Query 030956
Match_columns 168
No_of_seqs 103 out of 1242
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 11:00:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030956.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030956hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f3y_A Diadenosine 5',5'''-P1, 99.9 5.2E-26 1.8E-30 158.8 14.2 151 3-153 13-164 (165)
2 3i7u_A AP4A hydrolase; nudix p 99.9 5.8E-25 2E-29 149.4 13.5 127 4-154 3-129 (134)
3 3u53_A BIS(5'-nucleosyl)-tetra 99.9 6E-25 2E-29 152.6 9.8 122 15-156 23-144 (155)
4 2kdv_A RNA pyrophosphohydrolas 99.9 1.2E-21 4.2E-26 137.2 15.1 149 3-156 7-157 (164)
5 1ktg_A Diadenosine tetraphosph 99.9 2.8E-21 9.6E-26 131.0 14.1 118 15-155 17-136 (138)
6 2pbt_A AP4A hydrolase; nudix p 99.9 5E-21 1.7E-25 129.1 13.4 125 7-155 6-130 (134)
7 3son_A Hypothetical nudix hydr 99.9 6.1E-21 2.1E-25 131.2 13.3 122 14-157 18-144 (149)
8 1vcd_A NDX1; nudix protein, di 99.9 1.8E-20 6.1E-25 125.2 14.0 120 7-154 4-124 (126)
9 3grn_A MUTT related protein; s 99.9 2.1E-20 7E-25 129.1 14.3 123 4-152 8-135 (153)
10 3gwy_A Putative CTP pyrophosph 99.9 1.2E-20 4E-25 128.6 12.7 120 7-153 8-132 (140)
11 3shd_A Phosphatase NUDJ; nudix 99.9 2.7E-20 9.1E-25 128.4 14.3 111 1-131 1-112 (153)
12 3fcm_A Hydrolase, nudix family 99.8 3E-20 1E-24 133.7 13.4 141 4-160 45-190 (197)
13 3gg6_A Nudix motif 18, nucleos 99.8 6.8E-21 2.3E-25 131.9 9.4 125 8-157 24-150 (156)
14 3r03_A Nudix hydrolase; struct 99.8 1.9E-20 6.5E-25 127.8 11.0 129 5-158 9-140 (144)
15 2o1c_A DATP pyrophosphohydrola 99.8 5.1E-20 1.7E-24 126.2 12.9 131 8-152 12-147 (150)
16 1sjy_A MUTT/nudix family prote 99.8 6.9E-20 2.4E-24 127.0 13.6 117 3-138 12-134 (159)
17 3f6a_A Hydrolase, nudix family 99.8 4.4E-20 1.5E-24 128.3 12.1 140 4-154 5-151 (159)
18 2w4e_A MUTT/nudix family prote 99.8 7.4E-20 2.5E-24 125.5 12.8 111 6-137 7-120 (145)
19 1hzt_A Isopentenyl diphosphate 99.8 6.9E-20 2.4E-24 131.0 12.9 131 4-152 32-171 (190)
20 2b0v_A Nudix hydrolase; struct 99.8 7.4E-20 2.5E-24 126.0 12.6 130 1-149 3-135 (153)
21 2jvb_A Protein PSU1, mRNA-deca 99.8 4.8E-20 1.7E-24 126.2 11.2 126 10-156 10-138 (146)
22 3oga_A Nucleoside triphosphata 99.8 1.9E-19 6.6E-24 125.7 14.5 126 4-149 27-161 (165)
23 3eds_A MUTT/nudix family prote 99.8 1.2E-20 4.2E-25 130.5 8.2 118 3-139 20-140 (153)
24 3ees_A Probable pyrophosphohyd 99.8 7.9E-20 2.7E-24 125.7 12.1 122 6-154 23-147 (153)
25 4dyw_A MUTT/nudix family prote 99.8 6.2E-20 2.1E-24 127.5 11.4 123 6-151 30-154 (157)
26 2azw_A MUTT/nudix family prote 99.8 1.3E-19 4.5E-24 124.0 12.6 123 6-150 20-143 (148)
27 3hhj_A Mutator MUTT protein; n 99.8 4.9E-20 1.7E-24 127.9 10.5 123 6-153 31-156 (158)
28 2fkb_A Putative nudix hydrolas 99.8 3.7E-19 1.2E-23 126.0 14.3 124 3-150 36-164 (180)
29 3id9_A MUTT/nudix family prote 99.8 6.2E-20 2.1E-24 128.9 10.2 114 6-136 24-137 (171)
30 1k2e_A Nudix homolog; nudix/MU 99.8 8.2E-20 2.8E-24 126.7 10.3 52 8-60 4-55 (156)
31 3q1p_A Phosphohydrolase (MUTT/ 99.8 5.4E-20 1.8E-24 133.2 9.4 126 7-156 70-197 (205)
32 3q93_A 7,8-dihydro-8-oxoguanin 99.8 2E-19 6.9E-24 127.2 11.2 113 2-136 22-136 (176)
33 2yvp_A NDX2, MUTT/nudix family 99.8 2.9E-19 9.9E-24 126.8 11.7 113 6-138 43-158 (182)
34 1mut_A MUTT, nucleoside tripho 99.8 4.4E-20 1.5E-24 123.5 7.0 110 3-136 3-115 (129)
35 3h95_A Nucleoside diphosphate- 99.8 6.2E-19 2.1E-23 127.0 13.4 123 9-151 31-155 (199)
36 2rrk_A ORF135, CTP pyrophospho 99.8 3.3E-19 1.1E-23 121.0 11.1 117 7-150 11-130 (140)
37 1vk6_A NADH pyrophosphatase; 1 99.8 2.2E-19 7.4E-24 134.8 11.1 122 8-155 143-265 (269)
38 3o8s_A Nudix hydrolase, ADP-ri 99.8 1.5E-19 5.2E-24 130.9 9.3 125 7-156 72-198 (206)
39 2pqv_A MUTT/nudix family prote 99.8 1.3E-19 4.6E-24 125.1 8.5 120 8-148 22-141 (154)
40 1rya_A GDP-mannose mannosyl hy 99.8 4.8E-19 1.6E-23 122.8 11.3 129 6-149 20-151 (160)
41 3i9x_A MUTT/nudix family prote 99.8 1.9E-19 6.3E-24 128.5 8.9 124 15-156 45-178 (187)
42 1mk1_A ADPR pyrophosphatase; n 99.8 5.7E-19 2E-23 128.0 11.3 112 8-138 47-162 (207)
43 1v8y_A ADP-ribose pyrophosphat 99.8 5.1E-19 1.7E-23 124.3 10.7 109 8-138 37-148 (170)
44 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 9.9E-19 3.4E-23 118.7 11.7 100 15-136 22-125 (139)
45 3fk9_A Mutator MUTT protein; s 99.8 4.9E-19 1.7E-23 126.5 10.6 122 7-150 6-127 (188)
46 3o6z_A GDP-mannose pyrophospha 99.8 7.9E-19 2.7E-23 125.7 10.6 105 15-138 57-170 (191)
47 1g0s_A Hypothetical 23.7 kDa p 99.8 3.5E-19 1.2E-23 129.3 8.7 116 6-138 58-183 (209)
48 3exq_A Nudix family hydrolase; 99.8 9.8E-19 3.4E-23 121.8 10.7 120 7-151 12-135 (161)
49 1vhz_A ADP compounds hydrolase 99.8 9.7E-19 3.3E-23 126.0 10.7 111 7-138 51-164 (198)
50 3cng_A Nudix hydrolase; struct 99.8 2.2E-18 7.6E-23 123.1 11.8 101 7-132 42-144 (189)
51 1q27_A Putative nudix hydrolas 99.8 1.1E-18 3.6E-23 122.6 9.1 108 6-136 36-150 (171)
52 2fb1_A Conserved hypothetical 99.8 5.4E-19 1.9E-23 129.7 7.9 122 15-157 27-150 (226)
53 1nqz_A COA pyrophosphatase (MU 99.8 2.5E-18 8.5E-23 123.2 11.1 112 4-135 34-152 (194)
54 2fvv_A Diphosphoinositol polyp 99.8 6.6E-19 2.3E-23 126.5 7.8 113 15-150 53-165 (194)
55 3f13_A Putative nudix hydrolas 99.8 5.9E-18 2E-22 118.3 11.7 115 7-155 18-132 (163)
56 3q91_A Uridine diphosphate glu 99.8 2.3E-18 7.9E-23 125.6 10.0 96 27-138 94-192 (218)
57 2a6t_A SPAC19A8.12; alpha/beta 99.8 2.7E-18 9.1E-23 129.2 10.2 109 8-136 104-214 (271)
58 1x51_A A/G-specific adenine DN 99.8 1.6E-17 5.5E-22 114.8 12.1 111 15-152 33-148 (155)
59 2b06_A MUTT/nudix family prote 99.8 5.6E-18 1.9E-22 116.9 9.6 116 7-149 10-131 (155)
60 3gz5_A MUTT/nudix family prote 99.7 4.1E-18 1.4E-22 126.1 9.4 125 15-159 36-165 (240)
61 2qjt_B Nicotinamide-nucleotide 99.7 9.1E-18 3.1E-22 130.4 11.7 115 7-134 210-329 (352)
62 2qjo_A Bifunctional NMN adenyl 99.7 6.7E-18 2.3E-22 130.5 10.6 114 7-134 205-322 (341)
63 2dsc_A ADP-sugar pyrophosphata 99.7 1.7E-17 5.7E-22 120.6 11.9 105 16-136 77-185 (212)
64 3e57_A Uncharacterized protein 99.7 4.5E-18 1.5E-22 123.0 8.6 129 2-154 65-207 (211)
65 3fjy_A Probable MUTT1 protein; 99.7 3.3E-17 1.1E-21 128.0 13.6 133 17-156 39-177 (364)
66 3fsp_A A/G-specific adenine gl 99.7 3.1E-16 1.1E-20 122.7 11.9 118 8-156 244-364 (369)
67 2dho_A Isopentenyl-diphosphate 99.7 1.5E-15 5E-20 112.0 14.5 132 3-151 58-213 (235)
68 2fml_A MUTT/nudix family prote 99.7 6.6E-16 2.2E-20 116.3 12.5 123 17-160 57-207 (273)
69 2pny_A Isopentenyl-diphosphate 99.7 1.9E-15 6.4E-20 112.1 14.2 133 3-152 69-225 (246)
70 1u20_A U8 snoRNA-binding prote 99.6 2.4E-16 8.2E-21 114.6 5.7 105 13-134 53-165 (212)
71 1q33_A Pyrophosphatase, ADP-ri 99.6 1.8E-14 6.2E-19 109.3 11.5 41 17-58 140-180 (292)
72 3dup_A MUTT/nudix family prote 99.6 3.3E-14 1.1E-18 107.8 12.2 119 3-137 117-245 (300)
73 3qsj_A Nudix hydrolase; struct 99.5 7E-14 2.4E-18 102.6 10.6 58 3-60 7-92 (232)
74 2xsq_A U8 snoRNA-decapping enz 99.5 8.9E-15 3E-19 106.6 4.4 101 16-132 65-171 (217)
75 3rh7_A Hypothetical oxidoreduc 99.3 1.4E-11 4.9E-16 94.4 10.1 105 6-149 184-289 (321)
76 3bho_A Cleavage and polyadenyl 99.2 1E-10 3.4E-15 83.2 8.2 52 4-57 58-112 (208)
77 3kvh_A Protein syndesmos; NUDT 99.1 5.4E-11 1.9E-15 83.7 4.8 38 18-57 46-84 (214)
78 3t3l_A Frataxin, mitochondrial 36.5 85 0.0029 20.2 5.2 22 38-59 96-117 (129)
79 2hl0_A Threonyl-tRNA synthetas 35.9 29 0.00098 23.0 2.8 47 120-168 73-119 (143)
80 2drn_C 24-residues peptide fro 27.7 44 0.0015 14.9 1.8 10 42-51 2-11 (26)
81 1zl8_A LIN-7; heterodimer, alp 22.1 47 0.0016 17.7 1.5 13 42-54 39-51 (53)
No 1
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.94 E-value=5.2e-26 Score=158.77 Aligned_cols=151 Identities=56% Similarity=1.112 Sum_probs=109.6
Q ss_pred eeeeeEEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccc
Q 030956 3 YAECSVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKV 82 (168)
Q Consensus 3 ~r~~~~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (168)
||.++.+++++.+++|||++|...+|.|.+|||+++.|||+.+||+||++||||+.+..+.........+.++.......
T Consensus 13 ~~~~v~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (165)
T 1f3y_A 13 YRRNVGICLMNNDKKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPPKVREKL 92 (165)
T ss_dssp CCCEEEEEEECTTSCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSCCBCCCCHHHHHHH
T ss_pred eeeeEEEEEECCCCcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccceeeecCccccccc
Confidence 67777777777789999999987668999999999999999999999999999999655544444444555554332222
Q ss_pred ccccCCccccceEEEEEEEEccCCcccccC-CCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHH
Q 030956 83 NRLWGGEWHGQAQKWFLMKLTNDESEINLA-NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPY 153 (168)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~ 153 (168)
...|.+.+.++..++|.+.+.......... ...+..|+.+++|++++++.+++.+.....++++++.|+++
T Consensus 93 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~~l~~~ 164 (165)
T 1f3y_A 93 NIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVEFKKPVYKEVLSVFAPH 164 (165)
T ss_dssp GGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCGGGHHHHHHHHHHHGGG
T ss_pred cccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhhhhHHHHHHHHHHhhhc
Confidence 223444444556688888886543332221 11245689999999999999998766678888888877764
No 2
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.93 E-value=5.8e-25 Score=149.36 Aligned_cols=127 Identities=24% Similarity=0.360 Sum_probs=85.9
Q ss_pred eeeeEEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccc
Q 030956 4 AECSVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVN 83 (168)
Q Consensus 4 r~~~~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (168)
+..++.+|+.++++|||++|++ |.|.+|||+++.|||+.+||+||++||||+.+... ..++. ..+.+...
T Consensus 3 ~~~aag~vv~~~~~vLL~~r~~--g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~-~~l~~-~~~~~~~~------ 72 (134)
T 3i7u_A 3 KEFSAGGVLFKDGEVLLIKTPS--NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEIL-DYIGE-IHYWYTLK------ 72 (134)
T ss_dssp EEEEEEEEEEETTEEEEEECTT--SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEE-EEEEEEET------
T ss_pred cEEEEEEEEEECCEEEEEEeCC--CcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEe-eeeee-eeEEecCC------
Confidence 3445667778899999999875 88999999999999999999999999999996432 22221 11211111
Q ss_pred cccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHH
Q 030956 84 RLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 154 (168)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l 154 (168)
+.......++|.+....... .+..|+.+++|++++++.+++. .+..+.+++.+.+.+
T Consensus 73 ----~~~~~~~~~~f~~~~~~~~~-------~~~~E~~~~~W~~~~e~~~~l~---~~~~r~il~~a~~l~ 129 (134)
T 3i7u_A 73 ----GERIFKTVKYYLMKYKEGEP-------RPSWEVKDAKFFPIKEAKKLLK---YKGDKEIFEKALKLK 129 (134)
T ss_dssp ----TEEEEEEEEEEEEEEEEECC-------CCCTTSSEEEEEEHHHHHHHBC---SHHHHHHHHHHHHHH
T ss_pred ----CceEEEEEEEEEEEEcCCcC-------cCChhheEEEEEEHHHHhhhcC---ChHHHHHHHHHHHHH
Confidence 11112234677777655432 2335899999999999999875 344555665544433
No 3
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.92 E-value=6e-25 Score=152.56 Aligned_cols=122 Identities=19% Similarity=0.298 Sum_probs=84.3
Q ss_pred CCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccccCCccccce
Q 030956 15 LGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQA 94 (168)
Q Consensus 15 ~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (168)
+.++||++|++.+|.|.+|||+++.|||+.+||+||++||||+.+........+.....+.... ....
T Consensus 23 ~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~------------~~~~ 90 (155)
T 3u53_A 23 AIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARN------------KPKT 90 (155)
T ss_dssp SEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEETT------------EEEE
T ss_pred CcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeeeEeeeeecCCCc------------ceeE
Confidence 5579999998877899999999999999999999999999999964332221211111111111 1122
Q ss_pred EEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHhh
Q 030956 95 QKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 156 (168)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~~ 156 (168)
..+|.+......... ...+|+.+++|++++++.+++. .+..+.++..+.++|..
T Consensus 91 ~~~~~~~~~~~~~~~-----~~~~E~~~~~W~~~~ea~~~~~---~~~~~~~L~~a~~~L~~ 144 (155)
T 3u53_A 91 VIYWLAEVKDYDVEI-----RLSHEHQAYRWLGLEEACQLAQ---FKEMKAALQEGHQFLCS 144 (155)
T ss_dssp EEEEEEEESCTTCCC-----CCCTTEEEEEEECHHHHHHHHC---SHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEeccCCcc-----CCCcceeEEEEeEHHHHHHHcC---CHHHHHHHHHHHHHHhC
Confidence 355666665443322 2335899999999999998875 45667788887777765
No 4
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.88 E-value=1.2e-21 Score=137.16 Aligned_cols=149 Identities=36% Similarity=0.633 Sum_probs=101.1
Q ss_pred eeeeeEEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCcccee--eeecCCceeecCCccccc
Q 030956 3 YAECSVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI--IAEVPNWLTYDFPPAVKT 80 (168)
Q Consensus 3 ~r~~~~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~--~~~~~~~~~~~~~~~~~~ 80 (168)
+|.++.++++..+++||+++|.. +|.|.+|||+++.|||+.+||.||++||||+.+..+ +........+.++.....
T Consensus 7 ~~~~v~~~i~~~~~~vLl~~r~~-~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (164)
T 2kdv_A 7 YRPNVGIVICNRQGQVMWARRFG-QHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVR 85 (164)
T ss_dssp EEEEEEEEEECTTSEEEEEEETT-CCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEEECCTTTCC
T ss_pred CCcEEEEEEEccCCEEEEEEEcC-CCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEEecceeEEecCcceee
Confidence 56676666666788999999886 689999999999999999999999999999996432 222222223333332110
Q ss_pred ccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHhh
Q 030956 81 KVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 156 (168)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~~ 156 (168)
. .......++..++|.+.+.......... ..+..|+.+++|++++++.+.+.++....++.++..+...+..
T Consensus 86 ~---~~~~~~~~~~~~~f~~~~~~~~~~~~l~-~~~~~E~~~~~W~~~~e~~~~l~~~~~~~~~~~l~~l~~~l~~ 157 (164)
T 2kdv_A 86 W---DTKPVCIGQKQKWFLLQLVSGDAEINMQ-TSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMS 157 (164)
T ss_dssp T---TSSSCCCEEEEEEEEEEESSCGGGCCSC-SSSSCSEEEEEEEETTTGGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred e---ccCcccccceeEEEEEEecCCccccccC-CCCCchhceEEEecHHHhhhhhhhhhHHHHHHHHHHHHHHHhH
Confidence 0 0011222345678888876554333221 1134589999999999988766544468888888888776654
No 5
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.87 E-value=2.8e-21 Score=131.04 Aligned_cols=118 Identities=25% Similarity=0.477 Sum_probs=81.8
Q ss_pred CCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeee--ecCCceeecCCcccccccccccCCcccc
Q 030956 15 LGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIA--EVPNWLTYDFPPAVKTKVNRLWGGEWHG 92 (168)
Q Consensus 15 ~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (168)
++++||++|+..+|.|.+|||+++.||++.+||+||++||||+.+..+.. .......+.++.. .
