  L +L   G ++   R+ +PG         WQMPQGGI+ GEDP  AA+REL EE
Sbjct: 19  YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEE 78

Query: 55  TGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE--INLA 112
           TG+ S  ++ E  +W+ YD PP +   V     G++ GQ QKWF  +   DESE  IN  
Sbjct: 79  TGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESEIAINPP 135

Query: 113 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 151
            G    EF  W+W    ++    V +KR  YE+V+ TFR
Sbjct: 136 PGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFR 174


>sp|A5VSH6|RPPH_BRUO2 RNA pyrophosphohydrolase OS=Brucella ovis (strain ATCC 25840 /
           63/290 / NCTC 10512) GN=rppH PE=3 SV=1
          Length = 178

 Score =  114 bits (285), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 13/159 (8%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPG--------AWQMPQGGIEDGEDPKLAAMRELREE 54
           Y  C  L +L   G ++   R+ +PG         WQMPQGGI+ GEDP  AA+REL EE
Sbjct: 19  YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEE 78

Query: 55  TGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE--INLA 112
           TG+ S  ++ E  +W+ YD PP +   V     G++ GQ QKWF  +   DESE  IN  
Sbjct: 79  TGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESEIAINPP 135

Query: 113 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 151
            G    EF  W+W    ++    V +KR  YE+V+ TFR
Sbjct: 136 PGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFR 174


>sp|A9M874|RPPH_BRUC2 RNA pyrophosphohydrolase OS=Brucella canis (strain ATCC 23365 /
           NCTC 10854) GN=rppH PE=3 SV=1
          Length = 178

 Score =  114 bits (285), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 13/159 (8%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPG--------AWQMPQGGIEDGEDPKLAAMRELREE 54
           Y  C  L +L   G ++   R+ +PG         WQMPQGGI+ GEDP  AA+REL EE
Sbjct: 19  YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEE 78

Query: 55  TGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE--INLA 112
           TG+ S  ++ E  +W+ YD PP +   V     G++ GQ QKWF  +   DESE  IN  
Sbjct: 79  TGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESEIAINPP 135

Query: 113 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 151
            G    EF  W+W    ++    V +KR  YE+V+ TFR
Sbjct: 136 PGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFR 174


>sp|Q2G7H8|RPPH_NOVAD RNA pyrophosphohydrolase OS=Novosphingobium aromaticivorans (strain
           DSM 12444) GN=rppH PE=3 SV=1
          Length = 161

 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 93/156 (59%), Gaps = 8/156 (5%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPG--AWQMPQGGIEDGEDPKLAAMRELREETGIVS- 59
           Y  C  + ++   G++FV  R++     AWQMPQGGI+DGE+   AA+REL EETG+ + 
Sbjct: 10  YRPCVGVMLVNSQGRVFVGRRIDDKDGVAWQMPQGGIDDGEELHPAALRELSEETGVAAE 69

Query: 60  -AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADP 118
              IIAE      YD P  +   + +LWGG++ GQ QKW L++   ++++I L +     
Sbjct: 70  LVTIIAESREEHLYDLPDEL---IGKLWGGQYRGQRQKWLLLRFAGEDTDIRL-DAHDPA 125

Query: 119 EFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 154
           EF+EW+W  PE++ +  V +KR  Y +V+  FR  +
Sbjct: 126 EFSEWRWVEPEQLPDLIVPFKRRVYRQVVDEFRDLI 161


>sp|Q2J3I9|RPPH_RHOP2 RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain
           HaA2) GN=rppH PE=3 SV=1
          Length = 167

 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 86/155 (55%), Gaps = 10/155 (6%)

Query: 3   YAECSVLSMLIYLGQIFVASR------LNVPGAWQMPQGGIEDGEDPKLAAMRELREETG 56
           Y  C  + ++   G +F+  R      ++    WQMPQGG++ GED   AA REL EET 
Sbjct: 9   YRTCVGMMLINRAGLVFIGRRAGGIEHVDDTHVWQMPQGGVDPGEDTWEAAKRELYEETN 68

Query: 57  IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEIN-LANGE 115
           + S E IAEVP+WL YD P   +T   R W G + GQ QKWF ++ T  +SEI+ +A   
Sbjct: 69  VRSVEKIAEVPDWLIYDIP---RTVAGRAWKGRYRGQRQKWFAIRFTGQDSEIDIIAPPG 125

Query: 116 ADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 150
              EF  W+W     + +  V +KRP YE V++ F
Sbjct: 126 HKSEFTSWRWEPMLNLPDLIVPFKRPVYERVVKEF 160


>sp|Q8YJ71|RPPH_BRUME RNA pyrophosphohydrolase OS=Brucella melitensis biotype 1 (strain
           16M / ATCC 23456 / NCTC 10094) GN=rppH PE=3 SV=1
          Length = 178

 Score =  114 bits (284), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 13/159 (8%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPG--------AWQMPQGGIEDGEDPKLAAMRELREE 54
           Y  C  L +L   G ++   R+ +PG         WQMPQGGI+ GEDP  AA+REL EE
Sbjct: 19  YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEE 78

Query: 55  TGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE--INLA 112
           TG+ S  ++ E  +W+ YD PP +   V     G++ GQ QKWF  +   DESE  IN  
Sbjct: 79  TGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESEIAINPP 135

Query: 113 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 151
            G    EF  W+W    ++    V +KR  YE+V+ TFR
Sbjct: 136 PGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFR 174


>sp|C0RF85|RPPH_BRUMB RNA pyrophosphohydrolase OS=Brucella melitensis biotype 2 (strain
           ATCC 23457) GN=rppH PE=3 SV=1
          Length = 178