T Consensus 17 ~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~--------------~ 82 (138)
T 1ktg_A 17 KIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYEAKGK--------------P 82 (138)
T ss_dssp EEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEETTE--------------E
T ss_pred CcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEEEeCCC--------------c
Confidence 35899999986567999999999999999999999999999996432211 1111122222211 1
Q ss_pred ceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHh
Q 030956 93 QAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 155 (168)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~ 155 (168)
...++|.+....... . .+..|+.+++|++++++.++.. .+..+.++..+..++.
T Consensus 83 ~~~~~f~~~~~~~~~--~----~~~~e~~~~~W~~~~el~~~~~---~~~~~~~l~~~~~~l~ 136 (138)
T 1ktg_A 83 KSVKYWLAKLNNPDD--V----QLSHEHQNWKWCELEDAIKIAD---YAEMGSLLRKFSAFLA 136 (138)
T ss_dssp EEEEEEEEEECSCCC--C----CCCTTEEEEEEECHHHHHHHHC---CHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEecCCcc--c----CCCchhcEeEeccHHHHHHhhc---cchHHHHHHHHHHHhh
Confidence 234677777754311 1 2345889999999999999875 5566777777777764
No 6
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.86 E-value=5e-21 Score=129.09 Aligned_cols=125 Identities=24% Similarity=0.362 Sum_probs=83.2
Q ss_pred eEEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccccccc
Q 030956 7 SVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLW 86 (168)
Q Consensus 7 ~~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (168)
++.+++.++++|||++|++ |.|.+|||+++.|||+.+||.||++||||+.+... ..+.. ..+.+...
T Consensus 6 ~~~~vi~~~~~vLl~~r~~--~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~~-~~~~~~~~--------- 72 (134)
T 2pbt_A 6 SAGGVLFKDGEVLLIKTPS--NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEIL-DYIGE-IHYWYTLK--------- 72 (134)
T ss_dssp EEEEEEEETTEEEEEECTT--SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEE-EEEEEEET---------
T ss_pred EEEEEEEECCEEEEEEeCC--CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEe-eeeeE-EEEEeeCC---------
Confidence 3445666688999999987 89999999999999999999999999999996433 22221 12222211
Q ss_pred CCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHh
Q 030956 87 GGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 155 (168)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~ 155 (168)
+.......++|.+........ ..+|+.+++|++++++.++.. .+..+.++..+...+.
T Consensus 73 -~~~~~~~~~~~~~~~~~~~~~-------~~~e~~~~~W~~~~el~~~~~---~~~~~~~l~~~~~~~~ 130 (134)
T 2pbt_A 73 -GERIFKTVKYYLMKYKEGEPR-------PSWEVKDAKFFPIKEAKKLLK---YKGDKEIFEKALKLKE 130 (134)
T ss_dssp -TEEEEEEEEEEEEEEEEECCC-------CCTTSSEEEEEEHHHHHHHCC---SHHHHHHHHHHHHHHH
T ss_pred -CcEEEEEEEEEEEEecCCCcC-------CCcceeEEEEEcHHHHHhhhc---chhHHHHHHHHHHHhh
Confidence 001122345666666543221 222889999999999999875 4455566665554443
No 7
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.86 E-value=6.1e-21 Score=131.19 Aligned_cols=122 Identities=21% Similarity=0.247 Sum_probs=84.4
Q ss_pred eCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCce-----eecCCcccccccccccCC
Q 030956 14 YLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWL-----TYDFPPAVKTKVNRLWGG 88 (168)
Q Consensus 14 ~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 88 (168)
.+++||+++|.. +|.|.+|||+++.||++.+||+||++||||+.+......+.... .+.++...
T Consensus 18 ~~~~vLl~~r~~-~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 86 (149)
T 3son_A 18 ANYQFGVLHRTD-ADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIPNFHFSFNKPY---------- 86 (149)
T ss_dssp SSEEEEEEEESS-SSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGGTCSSSCS----------
T ss_pred CCeEEEEEEEcC-CCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecccceeeccCCce----------
Confidence 356899999987 49999999999999999999999999999999643211111111 11111111
Q ss_pred ccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHhhc
Q 030956 89 EWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNEN 157 (168)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~~~ 157 (168)
....++|.+.......... ...|+.+++|++++++.++.. .+..+.++..+..++...
T Consensus 87 ---~~~~~~f~~~~~~~~~~~~-----~~~E~~~~~W~~~~el~~~~~---~~~~~~~l~~~~~~l~~~ 144 (149)
T 3son_A 87 ---VVPEYCFAIDLTSCSYQVT-----LSLEHSELRWVSYESAIQLLE---WDSNKTALYELNERLKNN 144 (149)
T ss_dssp ---EEEEEEEEEECTTTGGGCC-----CCTTEEEEEEECHHHHHHHCC---CHHHHHHHHHHHHHHHTT
T ss_pred ---EeEEEEEEEEcCCCCCccc-----CCCceeeEEEeCHHHHHHHhc---CHHHHHHHHHHHHHHhhc
Confidence 1223567777653222221 125899999999999999876 567778888888777664
No 8
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.86 E-value=1.8e-20 Score=125.15 Aligned_cols=120 Identities=20% Similarity=0.283 Sum_probs=82.3
Q ss_pred eEEEEEe-eCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccc
Q 030956 7 SVLSMLI-YLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRL 85 (168)
Q Consensus 7 ~~~~v~~-~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (168)
++.+++. .++++|+++|+. |.|.+|||+++.||++.+||.||++||||+.+.... .+.. ..+.++..
T Consensus 4 ~~~~vi~~~~~~vLl~~r~~--g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~-~~~~-~~~~~~~~-------- 71 (126)
T 1vcd_A 4 GAGGVVFNAKREVLLLRDRM--GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLL-PLYP-TRYVNPKG-------- 71 (126)
T ss_dssp EEEEEEECTTSCEEEEECTT--SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEE-EEEE-EEEECTTS--------
T ss_pred EEEEEEEcCCCEEEEEEECC--CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeecc-EEeE-EEEecCCc--------
Confidence 3444444 477899999987 889999999999999999999999999999964332 2221 22322211
Q ss_pred cCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHH
Q 030956 86 WGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 154 (168)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l 154 (168)
....++|.+...... . .+..|..+++|++++++.++.. .+..+.++..+..++
T Consensus 72 ------~~~~~~~~~~~~~~~----~---~~~~e~~~~~w~~~~el~~~~~---~~~~~~~l~~~~~~l 124 (126)
T 1vcd_A 72 ------VEREVHWFLMRGEGA----P---RLEEGMTGAGWFSPEEARALLA---FPEDLGLLEVALERL 124 (126)
T ss_dssp ------CEEEEEEEEEEEESC----C---CCCTTCCEEEEECHHHHHHHBC---SHHHHHHHHHHHHHS
T ss_pred ------eEEEEEEEEEEcCCC----C---CCCcceeeeEEcCHHHHHHhhc---ChhHHHHHHHHHHhc
Confidence 112356666554332 1 2335889999999999999875 456666666665544
No 9
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.85 E-value=2.1e-20 Score=129.15 Aligned_cols=123 Identities=18% Similarity=0.271 Sum_probs=83.2
Q ss_pred eeeeEEEEEeeCCcEEEEEecCC----CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccc
Q 030956 4 AECSVLSMLIYLGQIFVASRLNV----PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVK 79 (168)
Q Consensus 4 r~~~~~~v~~~~~~vLl~~r~~~----~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~ 79 (168)
+.++.+++++.+++|||++|... +|.|.+|||+++.||++.+||+||++||||+.+.... .+.. ..+.++...
T Consensus 8 ~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~-~~~~-~~~~~~~~~- 84 (153)
T 3grn_A 8 IISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGD-IAGQ-VNFELTEKK- 84 (153)
T ss_dssp EEEEEEEEECTTCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCS-EEEE-EEEECSSCE-
T ss_pred EEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecce-EEEE-EEEecCCce-
Confidence 33444444455889999999863 4899999999999999999999999999999864321 1111 223333211
Q ss_pred cccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhc-ccCChHHHHHHHHHHHH
Q 030956 80 TKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA-VDYKRPTYEEVMRTFRP 152 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~-~~~~~~~~~~~l~~l~~ 152 (168)
...++|.+....... ....|..+++|++++++.++. + ++..+.++..+..
T Consensus 85 -------------~~~~~~~~~~~~~~~-------~~~~e~~~~~W~~~~el~~~~~~---~~~~~~~l~~l~~ 135 (153)
T 3grn_A 85 -------------VIAIVFDGGYVVADV-------KLSYEHIEYSWVSLEKILGMETL---PAYFRDFFERFDR 135 (153)
T ss_dssp -------------EEEEEEEEEECCCCC-------CCCTTEEEEEEECHHHHTTCSSS---CHHHHHHHHHHHH
T ss_pred -------------EEEEEEEEEecCCcE-------ecCCCcceEEEEEHHHhhhcccc---hHHHHHHHHHHhc
Confidence 123455555443321 123588999999999999986 5 5677777777644
No 10
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.85 E-value=1.2e-20 Score=128.55 Aligned_cols=120 Identities=18% Similarity=0.203 Sum_probs=80.9
Q ss_pred eEEEEEeeCCcEEEEEecC-----CCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccc
Q 030956 7 SVLSMLIYLGQIFVASRLN-----VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTK 81 (168)
Q Consensus 7 ~~~~v~~~~~~vLl~~r~~-----~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~ 81 (168)
++++++.+++++||++|+. .+|.|.+|||+++.||++.+||.||++||||+.+... ..+.. ..+.+++.
T Consensus 8 ~v~~vi~~~~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~-~~~~~-~~~~~~~~---- 81 (140)
T 3gwy_A 8 VVAAVIRLGEKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVG-EKLLT-VHHTYPDF---- 81 (140)
T ss_dssp EEEEEEEETTEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEE-EEEEE-EECCCSSC----
T ss_pred EEEEEEEeCCEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEec-eEEEE-EEEEeCCc----
Confidence 3445566689999999985 3578999999999999999999999999999996433 22221 23333321
Q ss_pred cccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHH
Q 030956 82 VNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPY 153 (168)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~ 153 (168)
....++|.+....... ...|..+++|++++++.++.+ .+..+.+++.+...
T Consensus 82 ----------~~~~~~f~~~~~~~~~--------~~~E~~~~~W~~~~el~~~~~---~~~~~~il~~~~~~ 132 (140)
T 3gwy_A 82 ----------EITMHAFLCHPVGQRY--------VLKEHIAAQWLSTREMAILDW---AEADKPIVRKISEQ 132 (140)
T ss_dssp ----------CEEEEEEEEEECCSCC--------CCCSSCEEEEECHHHHTTSCB---CGGGHHHHHHHHC-
T ss_pred ----------eEEEEEEEEEecCCcc--------cccccceeEeccHHHHhhCCC---CcccHHHHHHHHhC
Confidence 1123566666654321 124789999999999999876 45555666665443
No 11
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.85 E-value=2.7e-20 Score=128.43 Aligned_cols=111 Identities=24% Similarity=0.315 Sum_probs=77.4
Q ss_pred CceeeeeEEEEEeeCCcEEEEEecC-CCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccc
Q 030956 1 MIYAECSVLSMLIYLGQIFVASRLN-VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVK 79 (168)
Q Consensus 1 ~~~r~~~~~~v~~~~~~vLl~~r~~-~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~ 79 (168)
|...+.++++++.+++++||++|.. .+|.|.+|||+++.|||+.+||+||++||||+.+... ..+. ...+.+++..
T Consensus 1 m~~p~~~v~~ii~~~~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~-~~~~~~~~~~- 77 (153)
T 3shd_A 1 MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQ-HFIR-MHQWIAPDKT- 77 (153)
T ss_dssp CCCCEEEEEEEEEETTEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCC-EEEE-EEEECCTTSC-
T ss_pred CCCCceEEEEEEEeCCEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccC-cEEE-EEEEecCCCc-
Confidence 5555666777788899999999864 2478999999999999999999999999999996432 2211 1223333211
Q ss_pred cccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHH
Q 030956 80 TKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEV 131 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~ 131 (168)
....++|.+....... .. .+..|+.+++|++++++
T Consensus 78 ------------~~~~~~f~~~~~~~~~-~~----~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 78 ------------PFLRFLFAIELEQICP-TQ----PHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp ------------CEEEEEEEEECSSCCC-CC----CCSTTCCEEEEECHHHH
T ss_pred ------------eEEEEEEEEEccccCc-CC----CCcccceeeEEecHHHh
Confidence 1223566666654321 11 24468999999999999
No 12
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.84 E-value=3e-20 Score=133.68 Aligned_cols=141 Identities=15% Similarity=0.190 Sum_probs=79.6
Q ss_pred eeeeEEEEEeeCC-cEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceee-cCCcccccc
Q 030956 4 AECSVLSMLIYLG-QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTY-DFPPAVKTK 81 (168)
Q Consensus 4 r~~~~~~v~~~~~-~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~-~~~~~~~~~ 81 (168)
+.++.++++..++ +|||++++. .|.|.+|||+++.|||+.+||+||++||||+....+.........+ ..+...
T Consensus 45 h~~~~~vv~~~~~~~vLL~~r~~-~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~--- 120 (197)
T 3fcm_A 45 HLTSSAFAVNKERNKFLMIHHNI-YNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVLTVNGHI--- 120 (197)
T ss_dssp EEEEEEEEECTTSCEEEEEEETT-TTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEEEEECCEE---
T ss_pred cEEEEEEEEECCCCEEEEEEecC-CCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEEeeecCcc---
Confidence 3444545555554 999999886 5899999999999999999999999999999821221111111111 111000
Q ss_pred cccccCCccccc---eEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHhhcC
Q 030956 82 VNRLWGGEWHGQ---AQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNENG 158 (168)
Q Consensus 82 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~~~~ 158 (168)
..+.+... ...+|.+...... ... .+..|+.+++|++++++.++.. .+.+..++..+..++.+..
T Consensus 121 ----~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~E~~~~~W~~~~el~~~~~---~~~~~~il~~~~~~l~~~~ 188 (197)
T 3fcm_A 121 ----KRGKYVSSHLHLNLTYLIECSEDE-TLM----LKEDENSGVMWIPFNEISKYCS---EPHMIPIYEKLINKLKTQS 188 (197)
T ss_dssp ----ETTEEECCEEEEEEEEEEECCTTS-CCC----CCC----CEEEEEGGGHHHHCC---CGGGHHHHHHHHHHHHC--
T ss_pred ----ccCcccCCceeEEEEEEEEeCCCc-ccC----CCcccccceEEccHHHHHhhcC---CHHHHHHHHHHHHHHHhcc
Confidence 00111111 1134444443221 111 2346889999999999999875 3344456666666776654
Q ss_pred cc
Q 030956 159 IA 160 (168)
Q Consensus 159 ~~ 160 (168)
+.
T Consensus 189 ~~ 190 (197)
T 3fcm_A 189 KE 190 (197)
T ss_dssp --
T ss_pred cc
Confidence 43
No 13
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.84 E-value=6.8e-21 Score=131.89 Aligned_cols=125 Identities=19% Similarity=0.251 Sum_probs=85.3
Q ss_pred EEEEEeeCCcEEEEEecCC--CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccc
Q 030956 8 VLSMLIYLGQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRL 85 (168)
Q Consensus 8 ~~~v~~~~~~vLl~~r~~~--~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (168)
+++++..+++|||++|.+. +|.|.+|||+++.||++.+||+||++||||+.+... ..+.. ..+ ..
T Consensus 24 ~~~i~~~~~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~~~~-~~~--~~--------- 90 (156)
T 3gg6_A 24 LAVFLSEQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPE-TLLSV-EER--GP--------- 90 (156)
T ss_dssp EEECBCTTSEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE-EEEEE-EES--ST---------
T ss_pred EEEEEeCCCEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEee-eEEEE-EcC--CC---------
Confidence 3344455789999999864 489999999999999999999999999999996432 22221 111 11
Q ss_pred cCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHhhc
Q 030956 86 WGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNEN 157 (168)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~~~ 157 (168)
....++|.+........... .+..|+.+++|++++++.+++. ...+..++.....++...
T Consensus 91 ------~~~~~~f~~~~~~~~~~~~~---~~~~E~~~~~W~~~~el~~~~~---~~~~~~~l~~~~~~~~~~ 150 (156)
T 3gg6_A 91 ------SWVRFVFLARPTGGILKTSK---EADAESLQAAWYPRTSLPTPLR---AHDILHLVELAAQYRQQA 150 (156)
T ss_dssp ------TEEEEEEEEEEEEECCCCGG---GCSSSCSEEEEEETTSCCSSBS---CTHHHHHHHHHHHHHHHH
T ss_pred ------CEEEEEEEEEeeCCeeccCC---CCCcceeeeEEEcHHHCccccc---chhHHHHHHHHHHHhhcC
Confidence 11235677776544322211 2446889999999999998776 445556666666666553
No 14
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.84 E-value=1.9e-20 Score=127.77 Aligned_cols=129 Identities=19% Similarity=0.309 Sum_probs=83.1
Q ss_pred eeeEEEEEeeCCcEEEEEecCC---CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccc
Q 030956 5 ECSVLSMLIYLGQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTK 81 (168)
Q Consensus 5 ~~~~~~v~~~~~~vLl~~r~~~---~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~ 81 (168)
.+++++++..+++|||++|... +|.|.+|||+++.||++.+||.||+.||||+.+............+.+.+..
T Consensus 9 ~~~~~vi~~~~~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~--- 85 (144)
T 3r03_A 9 LVTAAALIDPDGRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSYDTFH--- 85 (144)
T ss_dssp EEEEEEEBCTTSCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSSE---
T ss_pred EEEEEEEEcCCCEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccCCCeE---
Confidence 3444455556889999999853 4899999999999999999999999999999864321111112233333221
Q ss_pred cccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHhhcC
Q 030956 82 VNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNENG 158 (168)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~~~~ 158 (168)
...++|.+...... ....|..+++|++++++.++.+ ++..+.+++.+......+.
T Consensus 86 -----------~~~~~~~~~~~~~~--------~~~~e~~~~~W~~~~el~~~~~---~~~~~~~l~~~~~~~~~~~ 140 (144)
T 3r03_A 86 -----------LLMPLYACRSWRGR--------ATAREGQTLAWVRAERLREYPM---PPADLPLIPILQDWLEGHH 140 (144)
T ss_dssp -----------EEEEEEEECCCBSC--------CCCCSSCEEEEECGGGGGGSCC---CTTTTTHHHHHHHHC----
T ss_pred -----------EEEEEEEEEecCCc--------cCCCCcceEEEEeHHHhccCCC---CcchHHHHHHHhCcccccc
Confidence 11244544443321 1234788999999999999876 4555566666665555443
No 15
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.84 E-value=5.1e-20 Score=126.22 Aligned_cols=131 Identities=20% Similarity=0.366 Sum_probs=81.3
Q ss_pred EEEEEe-e-CCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCcccee-eeecCCceeecC--Cccccccc
Q 030956 8 VLSMLI-Y-LGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI-IAEVPNWLTYDF--PPAVKTKV 82 (168)
Q Consensus 8 ~~~v~~-~-~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~-~~~~~~~~~~~~--~~~~~~~~ 82 (168)
+.+++. . ++++||++|+..+|.|.+|||+++.||++.+||+||++||||+.+... ...++......| .....
T Consensus 12 v~~~i~~~~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~--- 88 (150)
T 2o1c_A 12 ILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLR--- 88 (150)
T ss_dssp EEEEEEETTTCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEECCGGGG---
T ss_pred EEEEEEeCCCCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeeceeeeeeecccc---
Confidence 334444 3 489999998875789999999999999999999999999999996431 011111111100 00000
Q ss_pred ccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHH
Q 030956 83 NRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRP 152 (168)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~ 152 (168)
+...+.......++|.+....... . ...|..+++|++++++.++.. .+..+.++..+..
T Consensus 89 -~~~~~~~~~~~~~~f~~~~~~~~~---~----~~~E~~~~~W~~~~el~~~~~---~~~~~~~l~~~~~ 147 (150)
T 2o1c_A 89 -HRYAPGVTRNTESWFCLALPHERQ---I----VFTEHLAYKWLDAPAAAALTK---SWSNRQAIEQFVI 147 (150)
T ss_dssp -GGBCTTCCEEEEEEEEEEESSCCC---C----CCSSSSCEEEEEHHHHHHHCS---CHHHHHHHHHHTT
T ss_pred -cccCCCCcceEEEEEEEEcCCCCC---c----ChhHhhccEeecHHHHHhhhc---CHHHHHHHHHHHH
Confidence 000000012234667776654321 1 125889999999999999875 4556666666543
No 16
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.84 E-value=6.9e-20 Score=126.95 Aligned_cols=117 Identities=25% Similarity=0.347 Sum_probs=79.8
Q ss_pred eeeeeEEEEEeeCCcEEEEEecC------CCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCc
Q 030956 3 YAECSVLSMLIYLGQIFVASRLN------VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPP 76 (168)
Q Consensus 3 ~r~~~~~~v~~~~~~vLl~~r~~------~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~ 76 (168)
++.+++++++..++++||++|+. .+|.|.+|||+++.||++.+||+||++||||+.+..+.. +.. ..+.+++
T Consensus 12 ~~~~~~~vi~~~~~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-l~~-~~~~~~~ 89 (159)
T 1sjy_A 12 ELRAAGVVLLNERGDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKF-LGA-YLGRFPD 89 (159)
T ss_dssp CEEEEEEEEBCTTCCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEE-EEE-EEEECTT
T ss_pred EEEeEEEEEEeCCCCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEE-EEE-EecccCC
Confidence 34554545555588999999985 458999999999999999999999999999999643322 221 2232333
Q ss_pred ccccccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccC
Q 030956 77 AVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDY 138 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~ 138 (168)
+. ....++|.+....... ... .+..|+.+++|++++++.++..+.
T Consensus 90 ~~-------------~~~~~~f~~~~~~~~~-~~~---~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 90 GV-------------LILRHVWLAEPEPGQT-LAP---AFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp SC-------------EEEEEEEEEEECSSCC-CCC---CCCSSEEEEEEECHHHHHHHHHTT
T ss_pred Cc-------------eEEEEEEEEEccCCCc-ccc---CCCCceeEEEEecHHHHHHhhhcc
Confidence 21 1224667777643320 111 134588999999999999987643
No 17
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.83 E-value=4.4e-20 Score=128.32 Aligned_cols=140 Identities=16% Similarity=0.107 Sum_probs=84.0
Q ss_pred eeeeEEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCce--eecCCccccc-
Q 030956 4 AECSVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWL--TYDFPPAVKT- 80 (168)
Q Consensus 4 r~~~~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~--~~~~~~~~~~- 80 (168)
++.++.+++.++++|||++|+. +|.|.+|||+++.|||+.+||+||++||||+.+... ..+.... ...+++....
T Consensus 5 ~~~~v~~vi~~~~~vLL~~r~~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~~~~~~~~~~~~~~~~~ 82 (159)
T 3f6a_A 5 RHFTVSVFIVCKDKVLLHLHKK-AKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLY-NPIDINLKKSCDLSGEKLLI 82 (159)
T ss_dssp SCEEEEEEEEETTEEEEEECSS-SCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEEC-CCCCHHHHHHHHHTTCEEEC
T ss_pred ceEEEEEEEEECCEEEEEEcCC-CCeEECCccCccCCCCHHHHHHHHHHHHhCCCceec-cccccccccccccccccccc
Confidence 3444556666689999999987 689999999999999999999999999999986432 2221100 0000000000
Q ss_pred ----ccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHH
Q 030956 81 ----KVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 154 (168)
Q Consensus 81 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l 154 (168)
...... .........+|.+........ . +..|..+++|++++++.++... +.....+...+...+
T Consensus 83 ~p~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~--~----~~~E~~~~~W~~~~el~~~~~~--~~~~~~l~~~~~~~~ 151 (159)
T 3f6a_A 83 NPIHTILGDV-SPNHSHIDFVYYATTTSFETS--P----EIGESKILKWYSKEDLKNAHNI--QENILVMATEALDLL 151 (159)
T ss_dssp CCSEEEEECS-SSSSCEEEEEEEEECSCSCCC--C----CTTSCCCEEEECSSSSTTCSSS--CHHHHHHHHHHHHHC
T ss_pred CccccccccC-CCCceEEEEEEEEEeCCCCcC--C----CCCcccceEEeeHHHHhhCcCC--ChhHHHHHHHHHHHH
Confidence 000000 000011224566665443221 1 3458899999999999988632 555555555554443
No 18
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.83 E-value=7.4e-20 Score=125.48 Aligned_cols=111 Identities=24% Similarity=0.282 Sum_probs=69.2
Q ss_pred eeEEEEEeeCCcEEEEEecCCC---CcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccc
Q 030956 6 CSVLSMLIYLGQIFVASRLNVP---GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKV 82 (168)
Q Consensus 6 ~~~~~v~~~~~~vLl~~r~~~~---g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (168)
++++++++.++++||+++.+.+ +.|.+|||+++.|||+.+||.||++||||+.+..+.. +... +. ....
T Consensus 7 ~v~vi~~~~~~~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~-l~~~--~~-~~~~---- 78 (145)
T 2w4e_A 7 AVFILPVTAQGEAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVP-LPGF--YP-QPSI---- 78 (145)
T ss_dssp EEEEEEEETTSEEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEE-CCCB--BS-CTTT----
T ss_pred EEEEEEEcCCCEEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEE-EecC--cC-CCCc----
Confidence 4344444567899888765422 4899999999999999999999999999999654322 2211 11 1110
Q ss_pred ccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhccc
Q 030956 83 NRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVD 137 (168)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~ 137 (168)
.....++|.+...... ... .+..|+.+++|+|++++.+++.+
T Consensus 79 --------~~~~~~~f~~~~~~~~-~~~----~~~~E~~~~~w~~~~el~~~~~~ 120 (145)
T 2w4e_A 79 --------SGVVFYPLLALGVTLG-AAQ----LEDTETIERVVLPLAEVYRMLEA 120 (145)
T ss_dssp --------CCCEEEEEEEEEEEEC-------------CEEEEEEEHHHHHHHHHH
T ss_pred --------cCceEEEEEEEecccC-CCC----CCCCCeEEEEEEeHHHHHHHHHc
Confidence 0122456666532211 111 23458899999999999998753
No 19
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.83 E-value=6.9e-20 Score=130.98 Aligned_cols=131 Identities=18% Similarity=0.181 Sum_probs=83.4
Q ss_pred eeeeEEEEEeeCCcEEEEEecCC----CCcEEc-CccccCCCCCHHHHHHHHHHHhhCCcccee-eeecCCceeecCCcc
Q 030956 4 AECSVLSMLIYLGQIFVASRLNV----PGAWQM-PQGGIEDGEDPKLAAMRELREETGIVSAEI-IAEVPNWLTYDFPPA 77 (168)
Q Consensus 4 r~~~~~~v~~~~~~vLl~~r~~~----~g~w~l-P~G~ie~~E~~~eaa~RE~~EEtGi~~~~~-~~~~~~~~~~~~~~~ 77 (168)
++++.++++..++++||++|... +|.|.+ |||+++.|||+.+||+||++||||+.+..+ .....+.....+++.
T Consensus 32 ~~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 111 (190)
T 1hzt_A 32 HLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPSG 111 (190)
T ss_dssp EECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEETTCEEEEECTTS
T ss_pred EEEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheeeeeEEEEeeCCCC
Confidence 34555555556889999999742 589999 999999999999999999999999996543 222222111122221
Q ss_pred cccccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCC---hHHHHHHHHHHHH
Q 030956 78 VKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYK---RPTYEEVMRTFRP 152 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~---~~~~~~~l~~l~~ 152 (168)
... ....++|.+.... . .. .+..|+.+++|++++++.+++.... .+.++.+++.+..
T Consensus 112 ~~~-----------~~~~~~f~~~~~~-~--~~----~~~~E~~~~~W~~~~el~~~~~~~~~~~~p~~~~~~~~~~~ 171 (190)
T 1hzt_A 112 IVE-----------NEVCPVFAARTTS-A--LQ----INDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREA 171 (190)
T ss_dssp CEE-----------EEECCEEEEEBCS-C--CC----CCTTTEEEEEEECHHHHHHHHHHCGGGBCHHHHHHHHSHHH
T ss_pred Ccc-----------eEEEEEEEEecCC-C--Cc----CCccceeeEEEecHHHHHHHHHcChhhcCchHHHHHHHHHH
Confidence 100 1123456666432 1 11 1345889999999999998864321 3445555555443
No 20
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.83 E-value=7.4e-20 Score=126.05 Aligned_cols=130 Identities=15% Similarity=0.158 Sum_probs=81.2
Q ss_pred Cceee-eeEEEEEeeCCcEEEEEecCC--CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcc
Q 030956 1 MIYAE-CSVLSMLIYLGQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPA 77 (168)
Q Consensus 1 ~~~r~-~~~~~v~~~~~~vLl~~r~~~--~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~ 77 (168)
|.++. +++.+++.+++++||++|+.. +|.|.+|||+++.||++.+||+||++||||+.+... ..+.. ..+.++..
T Consensus 3 M~~~~~~~v~~ii~~~~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~-~~~~~~~~ 80 (153)
T 2b0v_A 3 MTWKPNVTVAAVIEQDDKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPE-VLTGI-YHWTCASN 80 (153)
T ss_dssp ---CCEEEEEEECEETTEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEE-EEEEE-EEEEETTT
T ss_pred CcccCCEEEEEEEeeCCEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccc-eEEEE-EEEeCCCC
Confidence 45443 445566677899999999863 468999999999999999999999999999996432 22221 12222221
Q ss_pred cccccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHH
Q 030956 78 VKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRT 149 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~ 149 (168)
.. ....++|.+........ . ....|..+++|++++++.++......+.+.+++..
T Consensus 81 ~~------------~~~~~~f~~~~~~~~~~--~---~~~~e~~~~~W~~~~el~~~~~~~~~~~~~~~l~~ 135 (153)
T 2b0v_A 81 GT------------TYLRFTFSGQVVSFDPD--R---KLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIED 135 (153)
T ss_dssp TE------------EEEEEEEEEEEEEECTT--S---CCCTTEEEEEEEEHHHHHHTGGGBSSTHHHHHHHH
T ss_pred Cc------------EEEEEEEEEEeCCCCCC--C---CCCCCeeeEEEecHHHHhhhhcccCcHHHHHHHHH
Confidence 10 11224566665432211 1 13458899999999999997332224444444443
No 21
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.83 E-value=4.8e-20 Score=126.19 Aligned_cols=126 Identities=17% Similarity=0.346 Sum_probs=79.9
Q ss_pred EEEeeC-CcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccccCC
Q 030956 10 SMLIYL-GQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGG 88 (168)
Q Consensus 10 ~v~~~~-~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (168)
+++..+ ++|||++|.. +|.|.+|||+++.|||+.+||.||++||||+.+..+..... .......
T Consensus 10 ~i~~~~~~~vLl~~r~~-~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~-~~~~~~~------------- 74 (146)
T 2jvb_A 10 AIFNENLSKILLVQGTE-SDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYIDDNQ-FIERNIQ------------- 74 (146)
T ss_dssp EEBCTTSSEEEEECCSS-SSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSCSSC-EEEEEET-------------
T ss_pred EEEeCCCCEEEEEEEcC-CCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhccccc-ccccccC-------------
Confidence 344443 8999999876 58999999999999999999999999999998653322111 1111000
Q ss_pred ccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccC--ChHHHHHHHHHHHHHHhh
Q 030956 89 EWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDY--KRPTYEEVMRTFRPYLNE 156 (168)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~--~~~~~~~~l~~l~~~l~~ 156 (168)
+...++|.+........... ....|+.+++|++++++.+++.+. ........+..+..++..
T Consensus 75 ---~~~~~~~~~~~~~~~~~~~~---~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~l~~~~~~ 138 (146)
T 2jvb_A 75 ---GKNYKIFLISGVSEVFNFKP---QVRNEIDKIEWFDFKKISKTMYKSNIKYYLINSMMRPLSMWLRH 138 (146)
T ss_dssp ---TEEEEEEEECCCCSSSCCCC---CCSSSCCCEEEEEHHHHHTGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred ---CceEEEEEEEeccccccCCc---CCcchhheeEEeEHHHHHhhhcccchhhhhHHHHHHHHHHHHHH
Confidence 11123444433222111111 235689999999999999987543 223444555666666654
No 22
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.83 E-value=1.9e-19 Score=125.71 Aligned_cols=126 Identities=21% Similarity=0.311 Sum_probs=78.8
Q ss_pred eeeeEEEEEeeCCcEEEEEecCC----CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCC-----ceeecC
Q 030956 4 AECSVLSMLIYLGQIFVASRLNV----PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPN-----WLTYDF 74 (168)
Q Consensus 4 r~~~~~~v~~~~~~vLl~~r~~~----~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~-----~~~~~~ 74 (168)
++.++++++.++++|||++|... +|.|.+|||+++.||++.+||+||++||||+.+... ..... ...+.+
T Consensus 27 ~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~~~~~~~~~~~~~~~ 105 (165)
T 3oga_A 27 QRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILS-DITPWTFRDDIRIKTY 105 (165)
T ss_dssp EEEEEEEEEEETTEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEE-EEEEEEEEEEEEEEEC
T ss_pred eEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCcccc-ceeeeeeecceeeEec
Confidence 44556677778899999998852 389999999999999999999999999999996422 11111 112333
Q ss_pred CcccccccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHH
Q 030956 75 PPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRT 149 (168)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~ 149 (168)
++...... .....+|.+...... . ....|..+++|++++++.++.+ .+..+.++..
T Consensus 106 ~~~~~~~~---------~~~~~~~~~~~~~~~--~-----~~~~E~~~~~W~~~~el~~~~~---~~~~~~~l~~ 161 (165)
T 3oga_A 106 ADGRQEEI---------YMIYLIFDCVSANRD--I-----CINDEFQDYAWVKPEELALYDL---NVATRHTLAL 161 (165)
T ss_dssp --CCEEEE---------EEEEEEEEEEESCCC--C-----CCCTTEEEEEEECGGGGGGSCB---CHHHHHHHHH
T ss_pred CCCCceeE---------EEEEEEEEeeccCCC--c-----cCCchheeeEEccHHHHhhCCC---CHHHHHHHHH
Confidence 33221100 011123333332221 1 1235889999999999999765 4455555543
No 23
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.83 E-value=1.2e-20 Score=130.47 Aligned_cols=118 Identities=23% Similarity=0.257 Sum_probs=72.8
Q ss_pred eeeeeEEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceee--eecCC-ceeecCCcccc
Q 030956 3 YAECSVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEII--AEVPN-WLTYDFPPAVK 79 (168)
Q Consensus 3 ~r~~~~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~--~~~~~-~~~~~~~~~~~ 79 (168)
.+.++++++++.+++|||++|. +|.|.+|||+++.||++.+||+||++||||+.+.... ..... ...+.+++...
T Consensus 20 ~~~~v~~ii~~~~~~vLL~~r~--~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (153)
T 3eds_A 20 FXPSVAAVIKNEQGEILFQYPG--GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGGKEYRYTYSNGDE 97 (153)
T ss_dssp EEEEEEEEEBCTTCCEEEECC-----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSGGGEEECTTSCE
T ss_pred EeeeEEEEEEcCCCeEEEEEcC--CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEecccceeeecCCCCe
Confidence 4455555555567899999888 6899999999999999999999999999999964322 11110 01233332211
Q ss_pred cccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCC
Q 030956 80 TKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYK 139 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~ 139 (168)
......+|.+........ ....|..+++|++++++.++..++.
T Consensus 98 -----------~~~~~~~f~~~~~~~~~~------~~~~E~~~~~W~~~~el~~l~~~~p 140 (153)
T 3eds_A 98 -----------VEYIVVVFECEVTSGELR------SIDGESLKLQYFSLSEKPPLALPYP 140 (153)
T ss_dssp -----------EEEEEEEEEEEEEEECCC-------------CEEEECGGGCCCBSSCCC
T ss_pred -----------EEEEEEEEEEEecCCccc------cCCCcEEEEEEECHHHCchhcccCc
Confidence 112245666665543221 1335888999999999999887653
No 24
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.83 E-value=7.9e-20 Score=125.75 Aligned_cols=122 Identities=25% Similarity=0.336 Sum_probs=84.9
Q ss_pred eeEEEEEeeCCcEEEEEecCC---CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccc
Q 030956 6 CSVLSMLIYLGQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKV 82 (168)
Q Consensus 6 ~~~~~v~~~~~~vLl~~r~~~---~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (168)
.++++++.++++|||++|... +|.|.+|||+++.||++.+||.||+.||||+.+..... +. ...+.+++..
T Consensus 23 ~~~~~i~~~~~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~-~~~~~~~~~~---- 96 (153)
T 3ees_A 23 PVVAGFLRKDGKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGEL-KL-ACTHSYGDVG---- 96 (153)
T ss_dssp EEEEEEEEETTEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCE-EE-EEEEEETTEE----
T ss_pred EEEEEEEEECCEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCce-EE-EEEEecCCCe----
Confidence 445566777899999999863 38999999999999999999999999999998643221 11 1234333321
Q ss_pred ccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHH
Q 030956 83 NRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 154 (168)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l 154 (168)
...++|.+...... ....|..+++|++++++.++.+ ....+.++..+..++
T Consensus 97 ----------~~~~~~~~~~~~~~--------~~~~e~~~~~W~~~~el~~~~~---~~~~~~~l~~~~~~~ 147 (153)
T 3ees_A 97 ----------ILILFYEILYWKGE--------PRAKHHMMLEWIHPEELKHRNI---PEANRKILHKIYKAL 147 (153)
T ss_dssp ----------EEEEEEEECEEESC--------CCCSSSSEEEEECGGGGGGSCC---CHHHHTTHHHHHHHT
T ss_pred ----------EEEEEEEEEECCCC--------cCCCccceEEEecHHHhhhCCC---CcchHHHHHHHHHhh
Confidence 11245555543322 1235788999999999999876 566667777766554
No 25
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.83 E-value=6.2e-20 Score=127.46 Aligned_cols=123 Identities=15% Similarity=0.199 Sum_probs=81.6
Q ss_pred eeEEEEEeeCCcEEEEEecCC--CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccc
Q 030956 6 CSVLSMLIYLGQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVN 83 (168)
Q Consensus 6 ~~~~~v~~~~~~vLl~~r~~~--~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (168)
.++.+++.++++|||++|.+. +|.|.+|||+++.||++.+||+||++||||+.+... ..+.. ..+.+.....