 Score =  114 bits (284), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 13/159 (8%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPG--------AWQMPQGGIEDGEDPKLAAMRELREE 54
           Y  C  L +L   G ++   R+ +PG         WQMPQGGI+ GEDP  AA+REL EE
Sbjct: 19  YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEE 78

Query: 55  TGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE--INLA 112
           TG+ S  ++ E  +W+ YD PP +   V     G++ GQ QKWF  +   DESE  IN  
Sbjct: 79  TGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESEIAINPP 135

Query: 113 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 151
            G    EF  W+W    ++    V +KR  YE+V+ TFR
Sbjct: 136 PGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFR 174


>sp|B6JD11|RPPH_OLICO RNA pyrophosphohydrolase OS=Oligotropha carboxidovorans (strain
           ATCC 49405 / DSM 1227 / OM5) GN=rppH PE=3 SV=1
          Length = 166

 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 87/161 (54%), Gaps = 10/161 (6%)

Query: 3   YAECSVLSMLIYLGQIFVASR------LNVPGAWQMPQGGIEDGEDPKLAAMRELREETG 56
           Y  C  + +L   G +F+  R      ++    WQMPQGGI+ GED   AA REL EET 
Sbjct: 9   YRSCVGMMLLNPKGLVFIGRRVGGTELIDPAHVWQMPQGGIDPGEDYWEAAQRELLEETN 68

Query: 57  IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEA 116
             S E +AE  +W TYD P  +     R W G + GQ QKWF ++ T D+SEIN+A+   
Sbjct: 69  ARSIEKLAEATDWFTYDIPRMI---AGRSWKGRYRGQRQKWFAIRFTGDDSEINVASPAG 125

Query: 117 D-PEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 156
              EF +W+W   + +    V +KRP YE V++ F  +  E
Sbjct: 126 HKAEFVDWRWEPMQNLPNLVVPFKRPVYERVVKEFSRFAGE 166


>sp|A4YKE4|RPPH_BRASO RNA pyrophosphohydrolase OS=Bradyrhizobium sp. (strain ORS278)
           GN=rppH PE=3 SV=1
          Length = 168

 Score =  113 bits (283), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 86/157 (54%), Gaps = 12/157 (7%)

Query: 3   YAECSVLSMLIYLGQIFVASR------LNVPGAWQMPQGGIEDGEDPKLAAMRELREETG 56
           Y  C  ++++   G +F+  R      ++    WQMPQGG++ GED   AA REL EET 
Sbjct: 9   YRTCVGIALINSEGLVFIGRRAGGIEHVDDTHVWQMPQGGVDPGEDAWEAAKRELYEETS 68

Query: 57  IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINL---AN 113
           + S E +AE+ +WLTYD P   +T   R W G + GQ QKWF ++ T  +SEI++     
Sbjct: 69  VRSVEKLAEIDDWLTYDIP---RTVAGRAWKGRYRGQRQKWFALRFTGKDSEIDVEHPGG 125

Query: 114 GEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 150
           G    EF  W+W   + +    V +KRP YE V + F
Sbjct: 126 GHHKAEFITWRWEPLQNLPTLIVPFKRPVYERVAKEF 162


>sp|Q5FU29|RPPH_GLUOX RNA pyrophosphohydrolase OS=Gluconobacter oxydans (strain 621H)
           GN=rppH PE=3 SV=1
          Length = 170

 Score =  113 bits (282), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 86/133 (64%), Gaps = 5/133 (3%)

Query: 16  GQIFVASRLNVPG-AWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDF 74
           G++F+A R ++PG  WQ PQGGI++GE P++AA+RE+ EE G  +A I+AE   WL+YD 
Sbjct: 22  GKLFIARRTDLPGDVWQCPQGGIDEGETPQVAALREMGEEIGTQNARILAERSGWLSYDL 81

Query: 75  PPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQ 134
           P  +   + +  GG + GQ QKWF+M     +S+I L + +  PEF  W+W  P+ V+ +
Sbjct: 82  PSDL---IGKALGGRFRGQTQKWFVMGYEGQDSDIRL-DLQDPPEFDAWEWVDPQAVLNR 137

Query: 135 AVDYKRPTYEEVM 147
            + +K+  Y E++
Sbjct: 138 NLGFKKALYAELI 150


>sp|Q57B54|RPPH_BRUAB RNA pyrophosphohydrolase OS=Brucella abortus biovar 1 (strain
           9-941) GN=rppH PE=3 SV=1
          Length = 178

 Score =  112 bits (281), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 86/159 (54%), Gaps = 13/159 (8%)

Query: 3   YAECSVLSMLIYLGQIFVASRLNVPG--------AWQMPQGGIEDGEDPKLAAMRELREE 54
           Y  C  L +L   G ++   R+ +PG         WQMPQGGI+ GEDP  AA+REL EE
Sbjct: 19  YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEE 78

Query: 55  TGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE--INLA 112
           TG+ S  ++ E  +W+ YD PP +     +   G++ GQ QKWF  +   DESE  IN  
Sbjct: 79  TGMTSVSLLEEASDWINYDLPPHLMGLALK---GKYRGQTQKWFAYRFEGDESEIAINPP 135

Query: 113 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 151
            G    EF  W+W    ++    V +KR  YE+V+ TFR
Sbjct: 136 PGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFR 174


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.133    0.421 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,539,420
Number of Sequences: 539616
Number of extensions: 2707178
Number of successful extensions: 8183
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 7014
Number of HSP's gapped (non-prelim): 486
length of query: 168
length of database: 191,569,459
effective HSP length: 109
effective length of query: 59
effective length of database: 132,751,315
effective search space: 7832327585
effective search space used: 7832327585
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)