T Consensus 30 ~~v~~vi~~~~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~~-~~~~~~~~~~---- 103 (157)
T 4dyw_A 30 VGCGAAIVRDGRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERA-TLLCV-VDHIDAANGE---- 103 (157)
T ss_dssp EEEEEEEEETTEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESC-EEEEE-EEEEETTTTE----
T ss_pred eEEEEEEEECCEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccC-cEEEE-EEeeccCCCc----
Confidence 345556666899999999863 489999999999999999999999999999996432 22211 1222211110
Q ss_pred cccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHH
Q 030956 84 RLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 151 (168)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~ 151 (168)
.....+|.+........ . .+..|+.+++|++++++.+.+ .+..+.++..++
T Consensus 104 --------~~~~~~f~~~~~~~~~~--~---~~~~E~~~~~W~~~~el~~~l----~~~~~~~l~~l~ 154 (157)
T 4dyw_A 104 --------HWVAPVYLAHAFSGEPR--V---VEPDRHEALGWFALDDLPQPL----THATRIALEQVT 154 (157)
T ss_dssp --------EEEEEEEEESEEESCCC--C---SCTTTEEEEEEEETTSCCSSB----CHHHHHHHHHHC
T ss_pred --------EEEEEEEEEEEcCCCcc--c---CCCCcEeEEEEECHHHccccc----CHHHHHHHHHHH
Confidence 11234555555433221 1 233588999999999999855 456667776654
No 26
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.83 E-value=1.3e-19 Score=124.03 Aligned_cols=123 Identities=19% Similarity=0.182 Sum_probs=77.2
Q ss_pred eeEEEEEee-CCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccccc
Q 030956 6 CSVLSMLIY-LGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNR 84 (168)
Q Consensus 6 ~~~~~v~~~-~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (168)
.++++++.. +++|||++|+ +|.|.+|||+++.||++.+||+||++||||+.+... ..+.....+.++....
T Consensus 20 ~~~~vi~~~~~~~vLl~~r~--~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~~~~~~~~~~~~----- 91 (148)
T 2azw_A 20 AAYIIVSKPENNTMVLVQAP--NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIG-CYLGEADEYFYSNHRQ----- 91 (148)
T ss_dssp EEEEECEEGGGTEEEEEECT--TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEEEEEEEETTTT-----
T ss_pred EEEEEEECCCCCeEEEEEcC--CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEee-eEEEEEEEEEcCCCCC-----
Confidence 333334443 5899999985 489999999999999999999999999999996432 2222111111111100
Q ss_pred ccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHH
Q 030956 85 LWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 150 (168)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l 150 (168)
.......++|.+....... ....|..+++|++++++.++.. ....+.++..+
T Consensus 92 ----~~~~~~~~~~~~~~~~~~~-------~~~~e~~~~~W~~~~el~~~~~---~~~~~~~l~~~ 143 (148)
T 2azw_A 92 ----TAYYNPGYFYVANTWRQLS-------EPLERTNTLHWVAPEEAVRLLK---RGSHRWAVEKW 143 (148)
T ss_dssp ----EEEEEEEEEEEEEEEEECS-------SCC-CCSEEEEECHHHHHHHBS---CHHHHHHHHHH
T ss_pred ----cceEEEEEEEEEEcCcCCc-------CCCCceeeEEEeeHHHHHhhhc---chhHHHHHHHH
Confidence 0011224566666543221 1234678999999999999876 45555555544
No 27
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.82 E-value=4.9e-20 Score=127.88 Aligned_cols=123 Identities=15% Similarity=0.274 Sum_probs=80.5
Q ss_pred eeEEEEEeeCCcEEEEEecCC---CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccc
Q 030956 6 CSVLSMLIYLGQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKV 82 (168)
Q Consensus 6 ~~~~~v~~~~~~vLl~~r~~~---~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (168)
.++++++..+++|||++|... +|.|.+|||+++.||++.+||.||++||||+.+............+.+.+..
T Consensus 31 ~~~~~i~~~~~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~---- 106 (158)
T 3hhj_A 31 VVACALLDQDNRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGYETFH---- 106 (158)
T ss_dssp EEEEEEBCTTSEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSCE----
T ss_pred EEEEEEEeCCCEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeeccCCcE----
Confidence 445455566889999999853 4899999999999999999999999999999964321111111233333221
Q ss_pred ccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHH
Q 030956 83 NRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPY 153 (168)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~ 153 (168)
...++|.+...... ....|..+++|++++++.++.+ ....+.++..+..+
T Consensus 107 ----------~~~~~~~~~~~~~~--------~~~~e~~~~~W~~~~el~~~~~---~~~~~~il~~~~~~ 156 (158)
T 3hhj_A 107 ----------LLMPLYFCSHYKGV--------AQGREGQNLKWIFINDLDKYPM---PEADKPLVQVLKNF 156 (158)
T ss_dssp ----------EEEEEEEESCCBSC--------CCCTTSCEEEEEEGGGGGGSCC---CTTTHHHHHHHHHC
T ss_pred ----------EEEEEEEEEECCCc--------cCCccccceEEEcHHHHhhCCC---CcchHHHHHHHHHh
Confidence 11234444333221 1235788999999999998876 34455566655443
No 28
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.82 E-value=3.7e-19 Score=125.95 Aligned_cols=124 Identities=19% Similarity=0.275 Sum_probs=78.7
Q ss_pred eeeeeEEEEEeeCCcEEEEEecCC----CCcEEc-CccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcc
Q 030956 3 YAECSVLSMLIYLGQIFVASRLNV----PGAWQM-PQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPA 77 (168)
Q Consensus 3 ~r~~~~~~v~~~~~~vLl~~r~~~----~g~w~l-P~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~ 77 (168)
+++++.+++++.++++||.+|+.. +|.|.+ |||+++.||++.+||+||++||||+.+..+..... ..+.....
T Consensus 36 ~~~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~--~~~~~~~~ 113 (180)
T 2fkb_A 36 RHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQ--FYFEDKNC 113 (180)
T ss_dssp CEEEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEEEEE--EEEEETTE
T ss_pred eeeEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEEEEE--EEecCCCc
Confidence 344545555566789999998752 588999 99999999999999999999999998543322211 11211110
Q ss_pred cccccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHH
Q 030956 78 VKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 150 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l 150 (168)
....++|.+... . ... .+..|+.+++|++++++.+++.+.. +....++..+
T Consensus 114 --------------~~~~~~f~~~~~-~--~~~----~~~~E~~~~~W~~~~el~~~~~~~~-~~~~~~l~~~ 164 (180)
T 2fkb_A 114 --------------RVWGALFSCVSH-G--PFA----LQEDEVSEVCWLTPEEITARCDEFT-PDSLKALALW 164 (180)
T ss_dssp --------------EEEEEEEEEECC-C--CCC----CCTTTEEEEEEECHHHHHTTGGGBC-HHHHHHHHHH
T ss_pred --------------eEEEEEEEEecC-C--CcC----CChhHhheEEEecHHHHHHHHHHhC-CcHHHHHHHH
Confidence 112355655521 1 111 1345889999999999999853222 3334444443
No 29
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.82 E-value=6.2e-20 Score=128.94 Aligned_cols=114 Identities=20% Similarity=0.239 Sum_probs=73.8
Q ss_pred eeEEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccc
Q 030956 6 CSVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRL 85 (168)
Q Consensus 6 ~~~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (168)
..+.+++.++++|||++|...+|.|.+|||+++.||++.+||+||++||||+.+. ....+.. ..+.+....
T Consensus 24 ~~v~~ii~~~~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~-~~~~~~~~~------- 94 (171)
T 3id9_A 24 VRVTGILIEDEKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVK-IKKLLYV-CDKPDASPS------- 94 (171)
T ss_dssp EEEEEEEEETTEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEE-EEEEEEE-EEETTSSSC-------
T ss_pred EEEEEEEEECCEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccc-cceEEEE-EcccCCCCc-------
Confidence 3455666778999999998756899999999999999999999999999999963 2222221 222221111
Q ss_pred cCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcc
Q 030956 86 WGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAV 136 (168)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 136 (168)
....+|.+........... ...+..|..+++|++++++.++.+
T Consensus 95 -------~~~~~~~~~~~~~~~~~~~-~~~~~~E~~~~~w~~~~el~~~~~ 137 (171)
T 3id9_A 95 -------LLHITFLLERIEGEITLPS-NEFDHNPIHDVQMVPINELSYYGF 137 (171)
T ss_dssp -------EEEEEEEEEEC--------------CCCCCEEEEETGGGGGGTC
T ss_pred -------EEEEEEEEEEcCCcccCCc-cCCCcCeeeeEEEEeHHHHhhCCC
Confidence 1124555555433322111 112346889999999999999865
No 30
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.82 E-value=8.2e-20 Score=126.65 Aligned_cols=52 Identities=33% Similarity=0.525 Sum_probs=46.2
Q ss_pred EEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccc
Q 030956 8 VLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 60 (168)
Q Consensus 8 ~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~ 60 (168)
+.+++.++++|||++|+. +|.|.+|||+++.|||+.+||.||++||||+.+.
T Consensus 4 ~~~vi~~~~~vLL~~r~~-~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 55 (156)
T 1k2e_A 4 TSGVLVENGKVLLVKHKR-LGVYIYPGGHVEHNETPIEAVKREFEEETGIVVE 55 (156)
T ss_dssp EEEECEETTEEEEEECTT-TCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEE
T ss_pred EEEEEEECCEEEEEEEcC-CCcEECCeeecCCCCCHHHHHHHHHHHHHCCcce
Confidence 445555689999999886 6899999999999999999999999999999964
No 31
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.82 E-value=5.4e-20 Score=133.20 Aligned_cols=126 Identities=15% Similarity=0.267 Sum_probs=79.7
Q ss_pred eEEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCcee--ecCCccccccccc
Q 030956 7 SVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLT--YDFPPAVKTKVNR 84 (168)
Q Consensus 7 ~~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 84 (168)
++.+++.++++|||++|+. +|.|.+|||+++.|||+.+||.||++||||+.+... ..+..... +.++...
T Consensus 70 ~v~~vv~~~~~vLLv~r~~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~-~~l~~~~~~~~~~~~~~------ 141 (205)
T 3q1p_A 70 DIRAVVFQNEKLLFVKEKS-DGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHF-KLLAIFDKEKHQPSPSA------ 141 (205)
T ss_dssp EEEEEEEETTEEEEEEC----CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEEEHHHHSCCCCS------
T ss_pred eEEEEEEECCEEEEEEEcC-CCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccc-eEEEEEeccccCCCCCC------
Confidence 3445566789999999885 589999999999999999999999999999996422 22221111 1111111
Q ss_pred ccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHhh
Q 030956 85 LWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 156 (168)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~~ 156 (168)
......+|.+....... ....|+.+++|++++++.++... ......+..+..++..
T Consensus 142 ------~~~~~~~~~~~~~~~~~-------~~~~E~~~~~w~~~~el~~l~~~---~~~~~~i~~~~~~~~~ 197 (205)
T 3q1p_A 142 ------THVYKIFIGCEIIGGEK-------KTSIETEEVEFFGENELPNLSIA---RNTEDQIKEMFAYMKD 197 (205)
T ss_dssp ------SCEEEEEEEEEEEEECC-------CCCTTSCCEEEECTTSCCCBCTT---TCCHHHHHHHHHHHHC
T ss_pred ------ceEEEEEEEEEecCCcc-------CCCCcceEEEEEeHHHhhhcCCC---ccHHHHHHHHHHHHhC
Confidence 11223566776654322 12358999999999999987753 2333444444444433
No 32
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.81 E-value=2e-19 Score=127.23 Aligned_cols=113 Identities=14% Similarity=0.216 Sum_probs=75.2
Q ss_pred ceeeeeEEEEEeeCCcEEEEEecCC--CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccc
Q 030956 2 IYAECSVLSMLIYLGQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVK 79 (168)
Q Consensus 2 ~~r~~~~~~v~~~~~~vLl~~r~~~--~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~ 79 (168)
-.++.++++++.++++|||++|.+. +|.|.+|||+++.||++.+||+||++||||+.+..+..... ..+.+.....
T Consensus 22 ~~~~~~~~~vi~~~~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~--~~~~~~~~~~ 99 (176)
T 3q93_A 22 GASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQ--IVFEFVGEPE 99 (176)
T ss_dssp -CEEEEEEEEEECSSEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEEEE--EEEEETTCSC
T ss_pred CCCcEEEEEEEEeCCEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEEEE--EEEEcCCCCc
Confidence 3456667777888899999998763 48999999999999999999999999999999643322211 1222221110
Q ss_pred cccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcc
Q 030956 80 TKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAV 136 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 136 (168)
....++|.+...... . ...|..+++|++++++.++.+
T Consensus 100 ------------~~~~~~f~~~~~~~~--~------~~~e~~~~~W~~~~el~~~~~ 136 (176)
T 3q93_A 100 ------------LMDVHVFCTDSIQGT--P------VESDEMRPCWFQLDQIPFKDM 136 (176)
T ss_dssp ------------EEEEEEEEESCEESC--C------CCCSSEEEEEEETTCCCGGGB
T ss_pred ------------EEEEEEEEEECCCCC--c------CCCcceeeEEeeHHHcccccc
Confidence 111244444332221 1 123567789999999998765
No 33
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.81 E-value=2.9e-19 Score=126.81 Aligned_cols=113 Identities=22% Similarity=0.250 Sum_probs=74.4
Q ss_pred eeEEEEEeeCCcEEEEEecCC---CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccc
Q 030956 6 CSVLSMLIYLGQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKV 82 (168)
Q Consensus 6 ~~~~~v~~~~~~vLl~~r~~~---~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (168)
+++++++..++++||++|+.. +|.|.+|||+++.|||+.+||+||++||||+.+..+. .+... .+ ....
T Consensus 43 ~v~v~i~~~~~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~l~~~-~~--~~~~---- 114 (182)
T 2yvp_A 43 ASFVLPVTERGTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLI-PLPSF-HP--QPSF---- 114 (182)
T ss_dssp EEEEEEBCTTSEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEE-ECCCB-CS--CTTT----
T ss_pred EEEEEEEcCCCEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEE-EEEEE-eC--CCCc----
Confidence 444444556889999998752 4789999999999999999999999999999965332 22221 11 1110
Q ss_pred ccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccC
Q 030956 83 NRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDY 138 (168)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~ 138 (168)
.....++|.+.......... .+..|..+++|++++++.+++...
T Consensus 115 --------~~~~~~~f~~~~~~~~~~~~----~~~~E~~~~~W~~~~el~~~~~~~ 158 (182)
T 2yvp_A 115 --------TAVVFHPFLALKARVVTPPT----LEEGELLESLELPLTEVYALLAKG 158 (182)
T ss_dssp --------BCCEEEEEEECSCEECSCCC----CCTTCCEEEEEEEHHHHHHHHHTT
T ss_pred --------cccEEEEEEEeccccCCCCC----CCCCceEEEEEEEHHHHHHHHHcC
Confidence 01223555555322111111 244688999999999999988543
No 34
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.81 E-value=4.4e-20 Score=123.54 Aligned_cols=110 Identities=25% Similarity=0.340 Sum_probs=76.7
Q ss_pred eeeeeEEEEEeeCCcEEEEEecCC---CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccc
Q 030956 3 YAECSVLSMLIYLGQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVK 79 (168)
Q Consensus 3 ~r~~~~~~v~~~~~~vLl~~r~~~---~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~ 79 (168)
..+.++++++.+++++|+++|+.. +|.|.+|||+++.||++.+||.||++||||+.+... ..+.. ..+.+++..
T Consensus 3 ~~~~~~~ii~~~~~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~-~~~~~-~~~~~~~~~- 79 (129)
T 1mut_A 3 KLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHF-SLFEK-LEYEFPDRH- 79 (129)
T ss_dssp EEECCCEECEETTTEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEE-CCCCC-CBCCCSSCE-
T ss_pred eEEEEEEEEEecCCEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccc-eEEEE-EEEecCCce-
Confidence 345555566677899999999864 489999999999999999999999999999996432 22221 233333221
Q ss_pred cccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcc
Q 030956 80 TKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAV 136 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 136 (168)
...++|.+....... ...|..+++|++++++.++.+
T Consensus 80 -------------~~~~~~~~~~~~~~~--------~~~e~~~~~W~~~~el~~~~~ 115 (129)
T 1mut_A 80 -------------ITLWFWLVERWEGEP--------WGKEGQPGEWMSLVGLNADDF 115 (129)
T ss_dssp -------------EECCCEEEEECSSCC--------CCCSSCCCEEEESSSCCTTTS
T ss_pred -------------EEEEEEEEEccCCcc--------CCcccceeEEeCHHHcccccC
Confidence 112456666543211 224778899999999998766
No 35
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.81 E-value=6.2e-19 Score=126.99 Aligned_cols=123 Identities=24% Similarity=0.312 Sum_probs=78.5
Q ss_pred EEEEee-CCcEEEEEecCC-CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccccccc
Q 030956 9 LSMLIY-LGQIFVASRLNV-PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLW 86 (168)
Q Consensus 9 ~~v~~~-~~~vLl~~r~~~-~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (168)
++++.. +++||+++|+.. +|.|.+|||+++.||++.+||+||++||||+.+. ....+.....+.++...
T Consensus 31 ~~v~~~~~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~-~~~l~~~~~~~~~~~~~-------- 101 (199)
T 3h95_A 31 GAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSE-FRSVLSIRQQHTNPGAF-------- 101 (199)
T ss_dssp EEEEETTTTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEE-EEEEEEEEECC--------------
T ss_pred EEEEeCCCCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccc-cceEEEEEeeecCCCCc--------
Confidence 344443 579999998752 4899999999999999999999999999999964 32322221112222211
Q ss_pred CCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHH
Q 030956 87 GGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 151 (168)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~ 151 (168)
.....+|.+.+......... +..|+.+++|++++++.++... .+..+.++..+.
T Consensus 102 -----~~~~~~~~~~~~~~~~~~~~----~~~E~~~~~W~~~~el~~~~~~--~~~~~~~~~~~~ 155 (199)
T 3h95_A 102 -----GKSDMYIICRLKPYSFTINF----CQEECLRCEWMDLNDLAKTENT--TPITSRVARLLL 155 (199)
T ss_dssp --------CEEEEEEEEESCCCCCC----CTTTEEEEEEEEHHHHHHCSSB--CHHHHHHHHHHH
T ss_pred -----eeEEEEEEEEEcCCCcccCC----CccceeeeEEEeHHHHhhhhhc--ChHHHHHHHHHH
Confidence 11235667766544332222 3468999999999999987642 445555544443
No 36
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.81 E-value=3.3e-19 Score=120.96 Aligned_cols=117 Identities=25% Similarity=0.369 Sum_probs=77.7
Q ss_pred eEEEEEeeCCcEEEEEecCC---CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccc
Q 030956 7 SVLSMLIYLGQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVN 83 (168)
Q Consensus 7 ~~~~v~~~~~~vLl~~r~~~---~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (168)
++++++.+++++||++|+.. +|.|.+|||+++.||++.+||.||++||||+.+... ..+. ...+.+++..
T Consensus 11 ~~~~ii~~~~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~-~~~~~~~~~~----- 83 (140)
T 2rrk_A 11 VVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVG-EYVA-SHQREVSGRI----- 83 (140)
T ss_dssp EEEEEEEETTEEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECC-EEEE-EEEEEETTEE-----
T ss_pred EEEEEEEcCCEEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecc-cEEE-EEEEecCCcE-----
Confidence 34456678899999999753 489999999999999999999999999999986432 2221 1233333211
Q ss_pred cccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHH
Q 030956 84 RLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 150 (168)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l 150 (168)
...++|.+...... . ...|+.+++|++++++.++.++ .....++..+
T Consensus 84 ---------~~~~~~~~~~~~~~----~----~~~e~~~~~W~~~~el~~~~~~---~~~~~~l~~~ 130 (140)
T 2rrk_A 84 ---------IHLHAWHVPDFHGT----L----QAHEHQALVWCSPEEALQYPLA---PADIPLLEAF 130 (140)
T ss_dssp ---------EEEEEEEESEEEEC----C----CCSSCSCEEEECHHHHTTSCCC---TTHHHHHHHH
T ss_pred ---------EEEEEEEEEeeCCC----c----CCCccceeEEeCHHHHhhCCCC---hhHHHHHHHH
Confidence 11245555443221 1 2246788999999999998763 3334455444
No 37
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.81 E-value=2.2e-19 Score=134.84 Aligned_cols=122 Identities=16% Similarity=0.223 Sum_probs=86.4
Q ss_pred EEEEEeeCCcEEEEEecCC-CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccccccc
Q 030956 8 VLSMLIYLGQIFVASRLNV-PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLW 86 (168)
Q Consensus 8 ~~~v~~~~~~vLl~~r~~~-~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (168)
+++++.++++|||++|... +|.|.+|||+++.|||+++||+||++||||+.+..+..... ..+.+++.
T Consensus 143 viv~v~~~~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~--~~~~~~~~--------- 211 (269)
T 1vk6_A 143 IIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS--QPWPFPQS--------- 211 (269)
T ss_dssp EEEEEEETTEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEEEEE--EEEETTEE---------
T ss_pred EEEEEEeCCEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEEEEE--EecCCCCE---------
Confidence 4455667899999999865 38999999999999999999999999999999754322222 12333322
Q ss_pred CCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHh
Q 030956 87 GGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 155 (168)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~ 155 (168)
...+|.+.+...... . +..|..+++|++++++..+..+ ..+.+.+++.....+.
T Consensus 212 -------~~~~f~a~~~~~~~~--~----~~~E~~~~~W~~~~el~~l~~~--~si~~~li~~~l~~~r 265 (269)
T 1vk6_A 212 -------LMTAFMAEYDSGDIV--I----DPKELLEANWYRYDDLPLLPPP--GTVARRLIEDTVAMCR 265 (269)
T ss_dssp -------EEEEEEEEEEECCCC--C----CTTTEEEEEEEETTSCCSCCCT--TSHHHHHHHHHHHHHH
T ss_pred -------EEEEEEEEECCCCcC--C----CCcceEEEEEEEHHHhhhcccC--cHHHHHHHHHHHHHHH
Confidence 235677766543221 1 3358899999999999886543 4566677776655554
No 38
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.80 E-value=1.5e-19 Score=130.92 Aligned_cols=125 Identities=14% Similarity=0.180 Sum_probs=81.4
Q ss_pred eEEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCce--eecCCccccccccc
Q 030956 7 SVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWL--TYDFPPAVKTKVNR 84 (168)
Q Consensus 7 ~~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 84 (168)
++.+++.++++|||++|+ +|.|.+|||+++.|||+.+||+||++||||+.+... ..+.... .+.++...
T Consensus 72 ~v~~vv~~~~~vLLvrr~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~l~~~~~~~~~~~~~~------ 142 (206)
T 3o8s_A 72 DTRAAIFQEDKILLVQEN--DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQ-RVVAILDKHKNNPAKSA------ 142 (206)
T ss_dssp EEEEEEEETTEEEEEECT--TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEE-EEEEEEEHHHHCC----------
T ss_pred cEEEEEEECCEEEEEEec--CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceee-eEEEEEeccccCCCCCC------
Confidence 444566668999999998 589999999999999999999999999999986432 2111110 11111111
Q ss_pred ccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHhh
Q 030956 85 LWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 156 (168)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~~ 156 (168)
......+|.+....... ....|..+++|++++++.++.. ......++..+..++..
T Consensus 143 ------~~~~~~~~~~~~~~~~~-------~~~~E~~~~~w~~~~el~~l~~---~~~~~~~l~~~~~~~~~ 198 (206)
T 3o8s_A 143 ------HRVTKVFILCRLLGGEF-------QPNSETVASGFFSLDDLPPLYL---GKNTAEQLALCLEASRS 198 (206)
T ss_dssp -------CEEEEEEEEEEEEECC-------CCCSSCSEEEEECTTSCCCBCT---TTCCHHHHHHHHHHHHC
T ss_pred ------ceEEEEEEEEEecCCee-------cCCCCceEEEEEeHHHhhhccC---CCchHHHHHHHHHHHHC
Confidence 11223566666654322 1225899999999999998876 23334445555444443
No 39
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.80 E-value=1.3e-19 Score=125.09 Aligned_cols=120 Identities=14% Similarity=0.197 Sum_probs=77.4
Q ss_pred EEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccccC
Q 030956 8 VLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWG 87 (168)
Q Consensus 8 ~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (168)
+.+++.++++|||++| +|.|.+|||+++.||++.+||+||++||||+.+... ..+. ...+.+....
T Consensus 22 ~~~ii~~~~~vLl~~r---~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~~~-~~~~~~~~~~--------- 87 (154)
T 2pqv_A 22 ATALIVQNHKLLVTKD---KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAG-QLAF-VVENRFEVDG--------- 87 (154)
T ss_dssp EEECCEETTEEEEEEE---TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEE-EEEE-EEEEEEEETT---------
T ss_pred EEEEEEECCEEEEEec---CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeec-eEEE-EEeeeecCCC---------
Confidence 4455567899999999 589999999999999999999999999999996422 1111 1122221110
Q ss_pred CccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHH
Q 030956 88 GEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMR 148 (168)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~ 148 (168)
.......++|.+......... . .+..|..+++|++++++.++.+. +...+.++.
T Consensus 88 -~~~~~~~~~f~~~~~~~~~~~-~---~~~~e~~~~~W~~~~el~~~~~~--~~~~~~~l~ 141 (154)
T 2pqv_A 88 -VSYHNIEFHYLVDLLEDAPLT-M---QEDEKRQPCEWIDLDKLQNIQLV--PVFLKTALP 141 (154)
T ss_dssp -EEEEEEEEEEEEEESSCCCSE-E---EETTEEEEEEEEEGGGGGGSCEE--STTHHHHTT
T ss_pred -CcceEEEEEEEEEecCCCCcc-c---CCCCceeeEEEeEHHHHhhcCcC--cHHHHHHhh
Confidence 000112356767664432110 1 13347889999999999987653 455555544
No 40
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.80 E-value=4.8e-19 Score=122.81 Aligned_cols=129 Identities=12% Similarity=0.147 Sum_probs=77.3
Q ss_pred eeEEEEEeeCCcEEEEEecCC--CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccc-eeeeecCCceeecCCccccccc
Q 030956 6 CSVLSMLIYLGQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA-EIIAEVPNWLTYDFPPAVKTKV 82 (168)
Q Consensus 6 ~~~~~v~~~~~~vLl~~r~~~--~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~-~~~~~~~~~~~~~~~~~~~~~~ 82 (168)
++.++++..+++|||++|++. +|.|.+|||+++.||++.+||+||++||||+.+. .....+. ...+.+++.....
T Consensus 20 ~v~~vi~~~~~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~-~~~~~~~~~~~~~- 97 (160)
T 1rya_A 20 SLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYG-VWQHFYDDNFSGT- 97 (160)
T ss_dssp EEEEEEECTTSCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEE-EEEEEESSBTTBS-
T ss_pred EEEEEEEcCCCEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEE-EEeEEEcccccCC-
Confidence 333344444889999999864 4899999999999999999999999999999842 1111111 1222222210000
Q ss_pred ccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHH
Q 030956 83 NRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRT 149 (168)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~ 149 (168)
........++|.+...... .. .+..|+.+++|++++++.++... .+..+.++..
T Consensus 98 -----~~~~~~~~~~f~~~~~~~~--~~----~~~~e~~~~~W~~~~el~~~~~~--~~~~~~~l~~ 151 (160)
T 1rya_A 98 -----DFTTHYVVLGFRFRVSEEE--LL----LPDEQHDDYRWLTSDALLASDNV--HANSRAYFLA 151 (160)
T ss_dssp -----SSCEEEEEEEEEEECCGGG--CC----CCSSSEEEEEEECHHHHHHCTTB--CHHHHGGGCH
T ss_pred -----CcCcEEEEEEEEEEcCccc--cc----cCCCccceEEEecHHHHhhcccc--CHHHHHHHHH
Confidence 0000112345555554321 11 13458899999999999986432 3444444443
No 41
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.80 E-value=1.9e-19 Score=128.48 Aligned_cols=124 Identities=19% Similarity=0.184 Sum_probs=75.6
Q ss_pred CCcEEEEEec---------CCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccc
Q 030956 15 LGQIFVASRL---------NVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRL 85 (168)
Q Consensus 15 ~~~vLl~~r~---------~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (168)
+++|||++|. ..+|.|.+|||+++.||++.+||+||++||||+.+..+. .+.. ..+......
T Consensus 45 ~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~l~~-~~~~~~~~~------- 115 (187)
T 3i9x_A 45 TLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTDIPLI-PFGV-FDKPGRDPR------- 115 (187)
T ss_dssp EEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCSCCCE-EEEE-ECCTTSSTT-------
T ss_pred CCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCCcceE-EEEE-EcCCccCCC-------
Confidence 3589999993 235899999999999999999999999999999864322 2211 111111000
Q ss_pred cCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcc-cCChHHHHHHHHHHHHHHhh
Q 030956 86 WGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAV-DYKRPTYEEVMRTFRPYLNE 156 (168)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~-~~~~~~~~~~l~~l~~~l~~ 156 (168)
+ .....+|.+.+........ ....|+.+++|++++++.++.. ......+..+++.++..+..
T Consensus 116 --~---~~~~~~~~~~~~~~~~~~~----~~~~E~~~~~W~~~~el~~~~l~~~~~~il~~a~~~l~~~~~~ 178 (187)
T 3i9x_A 116 --G---WIISRAFYAIVPPEALEKR----AAGDDAAEIGLFPMTEALELPLAFDHLDMLKKAFSAITEEFLL 178 (187)
T ss_dssp --S---SEEEEEEEEECCHHHHHHH----HHSTTTTTEEEEEHHHHTTSCBSTTHHHHHHHHHHHHHHHHHT
T ss_pred --C---CEEEEEEEEEEcCcccCCc----CCCCceeEEEEEeHHHcccCCCCccHHHHHHHHHHHHHhhhhc
Confidence 0 1112344444433211111 1235788999999999997643 33345555555555554443
No 42
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.79 E-value=5.7e-19 Score=127.95 Aligned_cols=112 Identities=19% Similarity=0.280 Sum_probs=70.5
Q ss_pred EEEEEeeCCcEEEEEecCC---CCcEEcCccccC-CCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccc
Q 030956 8 VLSMLIYLGQIFVASRLNV---PGAWQMPQGGIE-DGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVN 83 (168)
Q Consensus 8 ~~~v~~~~~~vLl~~r~~~---~g~w~lP~G~ie-~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (168)
++++++.++++||++++.. ++.|.+|||+++ .||++.+||+||++||||+.+..+... ... +.++...
T Consensus 47 ~v~i~~~~~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~l-~~~--~~~~~~~----- 118 (207)
T 1mk1_A 47 AIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVL-VDL--DTAPGFS----- 118 (207)
T ss_dssp EEEECCTTSEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEEE-EEE--CSCTTTB-----
T ss_pred EEEEEcCCCEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEEE-EEE--EcCCCcc-----
Confidence 3334446889999998753 368999999999 999999999999999999996543222 111 2222111
Q ss_pred cccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccC
Q 030956 84 RLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDY 138 (168)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~ 138 (168)
....++|.+.......... ..+..|+.+++|++++++.+++...
T Consensus 119 --------~~~~~~f~~~~~~~~~~~~---~~~~~E~~~~~Wv~~~el~~~~~~~ 162 (207)
T 1mk1_A 119 --------DESVRVYLATGLREVGRPE---AHHEEADMTMGWYPIAEAARRVLRG 162 (207)
T ss_dssp --------CCCEEEEEEEEEEECCC-------------CEEEEEHHHHHHHHHTT
T ss_pred --------ccEEEEEEEEccccCCCCC---CCCCCceEEEEEEEHHHHHHHHHcC
Confidence 1124667776543221110 0234588999999999999988654
No 43
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.79 E-value=5.1e-19 Score=124.28 Aligned_cols=109 Identities=27% Similarity=0.403 Sum_probs=69.3
Q ss_pred EEEEEeeCCcEEEEEecCC---CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccccc
Q 030956 8 VLSMLIYLGQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNR 84 (168)
Q Consensus 8 ~~~v~~~~~~vLl~~r~~~---~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (168)
+.+++.+++++||+++++. +|.|.+|||+++.|||+.+||.||++||||+ +..+...... +..+ ..
T Consensus 37 v~vii~~~~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~~---~~~~-~~------ 105 (170)
T 1v8y_A 37 VAVIALREGRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYLFSY---FVSP-GF------ 105 (170)
T ss_dssp EEEEEEETTEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEEEEE---ESCT-TT------
T ss_pred EEEEEEECCEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceeeEEE---ecCC-Cc------
Confidence 3344444899999987652 4789999999999999999999999999999 6543222111 1111 11
Q ss_pred ccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccC
Q 030956 85 LWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDY 138 (168)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~ 138 (168)
.....++|.+....... .. .+..|..+++|++++++.+++...
T Consensus 106 ------~~~~~~~f~~~~~~~~~-~~----~~~~E~~~~~W~~~~el~~~~~~~ 148 (170)
T 1v8y_A 106 ------TDEKTHVFLAENLKEVE-AH----PDEDEAIEVVWMRPEEALERHQRG 148 (170)
T ss_dssp ------BCCEEEEEEEEEEEECC-------------CEEEEECHHHHHHHHHTT
T ss_pred ------cccEEEEEEEEeccccC-CC----CCCCceEEEEEEEHHHHHHHHHCC
Confidence 01234567666543211 11 134588999999999999988643
No 44
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.79 E-value=9.9e-19 Score=118.72 Aligned_cols=100 Identities=22% Similarity=0.156 Sum_probs=68.5
Q ss_pred CCc--EEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccccCCcccc
Q 030956 15 LGQ--IFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHG 92 (168)
Q Consensus 15 ~~~--vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (168)
+++ +||++|+..++.|.+|||+++.|||+.+||+||++||||+.+... ..+.. ..+...... ..
T Consensus 22 ~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~-~~~~~~~~~------------~~ 87 (139)
T 2yyh_A 22 ENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLH-KLMGV-YSDPERDPR------------AH 87 (139)
T ss_dssp TEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEE-EEEEE-ECCTTSCTT------------SC
T ss_pred CCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccc-eEEEE-ECCCCcCCC------------ce
Confidence 677 999999876666999999999999999999999999999996422 22211 111111100 11
Q ss_pred ceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHH--hhcc
Q 030956 93 QAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVV--EQAV 136 (168)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~--~~~~ 136 (168)
...++|.+... ... ....|..+++|++++++. ++..
T Consensus 88 ~~~~~f~~~~~-~~~-------~~~~e~~~~~W~~~~el~~~~l~~ 125 (139)
T 2yyh_A 88 VVSVVWIGDAQ-GEP-------KAGSDAKKVKVYRLEEIPLDKLVF 125 (139)
T ss_dssp EEEEEEEEEEE-SCC-------CCCTTEEEEEEECTTSCCGGGBCT
T ss_pred EEEEEEEEecC-Ccc-------CCCCCcceEEEEEHHHCCHhhcCC
Confidence 23456777762 211 134588999999999999 5543
No 45
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.79 E-value=4.9e-19 Score=126.54 Aligned_cols=122 Identities=18% Similarity=0.194 Sum_probs=76.1
Q ss_pred eEEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccccccc
Q 030956 7 SVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLW 86 (168)
Q Consensus 7 ~~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (168)
++++++.++++|||++|+. +|.|.+|||+++.||++.+||+||++||||+.+...... + ...+.+......
T Consensus 6 v~~~vi~~~~~vLL~~r~~-~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~-~-~~~~~~~~~~~~------ 76 (188)
T 3fk9_A 6 VTNCIVVDHDQVLLLQKPR-RGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELK-G-IFSMVIFDEGKI------ 76 (188)
T ss_dssp EEEEEEEETTEEEEEECTT-TCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEE-E-EEEEEEEETTEE------
T ss_pred EEEEEEEECCEEEEEEeCC-CCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEE-E-EEEEEecCCCcc------
Confidence 3455666789999999876 689999999999999999999999999999986432111 1 112222111100
Q ss_pred CCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHH
Q 030956 87 GGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 150 (168)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l 150 (168)
......++|.+....... ....|..+++|++++++.++.+ ....+.++..+
T Consensus 77 ---~~~~~~~~f~a~~~~~~~-------~~~~e~~~~~W~~~~el~~~~l---~~~~~~~l~~~ 127 (188)
T 3fk9_A 77 ---VSEWMLFTFKATEHEGEM-------LKQSPEGKLEWKKKDEVLELPM---AAGDKWIFKHV 127 (188)
T ss_dssp ---EEEEEEEEEEESCEESCC-------CSEETTEEEEEEEGGGGGGSCC---CHHHHHHHHHH
T ss_pred ---eEEEEEEEEEEECCCCCC-------cCCCCCEeEEEEEHHHhhhCCC---CHHHHHHHHHH
Confidence 000012334443222211 1223557899999999998765 34455555554
No 46
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.79 E-value=7.9e-19 Score=125.75 Aligned_cols=105 Identities=14% Similarity=0.152 Sum_probs=68.6
Q ss_pred CCcEEEEEecC---------CCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccc
Q 030956 15 LGQIFVASRLN---------VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRL 85 (168)
Q Consensus 15 ~~~vLl~~r~~---------~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (168)
++++||+++.+ .++.|++|||+++ ||++.+||+||++||||+.+..+.....+ +..+. .
T Consensus 57 ~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~~l~~~---~~~~~-~------- 124 (191)
T 3o6z_A 57 KKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRKLFEL---YMSPG-G------- 124 (191)
T ss_dssp TTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEEEEEEE---ESCTT-T-------
T ss_pred CCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEEEEEEE---EeCCC-c-------
Confidence 58999998874 4578999999999 99999999999999999996443322221 11111 1
Q ss_pred cCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccC
Q 030956 86 WGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDY 138 (168)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~ 138 (168)
.....++|.+....... ..... ....|..+++|+|++++.+++.+.
T Consensus 125 -----~~~~~~~f~~~~~~~~~-~~~~~-~~~~E~~~~~w~~~~el~~~~~~g 170 (191)
T 3o6z_A 125 -----VTELIHFFIAEYSDNQR-ANAGG-GVEDEAIEVLELPFSQALEMIKTG 170 (191)
T ss_dssp -----BCCEEEEEEEECCTTCC----------CCSSEEEEEEHHHHHHHHHHS
T ss_pred -----cCcEEEEEEEEEccccc-ccCCC-CCCCcEEEEEEEEHHHHHHHHHcC
Confidence 12234667776653211 11000 125689999999999999988543
No 47
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.79 E-value=3.5e-19 Score=129.33 Aligned_cols=116 Identities=15% Similarity=0.137 Sum_probs=73.1
Q ss_pred eeEEEEEee--CCcEEEEEecCC--------CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCC
Q 030956 6 CSVLSMLIY--LGQIFVASRLNV--------PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 75 (168)
Q Consensus 6 ~~~~~v~~~--~~~vLl~~r~~~--------~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~ 75 (168)
.++++++.+ +++|||+++.+. ++.|++|||+++.||++.+||.||++||||+.+..+.....+ +..+
T Consensus 58 ~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~l~~~---~~~~ 134 (209)
T 1g0s_A 58 HAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSF---LASP 134 (209)
T ss_dssp CEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEEEEEE---ESCT
T ss_pred CEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEEeEEE---ecCC
Confidence 334444443 688999887642 357999999999999999999999999999996544332221 1111
Q ss_pred cccccccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccC
Q 030956 76 PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDY 138 (168)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~ 138 (168)
... ....++|.+.......... ....+..|..++.|+|++++.+++.+.
T Consensus 135 g~~-------------~~~~~~f~a~~~~~~~~~~-~~~~~e~E~~~~~w~~~~el~~~i~~g 183 (209)
T 1g0s_A 135 GGT-------------SERSSIMVGEVDATTASGI-HGLADENEDIRVHVVSREQAYQWVEEG 183 (209)
T ss_dssp TTB-------------CCEEEEEEEECCGGGCC---------CCSCEEEEEEHHHHHHHHHTT
T ss_pred Ccc-------------CcEEEEEEEEEccccccCC-CCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 111 1234667776533211100 001244578899999999999988654
No 48
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.79 E-value=9.8e-19 Score=121.84 Aligned_cols=120 Identities=17% Similarity=0.239 Sum_probs=75.4
Q ss_pred eEEEEEeeC--CcEEEEEecCC--CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccc
Q 030956 7 SVLSMLIYL--GQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKV 82 (168)
Q Consensus 7 ~~~~v~~~~--~~vLl~~r~~~--~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (168)
++.+++.++ ++|||++|... .|.|.+|||+++.||++.+||+||++||||+.+..... +.. ..+.+.....
T Consensus 12 ~v~~vi~~~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~-~~~~~~~~~~--- 86 (161)
T 3exq_A 12 VTMVMVTDPETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTF-CGT-CEWFDDDRQH--- 86 (161)
T ss_dssp EEEEEEBCTTTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEE-EEE-EEEECSSCSS---
T ss_pred EEEEEEEeCCCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcE-EEE-EecccCCCCe---
Confidence 344555554 49999998863 26799999999999999999999999999999643321 111 2222211110
Q ss_pred ccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHH
Q 030956 83 NRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 151 (168)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~ 151 (168)
....++|.+...... . ...|..+++|++++++.++.. ....++++..+.
T Consensus 87 ---------~~~~~~~~~~~~~~~--~------~~~e~~~~~W~~~~el~~~~~---~~~~~~~l~~~~ 135 (161)
T 3exq_A 87 ---------RKLGLLYRASNFTGT--L------KASAEGQLSWLPITALTRENS---AASLPEFLQVFT 135 (161)
T ss_dssp ---------EEEEEEEEECCEESC--C------CGGGTTTEEEECGGGCCTTTB---CTTHHHHHHHHT
T ss_pred ---------EEEEEEEEEeccCCc--c------CCCccceEEEeeHHHhhhCcc---ChHHHHHHHHHh
Confidence 111233333332221 1 124677899999999998765 344555555544
No 49
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.78 E-value=9.7e-19 Score=125.96 Aligned_cols=111 Identities=19% Similarity=0.182 Sum_probs=73.8
Q ss_pred eEEEEEeeCCcEEEEEecCC---CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccc
Q 030956 7 SVLSMLIYLGQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVN 83 (168)
Q Consensus 7 ~~~~v~~~~~~vLl~~r~~~---~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (168)
+++++..++++|||+++... ++.|++|||+++.||++.+||.||++||||+.+..+.....+ ......
T Consensus 51 av~vl~~~~~~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~----~~~~~~----- 121 (198)
T 1vhz_A 51 AVMIVPIVDDHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKL----SMAPSY----- 121 (198)
T ss_dssp EEEEEEEETTEEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEE----ECCTTT-----
T ss_pred EEEEEEEECCEEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEE----eCCCCc-----
Confidence 44444455559999988653 268999999999999999999999999999996543222111 111111
Q ss_pred cccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccC
Q 030956 84 RLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDY 138 (168)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~ 138 (168)
.....++|.+....... .. .+..|..++.|++++++.+++.+.
T Consensus 122 -------~~~~~~~f~a~~~~~~~-~~----~~~~E~~~~~w~~~~el~~~~~~~ 164 (198)
T 1vhz_A 122 -------FSSKMNIVVAQDLYPES-LE----GDEPEPLPQVRWPLAHMMDLLEDP 164 (198)
T ss_dssp -------CCCEEEEEEEEEEEECC-CC----CCCSSCCCEEEEEGGGGGGGGGCT
T ss_pred -------cCcEEEEEEEEeCCccc-CC----CCCCceEEEEEEEHHHHHHHHHcC
Confidence 01224566666543211 11 244578899999999999988644
No 50
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.78 E-value=2.2e-18 Score=123.12 Aligned_cols=101 Identities=22% Similarity=0.229 Sum_probs=71.7
Q ss_pred eEEEEEeeCCcEEEEEecCC--CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccccc
Q 030956 7 SVLSMLIYLGQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNR 84 (168)
Q Consensus 7 ~~~~v~~~~~~vLl~~r~~~--~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (168)
++.+++.++++|||++|... +|.|.+|||+++.|||+.+||+||++||||+.+.. ...+.. +.++..
T Consensus 42 ~v~~ii~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~-~~~~~~---~~~~~~------- 110 (189)
T 3cng_A 42 IVGCIPEWENKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEI-RELYAV---YSLPHI------- 110 (189)
T ss_dssp EEEEEEEETTEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEE-EEEEEE---EEEGGG-------
T ss_pred EEEEEEEeCCEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCcccc-ceeEEE---EecCCC-------
Confidence 44556667899999999863 48899999999999999999999999999999642 222221 222211
Q ss_pred ccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHH
Q 030956 85 LWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVV 132 (168)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~ 132 (168)
....++|.+....... ....|..+++|++++++.
T Consensus 111 -------~~~~~~f~~~~~~~~~-------~~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 111 -------SQVYMLFRAKLLDLDF-------FPGIESLEVRLFGEQEIP 144 (189)
T ss_dssp -------TEEEEEEEEEECCSCC-------CCCTTEEEEEEECTTTCC
T ss_pred -------cEEEEEEEEEeCCCcc-------CCCccceeEEEECHHHcC
Confidence 1224567666643321 124588999999999998
No 51
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.77 E-value=1.1e-18 Score=122.60 Aligned_cols=108 Identities=16% Similarity=0.215 Sum_probs=72.3
Q ss_pred eeEEEEEeeCCcEEEEEecC----CCCcEE-cCccccCCCCCHHHHHHHHHHHhhCCcccee--eeecCCceeecCCccc
Q 030956 6 CSVLSMLIYLGQIFVASRLN----VPGAWQ-MPQGGIEDGEDPKLAAMRELREETGIVSAEI--IAEVPNWLTYDFPPAV 78 (168)
Q Consensus 6 ~~~~~v~~~~~~vLl~~r~~----~~g~w~-lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~--~~~~~~~~~~~~~~~~ 78 (168)
++.++++..++++||++|.. .+|.|. +|||+++.|||+.+||+||++||||+.+... .....+ ..+.++..
T Consensus 36 ~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~~~~-~~~~~~~~- 113 (171)
T 1q27_A 36 VVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPLASF-SPFQTTLS- 113 (171)
T ss_dssp EEEEEEEETTTEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEEEEE-CSSSSCCS-
T ss_pred EEEEEEECCCCeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEEEEE-eccCCCCc-
Confidence 44445556788999999864 258898 9999999999999999999999999996432 111111 00222111
Q ss_pred ccccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcc
Q 030956 79 KTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAV 136 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 136 (168)
...++|.+.. ... ... +..|+.+++|++++++.++..
T Consensus 114 --------------~~~~~f~~~~-~~~--~~~----~~~E~~~~~W~~~~el~~~~~ 150 (171)
T 1q27_A 114 --------------SFMCVYELRS-DAT--PIF----NPNDISGGEWLTPEHLLARIA 150 (171)
T ss_dssp --------------SEEEEEEEEC-CCC--CCS----CTTTCSCCEEECHHHHHHHHH
T ss_pred --------------cEEEEEEEEE-CCc--ccc----CchhhheEEEecHHHHHHHHh
Confidence 1235666665 221 111 335788999999999997654
No 52
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.77 E-value=5.4e-19 Score=129.74 Aligned_cols=122 Identities=14% Similarity=0.126 Sum_probs=79.9
Q ss_pred CCcEEEEEecCC--CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccccCCcccc
Q 030956 15 LGQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHG 92 (168)
Q Consensus 15 ~~~vLl~~r~~~--~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (168)
+++|||++|... +|.|.+|||+++.|||+.+||.||++||||+.+..+ ..+.. +..+..... + .
T Consensus 27 ~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~-~~l~~---~~~~~r~~~-------~---~ 92 (226)
T 2fb1_A 27 EISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYM-EQVGA---FGAIDRDPG-------E---R 92 (226)
T ss_dssp EEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEE-EEEEE---ECCTTSSSS-------S---C
T ss_pred CCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCce-EEEEE---eCCCCcCCC-------c---e
Confidence 568999999864 388999999999999999999999999999996432 22221 111110000 0 1
Q ss_pred ceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHhhc
Q 030956 93 QAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNEN 157 (168)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~~~ 157 (168)
.....|.+.+...... .+..|+.+++|++++++.++.++ +..++...+..++..+...
T Consensus 93 ~v~~~y~a~~~~~~~~------~~~~e~~~~~W~~~~el~~l~~d-h~~il~~a~~rlr~~~~y~ 150 (226)
T 2fb1_A 93 VVSIAYYALININEYD------RELVQKHNAYWVNINELPALIFD-HPEMVDKAREMMKQKASVE 150 (226)
T ss_dssp EEEEEEEEECCTTSSC------HHHHHHTTEEEEETTSCCCBSTT-HHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEEEEEecCcccc------cCCccccceEEEEHHHhhhccCC-HHHHHHHHHHHHHhhcccC
Confidence 1234566665432211 12357889999999999987665 2456666666666655443
No 53
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.77 E-value=2.5e-18 Score=123.18 Aligned_cols=112 Identities=21% Similarity=0.232 Sum_probs=73.9
Q ss_pred eeeeEEEEEeeCC--cEEEEEecC----CCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcc
Q 030956 4 AECSVLSMLIYLG--QIFVASRLN----VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPA 77 (168)
Q Consensus 4 r~~~~~~v~~~~~--~vLl~~r~~----~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~ 77 (168)
+.+++++++.+++ +|||++|+. .+|.|.+|||+++.||++.+||+||++||||+.+..+.........+...
T Consensus 34 ~~~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~-- 111 (194)
T 1nqz_A 34 RRAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLLGELDDVFTPV-- 111 (194)
T ss_dssp EEEEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEEEEECCCEEETT--
T ss_pred ceEEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEEEEEccCccCCC--
Confidence 4555656666677 899999875 35899999999999999999999999999999965332211111111100
Q ss_pred cccccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHH-Hhhc
Q 030956 78 VKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEV-VEQA 135 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~-~~~~ 135 (168)
....++|.+.......... .+..|+.+++|++++++ .+..
T Consensus 112 --------------~~~~~~f~~~~~~~~~~~~----~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 112 --------------GFHVTPVLGRIAPEALDTL----RVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp --------------TEEEEEEEEEECGGGGGGC----CCCTTEEEEECCBHHHHHHSCC
T ss_pred --------------CeEEEEEEEEecCCccccC----CCccceeEEEEEEHHHhccCCC
Confidence 1224567776652211011 24458899999999999 6644
No 54
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.77 E-value=6.6e-19 Score=126.46 Aligned_cols=113 Identities=19% Similarity=0.290 Sum_probs=72.0
Q ss_pred CCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccccCCccccce
Q 030956 15 LGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQA 94 (168)
Q Consensus 15 ~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (168)
+++|||++|...+|.|.+|||+++.||++.+||+||++||||+.+... ..+.. ..+ ... ...
T Consensus 53 ~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~-~~l~~-~~~--~~~--------------~~~ 114 (194)
T 2fvv_A 53 EEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLG-RLVGI-FEN--QER--------------KHR 114 (194)
T ss_dssp CCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE-EEEEE-EEE--TTT--------------TEE
T ss_pred CCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccc-eEEEE-EEc--CCC--------------ceE
Confidence 589999999876789999999999999999999999999999986432 22221 111 110 012
Q ss_pred EEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHH
Q 030956 95 QKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 150 (168)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l 150 (168)
.++|.+.+......... ...+..+++|++++++.+++... .......+..+
T Consensus 115 ~~~f~~~~~~~~~~~~~----~~e~~~~~~W~~~~el~~~l~~~-~~~~~~~l~~l 165 (194)
T 2fvv_A 115 TYVYVLIVTEVLEDWED----SVNIGRKREWFKIEDAIKVLQYH-KPVQASYFETL 165 (194)
T ss_dssp EEEEEEEEEEECSSCHH----HHHHCCCEEEEEHHHHHHHHTTT-CHHHHHHTCC-
T ss_pred EEEEEEEEccccCCCCC----cccccceEEEEEHHHHHHHHhcC-cHHHHHHHHHH
Confidence 35566654321110000 01134688999999999876432 34444444444
No 55
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.76 E-value=5.9e-18 Score=118.32 Aligned_cols=115 Identities=19% Similarity=0.271 Sum_probs=73.0
Q ss_pred eEEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccccccc
Q 030956 7 SVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLW 86 (168)
Q Consensus 7 ~~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (168)
++++++.+++++||++|+. |.|.+|||+++.|||+.+||.||++||||+.+..+.. + ..+.++.
T Consensus 18 ~~~~ii~~~~~vLL~~r~~--g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l---~~~~~~~---------- 81 (163)
T 3f13_A 18 RATAIIEMPDGVLVTASRG--GRYNLPGGKANRGELRSQALIREIREETGLRINSMLY-L---FDHITPF---------- 81 (163)
T ss_dssp EEEEECEETTEEEEEECC-----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEE-E---EEEECSS----------
T ss_pred EEEEEEEeCCEEEEEEECC--CeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEE-E---EEEecCC----------
Confidence 4556667789999999874 8999999999999999999999999999999643322 1 2232222
Q ss_pred CCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHh
Q 030956 87 GGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 155 (168)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~ 155 (168)
...++|.+.+.. . . ...+|+.+++|++.+.....+ ....+.++..+.....
T Consensus 82 ------~~~~~f~~~~~~-~--~-----~~~~E~~~~~W~~~~~~~~~l----~~~~~~il~~~~~~~~ 132 (163)
T 3f13_A 82 ------NAHKVYLCIAQG-Q--P-----KPQNEIERIALVSSPDTDMDL----FVEGRAILRRYARLRN 132 (163)
T ss_dssp ------EEEEEEEEEC-C-C--C-----CCCTTCCEEEEESSTTCSSCB----CHHHHHHHHHHHHHTT
T ss_pred ------eEEEEEEEEECC-c--C-----ccCCCceEEEEECcccccCCC----CHHHHHHHHHHHHhhh
Confidence 113556665421 1 1 123488999999954433222 3345556665554433
No 56
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.76 E-value=2.3e-18 Score=125.61 Aligned_cols=96 Identities=18% Similarity=0.139 Sum_probs=60.4
Q ss_pred CCcEEcCccccCC-CCCHHHHHHHHHHHhhCCcc--ceeeeecCCceeecCCcccccccccccCCccccceEEEEEEEEc
Q 030956 27 PGAWQMPQGGIED-GEDPKLAAMRELREETGIVS--AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLT 103 (168)
Q Consensus 27 ~g~w~lP~G~ie~-~E~~~eaa~RE~~EEtGi~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (168)
++.|++|||+++. |||+.+||+||++||||+.+ ..+.....+.....+. ....++|.+...
T Consensus 94 ~~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~g~~----------------~~~~~~f~a~~~ 157 (218)
T 3q91_A 94 GVTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGLT----------------GSRQTMFYTEVT 157 (218)
T ss_dssp CEEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC---C----------------CEEEEEEEEEEC
T ss_pred CeEEECCcceeCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEecCCCcc----------------ceEEEEEEEEEC
Confidence 3689999999999 99999999999999999996 4443332221111111 123467777765
Q ss_pred cCCcccccCCCCCCcccceeeEeChhHHHhhcccC
Q 030956 104 NDESEINLANGEADPEFAEWKWASPEEVVEQAVDY 138 (168)
Q Consensus 104 ~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~ 138 (168)
............+..|..++.|+|++++.+++.+.
T Consensus 158 ~~~~~~~~~~~~d~~E~~ev~wv~l~el~~~i~~g 192 (218)
T 3q91_A 158 DAQRSGPGGGLVEEGELIEVVHLPLEGAQAFADDP 192 (218)
T ss_dssp GGGBCC---------CCEEEEEEEGGGHHHHHHCT
T ss_pred CcccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 32210001111245689999999999999988543
No 57
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.76 E-value=2.7e-18 Score=129.18 Aligned_cols=109 Identities=17% Similarity=0.328 Sum_probs=69.7
Q ss_pred EEEEEee--CCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccc
Q 030956 8 VLSMLIY--LGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRL 85 (168)
Q Consensus 8 ~~~v~~~--~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (168)
+++++.+ +++|||++|...+|.|.+|||+++.|||+.+||+||++||||+.+..+... .......+.
T Consensus 104 v~avv~~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~~~-~~~~~~~~~---------- 172 (271)
T 2a6t_A 104 RGAIMLDMSMQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRINP-NEFIDMTIR---------- 172 (271)
T ss_dssp EEEEEBCSSSSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTCCT-TCEEEEEET----------
T ss_pred EEEEEEECCCCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceeeeee-eeeccCCcC----------
Confidence 3445544 389999999876789999999999999999999999999999996543211 111111000
Q ss_pred cCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcc
Q 030956 86 WGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAV 136 (168)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 136 (168)
....++|.+........... .+..|+.+++|++++++.++..
T Consensus 173 ------~~~~~~f~~~~~~~~~~~~~---~~~~E~~~~~W~~~~el~~~~~ 214 (271)
T 2a6t_A 173 ------GQNVRLYIIPGISLDTRFES---RTRKEISKIEWHNLMDLPTFKK 214 (271)
T ss_dssp ------TEEEEEEEECCCCTTCCCC---------EEEEEEEEGGGSTTCC-
T ss_pred ------CceEEEEEEEEecCcccCCC---CCccceeEEEEEEHHHHHHHHh
Confidence 11235566654332211111 2456899999999999988654
No 58
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.75 E-value=1.6e-17 Score=114.81 Aligned_cols=111 Identities=20% Similarity=0.333 Sum_probs=74.7
Q ss_pred CCcEEEEEecCC---CCcEEcCccccCCCCCHH-HHHHHHHHHhhC-CccceeeeecCCceeecCCcccccccccccCCc
Q 030956 15 LGQIFVASRLNV---PGAWQMPQGGIEDGEDPK-LAAMRELREETG-IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGE 89 (168)
Q Consensus 15 ~~~vLl~~r~~~---~g~w~lP~G~ie~~E~~~-eaa~RE~~EEtG-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (168)
++++||++|... +|+|+||||+++.||++. +||.||+.|||| +.+... ..+.. ..|.+++..
T Consensus 33 ~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~-~~l~~-~~~~~~~~~----------- 99 (155)
T 1x51_A 33 GAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHL-RHLGE-VVHTFSHIK----------- 99 (155)
T ss_dssp SEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTC-EECCC-BCCBCSSCE-----------
T ss_pred CCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeee-eecce-EEEecCCcc-----------
Confidence 478999998853 389999999999999996 999999999999 774322 22221 234444321
Q ss_pred cccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHH
Q 030956 90 WHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRP 152 (168)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~ 152 (168)
...++|.+....... ...|..+++|++++++.++.+ +...++++..+..
T Consensus 100 ---~~~~~~~~~~~~~~~--------~~~e~~~~~W~~~~el~~~~~---~~~~~~~l~~~~~ 148 (155)
T 1x51_A 100 ---LTYQVYGLALEGQTP--------VTTVPPGARWLTQEEFHTAAV---STAMKKVFRVYQG 148 (155)
T ss_dssp ---EEEEEEEEECSSCCC--------CCCCCTTEEEEEHHHHHHSCC---CHHHHHHHHHHHH
T ss_pred ---EEEEEEEEEEcCCCC--------CCCCCCccEEccHHHhhhcCC---CHHHHHHHHHHHh
Confidence 112455555432211 113567899999999998766 5566667666543
No 59
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.75 E-value=5.6e-18 Score=116.94 Aligned_cols=116 Identities=16% Similarity=0.211 Sum_probs=72.2
Q ss_pred eEEEEEeeCCc----EEEEEecCC--CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccc
Q 030956 7 SVLSMLIYLGQ----IFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 80 (168)
Q Consensus 7 ~~~~v~~~~~~----vLl~~r~~~--~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~ 80 (168)
++.+++.++++ +|+++|... +| |.+|||+++.|||+.+||+||++||||+.+... ..+.. ..+.+....
T Consensus 10 ~~~~ii~~~~~~~~~vLl~~r~~~~~~g-w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~-~~~~~~~~~-- 84 (155)
T 2b06_A 10 TNICLIEDLETQRVVMQYRAPENNRWSG-YAFPGGHVENDEAFAESVIREIYEETGLTIQNP-QLVGI-KNWPLDTGG-- 84 (155)
T ss_dssp EEEEEEEETTTTEEEEEEEC-----CCE-EECCCCBCCTTSCHHHHHHHHHHHHHSEEEESC-EEEEE-EEEECTTSC--
T ss_pred EEEEEEEECCCCeEEEEEEECCCCCCCC-EeccceecCCCCCHHHHHHHHHHHHhCccccCC-cEEEE-EeeccCCCc--
Confidence 35566666777 999988763 35 899999999999999999999999999996432 22211 122221111
Q ss_pred ccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHH
Q 030956 81 KVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRT 149 (168)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~ 149 (168)
....++|.+...... . ...|..+++|++++++.++... ...+.++..
T Consensus 85 -----------~~~~~~~~~~~~~~~----~----~~~e~~~~~W~~~~el~~~~~~---~~~~~~l~~ 131 (155)
T 2b06_A 85 -----------RYIVICYKATEFSGT----L----QSSEEGEVSWVQKDQIPNLNLA---YDMLPLMEM 131 (155)
T ss_dssp -----------EEEEEEEEECEEEEC----C----CCBTTBEEEEEEGGGGGGSCBC---TTHHHHHHH
T ss_pred -----------eEEEEEEEEEecCCC----C----CCCcceeeEEeeHHHhhhCCCC---hhHHHHHHH
Confidence 112344555433221 1 1247789999999999998763 334445543
No 60
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.75 E-value=4.1e-18 Score=126.09 Aligned_cols=125 Identities=17% Similarity=0.239 Sum_probs=80.4
Q ss_pred CCcEEEEEecCC--CCcEEcCccccCC--CCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccccCCcc
Q 030956 15 LGQIFVASRLNV--PGAWQMPQGGIED--GEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEW 90 (168)
Q Consensus 15 ~~~vLl~~r~~~--~g~w~lP~G~ie~--~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (168)
+++|||++|... +|.|.+|||+++. |||+.+||.||++||||+.+..+ ..+.. ......... +
T Consensus 36 ~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~-~~l~~-~~~~~r~~~---------~-- 102 (240)
T 3gz5_A 36 QLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYI-EQLCT-VGNNSRDAR---------G-- 102 (240)
T ss_dssp EEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEE-EEEEE-EEESSSSTT---------S--
T ss_pred CcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCce-eeEEE-eCCCccCCC---------c--
Confidence 348999999863 3889999999999 99999999999999999996433 22221 111111000 0
Q ss_pred ccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcc-cCChHHHHHHHHHHHHHHhhcCc
Q 030956 91 HGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAV-DYKRPTYEEVMRTFRPYLNENGI 159 (168)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~-~~~~~~~~~~l~~l~~~l~~~~~ 159 (168)
......|.+.+....... ...|+.+++|++++++..... ..+..++...++.++..+...+.
T Consensus 103 -~~~~~~y~a~~~~~~~~~------~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~~rlr~kl~y~~i 165 (240)
T 3gz5_A 103 -WSVTVCYTALMSYQACQI------QIASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQKALYSLV 165 (240)
T ss_dssp -CEEEEEEEEECCHHHHHH------HHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHHHHHHHHHHHCSG
T ss_pred -eEEEEEEEEEecccccCC------CCCcccceEEecHHHcccCCcchhHHHHHHHHHHHHHHhcccCcH
Confidence 112355665554332111 124778999999999975332 22356667777777776665543
No 61
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.75 E-value=9.1e-18 Score=130.37 Aligned_cols=115 Identities=23% Similarity=0.257 Sum_probs=75.1
Q ss_pred eEEEEEeeCCcEEEEEecCC--CCcEEcCccccCCCCCHHHHHHHHHHHhhCCcccee--eeecCCceeecCCccccccc
Q 030956 7 SVLSMLIYLGQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI--IAEVPNWLTYDFPPAVKTKV 82 (168)
Q Consensus 7 ~~~~v~~~~~~vLl~~r~~~--~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~--~~~~~~~~~~~~~~~~~~~~ 82 (168)
++.+++.++++|||++|... +|.|.+|||+++.|||+.+||.||++||||+.+... ...+.....+.++.....
T Consensus 210 ~v~~vv~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~~~~~~~~~-- 287 (352)
T 2qjt_B 210 TVDALVIVNDHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFDYPDRSVR-- 287 (352)
T ss_dssp EEEEEEEETTEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEECCTTSCTT--
T ss_pred EEEEEEEECCEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEecCCCCCCC--
Confidence 34455668899999999864 388999999999999999999999999999986421 110111112222221100
Q ss_pred ccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeCh-hHHHhh
Q 030956 83 NRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASP-EEVVEQ 134 (168)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~-~e~~~~ 134 (168)
+ ....+.|.+.+......... .+..|+.+++|+++ +++.++
T Consensus 288 -----~---~~~~~~f~~~~~~~~~~~~~---~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 288 -----G---RTISHVGLFVFDQWPSLPEI---NAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp -----S---EEEEEEEEEEECSCSSCCCC---CCCTTEEEEEEEESSHHHHHT
T ss_pred -----c---cEEEEEEEEEEeCCCCCCcc---CCCccceEEEEecHHHHHHhh
Confidence 0 01235666666543311111 23468999999999 999986
No 62
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.75 E-value=6.7e-18 Score=130.49 Aligned_cols=114 Identities=18% Similarity=0.269 Sum_probs=70.9
Q ss_pred eEEEEEeeCCcEEEEEecCC--CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeee--cCCceeecCCccccccc
Q 030956 7 SVLSMLIYLGQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAE--VPNWLTYDFPPAVKTKV 82 (168)
Q Consensus 7 ~~~~v~~~~~~vLl~~r~~~--~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~--~~~~~~~~~~~~~~~~~ 82 (168)
++.+++.++++|||++|+.. +|.|.+|||+++.|||+.+||.||++||||+.+...... +.....+.++.....
T Consensus 205 ~v~~vi~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~-- 282 (341)
T 2qjo_A 205 TTDAVVVQAGHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFDAPGRSLR-- 282 (341)
T ss_dssp EEEEEEEETTEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEECCTTSCTT--
T ss_pred EEEEEEEeCCEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccccccccccceEEEeCCCCCCC--
Confidence 45566668899999999863 488999999999999999999999999999996422111 111122222221100
Q ss_pred ccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhh
Q 030956 83 NRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQ 134 (168)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~ 134 (168)
.....++|.+........ .. .+..|..+++|++++++.++
T Consensus 283 --------~~~~~~~f~~~~~~~~~~-~~---~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 283 --------GRTITHAYFIQLPGGELP-AV---KGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp --------SCEEEEEEEEECCSSSCC-CC---C------CEEEEEHHHHHHT
T ss_pred --------CcEEEEEEEEEecCCCcC-cc---CCCCceeeEEEeeHHHHhhh
Confidence 011235677766433211 11 24468899999999999996
No 63
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.75 E-value=1.7e-17 Score=120.63 Aligned_cols=105 Identities=24% Similarity=0.301 Sum_probs=68.8
Q ss_pred CcEEEEEecCC---CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccccCCcccc
Q 030956 16 GQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHG 92 (168)
Q Consensus 16 ~~vLl~~r~~~---~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (168)
+++||+++.+. ++.|++|||+++.||++.+||+||++||||+.+..+ ..+... +..+ .. ..
T Consensus 77 ~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~-~~l~~~--~~~~-~~------------~~ 140 (212)
T 2dsc_A 77 ECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIA-ECSPAV--CMDP-GL------------SN 140 (212)
T ss_dssp CEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEE-EECCCE--ESCT-TT------------BC
T ss_pred cEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccce-EEeccE--EcCC-Cc------------cC
Confidence 37999886542 357999999999999999999999999999995432 222211 1111 11 11
Q ss_pred ceEEEEEEEEccCCcc-cccCCCCCCcccceeeEeChhHHHhhcc
Q 030956 93 QAQKWFLMKLTNDESE-INLANGEADPEFAEWKWASPEEVVEQAV 136 (168)
Q Consensus 93 ~~~~~~~~~~~~~~~~-~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 136 (168)
...++|.+.+...... .......+..|..++.|++++++.+++.
T Consensus 141 ~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 141 CTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp CEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred ceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 2246677765543211 0011112456899999999999998875
No 64
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.74 E-value=4.5e-18 Score=122.97 Aligned_cols=129 Identities=11% Similarity=0.110 Sum_probs=80.3
Q ss_pred ceeeeeEEEEEeeCCcEEEEEecCCC------CcEEc-CccccCCCCC------HHHHHHHHHHHhhCCccceeeeecCC
Q 030956 2 IYAECSVLSMLIYLGQIFVASRLNVP------GAWQM-PQGGIEDGED------PKLAAMRELREETGIVSAEIIAEVPN 68 (168)
Q Consensus 2 ~~r~~~~~~v~~~~~~vLl~~r~~~~------g~w~l-P~G~ie~~E~------~~eaa~RE~~EEtGi~~~~~~~~~~~ 68 (168)
.|+..+.++++.+++++|+++|.+.+ |.|.+ |||+++.||| +.+||+||++||||+.+... ..++.
T Consensus 65 ~~~q~i~~~II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~-~~ig~ 143 (211)
T 3e57_A 65 TTKQVIPYVVIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLREL-EFLGL 143 (211)
T ss_dssp TEEEEEEEEEEEETTEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEE-EEEEE
T ss_pred cccceEEEEEEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeecc-EEEEE
Confidence 46677777888889999999997643 67998 9999999998 49999999999999985432 22221
Q ss_pred ceeecC-CcccccccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHH
Q 030956 69 WLTYDF-PPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVM 147 (168)
Q Consensus 69 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l 147 (168)
..+.. +... . ....+|.+..... .+ ...|..+++|++++++.++.... ..--+.++
T Consensus 144 -~~~~~~~~~~-~------------~l~~~f~~~~~~g----~~----~~~E~~~~~W~~~~eL~~~~~~l-e~wS~lvl 200 (211)
T 3e57_A 144 -INSSTTEVSR-V------------HLGALFLGRGKFF----SV----KEKDLFEWELIKLEELEKFSGVM-EGWSKISA 200 (211)
T ss_dssp -EECCSSHHHH-T------------EEEEEEEEEEEEE----EE----SCTTTCEEEEEEHHHHHHHGGGC-CHHHHHHH
T ss_pred -EeccCCCCCe-E------------EEEEEEEEEeCCc----ee----CCCCeEEEEEEEHHHHHHhHhhc-cchhHHHH
Confidence 12211 1111 0 0123466654421 11 22367889999999999974322 23344556
Q ss_pred HHHHHHH
Q 030956 148 RTFRPYL 154 (168)
Q Consensus 148 ~~l~~~l 154 (168)
+.+.+++
T Consensus 201 ~~l~~~~ 207 (211)
T 3e57_A 201 AVLLNLF 207 (211)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 6665554
No 65
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.74 E-value=3.3e-17 Score=128.04 Aligned_cols=133 Identities=17% Similarity=0.250 Sum_probs=81.5
Q ss_pred cEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCcccccccccccCCccccceEE
Q 030956 17 QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQK 96 (168)
Q Consensus 17 ~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (168)
+|||++|+. .|.|.+|||+++.|||+.+||+||++||||+.+... ..+. ...+.+...... .-+..++.......+
T Consensus 39 ~vLLv~r~~-~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~-~~l~-~~~~~~~~~g~~-~~~~~~~~~~~~~~~ 114 (364)
T 3fjy_A 39 EVCIVHRPK-YDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLG-PYLC-EVEYPLSEEGKK-TRHSHDCTADTKHTL 114 (364)
T ss_dssp EEEEEEETT-TTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEE-EEEE-EEC----------------------CEE
T ss_pred EEEEEEcCC-CCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeec-cccc-eEEEeccCCCcc-cccccccccCceEEE
Confidence 799999976 489999999999999999999999999999996432 2221 122332211000 000001111234457
Q ss_pred EEEEEEccCCcc------cccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHhh
Q 030956 97 WFLMKLTNDESE------INLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 156 (168)
Q Consensus 97 ~~~~~~~~~~~~------~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~~ 156 (168)
+|.+........ .......+..|+.+++|++++++.+++. .+..+.+++.+..++..
T Consensus 115 ~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~---~~~~r~il~~~~~~l~~ 177 (364)
T 3fjy_A 115 YWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILS---HSTDKDTLAVFVDRVQE 177 (364)
T ss_dssp EEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCS---CHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhc---chhhHHHHHHHHHHhcc
Confidence 888877654210 0111112446899999999999999875 45666777777776654
No 66
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.68 E-value=3.1e-16 Score=122.68 Aligned_cols=118 Identities=16% Similarity=0.235 Sum_probs=84.2
Q ss_pred EEEEEeeCCcEEEEEecCC---CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccceeeeecCCceeecCCccccccccc
Q 030956 8 VLSMLIYLGQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNR 84 (168)
Q Consensus 8 ~~~v~~~~~~vLl~~r~~~---~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (168)
++++.+++|+|||++|... +|+|+||||+++.| ++.+|+.||+.||||+.+... ..++ ...|.+++...
T Consensus 244 ~~vi~~~~g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~-~~l~-~~~h~~~h~~~----- 315 (369)
T 3fsp_A 244 VAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELT-EPIV-SFEHAFSHLVW----- 315 (369)
T ss_dssp EEEEECSSSEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEEC-CCCC-EEEEECSSEEE-----
T ss_pred EEEEEeCCCEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeee-cccc-cEEEEcceEEE-----
Confidence 3333446899999999863 48999999999999 999999999999999996432 2222 34555554321
Q ss_pred ccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHhh
Q 030956 85 LWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 156 (168)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~~ 156 (168)
..++|.+..... ..|..+++|++++++.++.+ +...+.+++.+..++..
T Consensus 316 ---------~~~~~~~~~~~~-----------~~e~~~~~Wv~~~el~~~~l---~~~~~~il~~l~~~~~~ 364 (369)
T 3fsp_A 316 ---------QLTVFPGRLVHG-----------GPVEEPYRLAPEDELKAYAF---PVSHQRVWREYKEWASG 364 (369)
T ss_dssp ---------EEEEEEEEECCS-----------SCCCTTEEEEEGGGGGGSCC---CHHHHHHHHHHHHHTC-
T ss_pred ---------EEEEEEEEEcCC-----------CCCccccEEeeHHHhhhCCC---CHHHHHHHHHHHHHhcC
Confidence 124555555331 23678899999999999766 67778888888776644
No 67
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.68 E-value=1.5e-15 Score=112.00 Aligned_cols=132 Identities=18% Similarity=0.219 Sum_probs=79.6
Q ss_pred eeeeeEEEEEeeCCcEEEEEecC----CCCcEEcC-ccccCCC------CC---HHHHHHHHHHHhhCCcccee----ee
Q 030956 3 YAECSVLSMLIYLGQIFVASRLN----VPGAWQMP-QGGIEDG------ED---PKLAAMRELREETGIVSAEI----IA 64 (168)
Q Consensus 3 ~r~~~~~~v~~~~~~vLl~~r~~----~~g~w~lP-~G~ie~~------E~---~~eaa~RE~~EEtGi~~~~~----~~ 64 (168)
+++++.+++++.++++||.+|+. .||.|.+| ||+++.| |+ +.+||+||++||||+.+..+ ..
T Consensus 58 ~h~av~v~v~~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~ 137 (235)
T 2dho_A 58 LHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEIN 137 (235)
T ss_dssp CEEEEEEEEECTTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSE
T ss_pred eEEEEEEEEEcCCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhhcE
Confidence 45555556666689999999874 46899999 5999999 88 49999999999999985421 01
Q ss_pred ecCCceeecCCcccccccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhccc------C
Q 030956 65 EVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVD------Y 138 (168)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~------~ 138 (168)
.+.. +.+..+... +-......++|.+.... .... +..|+.+++|++++++.+++.. .
T Consensus 138 ~l~~-~~y~~~~~~---------~~~~~e~~~vf~~~~~~---~~~~----~~~Ev~~~~wv~~~el~~~l~~~~~~~~~ 200 (235)
T 2dho_A 138 YLTR-IHYKAQSDG---------IWGEHEIDYILLVRMNV---TLNP----DPNEIKSYCYVSKEELKELLKKAASGEIK 200 (235)
T ss_dssp EEEE-EEEEEECSS---------SBEEEEEEEEEEEECCC---CCCC----CTTTEEEEEEECHHHHHHHHHHHHTTSSC
T ss_pred EEEE-EEEeccCCC---------ccceeEEEEEEEEEECC---CCcC----ChHHEEEEEEEcHHHHHHHHhhccCCCcE
Confidence 1111 112111100 00001122445555321 1111 3468999999999999887642 1
Q ss_pred ChHHHHHHHHHHH
Q 030956 139 KRPTYEEVMRTFR 151 (168)
Q Consensus 139 ~~~~~~~~l~~l~ 151 (168)
..+.+..++..+.
T Consensus 201 ftp~~~~i~~~~L 213 (235)
T 2dho_A 201 ITPWFKIIAATFL 213 (235)
T ss_dssp BCHHHHHHHHHTH
T ss_pred ECHhHHHHHHHHH
Confidence 2344555555543
No 68
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.67 E-value=6.6e-16 Score=116.28 Aligned_cols=123 Identities=16% Similarity=0.224 Sum_probs=78.7
Q ss_pred cEEEEEecCC--CCcEEcCccccCCCCCHHHHHHHHHHHhhCCccc--eeeeecCCceeecCCcccccccccccCCcccc
Q 030956 17 QIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA--EIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHG 92 (168)
Q Consensus 17 ~vLl~~r~~~--~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (168)
+|||++|... +|.|.+|||+++.||++.+||.||++||||+.+. .+... .++..+..... ..
T Consensus 57 ~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~l----~~~~~~~r~~~----------~~ 122 (273)
T 2fml_A 57 KVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQL----HSFSRPDRDPR----------GW 122 (273)
T ss_dssp EEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEEE----EEECCTTSSTT----------SS
T ss_pred EEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEEE----EEEcCCCCCCC----------ce
Confidence 8999999864 3889999999999999999999999999997642 22111 12221111000 01
Q ss_pred ceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhc------------------------ccCChHHHHHHHH
Q 030956 93 QAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA------------------------VDYKRPTYEEVMR 148 (168)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~------------------------~~~~~~~~~~~l~ 148 (168)
...++|.+.+.... . ....|..+++|++++++.+.+ ...+..++...+.
T Consensus 123 ~~~~~y~a~~~~~~----~---~~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~~LafdH~~Il~~al~ 195 (273)
T 2fml_A 123 VVTVSYLAFIGEEP----L---IAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGKDTLAFDHSEIIIKAFN 195 (273)
T ss_dssp EEEEEEEEECCCCC----C---CCCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTCCBCSSSCCSTTHHHHHHHHHH
T ss_pred EEEEEEEEEeCCCC----C---CCCcceeeEEEEEhhHhhhhhccccchhhhccccccccccCCCcccccHHHHHHHHHH
Confidence 23456666654322 1 244588999999999754332 1113456677777
Q ss_pred HHHHHHhhcCcc
Q 030956 149 TFRPYLNENGIA 160 (168)
Q Consensus 149 ~l~~~l~~~~~~ 160 (168)
.++..+...+..
T Consensus 196 rlr~kl~y~~i~ 207 (273)
T 2fml_A 196 RVVDKMEHEPQV 207 (273)
T ss_dssp HHHHHTTTCCGG
T ss_pred HHHHHhcCCcHH
Confidence 777776665443
No 69
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.67 E-value=1.9e-15 Score=112.11 Aligned_cols=133 Identities=17% Similarity=0.179 Sum_probs=80.0
Q ss_pred eeeeeEEEEEeeCCcEEEEEecC----CCCcEEcCc-cccCCC------CCH---HHHHHHHHHHhhCCccceee-eecC
Q 030956 3 YAECSVLSMLIYLGQIFVASRLN----VPGAWQMPQ-GGIEDG------EDP---KLAAMRELREETGIVSAEII-AEVP 67 (168)
Q Consensus 3 ~r~~~~~~v~~~~~~vLl~~r~~----~~g~w~lP~-G~ie~~------E~~---~eaa~RE~~EEtGi~~~~~~-~~~~ 67 (168)
+++++.+++++.++++||.+|+. .||.|.+|+ |+++.| |++ .+||+||+.||||+.+..+. ..+.
T Consensus 69 ~h~av~v~v~~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~ 148 (246)
T 2pny_A 69 LHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIV 148 (246)
T ss_dssp CEEEEEEEEECTTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSE
T ss_pred EEEEEEEEEEeCCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccccE
Confidence 44555555666688999999974 468999995 999998 887 99999999999999853210 0011
Q ss_pred Cc--eeecCCcccccccccccCCcc-ccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhccc------C
Q 030956 68 NW--LTYDFPPAVKTKVNRLWGGEW-HGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVD------Y 138 (168)
Q Consensus 68 ~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~------~ 138 (168)
.. +.|..+... .+ .....++|.+.... ...+ +..|+.+++|++++++.+++.. .
T Consensus 149 ~l~~~~y~~~~~~----------~~~~~e~~~vf~~~~~~---~~~~----~~~Ev~~~~wv~~eel~~~l~~~~~~~~~ 211 (246)
T 2pny_A 149 FMTIYHHKAKSDR----------IWGEHEICYLLLVRKNV---TLNP----DPSETKSILYLSQEELWELLEREARGEVK 211 (246)
T ss_dssp EEEEEEEEEESSS----------SBEEEEEEEEEEEECCC---CCCC----CTTTEEEEEEECHHHHHHHHHHHHHTSSC
T ss_pred EEEEEEEEecCCC----------ceeeeEEEEEEEEEECC---CCCC----ChHHeeEEEEEeHHHHHHHHHhccCCCce
Confidence 11 112111100 00 01122445554321 1111 3468999999999999887542 1
Q ss_pred ChHHHHHHHHHHHH
Q 030956 139 KRPTYEEVMRTFRP 152 (168)
Q Consensus 139 ~~~~~~~~l~~l~~ 152 (168)
..+.++.++..+..
T Consensus 212 ftp~~~~i~~~~l~ 225 (246)
T 2pny_A 212 VTPWLRTIAERFLY 225 (246)
T ss_dssp BCHHHHHHHHHTHH
T ss_pred ECHhHHHHHHHHHH
Confidence 23445555555433
No 70
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.63 E-value=2.4e-16 Score=114.57 Aligned_cols=105 Identities=16% Similarity=0.174 Sum_probs=67.7
Q ss_pred eeCCcEEEEEecCCCCcEEcCccccCCCC-CHHHHHHHHHHHhhCCccceeee-ecCC--ceeecCCcccccccccccCC
Q 030956 13 IYLGQIFVASRLNVPGAWQMPQGGIEDGE-DPKLAAMRELREETGIVSAEIIA-EVPN--WLTYDFPPAVKTKVNRLWGG 88 (168)
Q Consensus 13 ~~~~~vLl~~r~~~~g~w~lP~G~ie~~E-~~~eaa~RE~~EEtGi~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~ 88 (168)
..++++||.+|. +|.|.+|||+++.|| |+.+||.||++||||+.+..... .... ...+.++ .
T Consensus 53 ~~~~~vLl~~r~--~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~--~---------- 118 (212)
T 1u20_A 53 PIRRVLLMMMRF--DGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP--Q---------- 118 (212)
T ss_dssp ECCEEEEEEEET--TSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT--S----------
T ss_pred ecCCEEEEEEeC--CCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC--C----------
Confidence 446689999884 589999999999999 99999999999999999643210 0011 1122222 0
Q ss_pred ccccceEEEEEEEEccCCccc----ccCCCCCCcccceeeEeChhHHHhh
Q 030956 89 EWHGQAQKWFLMKLTNDESEI----NLANGEADPEFAEWKWASPEEVVEQ 134 (168)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~E~~~~~W~~~~e~~~~ 134 (168)
....++|.+......... ......+..|..++.|+|++++.+.
T Consensus 119 ---~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 119 ---KCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp ---CEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred ---cEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 122467777654322111 0011123457888999999999664
No 71
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.58 E-value=1.8e-14 Score=109.33 Aligned_cols=41 Identities=29% Similarity=0.462 Sum_probs=38.6
Q ss_pred cEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCCc
Q 030956 17 QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIV 58 (168)
Q Consensus 17 ~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi~ 58 (168)
+|||++|.. .|.|.+|||+++.||++.+||+||++||||+.
T Consensus 140 ~vLl~~r~~-~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~ 180 (292)
T 1q33_A 140 QFVAIKRKD-CGEWAIPGGMVDPGEKISATLKREFGEEALNS 180 (292)
T ss_dssp EEEEEECTT-TCSEECCCEECCTTCCHHHHHHHHHHHHHSCG
T ss_pred EEEEEEecC-CCcEeCCCcccCCCCCHHHHHHHHHHHHhCCc
Confidence 599999887 48999999999999999999999999999998
No 72
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.57 E-value=3.3e-14 Score=107.78 Aligned_cols=119 Identities=21% Similarity=0.243 Sum_probs=75.2
Q ss_pred eeeeeEEEEEeeCC---cEEEEEecC----CCCcE-EcCccccCCCCCHHHHHHHHHHHhhCCccceee--eecCCceee
Q 030956 3 YAECSVLSMLIYLG---QIFVASRLN----VPGAW-QMPQGGIEDGEDPKLAAMRELREETGIVSAEII--AEVPNWLTY 72 (168)
Q Consensus 3 ~r~~~~~~v~~~~~---~vLl~~r~~----~~g~w-~lP~G~ie~~E~~~eaa~RE~~EEtGi~~~~~~--~~~~~~~~~ 72 (168)
.++.+.+.+++.++ ++|+.+|+. +||+| .+|+|+++.||++.+||+||+.||+|+....+. ...+ .+++
T Consensus 117 ~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g-~i~y 195 (300)
T 3dup_A 117 RAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVG-AITY 195 (300)
T ss_dssp CEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEE-EEEE
T ss_pred EEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhccccc-eEEE
Confidence 34455555555555 899999984 57999 599999999999999999999999999853211 1111 1222
Q ss_pred cCCcccccccccccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhccc
Q 030956 73 DFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVD 137 (168)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~ 137 (168)
.+.... | +.....++|.+.+..+ .... .+.+|+.+++|+|++++.+++..
T Consensus 196 ~~~~~~---------G-~~~E~~~vy~~~l~~~-~~p~----~~~~EV~~~~~v~~~El~~~l~~ 245 (300)
T 3dup_A 196 CMESPA---------G-IKPDTLFLYDLALPED-FRPH----NTDGEMADFMLWPAAKVVEAVRT 245 (300)
T ss_dssp EEEETT---------E-EEEEEEEEEEEECCTT-CCCC----CTTSSEEEEEEEEHHHHHHHHHH
T ss_pred EEecCC---------C-eEEEEEEEEEEEecCC-CcCC----CCchHhheEEEECHHHHHHHHhc
Confidence 221100 0 1122233444444322 1111 24569999999999999988753
No 73
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.53 E-value=7e-14 Score=102.63 Aligned_cols=58 Identities=24% Similarity=0.379 Sum_probs=47.6
Q ss_pred eeeeeEEEEEeeC--C--cEEEEEecCC----CCcEEcCccccCCCCC--------------------HHHHHHHHHHHh
Q 030956 3 YAECSVLSMLIYL--G--QIFVASRLNV----PGAWQMPQGGIEDGED--------------------PKLAAMRELREE 54 (168)
Q Consensus 3 ~r~~~~~~v~~~~--~--~vLl~~r~~~----~g~w~lP~G~ie~~E~--------------------~~eaa~RE~~EE 54 (168)
.|++++++++... + +|||++|... +|.|.||||+++.+|+ +..||+||++||
T Consensus 7 ~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 7 IRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 4667676666652 3 7999999863 5899999999999986 589999999999
Q ss_pred hCCccc
Q 030956 55 TGIVSA 60 (168)
Q Consensus 55 tGi~~~ 60 (168)
||+.+.
T Consensus 87 ~Gl~l~ 92 (232)
T 3qsj_A 87 IGWLLA 92 (232)
T ss_dssp HSCCCS
T ss_pred hCceec
Confidence 999853
No 74
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.51 E-value=8.9e-15 Score=106.58 Aligned_cols=101 Identities=17% Similarity=0.146 Sum_probs=63.2
Q ss_pred CcEEEEEecCCCCcEEcCccccCCCC-CHHHHHHHHHHHhhCCcccee-eeecCCceeecCCcccccccccccCCccccc
Q 030956 16 GQIFVASRLNVPGAWQMPQGGIEDGE-DPKLAAMRELREETGIVSAEI-IAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQ 93 (168)
Q Consensus 16 ~~vLl~~r~~~~g~w~lP~G~ie~~E-~~~eaa~RE~~EEtGi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (168)
+++|+..|. +|.|++|||+++.|| ++.+||.||++||||+.+... ...+....++.... ...
T Consensus 65 ~~~ll~~r~--~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~--------------~~~ 128 (217)
T 2xsq_A 65 YAILMQMRF--DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSG--------------PRV 128 (217)
T ss_dssp EEEEEEEET--TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSS--------------SSE
T ss_pred CcEEEEEcc--CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCCC--------------CeE
Confidence 356666665 489999999999999 999999999999999996421 11222222211100 012
Q ss_pred eEEEEEEEEccCCcc-c---ccCCCCCCcccceeeEeChhHHH
Q 030956 94 AQKWFLMKLTNDESE-I---NLANGEADPEFAEWKWASPEEVV 132 (168)
Q Consensus 94 ~~~~~~~~~~~~~~~-~---~~~~~~~~~E~~~~~W~~~~e~~ 132 (168)
..++|.+.+...... . .........|..++.|+|++++.
T Consensus 129 ~~~~f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 129 VAHFYAKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp EEEEEEEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred EEEEEEEEeccccceecccccccccccCCceeeEEEEEHHHhh
Confidence 346677776533210 0 00011234588999999999986
No 75
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.30 E-value=1.4e-11 Score=94.37 Aligned_cols=105 Identities=11% Similarity=0.141 Sum_probs=67.1
Q ss_pred eeEEEEEeeCCcEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhh-CCccceeeeecCCceeecCCccccccccc
Q 030956 6 CSVLSMLIYLGQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREET-GIVSAEIIAEVPNWLTYDFPPAVKTKVNR 84 (168)
Q Consensus 6 ~~~~~v~~~~~~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEt-Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (168)
.++.+++.++|+|||+ .+ .| |.||||.+ +++..++|+||++||| |+.+. +...++. ++....
T Consensus 184 ~~vgaii~~~g~vLL~--~~-~G-W~LPG~~~--~~~~~~~a~RE~~EEttGl~v~-~~~L~~v-~~~~~~--------- 246 (321)
T 3rh7_A 184 IRLGAVLEQQGAVFLA--GN-ET-LSLPNCTV--EGGDPARTLAAYLEQLTGLNVT-IGFLYSV-YEDKSD--------- 246 (321)
T ss_dssp EEEEEEEESSSCEEEB--CS-SE-EBCCEEEE--SSSCHHHHHHHHHHHHHSSCEE-EEEEEEE-EECTTT---------
T ss_pred ceEEEEEEECCEEEEe--eC-CC-ccCCcccC--CCChhHHHHHHHHHHhcCCEEe-eceEEEE-EEcCCC---------
Confidence 4466778889999999 33 47 99998755 4444569999999997 99963 2222221 111111
Q ss_pred ccCCccccceEEEEEEEEccCCcccccCCCCCCcccceeeEeChhHHHhhcccCChHHHHHHHHH
Q 030956 85 LWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRT 149 (168)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~ 149 (168)
.+...+|.++..... ..+++||+++++....+. .+..+.+|+.
T Consensus 247 -------~~~~i~f~~~~~~g~-------------~~e~~~f~~~elp~~~~~--~~~~~~~L~~ 289 (321)
T 3rh7_A 247 -------GRQNIVYHALASDGA-------------PRQGRFLRPAELAAAKFS--SSATADIINR 289 (321)
T ss_dssp -------CCEEEEEEEEECSSC-------------CSSSEEECHHHHTTCEES--SHHHHHHHHH
T ss_pred -------ceEEEEEEEEeCCCC-------------eeeeEEECHHHCCCcccC--CHHHHHHHHH
Confidence 122357777775321 377899999999987542 3444444443
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.17 E-value=1e-10 Score=83.19 Aligned_cols=52 Identities=15% Similarity=0.204 Sum_probs=42.6
Q ss_pred eeeeEEEEEee-CC--cEEEEEecCCCCcEEcCccccCCCCCHHHHHHHHHHHhhCC
Q 030956 4 AECSVLSMLIY-LG--QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGI 57 (168)
Q Consensus 4 r~~~~~~v~~~-~~--~vLl~~r~~~~g~w~lP~G~ie~~E~~~eaa~RE~~EEtGi 57 (168)
|+.+.++++.+ .+ +||++++.. +.|.+|||+++.||+..+|+.||+.||+|+
T Consensus 58 R~sV~avil~~~~~~phVLLlq~~~--~~f~LPGGkle~gE~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 58 RRTVEGVLIVHEHRLPHVLLLQLGT--TFFKLPGGELNPGEDEVEGLKRLMTEILGR 112 (208)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEET--TEEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred ceEEEEEEEEcCCCCcEEEEEEcCC--CcEECCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 34445455544 34 599999865 799999999999999999999999999995
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.12 E-value=5.4e-11 Score=83.72 Aligned_cols=38 Identities=18% Similarity=0.237 Sum_probs=33.4
Q ss_pred EEEEEecCCCCcEEcCccccCCCC-CHHHHHHHHHHHhhCC
Q 030956 18 IFVASRLNVPGAWQMPQGGIEDGE-DPKLAAMRELREETGI 57 (168)
Q Consensus 18 vLl~~r~~~~g~w~lP~G~ie~~E-~~~eaa~RE~~EEtGi 57 (168)
+||..|.+ |.|+||||++|.|| |+++|+.||+.||+|+
T Consensus 46 iLmQ~R~~--G~weFPGGkVe~gE~t~e~aL~REl~EElg~ 84 (214)
T 3kvh_A 46 VLMQMRFD--GLLGFPGGFVDRRFWSLEDGLNRVLGLGLGC 84 (214)
T ss_dssp EEEEEETT--SCEECSEEEECTTTCCHHHHHHHSCCSCC--
T ss_pred EEEeeeeC--CEEeCCCccCCCCCCCHHHHHHHHHHHhhCC
Confidence 77777765 99999999999999 9999999999999997
No 78
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=36.51 E-value=85 Score=20.23 Aligned_cols=22 Identities=18% Similarity=0.061 Sum_probs=19.4
Q ss_pred CCCCCHHHHHHHHHHHhhCCcc
Q 030956 38 EDGEDPKLAAMRELREETGIVS 59 (168)
Q Consensus 38 e~~E~~~eaa~RE~~EEtGi~~ 59 (168)
+.|+++.+...+|+.+-+|.++
T Consensus 96 rdg~~L~~~L~~el~~~~g~~v 117 (129)
T 3t3l_A 96 HDGVSLHELLAAELTKALKTKL 117 (129)
T ss_dssp TTCCBHHHHHHHHHHHHHTSCC
T ss_pred CCCchHHHHHHHHHHHHhCCce
Confidence 3578999999999999999875
No 79
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=35.91 E-value=29 Score=22.97 Aligned_cols=47 Identities=6% Similarity=-0.012 Sum_probs=37.8
Q ss_pred cceeeEeChhHHHhhcccCChHHHHHHHHHHHHHHhhcCcccccccCCC
Q 030956 120 FAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNENGIAAKCKSAKW 168 (168)
Q Consensus 120 ~~~~~W~~~~e~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~~~ 168 (168)
...+--+|+..+-..+.+ +....+++..+...|...+-...+.+++|
T Consensus 73 ~~~ivlYPyAHLSs~La~--P~~A~~iL~~le~~L~~~g~eV~raPFGw 119 (143)
T 2hl0_A 73 AENVFVYPFAHLSSELAK--PSVAMDILNRVYQGLKERGFNVGKAPFGY 119 (143)
T ss_dssp CCEEEEEECGGGCSSBCC--HHHHHHHHHHHHHHHHHTTCEEEECCSSE
T ss_pred CCEEEEeccccccCccCC--hHHHHHHHHHHHHHHHhCCCeEEEeCCcc
Confidence 345567777777766654 88899999999999999888888888887
No 80
>2drn_C 24-residues peptide from AN A-kinase anchoring protein; AKAP, PKA, signal transduction, 4-helix bundle, helix- loop-helix; NMR {Rattus norvegicus}
Probab=27.72 E-value=44 Score=14.91 Aligned_cols=10 Identities=30% Similarity=-0.031 Sum_probs=7.8
Q ss_pred CHHHHHHHHH
Q 030956 42 DPKLAAMREL 51 (168)
Q Consensus 42 ~~~eaa~RE~ 51 (168)
+++|+|.|.+
T Consensus 2 sIEEaA~RIV 11 (26)
T 2drn_C 2 LIEEAASRIV 11 (26)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 6788888866
No 81
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=22.09 E-value=47 Score=17.72 Aligned_cols=13 Identities=31% Similarity=0.386 Sum_probs=9.4
Q ss_pred CHHHHHHHHHHHh
Q 030956 42 DPKLAAMRELREE 54 (168)
Q Consensus 42 ~~~eaa~RE~~EE 54 (168)
|-.=.|+||++|-
T Consensus 39 SdF~~aVREVYEh 51 (53)
T 1zl8_A 39 SEFFGAVREVYET 51 (53)
T ss_dssp CSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4455789999884
Done!